BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004813
         (729 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224122828|ref|XP_002318926.1| predicted protein [Populus trichocarpa]
 gi|222857302|gb|EEE94849.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/725 (59%), Positives = 553/725 (76%), Gaps = 2/725 (0%)

Query: 5   LSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPD 64
           LS  T+S  I KW+NL S ISS+SC N I ++ E +   +   TD++AKIQSLR+ L PD
Sbjct: 2   LSPSTLSKTIPKWLNLKSFISSVSCTNAIQINPEINQ-NAPNITDFDAKIQSLRNKLCPD 60

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +LI+VL +T+D++SA+K+FKW S+Q+RF HT DTY  +I KLG+A NVEEMEG CQNMVK
Sbjct: 61  YLIKVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVK 120

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           +R P V + L+SLV +FV + R+N A+RVL NMN  G K S+DVFN VLGA+VEEKRGF 
Sbjct: 121 DRCPGVEDVLLSLVDAFVRNCRLNEALRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQ 180

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D VFVYKEMVKAG+ P++DTLNYLLEVLFET+R++SALDQ+RR++KKGC PNSRTFEIVI
Sbjct: 181 DVVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCIPNSRTFEIVI 240

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           KGLIA +RVDDSV+IL EM +LG   EL F+   I + C E++L++ IRLF+ M+  +  
Sbjct: 241 KGLIAKNRVDDSVTILHEMLELGCLPELRFFRSTILLFCGEDRLQQGIRLFRKMKDSNFT 300

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD   Y  LI CLC++LRLD+A ++LE+M+   LTP ++VFVDIV G C++GK +E++  
Sbjct: 301 PDPFIYGALIQCLCKHLRLDEAANLLEEMMESRLTPDNNVFVDIVNGFCKLGKINEAIKL 360

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           LEDK  +VTSPHNALL CCC+A KFF+AK +LEKM++R I DCDSWNI IRWLCE   + 
Sbjct: 361 LEDKHVHVTSPHNALLRCCCDADKFFMAKGLLEKMSERNIDDCDSWNILIRWLCEKVGVM 420

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            AYELLGRM++SS++PDCATYSA V G C+L  YEDAL++F Q+ A+  +LD  SYS+L+
Sbjct: 421 NAYELLGRMIISSLIPDCATYSALVAGNCRLSKYEDALQLFLQLHAKFWILDPASYSELI 480

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           EGLC+ EK  EAV+VFC MS+N CSL S SFN+LI G+C M  +++A+RL+ L Y+SGTS
Sbjct: 481 EGLCRGEKYLEAVKVFCYMSENRCSLQSLSFNMLIEGVCNMGMLNEAVRLQLLGYNSGTS 540

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
            + +T   IMLGL K  + K +L  L+QMLV+G  LD+EAYCILIQSM  Q ++KDC LF
Sbjct: 541 CSNATCNYIMLGLSKSDKGKHMLAFLSQMLVQGTNLDMEAYCILIQSMIAQKQIKDCTLF 600

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            NVMV  GLVPD +T+  LL  LA+ SQL+L+S  ++KLVSD EVLDS+MYNILINGLWK
Sbjct: 601 LNVMVNEGLVPDSDTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAMYNILINGLWK 660

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAE 724
           EG  ++A  LLDLML KGWVPD+ THGLL+GS   E     +  +   S  DSVSDIL E
Sbjct: 661 EGNKNEAHRLLDLMLEKGWVPDSMTHGLLIGSGNREGTGKGKLTY-VDSIKDSVSDILVE 719

Query: 725 GLGNT 729
           GLG T
Sbjct: 720 GLGET 724


>gi|224124330|ref|XP_002329996.1| predicted protein [Populus trichocarpa]
 gi|222871421|gb|EEF08552.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/725 (59%), Positives = 548/725 (75%), Gaps = 1/725 (0%)

Query: 5   LSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPD 64
           LS  T   +I KWVNL + ISS+SC NTI ++ E +   +    D++ KIQSLR+ L PD
Sbjct: 2   LSPSTFLKRIPKWVNLKAFISSVSCTNTIQINPEINQ-NTPNFPDFDVKIQSLRNKLYPD 60

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +LI+VL +T+D++SA+KIFKW ++Q++F HTADTY  +I KLG+AGNVEEMEG CQNMVK
Sbjct: 61  NLIKVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVK 120

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           ER     + L+SLV +FV + R+N AMRVL NMN  G K S+DVFN VLGA+VEEKRGF 
Sbjct: 121 ERCTGEEDVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQ 180

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D VFVYKEMVKAG+ P++DTLNYLLEVLFET+R++SALDQ+RR++KKGC P+ +TFEIVI
Sbjct: 181 DVVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCRPDGKTFEIVI 240

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           KGLIAN RVDDSVSIL EM +LG   ELSFY   IP+ CRE++LEE IRLF+ M+  +  
Sbjct: 241 KGLIANDRVDDSVSILHEMLELGCLPELSFYRTTIPLFCREDRLEEGIRLFRKMKESNFT 300

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD   Y  LI CLC+ LRLD+A ++LE+M+   L   ++VFVD+V G C++GK +E+V  
Sbjct: 301 PDSFIYGALIQCLCKQLRLDEAVNLLEEMMESQLEGDNNVFVDVVNGFCKLGKINEAVKL 360

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           LEDK    TSPHNALL CCC+A KF +AK +LEKM++R I DCDSWNI IRWLCE EE+ 
Sbjct: 361 LEDKHVLETSPHNALLRCCCDADKFLMAKGLLEKMSERNIDDCDSWNILIRWLCEREEMV 420

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           KAYELLGRM++SS++PD ATYSA V G C+L  YEDAL++F Q+ A+  +LD  SYS+L+
Sbjct: 421 KAYELLGRMIISSLIPDYATYSALVAGNCRLSKYEDALQLFLQLHAKCWILDPASYSELI 480

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           EGLC+ EK  EAV+VFC MS+N CSL S  F +LI G+C M  + +A+RL+SLAY+SGTS
Sbjct: 481 EGLCRGEKYLEAVKVFCYMSENRCSLQSLPFIMLIKGICDMGMIGEAVRLQSLAYNSGTS 540

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
              +TY  +ML L K ++ + +L  L++MLV+G  L+ EAYCILIQS+  QN++KDC++F
Sbjct: 541 CVNATYNYVMLRLSKSEQGRHVLAFLSRMLVQGGNLNTEAYCILIQSLIAQNRIKDCSMF 600

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            NVM+  GLVPD +T+ +LL  LA  SQL+L+S  ++KL SD EVLDS+MYNILING+WK
Sbjct: 601 LNVMINKGLVPDSDTLYNLLSCLAKHSQLYLISVSLDKLASDCEVLDSAMYNILINGMWK 660

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAE 724
           EG  + A  LLDLML KGWVPDA THGLL+GS+  EE      A+   S  D V DILAE
Sbjct: 661 EGNKNDARRLLDLMLEKGWVPDAMTHGLLIGSADMEEKGEGMLAYVDLSTKDGVGDILAE 720

Query: 725 GLGNT 729
           GLG T
Sbjct: 721 GLGET 725


>gi|225450452|ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/730 (57%), Positives = 532/730 (72%), Gaps = 1/730 (0%)

Query: 1   MAIKLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQT-TDYEAKIQSLRH 59
           MA+KLSSLT+S++I KWV L + +SS+SCAN I    E D  K+     ++E K Q LR+
Sbjct: 1   MAVKLSSLTLSSRIPKWVPLIASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
            L PD LIRVLD T+DL+SA+K+FKW S QKRF+HTADTY ++ILKLG+ G +E+ME  C
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFC 120

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
             MV+E+ P   E LI+L+ SFV H R++ A+RVLV M S G+K S+  FN +LGA+V E
Sbjct: 121 SEMVREKCPGGEETLIALISSFVKHRRLSEAIRVLVIMTSNGYKFSIIEFNGLLGALVRE 180

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           +R F + + VYKE+VKAGIVPNVDTLNYL+E LFE N I+ ALDQ+RRM KKGC PNS+T
Sbjct: 181 RRDFREILLVYKEIVKAGIVPNVDTLNYLIEALFELNWIDLALDQYRRMSKKGCSPNSKT 240

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F+I+I GLIA + V+ SV +LGEM +L  + +LSFYT +IP+ C  +++EE + LF  MR
Sbjct: 241 FDILISGLIARNLVEKSVVVLGEMIELECEADLSFYTSVIPLFCSVHQVEEGMMLFWRMR 300

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           A  L+PD L Y  LI CL E+L LDDA ++LE+MI  GLTP DDVFV IV+G C++GKF+
Sbjct: 301 ASKLVPDLLIYRVLIQCLSESLWLDDAINLLEEMIGCGLTPEDDVFVYIVKGFCKLGKFN 360

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
           E+  FL+DKC + T PHNALLE  C AG F  AK  LEK+ DR I D  SWNI +RWLCE
Sbjct: 361 EAEFFLKDKCVFGTDPHNALLEGYCTAGDFHGAKVFLEKIFDRNIIDNFSWNILVRWLCE 420

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N    KA+ELL RM+VSS  PD ATYSA V+G CKL   +D L +F QV +++ VLDS S
Sbjct: 421 NAWTSKAFELLSRMIVSSFTPDSATYSALVIGNCKLSKCKDGLELFHQVCSKNWVLDSAS 480

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y++LVE LCQ+E+I EA EVFC MS NGC+L SSS ++L+ G+CV  KVD+AIRL  LA 
Sbjct: 481 YAELVETLCQMERIQEAAEVFCYMSSNGCALKSSSLDMLMKGICVTGKVDEAIRLLVLAC 540

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            SGTS T ++Y  IMLGL KL +  D+LVVL++MLVEGC LDVEAYCIL+QSM   ++ +
Sbjct: 541 YSGTSCTNASYKAIMLGLSKLGKDSDILVVLSKMLVEGCILDVEAYCILVQSMCALSRTE 600

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           D A FFN+MV  GLVPD ET+ +LL  L   SQLH + + I KL SD E+L+SSMYN+LI
Sbjct: 601 DIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLI 660

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            GL KEG  S+A  LLDLML KGWVPDA+THGLL+GS V E        +++S   D + 
Sbjct: 661 IGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQDKIG 720

Query: 720 DILAEGLGNT 729
           +ILAEGL  T
Sbjct: 721 NILAEGLRET 730


>gi|147780248|emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/730 (57%), Positives = 529/730 (72%), Gaps = 1/730 (0%)

Query: 1   MAIKLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQT-TDYEAKIQSLRH 59
           MA+KLSSLT+S +I KWV L + +SS+S AN I    E D  K+     ++E K Q LR+
Sbjct: 1   MAVKLSSLTLSRRIPKWVPLIASMSSISSANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
            L PD LIRVLD T+DL+SA+K+FKW S QKRF+HTADTY ++ILKLG+ G +E+ME  C
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFC 120

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
             MV+E+ P   E LI+L+ SFV H R++ A+RVLV M S G+K S+  FN +LGA+V E
Sbjct: 121 SEMVREKCPGGEETLIALISSFVKHRRLSEAIRVLVIMTSNGYKFSIIEFNGLLGALVRE 180

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           +R F + + VYKE+VKAGIVPNVDTLNYL+E LFE N I+ ALDQ+RRM KKGC PNS+T
Sbjct: 181 RRDFREILLVYKEIVKAGIVPNVDTLNYLIEALFELNWIDLALDQYRRMSKKGCSPNSKT 240

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F+I+I GLIA + V+ SV +LGEM +L  + +LSFYT +IP+ C  +++EE + LF  MR
Sbjct: 241 FDILISGLIARNLVEKSVVVLGEMIELECEADLSFYTSVIPLFCSVHQVEEGMMLFWRMR 300

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           A  L+PD L Y  LI CL E+L LDDA ++LE+MI  GLTP DDVFV IV+G C++GKF+
Sbjct: 301 ASKLVPDLLIYRVLIQCLSESLWLDDAINLLEEMIGCGLTPEDDVFVYIVKGFCKLGKFN 360

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
           E+  FL+DKC + T PHNALLE  C AG F  AK  LEK+ DR I D  SWNI +RWLCE
Sbjct: 361 EAEFFLKDKCVFGTDPHNALLEGYCTAGDFHGAKVFLEKIFDRNIIDNFSWNILVRWLCE 420

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N    KA+ELL RM+VSS  PD ATYSA V+G CKL   +D L +F QV +++ VLDS S
Sbjct: 421 NAWTSKAFELLSRMIVSSFTPDSATYSALVIGNCKLSKCKDGLELFHQVCSKNWVLDSAS 480

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y++LVE LCQ+E+I EA EVFC MS N C+L SSS ++L+ G+CV  KVD+AIRL  LA 
Sbjct: 481 YAELVETLCQMERIQEAAEVFCYMSSNRCALKSSSLDMLMKGICVTGKVDEAIRLLVLAC 540

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            SGTS T ++Y  IMLGL KL +  D+LVVL++MLVEGC LDVEAYCIL+QSM   ++ +
Sbjct: 541 YSGTSCTNASYKAIMLGLSKLGKDSDILVVLSKMLVEGCILDVEAYCILVQSMCALSRTE 600

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           D A FFN+MV  GLVPD ET+ +LL  L   SQLH + + I KL SD E+L+SSMYN+LI
Sbjct: 601 DIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLI 660

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            GL KEG  S+A  LLDLML KGWVPDA+THGLL+GS V E        +++S   D + 
Sbjct: 661 IGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQDKIG 720

Query: 720 DILAEGLGNT 729
           +ILAEGL  T
Sbjct: 721 NILAEGLRET 730


>gi|255543026|ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548537|gb|EEF50028.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 739

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/725 (55%), Positives = 534/725 (73%), Gaps = 1/725 (0%)

Query: 5   LSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPD 64
           LS LT+S +I +WVNL S + S+SC ++I ++ E D      TTD++AKI  LR+ L PD
Sbjct: 16  LSPLTLSKRISRWVNLNSALFSVSCTSSIQINPEIDQ-SILNTTDFDAKIHILRNKLYPD 74

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
            LI+VL +T+D++SA+KIFKW S+QKRF HT+DTY  +ILKLGLAGN++EMEG CQN VK
Sbjct: 75  SLIKVLQSTSDINSAVKIFKWASLQKRFNHTSDTYFWIILKLGLAGNLKEMEGFCQNWVK 134

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           +    V  A+ SL+ SFV H+R+N A+ +LVN+  GG+K S++VFN++LGA+VE+K+GF 
Sbjct: 135 DGCSGVEHAVFSLIASFVRHHRLNEAICILVNLCLGGYKPSINVFNMILGALVEDKKGFK 194

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           + VFVYKEMVKAG+ P +DTLN+L+EVLF+T R++SALDQ+RRM+KKGC  NSRTF+IVI
Sbjct: 195 EVVFVYKEMVKAGVAPTIDTLNHLMEVLFDTGRVDSALDQYRRMNKKGCSRNSRTFQIVI 254

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           KGLI N++VD+S++IL EM ++G   ELSFYTCIIP LCRE+K EEAIRLF+MMRA   +
Sbjct: 255 KGLIVNNQVDESIAILHEMLNIGCLPELSFYTCIIPELCREHKSEEAIRLFRMMRASKFV 314

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ + Y  LI C C+NL+LDDA ++LE+M+   LTP +DV +D+V   C +GK +E+  F
Sbjct: 315 PNSVIYGALIQCFCKNLQLDDAVNLLEEMVESCLTPDNDVVIDVVIAFCRLGKTNEAAKF 374

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           LED     TSP+N LL  CC+AGKF  AK +LEKM++R +ADCDSWNI IR LCE   IR
Sbjct: 375 LEDINVLETSPYNTLLGACCDAGKFIEAKGLLEKMSERSLADCDSWNILIRCLCEKAAIR 434

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           KA ELLGRM++SS+VP+ ATYSA VLG C+L   EDAL++F Q+  +  +LD +SYS+L+
Sbjct: 435 KASELLGRMIISSLVPNRATYSALVLGHCRLNKCEDALQLFLQLCTKCWILDYVSYSELI 494

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           EGLC+  K  EA EVF  M  NGC     SF+ LI G+C    VDKA++L+ +A+  G  
Sbjct: 495 EGLCEAGKHLEATEVFHYMFMNGCLPQYLSFSKLIKGICEKGMVDKAVKLQQMAHDFGMC 554

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
              +TY  IMLGL K  + +++LV L+QMLV+GC +D EAYCILI+SM  Q++ KD ALF
Sbjct: 555 CANATYNSIMLGLSKSDKGRNVLVFLSQMLVKGCNVDAEAYCILIKSMIAQDQEKDSALF 614

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           FN MV  GL PD +T+  LL  LA+ S+L+L+ + I+KL+ +SEVLDS MYNIL+ G WK
Sbjct: 615 FNAMVNEGLKPDSDTLHKLLSYLANRSRLYLILATIDKLILNSEVLDSGMYNILVYGFWK 674

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAE 724
           E L ++   LLD ML KGWVPDA TH LL+GS  GEE + +    +  +  D V DILAE
Sbjct: 675 ERLKNEGRRLLDFMLEKGWVPDAATHRLLMGSVEGEESNEKMAIREKFTINDGVLDILAE 734

Query: 725 GLGNT 729
           GL  T
Sbjct: 735 GLSET 739


>gi|356574070|ref|XP_003555175.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 720

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/731 (51%), Positives = 512/731 (70%), Gaps = 13/731 (1%)

Query: 1   MAIKLSSLTISNKIIKWVNLTS-CISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRH 59
           MAIKL S     + ++WV L+S CI+ +S            ++K   +++++  +  L++
Sbjct: 1   MAIKLPSSAHPTRFLRWVYLSSSCIADIS--------ETPGILKPKDSSEFDQNLNFLKN 52

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
            L+PD+LIR LD T+DL+SA++IFKW S QK F HT++TY ++ILKLG+AG V EM   C
Sbjct: 53  KLAPDNLIRALDRTSDLNSAVRIFKWASRQKSFHHTSNTYFRIILKLGMAGKVLEMRDFC 112

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-E 178
           + MVK+R P   EAL++LV +FV H+R+  A+ VLVNMN GG++  ++VFNV+LGA+V  
Sbjct: 113 EYMVKDRCPGAEEALVALVHTFVGHHRIKEAIAVLVNMNLGGYRPPIEVFNVLLGALVGR 172

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           E R F   +FVYKEMVKA ++P VDTLNYLLEVLF TNR E AL QFRRM+ KGC PNS+
Sbjct: 173 ESRDFQSALFVYKEMVKACVLPTVDTLNYLLEVLFATNRNELALHQFRRMNNKGCDPNSK 232

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TFEI++KGLI + +VD++ ++L +M     Q +L FYTCIIP+ CRENK+EEA++LFKMM
Sbjct: 233 TFEILVKGLIESGQVDEAATVLEQMLKHKCQPDLGFYTCIIPLFCRENKVEEAVKLFKMM 292

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +  D +PD   YE L+ C C NL+LD A  ++ +MI IG+ P  +V VD++   CE+GK 
Sbjct: 293 KDSDFVPDSFIYEVLVRCFCNNLQLDSAVSLINEMIEIGMPPKHNVLVDMMNCFCELGKI 352

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
           +E++ FLED   + T+P N LLE CCNAG+   A  +LE M++R IADC SWNI IRWLC
Sbjct: 353 NEAIMFLEDTQVHETAPFNTLLEGCCNAGEVLAANVLLETMSERNIADCQSWNILIRWLC 412

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           ENEE  KAY LLGRM+ S V+ D ATYSA V+GKC+L  YE+A+ +F Q+ A+  VLD  
Sbjct: 413 ENEETNKAYILLGRMIKSFVILDHATYSALVVGKCRLGKYEEAMELFHQIYARCWVLDFA 472

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           SYS+LV GL  ++   +A+EVF  MS   CSL S SF  LI  +C   +V++AIRL  LA
Sbjct: 473 SYSELVGGLSDIKHSQDAIEVFHYMSMKRCSLHSLSFYKLIKCVCDSGQVNQAIRLWQLA 532

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
           Y  G S   +T+T IM  L K +RA+DLL  L+QML+ G  LD+EAYCIL QSMS+ NK+
Sbjct: 533 YFCGISCCIATHTTIMRELSKSRRAEDLLAFLSQMLMVGSNLDLEAYCILFQSMSKHNKV 592

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           K+C LFFN+MV  GL+PD + +   L  +A+ SQL ++ S I++ +SD ++L+ +M+ +L
Sbjct: 593 KECVLFFNMMVHEGLIPDPDRLFDQLSFIANHSQLSMIPSAIDR-ISDGDILNPAMFGLL 651

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSV 718
           I  L KEG   +A  LLDLML KGW+PDATTH LL+GS V E   S+   FD+S+  DSV
Sbjct: 652 ITALLKEGKEHEARRLLDLMLEKGWLPDATTHNLLIGSDVRER--SQAMLFDNSASLDSV 709

Query: 719 SDILAEGLGNT 729
           S ILAEGLG+ 
Sbjct: 710 SYILAEGLGDA 720


>gi|449437884|ref|XP_004136720.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Cucumis sativus]
 gi|449501182|ref|XP_004161300.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Cucumis sativus]
          Length = 728

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 336/731 (45%), Positives = 479/731 (65%), Gaps = 5/731 (0%)

Query: 1   MAIKLSSLTISNKIIKWVNLTSCISSLSCANTIP--LSSETDMIKSHQTTDYEAKIQSLR 58
           MA +L   T+  K +K V   SC+S +     +   L +  +  +  Q+T +   +    
Sbjct: 1   MAARLMPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQF---LSDKS 57

Query: 59  HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGL 118
            + +  + ++ LD   +L+S ++IFK ++IQK    +  TY + ILKLGL GN+EEME  
Sbjct: 58  VSNNSVNSVKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMT 117

Query: 119 CQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE 178
           C+++V E    V E +++LV + V   RV  A+RVL +++  G + SV+ FNVVL  +VE
Sbjct: 118 CRDLVNEGCSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVE 177

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           E R   + +FVYKEMVKAGIVPNVDTLN+LL  LF   +I++A++QFRRM KKGC PNS+
Sbjct: 178 EDRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSK 237

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TFE+++ GLI  + VD++V +LG M+ +  +L LSFYTC I + CRE++++    LF MM
Sbjct: 238 TFEVLVNGLITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMM 297

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +A +++P  L Y  LI  LC++L LD A  +LE+M+  GL P + V+V IV    E+GK 
Sbjct: 298 KASNIVPGTLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKT 357

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
           DE++ F+ED+C + TSPHNALLE C NAGK  LA CIL KM+   I DC SWNI I WLC
Sbjct: 358 DEAIKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLC 417

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            N +I  A+E LG+M+V S VP+  TY+A ++G CK   YE AL++  +V ++  +L++ 
Sbjct: 418 NNAKIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAG 477

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            YS+L+EGLCQ  +  EA EVFC MSKN   L  S F+ LI G+C +  VD+A+ L  LA
Sbjct: 478 CYSELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLA 537

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +GTS  + TY  I+  L K  +A+  L+VL+QMLV GC LD+E Y ILI S S  N++
Sbjct: 538 SYAGTSCKSVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRV 597

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           K+  L FN MV   L+PD E +  L   +A+ SQLH++S+ I+KLV+ +++++++ YN+L
Sbjct: 598 KESILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLL 657

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSV 718
           INGLWKE    +A  LLD ML KGWVPDATTHGLL+GS   E+   +    ++S+  D+V
Sbjct: 658 INGLWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNV 717

Query: 719 SDILAEGLGNT 729
           S IL EGLGN+
Sbjct: 718 SSILVEGLGNS 728


>gi|242037815|ref|XP_002466302.1| hypothetical protein SORBIDRAFT_01g005290 [Sorghum bicolor]
 gi|241920156|gb|EER93300.1| hypothetical protein SORBIDRAFT_01g005290 [Sorghum bicolor]
          Length = 699

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 287/699 (41%), Positives = 425/699 (60%), Gaps = 4/699 (0%)

Query: 28  SCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS 87
           SC ++  + +  D   S   +++++ I+SL+ NL P+ L RVLD+T+D S AL+IF+WV 
Sbjct: 4   SCPDSPSVRASADRASS---SEFDSAIRSLKDNLRPESLARVLDSTSDSSLALRIFRWVL 60

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
            Q+   HT DTY  MI +L    N +EM+ L   MV+ + P + +AL  LV    +  + 
Sbjct: 61  HQRYNIHTVDTYSCMISRLTAVENRDEMDSLLSEMVRLKVPALEQALNKLVECLSSKNQF 120

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           +  + V+   +S   KLSV   N VL  +V++ RG +  + VY E+VKAG++P+VDTLN 
Sbjct: 121 DEGLLVIQRASSAKLKLSVSACNGVLHGMVKQGRGLSLCMLVYTEIVKAGVLPDVDTLNL 180

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L+E L E+ R++ AL QF RM KK C PNS TFE++I  L ++SR D++V +  +M  L 
Sbjct: 181 LIEALCESGRLDLALIQFGRMSKKRCTPNSHTFEVLITALCSHSRADEAVKLFDKMLQLR 240

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
              + SF+  ++P+ C+ +K++EAI L +MM+  ++      Y  LI CLCEN  LDD  
Sbjct: 241 CSPDSSFHAQVMPLFCKFSKVKEAITLHRMMKEDNIQLSMQLYSALIRCLCENQLLDDTT 300

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAG 387
            + ++MI  G  P    +VD++   C  GKF  +V FLE+     + P+NALL   C   
Sbjct: 301 IVFKEMIASGHAPMASTYVDMIHCYCTKGKFHSAVRFLEENDVTESEPYNALLSWLCRND 360

Query: 388 KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           +   +   LEK+ +R   DC+SWNI I   C    IR+A EL+GRMVVSS  PD  TYSA
Sbjct: 361 RLQDSVSCLEKLHNRGFVDCESWNIVITQFCNEGNIRRASELIGRMVVSSFAPDGTTYSA 420

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   C+L  Y DAL +FR+ S  +L L+S S+S+LVE LC  ++I EA+EVF      G
Sbjct: 421 VISCYCRLGLYIDALNMFRRASISNLSLNSESFSQLVEVLCHAKRIEEAIEVFKYHYNRG 480

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           CSL++ S ++LI G C+  K+ +A++LR+LA  +GTS T STY  I+  L+ L++ KD+L
Sbjct: 481 CSLTNKSLDMLIQGSCMSGKIHEAVKLRTLAVCTGTSCTFSTYGIIIQALLHLKKGKDVL 540

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            + AQML+EGC LD  AY IL++S   +  + + A+ FN MV     PD+ET   +++ +
Sbjct: 541 TLFAQMLMEGCPLDGYAYNILLRSFLTKETIIEAAILFNRMVNHSFFPDQETFELIVNDM 600

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           A  S L++V+  + K++  S  +   +YNI+I GL KEG  S+A   LD ML KGWVPD+
Sbjct: 601 ALFSFLNMVAQSLLKVIDTSGTVSPRIYNIIIYGLIKEGFKSEACKFLDQMLEKGWVPDS 660

Query: 688 TTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGL 726
            TH +LVGSS   E      A+ +    D+V++IL E L
Sbjct: 661 RTHRVLVGSSGLVEARELVEAYQTVD-GDNVTNILLEAL 698


>gi|414873332|tpg|DAA51889.1| TPA: hypothetical protein ZEAMMB73_948978 [Zea mays]
          Length = 722

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/718 (39%), Positives = 431/718 (60%), Gaps = 10/718 (1%)

Query: 13  KIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDN 72
           +  +W  L+  +   SC ++    +  +   S   +++++ I+SL+ +L P+ L R+LD+
Sbjct: 10  RFARWHLLSGRLMYCSCPDSPSARASAERASS---SEFDSAIRSLKDSLRPESLARILDS 66

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           T+D S AL+IF+W S Q+    T DTY  MI +L +  N +EM+ L   MV+ R P + +
Sbjct: 67  TSDSSLALRIFRWASHQRYNIQTVDTYSCMISRLTVVENRDEMDSLLSEMVRLRVPALEQ 126

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           AL  LV S  +  R + A+ V+ +  S   KLSV   N VL  +V + RG   F+  Y E
Sbjct: 127 ALNKLVESLSSKNRCDEALLVIQHARSAKLKLSVSACNGVLHGMVRQGRGLRLFMLAYTE 186

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           ++KAG++P+V+ LN+L++ L E+ R++ AL QF RM+KK C PNS TFEI+I  L  +SR
Sbjct: 187 IIKAGVLPDVEALNFLIQALCESGRLDLALIQFDRMNKKRCTPNSHTFEILITALCFHSR 246

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            D++V +  +M  L    + SF+  ++P+ C+ +K++E I L ++M+  ++      Y  
Sbjct: 247 ADEAVKLFDKMLQLRCSPDSSFHAQVMPLFCKFSKVKEVITLHRIMKEGNIQLSLQLYSA 306

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+ CLCEN  LDDA  + ++M+  G  P    +VD++   C   KF  ++ FLE+     
Sbjct: 307 LVRCLCENELLDDATIVFKEMVASGHAPMAITYVDMINCYCTKSKFHNAMIFLEENGVTE 366

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
             P+N LL   C   +   +   LEK+  R   DC+SWNI I   C    IR+A+EL+GR
Sbjct: 367 LEPYNVLLTWLCRNDRLQDSVNYLEKLHSRGFVDCESWNIVITQFCNEGNIRRAFELIGR 426

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           MVVSS  PD  TYSA +   C+L +Y DAL +FR+VS  ++ L+S S+S+LVE LC  ++
Sbjct: 427 MVVSSFAPDKTTYSAVISCYCRLGSYIDALSMFRRVSISNMSLNSESFSQLVEVLCHSKR 486

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS--SGTSYTTSTY 550
           I EA+EVF      GCSL++ S ++LI G C+  K+ +A++LR+LA S  +GT  T STY
Sbjct: 487 IKEAIEVFKYHYNRGCSLTNKSLDMLIQGSCLSGKIQEAVKLRTLAVSVCTGTFCTFSTY 546

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+  L  L+  K +L + AQML+EGC LD  AY IL++S   +  + + A+ FN MV 
Sbjct: 547 DIIIQALFHLKEGKHVLALFAQMLMEGCPLDGYAYNILLRSFLTKETIIEAAILFNRMVN 606

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
               PD+ET   L++ +A  S L++V+  + K+V  S  +   MYNI+I GL KEG  S+
Sbjct: 607 HSFFPDQETFELLVNDMALFSFLNMVAQSLLKVVDASGTVSPRMYNIIIYGLIKEGFKSE 666

Query: 671 ASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRF--AFDSSSFPDSVSDILAEGL 726
           A   LD ML KGWVPD+ TH +LVGSS  + +++R    A+ +    D+V++IL EGL
Sbjct: 667 ACKFLDQMLEKGWVPDSRTHRVLVGSS--DLVEARELVEAYQTVD-GDNVANILLEGL 721


>gi|297601813|ref|NP_001051548.2| Os03g0795400 [Oryza sativa Japonica Group]
 gi|222625958|gb|EEE60090.1| hypothetical protein OsJ_12941 [Oryza sativa Japonica Group]
 gi|255674962|dbj|BAF13462.2| Os03g0795400 [Oryza sativa Japonica Group]
          Length = 728

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 277/680 (40%), Positives = 412/680 (60%), Gaps = 1/680 (0%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           ++++++ I+SLR N  P+ L  +LD+ +D + AL+IF+W S Q+   HT DTY +MI KL
Sbjct: 49  SSEFDSAIRSLRINPQPERLAHILDSASDFNLALRIFRWASYQRMPIHTVDTYARMIAKL 108

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G AGN +E+ G  + MV+   P + + +  LV       R + A+ V+ + +SG FK+SV
Sbjct: 109 GDAGNHDEIGGFLKEMVRLDVPGLEKVMNDLVQFLSGKNRFDEALLVIQHASSGNFKISV 168

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
              N VL  +V+E RG   F+  Y E+VKAG++P+V+TLN+L+EVL E   +E AL QF 
Sbjct: 169 SSCNGVLCGLVKEGRGLRPFMRAYMEVVKAGVLPDVETLNWLIEVLCEAGHLELALVQFD 228

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M KK C PNSRTF+I+I  L ++ R D+S     +M  L    + SF   ++P+ C+ N
Sbjct: 229 KMSKKRCIPNSRTFKILITALCSHGRADESADAFDKMLQLRCIPDSSFCVQVLPLFCKFN 288

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           KL+EA +L +MM+   L  D+  Y  LI CLCEN  LDDA   + DMI  G       FV
Sbjct: 289 KLKEARKLHQMMKEYKLQSDQHLYSALIRCLCENQLLDDAVTTVNDMIASGHALMRSTFV 348

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           +IV   C +G+F ++VNFLE+        +N LL   C  G+   +   L ++  R + +
Sbjct: 349 NIVDCYCTLGQFHKAVNFLEENDVAEIEAYNVLLRSLCKTGRVQDSVNYLTELHSRGLVN 408

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           C SWNI I   C N  IR+A EL+ RM+VSS   D +TYS+ V   CKL  Y++AL +FR
Sbjct: 409 CQSWNIVIAQFCNNGNIRRASELICRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFR 468

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++   +L L+S S+S+LVE LC ++KI EA EVF    K GC+L+S S  +LI   C++ 
Sbjct: 469 RLDVSNLSLNSESFSQLVESLCHMKKIQEAAEVFKYHCKRGCNLTSESLEMLIQESCMVG 528

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            + +AI++RSLA  +GTS T +TY  I   L+ L++ KD+L++ A ML+EGC L+   Y 
Sbjct: 529 MIREAIKMRSLAVCTGTSCTFTTYNTIFRALLHLKKEKDVLLLFAHMLMEGCLLNEYTYN 588

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            +++    +  + + A+ FN MVK G VPD+ET   L+  +A  S L+++S  +  +V+ 
Sbjct: 589 CILRYFLTKETIFEAAILFNRMVKDGFVPDQETFELLVPEMALSSLLNMISESLLTVVNM 648

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRR 706
             ++   + NI+I GL KEG  S+A   LD M+ KGWVPD+ TH +L+ SS G E     
Sbjct: 649 DGMMSPRISNIIIYGLIKEGFKSEACKFLDQMIEKGWVPDSRTHSILLSSS-GREEPRES 707

Query: 707 FAFDSSSFPDSVSDILAEGL 726
              + +   D+VS+IL EGL
Sbjct: 708 DEVNHTVDDDNVSNILLEGL 727


>gi|50400026|gb|AAT76414.1| putative PPR repeat containing protein [Oryza sativa Japonica
           Group]
          Length = 755

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/655 (41%), Positives = 400/655 (61%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           ++++++ I+SLR N  P+ L  +LD+ +D + AL+IF+W S Q+   HT DTY +MI KL
Sbjct: 49  SSEFDSAIRSLRINPQPERLAHILDSASDFNLALRIFRWASYQRMPIHTVDTYARMIAKL 108

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G AGN +E+ G  + MV+   P + + +  LV       R + A+ V+ + +SG FK+SV
Sbjct: 109 GDAGNHDEIGGFLKEMVRLDVPGLEKVMNDLVQFLSGKNRFDEALLVIQHASSGNFKISV 168

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
              N VL  +V+E RG   F+  Y E+VKAG++P+V+TLN+L+EVL E   +E AL QF 
Sbjct: 169 SSCNGVLCGLVKEGRGLRPFMRAYMEVVKAGVLPDVETLNWLIEVLCEAGHLELALVQFD 228

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M KK C PNSRTF+I+I  L ++ R D+S     +M  L    + SF   ++P+ C+ N
Sbjct: 229 KMSKKRCIPNSRTFKILITALCSHGRADESADAFDKMLQLRCIPDSSFCVQVLPLFCKFN 288

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           KL+EA +L +MM+   L  D+  Y  LI CLCEN  LDDA   + DMI  G       FV
Sbjct: 289 KLKEARKLHQMMKEYKLQSDQHLYSALIRCLCENQLLDDAVTTVNDMIASGHALMRSTFV 348

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           +IV   C +G+F ++VNFLE+        +N LL   C  G+   +   L ++  R + +
Sbjct: 349 NIVDCYCTLGQFHKAVNFLEENDVAEIEAYNVLLRSLCKTGRVQDSVNYLTELHSRGLVN 408

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           C SWNI I   C N  IR+A EL+ RM+VSS   D +TYS+ V   CKL  Y++AL +FR
Sbjct: 409 CQSWNIVIAQFCNNGNIRRASELICRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFR 468

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++   +L L+S S+S+LVE LC ++KI EA EVF    K GC+L+S S  +LI   C++ 
Sbjct: 469 RLDVSNLSLNSESFSQLVESLCHMKKIQEAAEVFKYHCKRGCNLTSESLEMLIQESCMVG 528

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            + +AI++RSLA  +GTS T +TY  I   L+ L++ KD+L++ A ML+EGC L+   Y 
Sbjct: 529 MIREAIKMRSLAVCTGTSCTFTTYNTIFRALLHLKKEKDVLLLFAHMLMEGCLLNEYTYN 588

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            +++    +  + + A+ FN MVK G VPD+ET   L+  +A  S L+++S  +  +V+ 
Sbjct: 589 CILRYFLTKETIFEAAILFNRMVKDGFVPDQETFELLVPEMALSSLLNMISESLLTVVNM 648

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             ++   + NI+I GL KEG  S+A   LD M+ KGWVPD+ TH +L+ SS  EE
Sbjct: 649 DGMMSPRISNIIIYGLIKEGFKSEACKFLDQMIEKGWVPDSRTHSILLSSSGREE 703


>gi|108711539|gb|ABF99334.1| expressed protein [Oryza sativa Japonica Group]
          Length = 744

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 264/655 (40%), Positives = 393/655 (60%), Gaps = 11/655 (1%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           ++++++ I+SLR N  P+ L  +LD+ +D + AL+IF+W S Q+   HT DTY +MI KL
Sbjct: 49  SSEFDSAIRSLRINPQPERLAHILDSASDFNLALRIFRWASYQRMPIHTVDTYARMIAKL 108

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G AGN +E+ G  + MV+   P + + +  LV       R + A+ V+ + +SG FK+SV
Sbjct: 109 GDAGNHDEIGGFLKEMVRLDVPGLEKVMNDLVQFLSGKNRFDEALLVIQHASSGNFKISV 168

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
              N VL  +V+E RG   F+  Y E+VKAG++P+V+TLN+L+EVL E   +E AL QF 
Sbjct: 169 SSCNGVLCGLVKEGRGLRPFMRAYMEVVKAGVLPDVETLNWLIEVLCEAGHLELALVQFD 228

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M KK C PNSRTF+I+I  L ++ R D+S     +M  L    + SF   ++P+ C+ N
Sbjct: 229 KMSKKRCIPNSRTFKILITALCSHGRADESADAFDKMLQLRCIPDSSFCVQVLPLFCKFN 288

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           KL+EA +L +MM+   L  D+  Y  LI CLCEN  LDDA   + DMI  G       FV
Sbjct: 289 KLKEARKLHQMMKEYKLQSDQHLYSALIRCLCENQLLDDAVTTVNDMIASGHALMRSTFV 348

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           +IV   C +G+F ++VNFLE+        +N LL   C  G+   +   L ++  R + +
Sbjct: 349 NIVDCYCTLGQFHKAVNFLEENDVAEIEAYNVLLRSLCKTGRVQDSVNYLTELHSRGLVN 408

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           C SWNI I   C N  IR+A EL+ RM+VSS   D +TYS+ V   CKL  Y++AL +FR
Sbjct: 409 CQSWNIVIAQFCNNGNIRRASELICRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMFR 468

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++   +L L+S S+S+LVE LC ++KI EA EVF    K GC+L+S S  +LI   C++ 
Sbjct: 469 RLDVSNLSLNSESFSQLVESLCHMKKIQEAAEVFKYHCKRGCNLTSESLEMLIQESCMVG 528

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            + +AI++RSLA  +GTS T +TY  I   L+ L++ KD+L++ A ML+EGC L+   Y 
Sbjct: 529 MIREAIKMRSLAVCTGTSCTFTTYNTIFRALLHLKKEKDVLLLFAHMLMEGCLLNEYTYN 588

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            +++    +  + + A+ FN MVK G VPD+ET   L+  +A  S L+++S  +  +V+ 
Sbjct: 589 CILRYFLTKETIFEAAILFNRMVKDGFVPDQETFELLVPEMALSSLLNMISESLLTVVNM 648

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             ++   + NI+I GL KEG              KGWVPD+ TH +L+ SS  EE
Sbjct: 649 DGMMSPRISNIIIYGLIKEGFKK-----------KGWVPDSRTHSILLSSSGREE 692


>gi|296089845|emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 206/528 (39%), Positives = 290/528 (54%), Gaps = 56/528 (10%)

Query: 24  ISSLSCANTIPLSSETDMIKSHQT-TDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKI 82
           +SS+SCAN I    E D  K+     ++E K Q LR+ L PD LIRVLD T+DL+SA+K+
Sbjct: 1   MSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRNRLMPDDLIRVLDTTHDLNSAIKV 60

Query: 83  FKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFV 142
           FKW S QKRF+HTADTY ++ILKLG+ G +E+ME  C  MV+E+ P   E LI+L+ SFV
Sbjct: 61  FKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFCSEMVREKCPGGEETLIALISSFV 120

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
            H R++ A+RVLV M S G+K S+  FN +LGA+V E+R F + + VYKE+VKAGIVPNV
Sbjct: 121 KHRRLSEAIRVLVIMTSNGYKFSIIEFNGLLGALVRERRDFREILLVYKEIVKAGIVPNV 180

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           DTLNYL+E LFE N I+ ALDQ+RRM KKGC PNS+TF+I+I GLIA + V+ SV +LGE
Sbjct: 181 DTLNYLIEALFELNWIDLALDQYRRMSKKGCSPNSKTFDILISGLIARNLVEKSVVVLGE 240

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M +L  + +LSFYT +IP+ C                         +  +L+  LC+  R
Sbjct: 241 MIELECEADLSFYTSVIPLFC-------------------------SVHQLVETLCQMER 275

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
           + +A ++   M   G          +++G+C  GK DE++  L   C   TS  NA    
Sbjct: 276 IQEAAEVFCYMSSNGCALKSSSLDMLMKGICVTGKVDEAIRLLVLACYSGTSCTNA---- 331

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
             +     L    L K +D  +                        +L +M+V   + D 
Sbjct: 332 --SYKAIMLGLSKLGKDSDILV------------------------VLSKMLVEGCILDV 365

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             Y   V   C L   ED  R F  + ++ LV DS + + L+  L +  ++   +     
Sbjct: 366 EAYCILVQSMCALSRTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGK 425

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
           ++ +G  L+SS +N+LI GL       +A RL  L    G     ST+
Sbjct: 426 LASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTH 473



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 192/526 (36%), Positives = 273/526 (51%), Gaps = 61/526 (11%)

Query: 208 LLEVLFETNRIESALDQFR-RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
           L+ VL  T+ + SA+  F+    +K     + T+  VI  L    +++D  +   EM   
Sbjct: 44  LIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFCSEMVRE 103

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
                      +I    +  +L EAIR+  +M +       + +  L+  L    R  D 
Sbjct: 104 KCPGGEETLIALISSFVKHRRLSEAIRVLVIMTSNGYKFSIIEFNGLLGALVRERR--DF 161

Query: 327 NDIL---EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
            +IL   ++++  G+ P  D    ++  L E+   D +++          SP++      
Sbjct: 162 REILLVYKEIVKAGIVPNVDTLNYLIEALFELNWIDLALDQYRRMSKKGCSPNS------ 215

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                                    +++I I  L     + K+  +LG M+      D +
Sbjct: 216 ------------------------KTFDILISGLIARNLVEKSVVVLGEMIELECEADLS 251

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y++ +   C                         S  +LVE LCQ+E+I EA EVFC M
Sbjct: 252 FYTSVIPLFC-------------------------SVHQLVETLCQMERIQEAAEVFCYM 286

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           S NGC+L SSS ++L+ G+CV  KVD+AIRL  LA  SGTS T ++Y  IMLGL KL + 
Sbjct: 287 SSNGCALKSSSLDMLMKGICVTGKVDEAIRLLVLACYSGTSCTNASYKAIMLGLSKLGKD 346

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            D+LVVL++MLVEGC LDVEAYCIL+QSM   ++ +D A FFN+MV  GLVPD ET+ +L
Sbjct: 347 SDILVVLSKMLVEGCILDVEAYCILVQSMCALSRTEDIARFFNLMVSEGLVPDSETVATL 406

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           L  L   SQLH + + I KL SD E+L+SSMYN+LI GL KEG  S+A  LLDLML KGW
Sbjct: 407 LSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDLMLEKGW 466

Query: 684 VPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGNT 729
           VPDA+THGLL+GS V E        +++S   D + +ILAEGL  T
Sbjct: 467 VPDASTHGLLIGSVVSEVPHKEAVEYENSCMQDKIGNILAEGLRET 512


>gi|218193899|gb|EEC76326.1| hypothetical protein OsI_13884 [Oryza sativa Indica Group]
          Length = 653

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 214/681 (31%), Positives = 339/681 (49%), Gaps = 78/681 (11%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           ++++++ I+SLR N  P+ L  +LD+ +D + AL+IF+W S Q+   HT DTY +MI KL
Sbjct: 49  SSEFDSAIRSLRINPQPERLAHILDSASDFNLALRIFRWASYQRMPIHTVDTYARMIAKL 108

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF-KLS 165
           G AG                                NH  + G ++ +V ++  G  K+ 
Sbjct: 109 GDAG--------------------------------NHDEIGGFLKEMVRLDVPGLEKVM 136

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
            D+   + G     K  F + + V +         +V + N +L  L +  R        
Sbjct: 137 NDLVQFLSG-----KNRFDEALLVIQHASSGNFKISVSSCNGVLCGLVKEGR-------- 183

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
                 G  P  R +  V+K                     G+  ++     +I +LC  
Sbjct: 184 ------GLRPFMRAYMEVVKA--------------------GVLPDVETLNWLIEVLCEA 217

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             LE A+  F  M     +P+  T++ LI  L     L +     +  ++   +    + 
Sbjct: 218 GHLELALVQFDKMSKKRCIPNSRTFKILITALAPMAELMNQ----QTHLIRCCSWDASLI 273

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
              V   C    F ++VNFLE+        +N LL   C  G+   +   L ++  R + 
Sbjct: 274 AHFVFRFCPYS-FHKAVNFLEENDVAEIEAYNVLLRSLCKTGRVQDSVNYLTELHSRGLV 332

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           +C SWNI I   C N  IR+A EL+ RM+VSS   D +TYS+ V   CKL  Y++AL +F
Sbjct: 333 NCQSWNIVIAQFCNNGNIRRASELICRMIVSSFTADESTYSSVVSCYCKLGLYKNALDMF 392

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           R++   +L L+S S+S+LVE LC +++I EA EVF    K GC+L+S S  +LI   C++
Sbjct: 393 RRLDVSNLSLNSESFSQLVESLCHMKQIQEAAEVFKYHCKRGCNLTSESLEMLIQESCMV 452

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             + +AI++RSLA  +GTS T +TY  I   L+ L++ KD+L++ A ML+EGC L+   Y
Sbjct: 453 GMIREAIKMRSLAVCTGTSCTFTTYNTIFRALLHLKKEKDVLLLFAHMLMEGCLLNEYTY 512

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             +++    +  + + A+ FN MVK G VPD+ET   L+  +A  S L+++S  +  +V+
Sbjct: 513 NCILRYFLTKETIFEAAILFNRMVKDGFVPDQETFELLVPEMALSSLLNMISESLLTVVN 572

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
              ++   + NI+I GL KEG  S+A   LD M+ KGWVPD+ TH +L+ SS G E    
Sbjct: 573 MDGMMSPRISNIIIYGLIKEGFKSEACKFLDQMIEKGWVPDSRTHSILLSSS-GREEPRE 631

Query: 706 RFAFDSSSFPDSVSDILAEGL 726
               + +   D+VS+IL EGL
Sbjct: 632 SDEVNHTVDDDNVSNILLEGL 652


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/682 (24%), Positives = 310/682 (45%), Gaps = 41/682 (6%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           +  L  + +P  LI  L    D  +AL++F W S Q  F  ++  Y +++ KLG AG+ E
Sbjct: 55  VHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFE 114

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNV 171
            M  + + M        R   +  V S+   + +   +  +V +    +++  D   +NV
Sbjct: 115 YMRRVLEEMKLSGCEFDRGIFLIFVESY-GKFELYDEVVGIVKVMEDEYRIKPDTRFYNV 173

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           +L  +V+  +        +  MV+  I  +V T N L++ L + +++  A+     M   
Sbjct: 174 LLNVLVDANK-LKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSY 232

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+  TF  +++G I    +D ++ I  +M + G          +I   C++ ++++A
Sbjct: 233 GLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA 292

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           +   +   +    PD+ TY  L+N LC+      A ++++ M++ GL P    +  ++ G
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISG 352

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
           LC++G+ +E+V  L+       SP NA+                             ++N
Sbjct: 353 LCKLGEIEEAVKILDQMVSRDCSP-NAV-----------------------------TYN 382

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I  LC+   + +A E+   +    ++PD  T+++ + G C   N++ A+ +F ++  +
Sbjct: 383 AIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               D  +Y+ L++ LC   K+ EA+ +   M  NGC+ +   +N LI G C  +++++A
Sbjct: 443 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEA 502

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             +       G S  + TY  ++ GL K +R +D   ++ QM++EG   D   Y  L+  
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTH 562

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             +   +K  A     M  +G  PD  T  +L+ GL    ++ + S  +  +     VL 
Sbjct: 563 FCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLT 622

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEIDSR 705
              YN +I  L+K   T +A  L   ML K   PDA T+ ++       G  +GE +D  
Sbjct: 623 PHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFT 682

Query: 706 RFAFDSSSFPDSVSDI-LAEGL 726
               +  + P+  S + LAEGL
Sbjct: 683 VEMIERGNIPEFSSFVMLAEGL 704



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 220/475 (46%), Gaps = 10/475 (2%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
            GN++    + + MV+   P     +  L+  F    R++ A+  +    S GF+     
Sbjct: 251 GGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFT 310

Query: 169 FNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +N ++  +   K G A     V   M+  G+ P++ T N L+  L +   IE A+    +
Sbjct: 311 YNTLVNGLC--KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQ 368

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  + C PN+ T+  +I  L   +RVD++  I   +   GI  ++  +  +I  LC  + 
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            + A+ LF+ M+     PDE TY  LI+ LC + +L++A ++L++M + G      ++  
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488

Query: 348 IVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C+  + +E+    ++         +  +N L++  C + +   A  ++++M    
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  D  ++N  +   C+  +I+KA +++  M  S   PD  TY+  + G CK    + A 
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           R+ R +  + +VL   +Y+ +++ L +  +  EA+ +F  M        + ++ I+  GL
Sbjct: 609 RLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGL 668

Query: 523 C-VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           C     + +A+         G     S++  +  GL  L    D LV L  M++E
Sbjct: 669 CNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLS-MDDTLVKLVDMIME 722


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 185/737 (25%), Positives = 313/737 (42%), Gaps = 56/737 (7%)

Query: 15  IKWV------NLTSCISSLSCA-NTIPLSSETDMIKSHQ----------TTDYEAKIQSL 57
           +KW        LT    +LS A N  P S       +H           +T   +    L
Sbjct: 7   LKWYPWTPPHTLTQPPPTLSSAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSPSPTTQL 66

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
             N +P  L   L   +D  S L +  W S Q  F  ++  Y +++ KLG  G+   M  
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSG-GFKLSVDVFNVVLGAI 176
           + Q M        R   + L+ S+      + A+ V+  M    G KL    +N +L  +
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
           V+  +       V   MV  GI P+V T N L++ L   ++I  A+     M   G  P+
Sbjct: 187 VDGNK-LKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPD 245

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
            +TF  +++G I    ++ ++ I  +M   G          ++   C+E ++EE +    
Sbjct: 246 EKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M      PD  T+  L+N LC    +  A +IL+ M+  G  P    +  ++ GLC++G
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRW 416
           + +E+V  L        SP+                                ++N  I  
Sbjct: 366 EVEEAVEILNQMILRDFSPNTV------------------------------TYNTLIST 395

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+  ++ +A EL   +    ++PD  T+++ + G C   N+  A+ +F ++  +    D
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +Y+ L++ LC   ++ EA+ +   M  +GCS +  ++N LI G C  +++++A  +  
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G S    TY  ++ GL K +R ++   ++ QML+EG   D   Y  L+       
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            +K  A     M   G  PD  T  +L+ GL+   ++ L S  +  +     VL    YN
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEIDSRRFAFD 710
            +I  L++E  TS+A  L   M+ KG  PDA T+ ++       G  +GE +D      D
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTD 695

Query: 711 SSSFPDSVSDI-LAEGL 726
               PD  S + LAEGL
Sbjct: 696 KGFLPDFSSFLMLAEGL 712



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/528 (23%), Positives = 238/528 (45%), Gaps = 7/528 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ +    +++  A+ ++  M S G       F  ++   +EE       + + ++MV A
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG-NMNGALRIREQMVAA 275

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G   +  T+N L+    +  RIE  L     M  +G  P+  TF  ++ GL     V  +
Sbjct: 276 GCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + IL  M   G   ++  Y  +I  LC+  ++EEA+ +   M   D  P+ +TY  LI+ 
Sbjct: 336 LEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST 395

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYV 372
           LC+  ++++A ++   +   G+ P    F  +++GLC       ++   E+     C   
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
              +N L++  C+ G+   A  +L++M     + +  ++N  I   C+N+ I +A E+  
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M +  +  +  TY+  + G CK    E+A ++  Q+  + L  D  +Y+ L+   C+  
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            I +A ++   M+ NGC   S ++  LI GL    +V+ A RL       G      TY 
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM-SEQNKLKDCALFFNVMVK 610
            ++  L + +R  + + +  +M+ +G   D   Y ++ + + S    + +   F   M  
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTD 695

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            G +PD  + L L  GL   S    +   +N+++  +   DS +  I+
Sbjct: 696 KGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVSMIM 743



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 218/487 (44%), Gaps = 26/487 (5%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           YCK        G +EE+      M  E +   R    SLV        V  A+ +L  M 
Sbjct: 291 YCK-------EGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 159 SGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
             GF   +  +N ++  +     VEE       V +  +M+     PN  T N L+  L 
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEA------VEILNQMILRDFSPNTVTYNTLISTLC 397

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           + N++E A +  R +  KG  P+  TF  +I+GL   +    ++ +  EM   G   +  
Sbjct: 398 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEF 457

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I  LC   +LEEA+ L K M +     + +TY  LI+  C+N R+++A +I ++M
Sbjct: 458 TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
            + G++     +  ++ GLC+  + +E+   ++        P    +N+LL   C AG  
Sbjct: 518 ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDI 577

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  I++ M       D  ++   I  L +   +  A  LL  + +  +V    TY+  
Sbjct: 578 KKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPV 637

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE-KITEAVEVFCCMSKNG 507
           +    +     +A+R+FR++  +    D+++Y  +  GLC     I EAV+    M+  G
Sbjct: 638 IKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKG 697

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                SSF +L  GLC +   D  I+L +       +++ S  + IM G +K+++ +D L
Sbjct: 698 FLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQA-NFSDSEVSMIM-GFLKIRKFQDAL 755

Query: 568 VVLAQML 574
             L ++L
Sbjct: 756 ATLGRIL 762


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 172/624 (27%), Positives = 296/624 (47%), Gaps = 41/624 (6%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           D+S+++ IF+W   QK + HT D Y  +I KLG A   + ++ L    +KE     RE+L
Sbjct: 81  DVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQ-IKEEGIAFRESL 139

Query: 135 ISLVFSFVNHYRVNG-AMRVLVNMNSGGF--KLSVDVFNVVLGAIVEEK-RGFADFVFVY 190
              +  +     + G A R+L++M  G +  + +   +NVVL  +V       A  VF  
Sbjct: 140 FICIMKYYGRANLPGQATRMLLDM-KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFY- 197

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            EM+  G++P V T   +++ L   N +++A    R M K GC PNS  ++ +I  L   
Sbjct: 198 -EMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKR 256

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            RV++++ +L EMF +G   ++  +  +I  LCR N++ E  +L   M      P+++TY
Sbjct: 257 DRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITY 316

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             L+N LC   ++D+A  +L  +     TP D  F  ++ G  + G+ DE+  FL DK  
Sbjct: 317 GVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDK-- 370

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
                   +++  C    F                   ++N  I  LC+   +  A +++
Sbjct: 371 --------MIKNGCRPDVF-------------------TFNTLIHGLCKKGLMGSAVDMV 403

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M  +   P+  TY+  + G CK    E+A  V  ++SA+   L+ + Y+ L+  LC+ 
Sbjct: 404 NDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKN 463

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+ +A+++   MS  GC     +FN LI+GLC + + + A+ L       G    T TY
Sbjct: 464 GKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTY 523

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++   ++    ++ L ++  ML  GC LD   Y  LI++  +    +     F+ MV+
Sbjct: 524 NTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVR 583

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
             LVP   +   L++GL    ++      +  ++      D   YN LINGL K G   +
Sbjct: 584 KDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIRE 643

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A  L + +  +G  PDA T+  L+
Sbjct: 644 AFNLFNKLQAEGIQPDAITYNTLI 667



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 159/333 (47%), Gaps = 5/333 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F +++   V+  R      F+Y +M+K G  P+V T N L+  L +   + SA+D    M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              GC PN  T+  ++ G    ++++++  +L EM   G +L +  Y  ++  LC+  K+
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A+ +   M      PD  T+  LI  LC+  R +DA  +  DM++ G+      +  +
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 349 VRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +      G   E++  + D     C      +N L++  C  G    A  + ++M  + +
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586

Query: 405 ADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
              + S N+ I  LC   ++  A ELL  M+   + PD  TY++ + G CK+ N  +A  
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
           +F ++ A+ +  D+I+Y+ L+   C+     +A
Sbjct: 647 LFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 5/267 (1%)

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           +V  EM   G   N+   N LL  L +  ++  ALD    M  KGC P+  TF  +I GL
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R +D++++  +M   G+      Y  +I    R   ++EA++L   M       DE
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE 555

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  LI   C+    + A  + ++M+   L P++     ++ GLC VGK   ++  L D
Sbjct: 556 ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRD 615

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 +P    +N+L+   C  G    A  +  K+    I  D  ++N  I W C    
Sbjct: 616 MIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGM 675

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFV 449
              AY LL R V ++ +P+  T+   V
Sbjct: 676 FDDAYLLLLRGVENAFIPNDVTWYILV 702


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 164/680 (24%), Positives = 307/680 (45%), Gaps = 44/680 (6%)

Query: 53  KIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           +++  R  L P  + RVL    D  +A+  F W    + F+H+  T    +  L   G+ 
Sbjct: 83  RLEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAG-DRGFKHSTFTRNCFLQTLLENGSS 141

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           + +  + + M+   Y         ++ S     +++ A  +L      GFK  V V+ ++
Sbjct: 142 DRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTIL 201

Query: 173 LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
             A  +  R   D + +++ +      P+    N ++      N  + AL+  + M+++ 
Sbjct: 202 TRAFCKTGR-LKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERK 256

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P+  T+ I+I GL   S+ D +  +L EM D G+  +   +  I+  LC+  K E A 
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            L  +M   +  P   TY  LI+ LC+   +D A D++++ +  G  P    +  +  GL
Sbjct: 317 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376

Query: 353 CEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADC 407
           C+ G+ DE+   +++  G   +P    +N L++  C A K   A  +LE +     + D 
Sbjct: 377 CKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDV 436

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++ I +  LC+   + KA +++  M+     P   TY+A + G C+    ++A  +F++
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVE----------------------------- 498
           + ++    D+++Y  LV G C+  +  EA +                             
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 556

Query: 499 ---VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
              VF  M+  GC  +  ++NI++ GLC   KVD+A       +S+G      +Y  I+ 
Sbjct: 557 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 616

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL K  + K+   VL QM+  G   D   Y  L+    ++ +  D       M+KAG+ P
Sbjct: 617 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS-SMYNILINGLWKEGLTSQASYL 674
           D  T  +L+ GL+  ++L      +++++ +  V+ + + YN +I+ L KEG   QA  L
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 736

Query: 675 LDLMLGKGWVPDATTHGLLV 694
           +D M G G   +  T+ + +
Sbjct: 737 MDHMTGHGVEANTVTYNIFI 756



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 248/535 (46%), Gaps = 41/535 (7%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N  L+ L E    +     F RM   G  P+S T+ +VIK L   +++D + ++L + 
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G + E+S YT +    C+  +L++A+ +F+ + +    PD + Y  +I+  C     
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDC 242

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NAL 379
           D A + L++M    + P    +  ++ GLC+  K D++   L +      +P     N++
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++  C AGKF  A  +L  MA+R     C ++N  I  LC+ + + +A +L+   V S  
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           VPD  TYS    G CK    ++A  + +++S +    + ++Y+ L++GLC+  K  +A E
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   +  +G      ++ I++ GLC   ++DKA+++       G + +  TYT +M GL 
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC----------------- 601
           +  R  +   +  +M+ + C  D  AY  L+    + ++ K+                  
Sbjct: 483 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYN 542

Query: 602 ALF---------------FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           AL                F  M   G VP+ +T   ++ GL    ++      +  + S 
Sbjct: 543 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 602

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             V D   YNI+I+GL+K     +A  +LD M+  G  PDA T+  L+     EE
Sbjct: 603 GCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/630 (23%), Positives = 288/630 (45%), Gaps = 19/630 (3%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           ND   AL+  K ++ +++      TY  +I  L  A   ++   +   MV          
Sbjct: 240 NDCDGALEFLKEMN-ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVT 298

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR--GFADFVFVYK 191
             S++       +   A  +L  M     + S   +N ++  + +++      D V    
Sbjct: 299 FNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV---D 355

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E V +G VP+V T + L + L +  RI+ A +  + M  KGC PN  T+  +I GL   S
Sbjct: 356 EFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKAS 415

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           + + +  +L  +   G   ++  YT I+  LC+E +L++A+++ + M      P  +TY 
Sbjct: 416 KTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYT 475

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            L+  LC   R+D+A+ I ++M+    T     +V +V G C+  +  E+   ++   G 
Sbjct: 476 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD---GI 532

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKA 426
             +P    +NAL++  C  G+      + E MA R  + +  ++NI +  LC++ ++ +A
Sbjct: 533 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 592

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           +  L  M  +  VPD  +Y+  + G  K    ++A +V  Q+    +  D+++Y+ L+  
Sbjct: 593 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 652

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C+ E+  +AV +   M K G    + ++N LI GL    ++  A  L      +G   +
Sbjct: 653 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 712

Query: 547 T-STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
             +TY  I+  L K    K  L+++  M   G   +   Y I I  + ++ +L + +   
Sbjct: 713 ACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL 772

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWK 664
           + M     + D  +  +++ GL    QL   S    ++V+   + + S  +N+LI+   K
Sbjct: 773 SEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTK 829

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                +A  LL LM+ +G  P   T+ +++
Sbjct: 830 TKRLDEALTLLGLMVQRGCSPSVITYNMVI 859



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 197/390 (50%), Gaps = 10/390 (2%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P +D  N L++   +  R++   + F  M  +GC PN +T+ IV+ GL  + +VD++  
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
            L  M   G   ++  Y  II  L + +K +EA ++   M    + PD +TY  L+   C
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP- 375
           +  R DDA  IL++MI  G+ P +  +  ++ GL +  +  ++   + +  + G V S  
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 714

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N +++  C  G    A  +++ M    + A+  ++NI I  LC+   + +A  LL  
Sbjct: 715 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 774

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYSKLVEGLCQVE 491
           M     + D  +Y+  ++G CK    + A ++ R+ V+ + L + S +++ L++   + +
Sbjct: 775 M---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTK 831

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++ EA+ +   M + GCS S  ++N++I  LC + KVDKA  L       G   ++ +YT
Sbjct: 832 RLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 891

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            ++ GL    R K+ L VL +M    C +D
Sbjct: 892 VLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/564 (23%), Positives = 242/564 (42%), Gaps = 74/564 (13%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMV 194
           +L+        V+ A  ++    S GF   V  ++++   +   KRG  D  F + KEM 
Sbjct: 336 TLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLC--KRGRIDEAFELVKEMS 393

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G  PN+ T N L++ L + ++ E A +    +   G  P+  T+ I++ GL    R+D
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ ++  M   G    +  YT ++  LCR  +++EA  +FK M + D   D L Y  L+
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513

Query: 315 NCLCENLR--------------------------------LDDANDILEDMIVIGLTPTD 342
           N  C++ R                                LD+  ++ EDM   G  P  
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             +  ++ GLC+ GK DE+  FLE        P    +N +++    A K   A+ +L++
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 399 MADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M    I  D  ++N  +   C+ E    A  +L  M+ + V PD  TY+  + G  +   
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 458 YEDALRVFRQVSAQSLVLDS-ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             DA  +  ++     V+ +  +Y+ +++ LC+   + +A+ +   M+ +G   ++ ++N
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753

Query: 517 I--------------------------------LIYGLCVMRKVDKAIRL-RSLAYSSGT 543
           I                                +I GLC   ++D+A +L R +    G 
Sbjct: 754 IFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             T+ T+  ++    K +R  + L +L  M+  GC+  V  Y ++I  + + +K+     
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 873

Query: 604 FFNVMVKAGLVPDRETMLSLLHGL 627
            F+ M   G+V    +   L++GL
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGL 897



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/460 (21%), Positives = 194/460 (42%), Gaps = 84/460 (18%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L   G V+E   + + MV +       A +SLV  +    R   A +V+  +
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
               +   +DV+N ++    +E R   +   V+++M   G VPN+ T N +++ L +  +
Sbjct: 533 RGTPY---IDVYNALMDGYCKEGR-LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 588

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A      MH  GC P+  ++ I+I GL   S+  ++  +L +M   GI  +   Y  
Sbjct: 589 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 648

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++   C+E + ++A+ + K M    + PD +TY  LI+ L +  RL DA +++ +M+  G
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708

Query: 338 L---------------------------------------TPTDDVFVDIVRGLCEVGKF 358
                                                   T T ++F+D    LC+ G+ 
Sbjct: 709 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID---RLCKEGRL 765

Query: 359 DES------VNFLEDKCGYVT-----------------------------SPH--NALLE 381
           DE+      ++ L D+  Y T                             + H  N L++
Sbjct: 766 DEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 825

Query: 382 CCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                 +   A  +L  M  R  +    ++N+ I  LC+ +++ KA+EL   M V  +V 
Sbjct: 826 AFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 885

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
              +Y+  + G C     ++AL+V  ++++    +D + +
Sbjct: 886 SSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKW 925



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)

Query: 191 KEMVKA-GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +EMV   G+     T N L++   +T R++ AL     M ++GC P+  T+ +VI  L  
Sbjct: 805 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             +VD +  +  EM   GI      YT +I  LC + + +EA+++ + M + D   D+L 
Sbjct: 865 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLK 924

Query: 310 YEEL 313
           +E++
Sbjct: 925 WEDV 928


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/685 (24%), Positives = 303/685 (44%), Gaps = 50/685 (7%)

Query: 55  QSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
             L  + SP  L+ +L    D SSAL +F+W S Q  +      + +++ +L  AG+ + 
Sbjct: 51  HPLPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDS 110

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVV 172
           M  L + M   + P      +  + ++   + ++  +  L  +    F +  D   +NV 
Sbjct: 111 MLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVA 170

Query: 173 LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
           L  +V+  +       ++ +MV   + P+V T N L+  L + +++  A+     M   G
Sbjct: 171 LSLLVKANK-LKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYG 229

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P+ +TF  +++G I  + V+ ++ I   M + G +L       ++  LC+E ++EEA+
Sbjct: 230 LRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEAL 289

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           R   +       PD++T+  L+N LC    +    ++++ M+  G       +  ++ GL
Sbjct: 290 RF--IYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGL 347

Query: 353 CEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD---- 408
           C++G+ DE+V                                IL  M  R   DC+    
Sbjct: 348 CKLGEIDEAVE-------------------------------ILHHMVSR---DCEPNTV 373

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC+   +  A EL   +    V+PD  T+++ + G C   N E A+ +F ++
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    D  +YS L+E LC   ++ EA+ +   M  +GC+ +   +N LI GLC   +V
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A  +       G S ++ TY  ++ GL K +R ++   ++ QM++EG   D   Y  +
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           ++   +Q  +K  A     M   G  PD  T  +L+ GL    ++ + S  +  +     
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEI 702
           VL    YN +I  L K   T +A  L   M+ KG  PD  T+ ++       G  + E +
Sbjct: 614 VLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAV 673

Query: 703 DSRRFAFDSSSFPDSVS-DILAEGL 726
           D      +    P+  S   LAEGL
Sbjct: 674 DFTVEMLEKGILPEFPSFGFLAEGL 698



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 230/505 (45%), Gaps = 17/505 (3%)

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
           +   +L+  F+    V GA+R+   M   G +L+    NV++  + +E R      F+Y+
Sbjct: 235 KTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE 294

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E    G  P+  T N L+  L  T  I+  L+    M +KG   +  T+  +I GL    
Sbjct: 295 E---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLG 351

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            +D++V IL  M     +     Y  +I  LC+EN +E A  L +++ +  ++PD  T+ 
Sbjct: 352 EIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFN 411

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---- 367
            LI  LC     + A ++ E+M   G  P +  +  ++  LC   +  E++  L++    
Sbjct: 412 SLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS 471

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKA 426
            C      +N L++  C   +   A+ I ++M    ++    ++N  I  LC+++ + +A
Sbjct: 472 GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEA 531

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +L+ +M++  + PD  TY+  +   C+  + + A  + + ++      D ++Y  L+ G
Sbjct: 532 AQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGG 591

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+  ++  A ++   +   G  L+  ++N +I  LC  ++  +A+RL       G    
Sbjct: 592 LCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651

Query: 547 TSTYTKIMLGLV----KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
             TY  +  GL      +Q A D  V   +ML +G   +  ++  L + +   +      
Sbjct: 652 VITYKIVFRGLCNGGGPIQEAVDFTV---EMLEKGILPEFPSFGFLAEGLCSLSMEDTLI 708

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGL 627
              N++++ G     ET  S++ G 
Sbjct: 709 QLINMVMEKGRFSQSET--SIIRGF 731



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 201/445 (45%), Gaps = 44/445 (9%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+        ++ A+ +L +M S   + +   +N ++G + +E    A    + + +  
Sbjct: 342 SLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAA-TELARVLTS 400

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G++P+V T N L++ L  T+  E A++ F  M +KGC P+  T+ I+I+ L +  R+ +
Sbjct: 401 KGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKE 460

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L EM   G    +  Y  +I  LC+ N++ +A  +F  M  L +    +TY  LIN
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLIN 520

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGY 371
            LC++ R+++A  +++ MI+ GL P    +  +++  C+ G    + + ++    + C  
Sbjct: 521 GLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEP 580

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
               +  L+   C AG+  +A  +L  +  +  +    ++N  I+ LC+ +  ++A  L 
Sbjct: 581 DIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLF 640

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ- 489
             M+     PD  TY                  VFR                   GLC  
Sbjct: 641 REMMEKGDPPDVITYKI----------------VFR-------------------GLCNG 665

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
              I EAV+    M + G      SF  L  GLC +   D  I+L ++    G    + +
Sbjct: 666 GGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGR--FSQS 723

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQML 574
            T I+ G +K+Q+  D L  L  +L
Sbjct: 724 ETSIIRGFLKIQKFNDALANLGAIL 748


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 283/646 (43%), Gaps = 42/646 (6%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P  + RVL   +DL  A+K F W + Q  ++H+  T C  +L                
Sbjct: 97  LVPSVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFT-CNCLLS--------------- 140

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
                              +FV   +   A  +  N   G        ++ ++    +  
Sbjct: 141 -------------------AFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCK-A 180

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R F     +  EM K GIVP+    N +++ L +  R++SAL  +R M ++ C P+  T+
Sbjct: 181 RDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITY 239

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I++  L  ++R+ D+  IL +M + G    +  Y  +I   C+   ++EA+ LF  M  
Sbjct: 240 TILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE 299

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
               PD  TY  LI+  C+  R  D   +L++M+  G  P    +  ++  L + GK+ +
Sbjct: 300 NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYID 359

Query: 361 SVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIR 415
           + N     L   C       N +++  C  G+  LA  + + M DR  + D  ++NI I 
Sbjct: 360 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 419

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C    I  A +LL RM  +   PD  TY++ V G CK    ++A  V+  +      L
Sbjct: 420 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 479

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++ S L++GLC+  ++ +A ++   M +NG +    ++ ILI+G C   ++DK++   
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 539

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
           S     G   T  TY+ ++  L K  R +D  ++L  ML  G   D   Y  +I  + + 
Sbjct: 540 SEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKS 599

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
           +   +    + +M + G  P   T   L+  L   S+L      +  + SD  + D+  Y
Sbjct: 600 DSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           N + +G WK     +A  L   M  +G  P    + LL+   V EE
Sbjct: 660 NSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEE 705



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 142/315 (45%), Gaps = 7/315 (2%)

Query: 57  LRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           LR +  P H     +I +      L  A ++F+ ++ +        TY  MI     A  
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY-TYNIMISGACRANR 426

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           +++   L + M +   P       S+V       +V+ A  V   + +GG+ L V   + 
Sbjct: 427 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 486

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           ++  + + +R   D   + +EM + G  P+V     L+    + ++++ +L  F  M  K
Sbjct: 487 LIDGLCKSRR-LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           GC P   T+ IVI  L  ++RV D   +L  M + G+  +   YT +I  LC+ +  +EA
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L+K+M+     P  +TY  L++ LC+  RLD+A  +LE M   G  P    +  +  G
Sbjct: 606 YELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDG 665

Query: 352 LCEVGKFDESVNFLE 366
             +  + D++    +
Sbjct: 666 FWKSAEHDKAFRLFQ 680


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 188/726 (25%), Positives = 323/726 (44%), Gaps = 79/726 (10%)

Query: 24  ISSLSCANTIPLSSETDMIKSHQTTDYEAK-IQSLRHNLSPDHLIRVLDNTNDLSSALKI 82
           I S     T PL    D    +    Y+ K +Q   + ++P  L ++L+   D+ +++ +
Sbjct: 21  IQSFPLCTTTPLGKNDDTEWENLLKPYDLKHLQRSLNPITPSQLCKLLELPLDVPTSMDL 80

Query: 83  FKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFV 142
           F+   +Q+ + H+   Y  +I KLG  G  + ++ L + M K+     +E+L  L+  + 
Sbjct: 81  FEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQM-KDEGCVFKESLFILIMRYY 139

Query: 143 NHYRVNG-AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPN 201
               + G A R+L++M                             V+ ++        P 
Sbjct: 140 GKAGLPGQATRLLLDMWG---------------------------VYCFE--------PT 164

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
             + N +LE+L   N  + A + F  M  +G  P   TF +V+K     + VD + S+L 
Sbjct: 165 FKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLR 224

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +M   G       Y  +I  L   N++ EA++L + M  +   PD  T+ ++I+ LC+  
Sbjct: 225 DMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAG 284

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           R+ +A  + + M++   T    +   ++ GLC +GK DE+   L       T  +N L+ 
Sbjct: 285 RIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLIN 344

Query: 382 CCCNAGKFFLAKCILEKMADRKIA----DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
               +G+F  AK +L K  +  IA    D  ++NI I  LC+   +  A E L  MV   
Sbjct: 345 GYVVSGRFEEAKDLLYK--NMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P+  TY+  + G CK  ++E+A +V   +SA+ L L+++ Y+ L+  LC+  KI +A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           +++  MS  GC     +FN LIYGLC   K+++A+ L       G    T TY  ++   
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522

Query: 558 VKLQRAKDLLVVLAQMLVEGCALD-------VEAYC------------------------ 586
           ++L+  +    ++ +M   GC LD       ++A C                        
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSI 582

Query: 587 ----ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
               ILI S     K+ D   F   M++ GL PD  T  SL++GL    +     +  N 
Sbjct: 583 NSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNG 642

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           L +     D+  YN LI+    EGL + A  LL   +  G++P+  T  +L+   V    
Sbjct: 643 LQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNS 702

Query: 703 DSRRFA 708
           DS +F 
Sbjct: 703 DSEQFT 708



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 218/509 (42%), Gaps = 43/509 (8%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L   N ++ A+K+ + + +    +    T+  +I  L  AG + E   L   M+  
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMG-CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLR 299

Query: 126 RYPNVREALIS--LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN--VVLGAIVEEKR 181
            +    +ALI   L+       +V+ A  +L  + +    L   + N  VV G   E K 
Sbjct: 300 DF--TADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKD 357

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
                  +YK MV AG  P+  T N +++ L +   + SAL+    M KKG  PN  T+ 
Sbjct: 358 ------LLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYT 411

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           I+I G       +++  ++  M   G+ L    Y C+I  LC++ K+++A++++  M + 
Sbjct: 412 ILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSK 471

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              PD  T+  LI  LC+N ++++A  +  DM++ G+      +  ++     +    ++
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
                DK                  G+     C L+ +         ++N  I+ LC+  
Sbjct: 532 -----DKL----------------VGEMRFRGCPLDNI---------TYNGLIKALCKTG 561

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
              K   L+ +M    + P   + +  +   C+     DAL+  R +  + L  D ++Y+
Sbjct: 562 ATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYN 621

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GLC++ +  EA+ +F  +   G    + ++N LI   C     + A +L     S+
Sbjct: 622 SLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSN 681

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           G      T++ ++   VK     +   +L
Sbjct: 682 GFIPNEITWSILINYFVKNNSDSEQFTIL 710


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 193/728 (26%), Positives = 329/728 (45%), Gaps = 59/728 (8%)

Query: 4   KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSP 63
           +L  + +SN+ I++ N T         NT  L S T+  +  +  D      SL   ++P
Sbjct: 44  QLQVVMLSNQDIRFYNDTVF------NNTNGLDSGTEWERLLKPFDLPELRTSLTR-ITP 96

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
             L ++L+   D+ +++++F+W   QK + H  D Y  +I KLG AG  +  + L   M 
Sbjct: 97  YQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMK 156

Query: 124 KERYPNVREALISLVFSFVNHYRVNG-AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           +E     RE+L  L+        + G A R+L++M                       RG
Sbjct: 157 QEGIV-FRESLFILIMKHYGRAGLPGQATRLLLDM-----------------------RG 192

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
                 VY         P   + N +L+VL   N  +   + F  M  KG  P   TF +
Sbjct: 193 ------VYS------CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 240

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           V+K L   + VD + ++L +M   G       Y  +I  L +  ++ E ++L + M  + 
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG 300

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +PD  T+ + I+ LC+ LR+ +A  +++ M++ G TP    +  ++ GLC +GK DE+ 
Sbjct: 301 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR 360

Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCIL-EKMADRKIA-DCDSWNIPIRW 416
             L      V +P+    N L+    + G+   AK ++ E M       D  ++N  I  
Sbjct: 361 MLLNK----VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+   +  A EL+  M +    P+  TY+  +   CK    E+A  V  ++S + L L+
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           ++ Y+ L+  LC+ EK+ +A+ +F  MS  GC     +FN LI+GLC + K ++A+ L  
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G    T TY  ++   ++    ++ L ++  ML  GC LD   Y  LI+++    
Sbjct: 537 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            ++     F  M+  GL P+  +   L++GL     +      +  ++      D   YN
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 656

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI--DSRRF---AFDS 711
            LINGL K G   +A  L D +  +G  PDA T+  L+     E +  D+        DS
Sbjct: 657 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 716

Query: 712 SSFPDSVS 719
              P+ V+
Sbjct: 717 GFIPNEVT 724



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 36/294 (12%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I +    G +EE   +   M  +           L+ +     +V  A+ +  +M
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 503

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL-------- 209
           +S G K  +  FN ++  + +  + F + + +Y++M+  G++ N  T N L+        
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNK-FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562

Query: 210 ---------------------------EVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
                                      + L     IE  L  F  M  KG  PN+ +  I
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GL     +  ++  L +M   G+  ++  Y  +I  LC+  + +EA+ LF  ++   
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           + PD +TY  LI+  C+    DDA+ +L   +  G  P +  +  +V    + G
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 181/671 (26%), Positives = 320/671 (47%), Gaps = 34/671 (5%)

Query: 59  HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGL 118
           + ++P  L ++L+   D+ ++++IFKW   QK + H+   Y  +I KLG A   + ++ L
Sbjct: 67  NKITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRL 126

Query: 119 CQNMVKERYPNVREALISLVFSFVNHYRVNG-AMRVLVNMNSGGF--KLSVDVFNVVLGA 175
              M KE     RE+L  L+  +     + G A R+L++M  G +  + S   +NVVL  
Sbjct: 127 LLQM-KEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM-KGVYCCEPSFRSYNVVLDV 184

Query: 176 IVEEK-RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
           +V       A  VF   +M+  G+ PN  T   +++ L   N +++A    R M K GC 
Sbjct: 185 LVVGNCPSVASNVFY--DMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCV 242

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PNS  ++ +I  L    RVD+++ +L EMF +G   +++ +  +I   CR N++ E  +L
Sbjct: 243 PNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKL 302

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIVRGL 352
              M      P+++TY  L++ LC+  R+D+A  +L  +      P  +V  F  +V G 
Sbjct: 303 VDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV------PGPNVVHFNTLVNGF 356

Query: 353 CEVGKFDESVNFLEDKC---GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
              G+ +E+  F+ DK    GYV      + L+   C  G F  A   LE + D     C
Sbjct: 357 VRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSA---LELVNDMDAKGC 413

Query: 408 ----DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
               +++ I I   C+  ++ +A  +L  M+      +   Y+A +   CK     +AL 
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALD 473

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++S++    D  +++ L+ GLC+V+++ +A+ ++  M   G   +S +FN LI+   
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFL 533

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              ++ +A++L +     G      TY  ++  L K    +  L +  +M+ +G    + 
Sbjct: 534 RRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSII 593

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
              ILI       K+ +   F   M+  G  PD  T  SL++GL    ++    +   KL
Sbjct: 594 TCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKL 653

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSS 697
            ++    DS  YN LI  L +EG    A +LL   +  G+VP+  T  +LV       +S
Sbjct: 654 QAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNS 713

Query: 698 VGEEIDSRRFA 708
            G+ I   +F+
Sbjct: 714 EGQTITYAQFS 724


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 173/669 (25%), Positives = 314/669 (46%), Gaps = 17/669 (2%)

Query: 54  IQSLR---HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           + SLR   H ++P  L ++L+   D+S+++++F W   QK ++H+ D Y  +I KLG  G
Sbjct: 60  LDSLRNSFHKITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNG 119

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVF 169
             + ++ L   M  E         IS++  +          R+++ M N    + +   +
Sbjct: 120 EFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY 179

Query: 170 NVVLGAIVEEK-RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           NVVL  +V       A  VF   +M+   I P + T   +++ L   N ++SAL   R M
Sbjct: 180 NVVLEILVSGNCHKVAANVFY--DMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDM 237

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K GC PNS  ++ +I  L   +RV++++ +L EMF +G   +   +  +I  LC+ +++
Sbjct: 238 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 297

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA ++   M      PD++TY  L+N LC+  R+D A D+   +      PT  +F  +
Sbjct: 298 NEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTL 353

Query: 349 VRGLCEVGKFDESVNFLEDK-CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           + G    G+ D++   L D    Y   P    +N+L+      G   LA  +L  M ++ 
Sbjct: 354 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKG 413

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              +  S+ I +   C+  +I +AY LL  M    + P+   ++  +   CK     +A+
Sbjct: 414 CKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 473

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +FR++  +    D  +++ L+ GLC+V++I  A+ +   M   G   ++ ++N LI   
Sbjct: 474 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 533

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               ++ +A +L +     G+     TY  ++ GL +         +  +ML +G     
Sbjct: 534 LRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSS 593

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            +  ILI  +     +++   F   MV  G  PD  T  SL++GL    ++    +   K
Sbjct: 594 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 653

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           L ++    D+  YN L++ L K G    A  LLD  +  G+VP+  T  +L+ S V +E 
Sbjct: 654 LQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQET 713

Query: 703 DSRRFAFDS 711
             RR  +++
Sbjct: 714 LDRRTFYNA 722


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 183/674 (27%), Positives = 310/674 (45%), Gaps = 54/674 (8%)

Query: 31  NTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQK 90
           NT  L S T+  +  +  D      SL   ++P  L ++L+   D+ +++++F+W   QK
Sbjct: 47  NTNGLDSGTEWERLLKPFDLPELRTSLTR-ITPYQLCKLLELPLDVPTSMELFQWAGTQK 105

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG- 149
            + H  D Y  +I KLG AG  + ++ L   M +E     RE+L  L+   + HY   G 
Sbjct: 106 GYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIV-FRESLFILI---MKHYGRAGL 161

Query: 150 ---AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
              A R+L++M                       RG      VY         P   + N
Sbjct: 162 PGQATRLLLDM-----------------------RG------VYS------CEPTFRSYN 186

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            +L+VL   N  +   + F  M  KG  P   TF +V+K L   + VD + ++L +M   
Sbjct: 187 VVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH 246

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G       Y  +I  L +  ++ E ++L + M  +  +PD  T+ + I+ LC+ LR+ +A
Sbjct: 247 GCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEA 306

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLEC 382
             +++ M++ G TP    +  ++ GLC +GK DE+   L      V +P+    N L+  
Sbjct: 307 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK----VPNPNVVLFNTLING 362

Query: 383 CCNAGKFFLAKCIL-EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             + G+   AK ++ E M       D  ++N  I  LC+   +  A EL+  M +    P
Sbjct: 363 YVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 422

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  TY+  +   CK    E+A  V  ++S + L L+++ Y+ L+  LC+ EK+ +A+ +F
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             MS  GC     +FN LI+GLC + K ++A+ L       G    T TY  ++   ++ 
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 542

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
              ++ L ++  ML  GC LD   Y  LI+++     ++     F  M+  GL P+  + 
Sbjct: 543 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 602

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             L++GL     +      +  ++      D   YN LINGL K G   +A  L D +  
Sbjct: 603 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 662

Query: 681 KGWVPDATTHGLLV 694
           +G  PDA T+  L+
Sbjct: 663 EGICPDAITYNTLI 676



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 11/306 (3%)

Query: 402 RKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           R +  C+    S+N+ +  L      +    +   M+   + P   T+   +   C +  
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A  + + ++    V ++I Y  L+  L +V ++ E +++   M   GC    ++FN 
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            I+GLC M ++ +A +L       G +  + TY  +M GL ++ +  +     A+ML+  
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE-----ARMLLNK 347

Query: 578 CA-LDVEAYCILIQSMSEQNKLKDC-ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
               +V  +  LI     + +L +  A+    M+  G  PD  T  +L+ GL     L  
Sbjct: 348 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 407

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
               +N++       +   Y ILI+   KEG   +A  +LD M GKG   +A  +  L+ 
Sbjct: 408 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 467

Query: 696 SSVGEE 701
           +   +E
Sbjct: 468 ALCKDE 473



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 122/294 (41%), Gaps = 36/294 (12%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I +    G +EE   +   M  +           L+ +     +V  A+ +  +M
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL-------- 209
           +S G K  +  FN ++  + +  + F + + +Y++M+  G++ N  T N L+        
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNK-FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544

Query: 210 ---------EVLFE------------------TNRIESALDQFRRMHKKGCCPNSRTFEI 242
                    ++LF                      IE  L  F  M  KG  PN+ +  I
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 604

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GL     +  ++  L +M   G+  ++  Y  +I  LC+  + +EA+ LF  ++   
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           + PD +TY  LI+  C+    DDA+ +L   +  G  P +  +  +V    + G
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 256/539 (47%), Gaps = 8/539 (1%)

Query: 142 VNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPN 201
           +NH  V+ A+ V   M   G +  V  F  ++  +  E +     V +Y EMV++G  P+
Sbjct: 141 LNH--VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK-IKVAVELYNEMVRSGHEPD 197

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           V + N L+  L  +     A+  F++M + GC PN  T+  +I  L  +  V+D++  L 
Sbjct: 198 VISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLS 257

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           EM   GI  +   Y  I+  LC   +L EA RLFK M      PD +TY  +I+ L ++ 
Sbjct: 258 EMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR 317

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHN 377
            ++DA D L +M+  G+ P    +  I+ GLC +G+ +E++       +  C      +N
Sbjct: 318 LVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYN 377

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            +++  C       A   L +M DR I  +  +++  +   C   ++ +A +L   MV  
Sbjct: 378 TIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
           +V+P+  T+S  V G C+     +A  VF  ++ + +  +  +Y+ L+ G C   K+ EA
Sbjct: 438 NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEA 497

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            +VF  M   GC+    S+NILI G C  R++DKA  L +       +  T TY  IM G
Sbjct: 498 RKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L  + R  D   +  +M   G    +  Y IL+  + +   L +    F  M +  L PD
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPD 617

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
                 L+ G+  G +L +     +KL +D        YN++I GL KEGL+ +A  L 
Sbjct: 618 IILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 232/471 (49%), Gaps = 18/471 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+    N    N A+ V   M   G K +V  +N ++ ++ ++ R   D +    EMV 
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD-RLVNDAMDFLSEMVG 261

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            GI P+  T N ++  L    ++  A   F+RM + GC P+  T+ I+I  L  +  V+D
Sbjct: 262 RGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVND 321

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +   L EM D GI  ++  YT I+  LC   +L EAIRLFK M      PD + Y  +I+
Sbjct: 322 AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC++  ++DA + L +M+  G+ P    +  I+ G C +G+ DE+    ++  G    P
Sbjct: 382 SLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441

Query: 376 H----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL---CENEEIRKAY 427
           +    + L++  C  G    A+ + E M ++ +  +  ++N  +      C+  E RK +
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           E+   MV     PD  +Y+  + G C     + A  +  Q+S + L  ++++Y+ +++GL
Sbjct: 502 EI---MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C V ++ +A E+F  M  +G   +  +++IL+ GLC    +D+A++L             
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDI 618

Query: 548 STYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
             YT ++ G+    KL+ AK L    +++  +G       Y ++I+ + ++
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGL---FSKLSADGIQPPGRTYNVMIKGLLKE 666



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 233/481 (48%), Gaps = 11/481 (2%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           +S + LI  L N+ + + A+ +FK +  Q   +    TY  +I  L     V +      
Sbjct: 199 ISYNTLINGLCNSGNTNMAVHVFKKME-QNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLS 257

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            MV    P       S+V       ++N A R+   M   G K  V  +N+++ ++ +++
Sbjct: 258 EMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR 317

Query: 181 --RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
                ADF+    EMV  GI P+V T   +L  L    ++  A+  F++M +KGC P+  
Sbjct: 318 LVNDAADFL---SEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
            +  +I  L  +  V+D++  L EM D GI      Y+ I+   C   +L+EA +LFK M
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
              ++MP+ LT+  L++ LC+   + +A  + E M   G+ P    +  ++ G C   K 
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
           +E+    E   G   +P    +N L+   CN+ +   AK +L +M+ +K+  +  ++N  
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           ++ LC    +  A EL  +M  S ++P   TYS  + G CK  + ++AL++F+ +  + L
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D I Y+ L+EG+    K+  A  +F  +S +G      ++N++I GL      D+A  
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674

Query: 534 L 534
           L
Sbjct: 675 L 675



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/625 (22%), Positives = 266/625 (42%), Gaps = 72/625 (11%)

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
           N   V+ A+     M     + S+  F   LG+I + K+ ++  V++  +M   G+   V
Sbjct: 70  NTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQ-YSTVVYLCNQMDLFGVTHTV 128

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            +LN L+  L   N ++ A+  + +M K G  P+  TF  +I G+    ++  +V +  E
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G + ++  Y  +I  LC       A+ +FK M      P+ +TY  +I+ LC++  
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
           ++DA D L +M+  G+ P    +  IV GLC +G+ +E+    +                
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKR--------------- 293

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
                        +E+   +   D  ++NI I  L ++  +  A + L  MV   + PD 
Sbjct: 294 -------------MEQNGCK--PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDV 338

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+  + G C L    +A+R+F+++  +    D ++Y+ +++ LC+   + +A+E    
Sbjct: 339 VTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-----------RSLAYS----------- 540
           M   G   ++ +++ +++G C + ++D+A +L            +L +S           
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458

Query: 541 -------------SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
                         G      TY  +M G     +  +   V   M+ +GCA D+ +Y I
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI       ++         M    L P+  T  +++ GL    +L        K+ S  
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRR 706
            +     Y+IL+NGL K G   +A  L   M  K   PD   + +L+ G  +G +++  +
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAK 638

Query: 707 FAF-----DSSSFPDSVSDILAEGL 726
             F     D    P    +++ +GL
Sbjct: 639 GLFSKLSADGIQPPGRTYNVMIKGL 663



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 150/327 (45%), Gaps = 6/327 (1%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           ++N A+R+   M   G K  V  +N ++ ++ ++ R   D +    EMV  GI PN  T 
Sbjct: 353 QLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD-RLVNDAMEFLSEMVDRGIPPNAVTY 411

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + +L       +++ A   F+ M  +   PN+ TF I++ GL     V ++  +   M +
Sbjct: 412 STILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE 471

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G++  +  Y  ++   C   K+ EA ++F++M      PD  +Y  LIN  C + R+D 
Sbjct: 472 KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDK 531

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A  +L  M V  LTP    +  I++GLC VG+  ++    +  C     P    ++ LL 
Sbjct: 532 AKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G    A  + + M ++K+  D   + I I  +    ++  A  L  ++    + P
Sbjct: 592 GLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQP 651

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQ 467
              TY+  + G  K    ++A  +FR+
Sbjct: 652 PGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 4/166 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  + N  R++ A  +L  M+      +   +N ++  +    R   D   ++K+M  +
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR-LLDAQELFKKMCSS 577

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G++P + T + LL  L +   ++ AL  F+ M +K   P+   + I+I+G+    +++ +
Sbjct: 578 GMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVA 637

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF---KMMR 299
             +  ++   GIQ     Y  +I  L +E   +EA  LF   KMM+
Sbjct: 638 KGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMK 683


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 188/710 (26%), Positives = 330/710 (46%), Gaps = 62/710 (8%)

Query: 4   KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDM-IKSHQTTDYEAKIQS-----L 57
           +  SL+ S   I  +   SC +S    N    S    M ++S   T++E+ ++      L
Sbjct: 11  RTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWESLLEPFDLTKL 70

Query: 58  RHN---LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           R +   ++P  L ++L+   D+ + L+IF+ V  QK + HT D Y   I KLG  G  + 
Sbjct: 71  RKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKL 130

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG----AMRVLVNMNSGGFKLSVDVFN 170
           ++ L   M KE     RE++  ++   + HY   G    A+R+L++M +           
Sbjct: 131 IDKLLMQM-KEEGIVFRESIFMII---MKHYGKAGQPGQAIRLLLDMRA----------- 175

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
                           V++ +        P   + + +LE+L   N  + A + F  M  
Sbjct: 176 ----------------VYLCE--------PTFKSYDLVLEILVTGNCPQVATNVFYDMLS 211

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           KG  P   TF IV+K L   + VD + S+L +M   G       Y  +I  L ++N++ E
Sbjct: 212 KGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A++L + M  +  MPD  T+ ++I+ LC+  ++ DA  +++ M++ G  P +  +  ++ 
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN----AGKFFLAKCIL-EKMADRKI- 404
           GLC +GK +E+   L      +  P+NA+L    N    +G+   A+  L E M +    
Sbjct: 332 GLCRIGKLNEARKILIK----IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++NI +  LC+   +  A +L+  M      P+  TY+  V G CK    E+A  V
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             ++SA+ L ++S+ Y+ L+  LC+ EK+  A+ +   M   GC     ++N LIYGLC 
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
           + ++D+A RL       G      TY  ++  L++    +  L ++  ML  GC LD   
Sbjct: 508 VDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKIT 567

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  LI++  +   ++     +  M+  GL  D  +   +++GL    ++      +   +
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +   V D   YN ++NGL K G   +A  L D +  +G  PDA T+   +
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 115/528 (21%), Positives = 225/528 (42%), Gaps = 54/528 (10%)

Query: 58  RHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           +H   P+      LI  L   N +S ALK+ + + +         T+  +I  L     +
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD-VQTFNDVIHGLCKVNKI 304

Query: 113 EEMEGLCQNMV-KERYPNVREALISLVFSFVNHY-----RVNGAMRVLVNMN-SGGFKLS 165
            +   L   M+ +  YP+      ++ + F+ H      ++N A ++L+ +       L+
Sbjct: 305 HDATKLVDRMLLRGFYPD------NMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILN 358

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
             +   V+   ++E + F +     + M+  G  P++ T N L+  L +   +  A D  
Sbjct: 359 TLINGYVMSGQLKEAQSFLN-----ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             M ++GC PN  T+ I++ GL     ++++  +L EM   G+ +    Y C+I  LCR+
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            K+  A+ L   M      PD  TY  LI  LC+  R+D+A  +  +M++ G    +  +
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
             ++  L   G F +++  + D                          C L+K+      
Sbjct: 534 NTLIHALLRRGAFQKALTLVND---------------------MLFRGCTLDKI------ 566

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
              ++N  I+  C+   I K  EL  +M++  +  D  + +  + G CK+   ++A    
Sbjct: 567 ---TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFL 623

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           R    +  V D ++Y+ ++ GLC+V +I EA+ +F  +   G    + ++N  I   C  
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKE 683

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
             V+ A         +G   +  T+  ++  L+K    ++   VL ++
Sbjct: 684 GMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 135/577 (23%), Positives = 237/577 (41%), Gaps = 47/577 (8%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           S D ++ +L   N    A  +F +  + K    T  T+  ++  L +   V+    L ++
Sbjct: 185 SYDLVLEILVTGNCPQVATNVF-YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRD 243

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M K           +L+ +     +V+ A+++L  M   G    V  FN V+  + +  +
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
              D   +   M+  G  P+  T  +LL  L    ++  A    R++  K  CPN+    
Sbjct: 304 -IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILN 358

Query: 242 IVIKGLIANSRVDDSVSILGE-MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            +I G + + ++ ++ S L E M + G Q ++  Y  ++  LC+E  L  A  L   M  
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
               P+ +TY  L+N LC+   L++A  +L +M   GLT    ++  ++  LC   K   
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHV 478

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIR 415
           ++N L + C     P    +N+L+   C   +   A  +   M  D  +A+  ++N  I 
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            L      +KA  L+  M+      D  TY+  +   CK+ N E  L ++ Q+    L  
Sbjct: 539 ALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D+IS + ++ GLC+V K+  A E        G      ++N ++ GLC            
Sbjct: 599 DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC------------ 646

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                                  K+ R K+ L +  ++ VEG   D   Y   I    ++
Sbjct: 647 -----------------------KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKE 683

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
             + D  LFF   ++ G VP   T   L++ L   S 
Sbjct: 684 GMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 322/674 (47%), Gaps = 31/674 (4%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           +SP  L ++L+   D+ +++++F+    QK + HT D    +I KLG  G+ + +E L +
Sbjct: 64  ISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLK 123

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNG----AMRVLVNMNSGGFKL--SVDVFNVVLG 174
            M K+     +E+L  L+   + HY   G    A R+L++M  G +    +   +NVVL 
Sbjct: 124 QM-KDEGLLFKESLFILI---MKHYGKAGLPGQATRLLLDM-WGVYSCDPTFKSYNVVLD 178

Query: 175 AIVEE--KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
            +V+    R   +   V+ +M+  G+ P V T   +++ L   + ++SA    R M K G
Sbjct: 179 ILVDGDCPRVAPN---VFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG 235

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C PNS  ++ +I  L  N+RV +++ +L +MF +  + ++  +  +I  LCR  ++ EA 
Sbjct: 236 CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAA 295

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           +L   M       D LTY  L++ LC   ++D+A  +L  +      P   ++  ++ G 
Sbjct: 296 KLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGY 351

Query: 353 CEVGKFDESVNFLEDK---CGYVTSPH--NALLECCCNAGKFFLAKCILEKM-ADRKIAD 406
              G+F+E+ + L +     GY    +  N +++     G    A  +L +M A R   +
Sbjct: 352 VASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPN 411

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++ I I   C+   + +A E++  M    +  +   Y+  +   CK  N E+AL++F 
Sbjct: 412 VITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFG 471

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++S +    D  +++ L+ GLC+  K+ EA+ ++  M   G   ++ ++N L++   +  
Sbjct: 472 EMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRD 531

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            + +A +L       G      TY  ++  L K    +  L +  +ML +G    + +  
Sbjct: 532 SIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCN 591

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           ILI  +    K+ D   F   M+  GL PD  T  SL++GL     +   S+  NKL S+
Sbjct: 592 ILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRR 706
               D+  YN LI+    EG+ + A  LL   +  G++P+  T  +L+   V +     R
Sbjct: 652 GIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWGAR 711

Query: 707 FAFDSS-----SFP 715
           F+ D +     SFP
Sbjct: 712 FSKDFTVECGVSFP 725


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 169/734 (23%), Positives = 326/734 (44%), Gaps = 52/734 (7%)

Query: 7   SLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHL 66
           + T + K   W      ++S    +   LS  T   +   TT   A    L  N +P  L
Sbjct: 2   AFTSTLKYHTWFPFHHHLASHKPTSNSTLSFATTNHEPLTTTTNSA--TRLSPNFTPTQL 59

Query: 67  IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER 126
           +  L    D S+ + +F W S Q  F+ ++  + +++ KLG AG  + M+ + + M    
Sbjct: 60  LHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISL 119

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMN-SGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                ++L+  + S+ +    N  ++ +  M    G   +   +N +L  +V+  +    
Sbjct: 120 SVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNK-LKL 178

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
               +  MV  GI P+V T N L++ L   ++I  A+     M   G  P+ +TF  +++
Sbjct: 179 VEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQ 238

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LM 304
           G I    +D ++ +  +M + G  +       ++   C+E ++EEA+R  + M   +   
Sbjct: 239 GFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF 298

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD+ T+  L+N L +   +  A ++++ M+  G  P    +  ++ GLC++G+ DE+V  
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           L           N ++E  C+                    +  ++N  I  LC+  ++ 
Sbjct: 359 L-----------NQMIERDCS-------------------PNTVTYNTIISTLCKENQVE 388

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A +L   +    ++PD  TY++ + G C   N+  A+ +++++  +    D  +Y+ L+
Sbjct: 389 EATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLI 448

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           + LC   K+ EA+ +   M  +GC+ +  ++N LI G C  +++ +A  +       G S
Sbjct: 449 DSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVS 508

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             + TY  ++ GL K +R ++   ++ QM++EG   D   Y  L+    +   +K  A  
Sbjct: 509 RNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADI 568

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              M   G  PD  T  +L+ GL    ++   +  +  +      L    YN +I  L++
Sbjct: 569 VQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFR 628

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEID------SRRFAFDSS 712
              + +A  L   M+ K   PDA T+ ++       G  +GE +D       R +  + S
Sbjct: 629 RKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFS 688

Query: 713 SFPDSVSDILAEGL 726
           SF      +LAEGL
Sbjct: 689 SF-----YMLAEGL 697


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 160/632 (25%), Positives = 288/632 (45%), Gaps = 11/632 (1%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVRE 132
           +D  +AL+ F W S Q+ F H   TY ++   L  A  ++E   + +N       PNV  
Sbjct: 2   SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFT 61

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
             + ++        ++ A  +L  M   G      ++N V+ A+  + R  A  +  ++ 
Sbjct: 62  YAV-VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALC-KARNTAKALDYFRS 119

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M       NV T   +++ L + NR+  A   F +M KKG  PN  T+ ++I G     +
Sbjct: 120 ME---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V  +  +L EM + G+   +  Y+ +I   CR+ K++ A +LF+ M     MP+ +TY  
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++ LC N  +D+A ++L++M   GL P    +  ++ GLC+ GK D ++   ED     
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    ++ L+   C AG+   A  + EKM +     D  ++   +  LC+ + +++A 
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ++L  M   +  P+  TYS+ + G CK     DA  VF+++  + +  + ++Y+ L+ G 
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C    +  A+ +   M+  GC     ++N LI GLC   +  +A RL     +   +   
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY+ ++ G  KL+R      +   ML +    DV  +  L++       + D       
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV +   PD  T  SL+ G     ++      + ++       +   Y  LI+   + G 
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
            + A  LL+ M+G G  P+  T+  L+G   G
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCG 628



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 260/563 (46%), Gaps = 15/563 (2%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +++  F    +V+ A ++   M   G   ++  +N +L  +   + G  D  
Sbjct: 194 PNV-VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC--RNGLMDEA 250

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + +  EM + G+ P+  + + L+  L +T +I+ AL  F       C P+   +  +I G
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 310

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+D++  +  +M +   + ++  +T ++  LC+ ++L+EA ++ + M   +  P+
Sbjct: 311 LCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  LI+ LC+  ++ DA ++ + MIV G+ P    +  ++ G C     D ++  +E
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           +       P    +N L++  C  G+   A  +   M  +    D  +++  I   C+ E
Sbjct: 431 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 490

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            I  A  L   M+  +V+PD  T+S  V G C     +DA R+  ++ A     D  +Y+
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            LV+G C+V ++ EA  V   M+K GC  +  ++  LI   C   K   A RL      +
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610

Query: 542 GTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
           G      TY  ++ G      L+ A+ +L  L +   E C  D+ AY +++  +    ++
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLER--DENCKADMFAYRVMMDGLCRTGRM 668

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL-VSDSEVLDSSMYNI 657
                    + ++G  P  +  ++L+ GL  G +L      + ++ +S     ++  Y  
Sbjct: 669 SAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEA 728

Query: 658 LINGLWKEGLTSQASYLLDLMLG 680
           +I  L +EG   +A+ L D +LG
Sbjct: 729 VIQELAREGRHEEANALADELLG 751



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 226/504 (44%), Gaps = 14/504 (2%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  T+  + + L+   R+D++  IL   +  GI   +  Y  +I  LC+   L++A  L 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           + MR    +PD   Y  +I+ LC+      A D    M       T  + +D   GLC+ 
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMID---GLCKA 139

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSW 410
            +  E+  +        T P    +N L+   C   K   A  +L++M +  +A +  ++
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           +  I   C   ++  AY+L  +MV +  +P+  TY+  + G C+    ++A  +  ++  
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + L  D  SY  L+ GLC+  KI  A++VF   S   C     +++ LI GLC   ++D+
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A +L      +       T+T +M GL K  R ++   VL  M    C  +V  Y  LI 
Sbjct: 320 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 379

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
            + +  +++D    F  M+  G+ P+  T  SL+HG    + +      + ++ +   + 
Sbjct: 380 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 439

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-EEIDSRRFAF 709
           D   YN LI+GL K G   +A+ L   M  K   PD  T+  L+G     E ID  R  F
Sbjct: 440 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 499

Query: 710 D----SSSFPDSVS-DILAEGLGN 728
           D     +  PD V+   L EG  N
Sbjct: 500 DDMLKQAVLPDVVTFSTLVEGYCN 523


>gi|357115068|ref|XP_003559314.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 495

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 176/298 (59%), Gaps = 2/298 (0%)

Query: 50  YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           +E+ I+SL++NL P+ L RVLD+T+DL+ AL+IFKW S Q+ F HTADTY  MI KLG  
Sbjct: 44  FESAIRSLKNNLQPERLTRVLDSTSDLNLALRIFKWASSQRIFVHTADTYACMISKLGAV 103

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           GN +EM+ L + M+K   P + + L  LV   ++  R + A+ V+ N  SG  KLSV   
Sbjct: 104 GNCDEMDILLKEMIKLNVPVLDKILNDLVQYLISKNRYDEALLVVQNACSGKLKLSVSSC 163

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           NVVL  + +E RG   FV  Y E+VKAG++P+ DTLN+L+E L    R++ AL QF RM 
Sbjct: 164 NVVLCGLAKEGRGLRPFVRAYMEIVKAGVLPDADTLNWLIEALCGAGRLDLALIQFDRMS 223

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM--LCRENK 287
           KK C PNS TF+I+I  L ++ R D+SV +  +M  L    ++SFY  ++P+  L +  K
Sbjct: 224 KKRCTPNSHTFKILITALCSHGRADESVELFEKMLQLRCIPDISFYFQVLPVFSLFQLKK 283

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++A+ +   M     + D   Y  L+ C      + +A  +   M+  G  P  + F
Sbjct: 284 EKDALLILAQMLMEGCVLDSYAYNVLLRCFLTKETVLEAAILFNRMVNDGFVPDQETF 341



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 138/242 (57%), Gaps = 2/242 (0%)

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           +R + ++    ++ D+ + + L+E LC   ++  A+  F  MSK  C+ +S +F ILI  
Sbjct: 181 VRAYMEIVKAGVLPDADTLNWLIEALCGAGRLDLALIQFDRMSKKRCTPNSHTFKILITA 240

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM--LGLVKLQRAKDLLVVLAQMLVEGCA 579
           LC   + D+++ L             S Y +++    L +L++ KD L++LAQML+EGC 
Sbjct: 241 LCSHGRADESVELFEKMLQLRCIPDISFYFQVLPVFSLFQLKKEKDALLILAQMLMEGCV 300

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           LD  AY +L++    +  + + A+ FN MV  G VPD+ET   L+  +A  S L  VS  
Sbjct: 301 LDSYAYNVLLRCFLTKETVLEAAILFNRMVNDGFVPDQETFELLVPDMAVFSLLSTVSES 360

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           + K+V+   V+   + NI+I GL KEG  ++A   LD ML KGWVPD+ TH +LVG+  G
Sbjct: 361 LLKVVNIDGVMSPRISNIIIYGLIKEGFKNEACKFLDQMLDKGWVPDSKTHSVLVGTVDG 420

Query: 700 EE 701
           +E
Sbjct: 421 KE 422



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 147/349 (42%), Gaps = 50/349 (14%)

Query: 291 AIRLFKMMRALDLMPDEL-TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           A+R+FK   +  +      TY  +I+ L      D+ + +L++MI + +   D +  D+V
Sbjct: 73  ALRIFKWASSQRIFVHTADTYACMISKLGAVGNCDEMDILLKEMIKLNVPVLDKILNDLV 132

Query: 350 RGLCEVGKFDESVNFLEDKC---------------------GYVTSPH------------ 376
           + L    ++DE++  +++ C                     G    P             
Sbjct: 133 QYLISKNRYDEALLVVQNACSGKLKLSVSSCNVVLCGLAKEGRGLRPFVRAYMEIVKAGV 192

Query: 377 -------NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYE 428
                  N L+E  C AG+  LA    ++M+ ++   +  ++ I I  LC +    ++ E
Sbjct: 193 LPDADTLNWLIEALCGAGRLDLALIQFDRMSKKRCTPNSHTFKILITALCSHGRADESVE 252

Query: 429 LLGRMVVSSVVPDCATYSAF--VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           L  +M+    +PD + Y     V    +L   +DAL +  Q+  +  VLDS +Y+ L+  
Sbjct: 253 LFEKMLQLRCIPDISFYFQVLPVFSLFQLKKEKDALLILAQMLMEGCVLDSYAYNVLLRC 312

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV---MRKVDKAIRLRSLAYSSGT 543
               E + EA  +F  M  +G      +F +L+  + V   +  V +++ L+ +      
Sbjct: 313 FLTKETVLEAAILFNRMVNDGFVPDQETFELLVPDMAVFSLLSTVSESL-LKVVNIDGVM 371

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           S   S    I+ GL+K     +    L QML +G   D + + +L+ ++
Sbjct: 372 SPRISNI--IIYGLIKEGFKNEACKFLDQMLDKGWVPDSKTHSVLVGTV 418



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 25/279 (8%)

Query: 180 KRGFADFVFVYKEMV-KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           +R F      Y  M+ K G V N D ++ LL+ + + N     LD              +
Sbjct: 83  QRIFVHTADTYACMISKLGAVGNCDEMDILLKEMIKLN--VPVLD--------------K 126

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK-LEEAIRLFKM 297
               +++ LI+ +R D+++ ++       ++L +S    ++  L +E + L   +R +  
Sbjct: 127 ILNDLVQYLISKNRYDEALLVVQNACSGKLKLSVSSCNVVLCGLAKEGRGLRPFVRAYME 186

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           +    ++PD  T   LI  LC   RLD A    + M     TP    F  ++  LC  G+
Sbjct: 187 IVKAGVLPDADTLNWLIEALCGAGRLDLALIQFDRMSKKRCTPNSHTFKILITALCSHGR 246

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK------CILEKM-ADRKIADCDSW 410
            DESV   E        P  +           F  K       IL +M  +  + D  ++
Sbjct: 247 ADESVELFEKMLQLRCIPDISFYFQVLPVFSLFQLKKEKDALLILAQMLMEGCVLDSYAY 306

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           N+ +R     E + +A  L  RMV    VPD  T+   V
Sbjct: 307 NVLLRCFLTKETVLEAAILFNRMVNDGFVPDQETFELLV 345


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 170/666 (25%), Positives = 312/666 (46%), Gaps = 18/666 (2%)

Query: 54  IQSLR---HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           + SLR   H ++P  L ++L+   ++S+++++F W   Q  ++H+ D Y  +I KLG  G
Sbjct: 66  LDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANG 125

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVF 169
             + ++ L   M  E         IS++  +          R+++ M N    + +   +
Sbjct: 126 EFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY 185

Query: 170 NVVLGAIVEEK-RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           NVVL  +V       A  VF   +M+   I P + T   +++     N I+SAL   R M
Sbjct: 186 NVVLEILVSGNCHKVAANVFY--DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K GC PNS  ++ +I  L   +RV++++ +L EMF +G   +   +  +I  LC+ +++
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA ++   M      PD++TY  L+N LC+  R+D A D+   +      P   +F  +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359

Query: 349 VRGLCEVGKFDESVNFLEDK-CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           + G    G+ D++   L D    Y   P    +N+L+      G   LA  +L  M ++ 
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              +  S+ I +   C+  +I +AY +L  M    + P+   ++  +   CK     +A+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +FR++  +    D  +++ L+ GLC+V++I  A+ +   M   G   ++ ++N LI   
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               ++ +A +L +     G+     TY  ++ GL +         +  +ML +G A   
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            +  ILI  +     +++   F   MV  G  PD  T  SL++GL    ++    +   K
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE- 701
           L ++    D+  +N L++ L K G    A  LLD  +  G+VP+  T  +L+ S + +E 
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719

Query: 702 IDSRRF 707
           +D RRF
Sbjct: 720 LDRRRF 725


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 169/683 (24%), Positives = 302/683 (44%), Gaps = 59/683 (8%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           D L+  L    D  +AL++      ++ F  +   Y ++I KLG AG  + MEGL + M 
Sbjct: 57  DRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMR 116

Query: 124 KERYPNVREALISLVFSFVNHY----RVNGAMRVLVN-MNSGGFKLSVDVFNVVLGAIVE 178
           +E +    EA   +V SFV  Y    R + A+ ++ N +N+ G +    V+N +L  + E
Sbjct: 117 REGH----EAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAE 172

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
             R       VY EM   GI P+V TLN L++ L   +++ +A+     M      P+  
Sbjct: 173 GSR-MKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDET 231

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TF  +++G I    ++ ++ +  +M + G          +I   C+  ++E+A+   +  
Sbjct: 232 TFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
            A    PD++TY   ++CLC+N  +  A  +++ M+  G  P  DVF             
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDP--DVFT------------ 337

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
                            +N ++ C    G+   AK I+ +M DR  + D  ++N  I  L
Sbjct: 338 -----------------YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C    + +A +L   + V  + PD  T++  +   CK+ +    +R+F ++ +     D 
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L++ LC + K+  A+++   M  NGC  S+ ++N +I  LC   ++++A  +   
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             + G S +  T+  ++ GL K +R  D   ++ QM+ EG       Y  ++    +Q  
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           LK  A     M   G   D  T  +L++GL    +  +    +  +           YN 
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEID------SR 705
           +I  L++      A  L   M   G  PDA T+ ++       G  + E  D      ++
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNK 680

Query: 706 RFAFDSSSFPDSVSDILAEGLGN 728
            F  + SSF      +LAEGL N
Sbjct: 681 GFMPEFSSF-----RMLAEGLLN 698


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 170/660 (25%), Positives = 294/660 (44%), Gaps = 63/660 (9%)

Query: 55  QSLRHNLSPD-----HLIRVLDNTNDLSSALKIFK---WVSIQKRFQHTADTYCKMILKL 106
           + L    SPD      +++      DL  AL  F+   W S       TA TYC +I   
Sbjct: 49  EMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCS------PTAFTYCILI--- 99

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
                     GLCQ                         R++ A ++L  M         
Sbjct: 100 ---------HGLCQCQ-----------------------RIDEAYQLLDEMIQKDCHPDA 127

Query: 167 DVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
            V+N ++  +   K G  D    V K M++   VP+V T   L+    +TN ++ A    
Sbjct: 128 AVYNCLIAGLC--KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
            +M + G  P++  +  ++ GL   +++++   +L EM + G + +   Y  ++  LC  
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            K EEA ++ + M      PD +TY  L++  C+  ++D+A  +LEDM+     PT   +
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMAD 401
             ++ G     +  ++   +ED      SP    +N LL+  C AGK   A  +LE M +
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           +  A D  +++I +  LC+  ++  A  LL  M+     P+  T++  + G CK    ++
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
             +V   +   S   D ++YS L++G C+  ++ +A  +       G S   +S++ ++ 
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLE 479

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC   KV++A  +  L    G   T+S Y  I+ GL  ++R  + L +L  M   GC  
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEP 539

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           ++  Y ILI  + +  +++D     +VM++ G VPD  T  SL+ G    +++       
Sbjct: 540 NLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCF 599

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
             +       D   YNILI+G  + G   +A  ++ LML KG  PDA T+  L+ S   E
Sbjct: 600 KTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 170/606 (28%), Positives = 274/606 (45%), Gaps = 57/606 (9%)

Query: 170 NVVLGAIVE--EKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           N   GA++    + G +  V  +  EM+     P+V T N +L+   +   ++ AL  FR
Sbjct: 24  NSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFR 83

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
              K  C P + T+ I+I GL    R+D++  +L EM       + + Y C+I  LC+  
Sbjct: 84  --GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           K++ A  + KMM     +PD +TY  LI   C+   LD+A  ++E M   GLTP    + 
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++ GLC+  + +E    LE+       P    +N ++ C C +GK+  A  ILEKM ++
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 403 KIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           K   D  ++N  +   C+  ++ +A  LL  MV     P   TY+  + G  +     DA
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
            RV   +    +  D ++Y+ L++GLC+  K+ EA E+   M +  C+    +++IL+ G
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           LC + KVD A  L  +    G      T+  ++ G  K  +  +   VL  M    C  D
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL-------------- 627
           V  Y  LI    + N+++D    F ++   G+ PD+ +  S+L GL              
Sbjct: 442 VVTYSTLIDGYCKANRMQDA---FAIL---GISPDKASYSSMLEGLCSTGKVEEAQEVMD 495

Query: 628 --------ADGSQLHLVSSGINKLVSDSEVL-------------DSSMYNILINGLWKEG 666
                      S   L+  G+  +    E L             +   Y+ILINGL K  
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF----DSSSFPDSVS-D 720
               A  +LD+ML KG VPD  T+  L+ G     ++D+    F    DS   PD ++ +
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615

Query: 721 ILAEGL 726
           IL  G 
Sbjct: 616 ILISGF 621



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 7/186 (3%)

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
           +S  +  + STY  ++ G  +   +K +L +  +ML    + DV  +  ++++  +   L
Sbjct: 16  FSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDL 75

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                 F    K    P   T   L+HGL    ++      +++++      D+++YN L
Sbjct: 76  DRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCL 133

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAF----DSSS 713
           I GL K G    A  +L +ML +  VPD  T+  L+VG      +D  R       +S  
Sbjct: 134 IAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL 193

Query: 714 FPDSVS 719
            PD+V+
Sbjct: 194 TPDTVA 199


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 275/606 (45%), Gaps = 41/606 (6%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PN      +L+ SF N + +   +++L N    GFK   + +N+ L A+VE+ +      
Sbjct: 88  PNAT-TFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNK-LKLVE 143

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            ++ +MV  GIV +V T N L++ L + +++  A+     M   G  P+  TF  +++G 
Sbjct: 144 MLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGF 203

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           I    ++ ++ +  +M   G  L       ++   C+E ++EEA+R    +      PD+
Sbjct: 204 IEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQ 263

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +T+  L+N  C    ++DA DI++ MI  G  P    +  ++ G+C++G+F++++  L+ 
Sbjct: 264 VTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQ- 322

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                      L EC  N                       ++N  I  LC+  EI  A 
Sbjct: 323 --------QMILRECSPNTV---------------------TYNTLISALCKENEIEAAT 353

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L   +V   ++PD  T++  + G C   N + A+ +F ++  +    D  +YS L++ L
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C   ++ EA+ +   M  +GC+ ++  +N LI GLC  R+++ A  +       G S ++
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ GL K +R ++   ++ QM++EG   D   Y  L+        ++        
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M   G  PD  T  +L+ GL    ++ + S  +  +     VL    YN +I  L+    
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEIDSRRFAFDSSSFPDSVS-D 720
           T +   L   M+ K   PDA TH ++       G  + E ID      +    P+  S  
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFG 653

Query: 721 ILAEGL 726
            LAEGL
Sbjct: 654 FLAEGL 659



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 231/514 (44%), Gaps = 32/514 (6%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F     + K++  +G +PN  T   L++     + IE+ L      ++ G  P++  + I
Sbjct: 71  FDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELGFKPDTNFYNI 128

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +  L+ ++++     +  +M + GI L++S +  +I  LC+ ++L  AI + + M    
Sbjct: 129 ALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHG 188

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L PDE+T+  L+    E   L+ A  + + M+  G   T+     +V G C+ G+ +E++
Sbjct: 189 LKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEAL 248

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
            F                              +LE   +    D  ++N  +   C    
Sbjct: 249 RF------------------------------VLEVSEEGFSPDQVTFNSLVNGFCRIGN 278

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A +++  M+     PD  TY++ + G CKL  +E A+ + +Q+  +    ++++Y+ 
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+  LC+  +I  A ++   +   G      +FN LI GLC+ +  D A+ +     + G
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY+ ++  L   +R K+ L++L +M   GCA +   Y  LI  + +  +++D  
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F+ M   G+     T  +L+ GL    ++   S  +++++ +    D   YN L+   
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            + G   +A  ++  M   G  PD  T+G L+G 
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGG 552



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 248/555 (44%), Gaps = 38/555 (6%)

Query: 43  KSHQTTDYEAKIQSL-RHNLSPDH-----LIRVLDNTNDLSSALKIFKW----------V 86
           K+HQ       ++ +  H L PD      L++      DL+ ALK+ K           V
Sbjct: 170 KAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV 229

Query: 87  SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYR 146
           S++       + +CK        G VEE       + +E +   +    SLV  F     
Sbjct: 230 SVKV----LVNGFCK-------EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGN 278

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTL 205
           VN A+ ++  M   GF   V  +N ++  +   K G F   + + ++M+     PN  T 
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMC--KLGEFEKAIEILQQMILRECSPNTVTY 336

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L+  L + N IE+A D  R +  KG  P+  TF  +I+GL  +   D ++ +  EM +
Sbjct: 337 NTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKN 396

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G + +   Y+ +I  LC E +L+EA+ L K M +     + + Y  LI+ LC++ R++D
Sbjct: 397 KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIED 456

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A +I + M ++G++ +   +  ++ GLC+  + +E+   ++        P    +N+LL 
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G    A  I++ MA      D  ++   I  LC    +  A +LL  + +  +V 
Sbjct: 517 YFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVL 576

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE-KITEAVEV 499
               Y+  +         ++ +R+FR++  +S   D++++  +  GLC     I EA++ 
Sbjct: 577 TPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDF 636

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M + G      SF  L  GLC +   D  I L ++      +  +   T ++ G +K
Sbjct: 637 TVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEK--AQMSERETSMIRGFLK 694

Query: 560 LQRAKDLLVVLAQML 574
           +++  D L  L  +L
Sbjct: 695 IRKFNDALANLGGIL 709


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 172/647 (26%), Positives = 297/647 (45%), Gaps = 16/647 (2%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P H+  V+   ND  +ALK+F  V  +  F+HT +TY  MI KLGL G  E ME +  
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64

Query: 121 NMVKERYPNVREAL-ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
            M K     + E + I ++  +    +V  A+ V   M+    + SV  +N ++  +VE 
Sbjct: 65  EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY 124

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
              F+    VY  M   GI P+V T    ++    T R  +AL     M  +GC  N+ +
Sbjct: 125 GY-FSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  VI G    +   ++  +  EM   GI  ++  +  +I +LC++  ++E+ +LF  + 
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + P+  T+   I  LC    +D+A  +LE ++  GLTP    +  ++ G C+  K  
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL-EKMADRKIADCDSWNIPI 414
           E+  +L         P    +N ++   C AG    A  IL + M    I D  +++  I
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 415 RWLCENEEIRKA----YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
             LC + ++ +A    YE + +    S++     Y+  V G  K      AL++ + +  
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSII----LYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                D  +Y+ +V GLC++  +++A  +       GC     +FN LI G C  R +DK
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           AI +     S G +    TY  ++ GL K ++  +++     ML +GC  ++  Y ILI+
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV- 649
           S  +  K+ +    F  M   GL PD  T+ +L+ GL    +L         +  + +  
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             ++++NI+IN   ++   S A  L   M G    PD  T+ +++ S
Sbjct: 600 YSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 32/373 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMV 194
           SL+    N   +N AM V       GFK S+ ++N ++  +   K+G     + + K+M+
Sbjct: 361 SLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL--SKQGLVLQALQLMKDMM 418

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G  P++ T N ++  L +   +  A         KGC P+  TF  +I G      +D
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ IL  M   GI  ++  Y  ++  LC+  KL+  +  FK M      P+ +TY  LI
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
              C++ ++ +A ++ ++M   GLTP       ++ GLC  G+ D++         +VT 
Sbjct: 539 ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL------FVTI 592

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                        KF  +  I              +NI I   CE   +  A +L  +M 
Sbjct: 593 EKEY---------KFSYSTAI--------------FNIMINAFCEKLNVSMAEKLFHKMG 629

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            S   PD  TY   +   CK  N + A     +  ++ LV    +  K++  LC   +++
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 495 EAVEVFCCMSKNG 507
           EAV +   M +NG
Sbjct: 690 EAVVIINLMVQNG 702



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 141/311 (45%), Gaps = 23/311 (7%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L N  D++ A+ +F + +++K F+H+   Y  ++  L   G V +   L ++M++ 
Sbjct: 362 LINGLCNDGDMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420

Query: 126 R-YPNVREALISLVFSFVNHYRVNG---------AMRVLVNMNSGGFKLSVDVFNVVLGA 175
              P++        ++ V    VNG         A  +L +  + G    +  FN ++  
Sbjct: 421 GCSPDI------WTYNLV----VNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
             ++ R     + +   M+  GI P+V T N LL  L +  ++++ +D F+ M +KGC P
Sbjct: 471 YCKQ-RNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  T+ I+I+    + +V +++ +  EM   G+  ++     +I  LC   +L++A  LF
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589

Query: 296 -KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
             + +          +  +IN  CE L +  A  +   M      P +  +  ++   C+
Sbjct: 590 VTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649

Query: 355 VGKFDESVNFL 365
            G  D +  FL
Sbjct: 650 TGNIDLAHTFL 660



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 11/187 (5%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV---EEKRGFA 184
           PN+    I L+ SF    +V+ AM +   M + G    +     ++  +    E  + + 
Sbjct: 529 PNIITYNI-LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
            FV + KE        +    N ++    E   +  A   F +M    C P++ T+ ++I
Sbjct: 588 LFVTIEKEY---KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMI 644

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALD 302
                   +D + + L E    G  L  SF TC  ++  LC  ++L EA+ +  +M    
Sbjct: 645 DSYCKTGNIDLAHTFLLENISKG--LVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702

Query: 303 LMPDELT 309
           ++P+E+ 
Sbjct: 703 IVPEEVN 709


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 160/671 (23%), Positives = 300/671 (44%), Gaps = 41/671 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           L+  L +  D S+AL++F   S +  F      Y +++L+LG +G+ ++M  + ++M   
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFA 184
                    + L+ S+      +  + V+  M +  G K     +N +L  +V+      
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVD-GNNLK 171

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
                + +M   GI P+V T N L++ L   +++  A+     M   G  P+ +TF  ++
Sbjct: 172 LVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIM 231

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-L 303
           +G I    +D ++ I  +M + G          I+   C+E ++E+A+   + M   D  
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD+ T+  L+N LC+   +  A +I++ M+  G  P    +  ++ GLC++G+  E+V 
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
           FL+       SP+                                ++N  I  LC+  ++
Sbjct: 352 FLDQMITRDCSPNTV------------------------------TYNTLISTLCKENQV 381

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A EL   +    ++PD  T+++ + G C   N+  A+ +F ++ ++    D  +Y+ L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++ LC   K+ EA+ +   M  +GC+ S  ++N LI G C   K+ +A  +       G 
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGV 501

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           S  + TY  ++ GL K +R +D   ++ QM++EG   D   Y  L+        +K  A 
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAAD 561

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
               M   G  PD  T  +L+ GL    ++ + S  +  +      L    YN +I GL+
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLF 621

Query: 664 KEGLTSQASYLLDLMLGKG-WVPDATTHGLLV------GSSVGEEIDSRRFAFDSSSFPD 716
           ++  T++A  L   ML +    PDA ++ ++       G  + E +D      +    P+
Sbjct: 622 RKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

Query: 717 SVS-DILAEGL 726
             S  +LAEGL
Sbjct: 682 FSSLYMLAEGL 692


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 262/574 (45%), Gaps = 47/574 (8%)

Query: 163  KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
            KL+  V   VL  +   + G A   F      + G   +  T N LL+ L    R + AL
Sbjct: 808  KLTTTVVGKVLQGV---RNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDAL 864

Query: 223  DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              +R  +K  C PN  TF I+I GL     +  +  +L EM   G+   +  +  +I  L
Sbjct: 865  QVYR--NKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGL 922

Query: 283  CRENKLEEAIRLFK-MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C   KL+ A+ LFK M  +    PD  TY  +++ L ++ ++DDA  ++EDM+  G +P 
Sbjct: 923  CSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPN 982

Query: 342  DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
               +  ++ GLC+ GK DE+   L+       SP    +N +++  C  G+   A  +LE
Sbjct: 983  VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 1042

Query: 398  KMADRK------------------------------------IADCDSWNIPIRWLCENE 421
            +M D                                      + +  ++N  +   C+ +
Sbjct: 1043 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 1102

Query: 422  EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            E+ +A +LL  M+    VP+  +Y+  + G CK     + + +  Q+ + + V D ++++
Sbjct: 1103 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162

Query: 482  KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYS 540
             +++ +C+  ++  A E+F  + ++GC+ +  ++N L++GLC  R+ D+A   LR +   
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222

Query: 541  SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
             G S    TY  ++ GL K +R      +  QML +G A D   Y I+I S+ +   + +
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 1282

Query: 601  CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                  +M+K G  P   T  +L+ G      L      +  L+S     D   ++I I+
Sbjct: 1283 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 1342

Query: 661  GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             L K G   QA  LL+ ML  G VPD  T+  L+
Sbjct: 1343 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLL 1376



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 162/685 (23%), Positives = 291/685 (42%), Gaps = 58/685 (8%)

Query: 13  KIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDN 72
           ++ +WV   S IS L     +  +S+   ++          +   R  LSP+ + +VL  
Sbjct: 53  RVDRWVGSDSPISVLE--RIVQGASDEQALR--------VALDEYRGQLSPEIVGKVLQR 102

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMIL--KLGLAGNVEEMEGLCQNMVKERYPNV 130
             D  +AL  F+W   +  +QH  + +C   L   L  A    +   L ++ ++ ++   
Sbjct: 103 LIDPGAALVFFEWAETRDGYQH--EIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGD 160

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV---------------------- 168
                +L+  F+   ++  A  +   MN  G K    V                      
Sbjct: 161 TVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFR 220

Query: 169 ------------FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
                       +N ++  + +  R   D + + +EMV  G  PNV + N +L    + N
Sbjct: 221 EMSKTCPPDSVTYNTMINGLSKSDR-LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+E+AL    +M  +GC P+  ++  VI GL    +VD++  ++ +M   G Q  +  Y 
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++   CR   L+ A+ L + M      P+ +TY  +++  C    ++ A+ +L+ MI  
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLA 392
           G  P    +  I+ G C+ GK  E+ + LE        P  A    L++  C A     A
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA 459

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + +L        A D  +++I I  LC+ + + +A   L  MV +   PD  TY++ V G
Sbjct: 460 QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK     DA  +F ++ A  ++ D ++YS ++   C+   +  A ++   M +  C   
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             +++ LI GLC    VDKA  +       G +    TY  ++ GL K+ + +    +L 
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M  + C  D   Y  LI  +   ++L++       M   G +PDR T  +LL  L   +
Sbjct: 640 IMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTN 699

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYN 656
            L LV     +L+ + E  +   +N
Sbjct: 700 NLELVE----QLLKEMEATEEGQWN 720



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 149/618 (24%), Positives = 271/618 (43%), Gaps = 70/618 (11%)

Query: 51   EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTY-CKMILK---- 105
            E  ++     L+   + +VL    +  +AL  F W + Q+ + H  DTY C  +L+    
Sbjct: 799  ETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNH--DTYTCNCLLQALLR 856

Query: 106  ------------------------------LGLAGNVEEMEGLCQNMVKERYPNVREALI 135
                                          L  AG++     L + M +   P       
Sbjct: 857  LKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHN 916

Query: 136  SLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
             ++    +  +++ A+ +   M  SG     V  ++ ++ ++V+  +   D   + ++MV
Sbjct: 917  VVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGK-VDDACRLVEDMV 975

Query: 195  KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
              G  PNV T + LL  L +  +++ A    +RM + GC PN  T+  +I G     R+D
Sbjct: 976  SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 1035

Query: 255  DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++  +L EM D G Q  +  YT ++   C+  K E+AI L ++M     +P+  TY  L+
Sbjct: 1036 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 1095

Query: 315  NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
            +  C+   ++ A  +L  MI  G  P    +  ++ GLC+  K  E V  LE        
Sbjct: 1096 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE-------- 1147

Query: 375  PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                                  + +++  + D  ++N  I  +C+   +  AYEL   + 
Sbjct: 1148 ----------------------QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185

Query: 435  VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS-AQSLVLDSISYSKLVEGLCQVEKI 493
             S   P+  TY++ V G CK   ++ A  + R+++  Q    D I+Y+ +++GLC+ +++
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245

Query: 494  TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
              A ++F  M  +G +    +++I+I  LC  R +D+A  +  L   +G      TY  +
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 1305

Query: 554  MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
            + G  K       L +L  +L +G   DV  + I I  +S++ +L+        M++AGL
Sbjct: 1306 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 1365

Query: 614  VPDRETMLSLLHGLADGS 631
            VPD  T  +LL G  D S
Sbjct: 1366 VPDTVTYNTLLKGFCDAS 1383



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 249/519 (47%), Gaps = 9/519 (1%)

Query: 191  KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP-NSRTFEIVIKGLIA 249
            KEM + G+  NV   N +++ L    +++SAL+ F+ M + G CP +  T+  ++  L+ 
Sbjct: 901  KEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVK 960

Query: 250  NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            + +VDD+  ++ +M   G    +  Y+ ++  LC+  KL+EA  L + M      P+ +T
Sbjct: 961  SGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 1020

Query: 310  YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--- 366
            Y  +I+  C+  R+D+A  +LE+M+  G  P    +  ++   C+ GK ++++  +E   
Sbjct: 1021 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 1080

Query: 367  DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEI 423
            +K GYV +   +N+LL+  C   +   A  +L  M  +  + +  S+N  I  LC+  ++
Sbjct: 1081 EK-GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139

Query: 424  RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             +   LL +M+ ++ VPD  T++  +   CK    + A  +F  +       + ++Y+ L
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 1199

Query: 484  VEGLCQVEKITEAVEVFCCMS-KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
            V GLC+  +  +A  +   M+ K GCS    ++N +I GLC  ++VD+A +L     S G
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 1259

Query: 543  TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
             +    TY+ ++  L K +   +   VL  ML  G       Y  LI    +   L    
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 1319

Query: 603  LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
                +++  G  PD  T    +  L+   +L      +  ++    V D+  YN L+ G 
Sbjct: 1320 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGF 1379

Query: 663  WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
                LT  A  L ++M   G  PD  T+  LVG  V ++
Sbjct: 1380 CDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKK 1418



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 200/434 (46%), Gaps = 4/434 (0%)

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G Q E+    C++ +L + ++  +A  LF+         D +TY  LI+      ++  A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV-NFLE--DKCGYVTSPHNALLECC 383
            ++ ++M   GL     V   I+RGLC+ G+  ++V +F E    C   +  +N ++   
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGL 240

Query: 384 CNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
             + +   A  +LE+M D   A +  S+N  +   C+   +  A  LL +MV     PD 
Sbjct: 241 SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDV 300

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            +Y+  + G CKL   ++A RV  ++  +    + I+Y  LV+G C+V  +  AVE+   
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 360

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M++ G   ++ ++N +++  C    +++A ++  +   +G       Y+ I+ G  K  +
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
            ++   +L QM+  GC  DV     LI ++ +   +        + +     PD      
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+H L    +L    S ++ +V +    D   YN +++GL K    + A  L D M   G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540

Query: 683 WVPDATTHGLLVGS 696
            +PD  T+ +++ S
Sbjct: 541 VMPDVVTYSIVIHS 554


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 161/671 (23%), Positives = 300/671 (44%), Gaps = 41/671 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           L+  L +  D S+AL++F   S +  F      Y +++L+LG +G+ ++M+ + ++M   
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           R        + L+ S+      +  + V+  M +  G K     +N +L  +V+      
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLK 171

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
                + +M   GI P+V T N L++ L   +++  A+     M   G  P+ +TF  V+
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-L 303
           +G I    +D ++ I  +M + G          I+   C+E ++E+A+   + M   D  
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD+ T+  L+N LC+   +  A +I++ M+  G  P    +  ++ GLC++G+  E+V 
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
            L+       SP+                                ++N  I  LC+  ++
Sbjct: 352 VLDQMITRDCSPNTV------------------------------TYNTLISTLCKENQV 381

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A EL   +    ++PD  T+++ + G C   N+  A+ +F ++ ++    D  +Y+ L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++ LC   K+ EA+ +   M  +GC+ S  ++N LI G C   K  +A  +       G 
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           S  + TY  ++ GL K +R +D   ++ QM++EG   D   Y  L+        +K  A 
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
               M   G  PD  T  +L+ GL    ++ + S  +  +      L    YN +I GL+
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621

Query: 664 KEGLTSQASYLLDLMLGKGWV-PDATTHGLLV------GSSVGEEIDSRRFAFDSSSFPD 716
           ++  T++A  L   ML +    PDA ++ ++       G  + E +D      +    P+
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

Query: 717 SVS-DILAEGL 726
             S  +LAEGL
Sbjct: 682 FSSLYMLAEGL 692



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 224/475 (47%), Gaps = 12/475 (2%)

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
           +   +++  ++    ++GA+R+   M   G   S    NV++    +E R      F+ +
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
              + G  P+  T N L+  L +   ++ A++    M ++G  P+  T+  VI GL    
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V ++V +L +M           Y  +I  LC+EN++EEA  L +++ +  ++PD  T+ 
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---- 367
            LI  LC       A ++ E+M   G  P +  +  ++  LC  GK DE++N L+     
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
            C      +N L++  C A K   A+ I ++M    ++ +  ++N  I  LC++  +  A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +L+ +M++    PD  TY++ +   C+  + + A  + + +++     D ++Y  L+ G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSY 545
           LC+  ++  A ++   +   G +L+  ++N +I GL   RK  +AI L R +   +    
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644

Query: 546 TTSTYTKIMLGLV----KLQRAKDLLVVLAQ--MLVEGCALDVEAYCILIQSMSE 594
              +Y  +  GL      ++ A D LV L +   + E  +L + A  +L  SM E
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 172/647 (26%), Positives = 296/647 (45%), Gaps = 16/647 (2%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P H+  V+   ND  +ALK+F  V  +  F+HT +TY  MI KLGL G  E ME +  
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64

Query: 121 NMVKERYPNVREAL-ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
            M K     + E + I ++  +    +V  A+ V   M+    + SV  +N ++  +VE 
Sbjct: 65  EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY 124

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
              F+    VY  M   GI P+V T    ++    T R  +AL     M  +GC  N+ +
Sbjct: 125 GY-FSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  VI G    +   ++  +  EM   GI  ++  +  +I +LC++  ++E+ +LF  + 
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + P+  T+   I  LC    +D+A  +LE ++  GLTP    +  ++ G C+  K  
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL-EKMADRKIADCDSWNIPI 414
           E+  +L         P    +N ++   C AG    A  IL + M    I D  +++  I
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 415 RWLCENEEIRKA----YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
             LC + ++ +A    YE + +    S++     Y+  V G  K      AL++ + +  
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSII----LYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                D  +Y+ +V GLC++  +++A  +       GC     +FN LI G C  R +DK
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           AI +     S G +    TY  ++ GL K ++  +++     ML +GC  ++  Y ILI+
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV- 649
           S  +  K+ +    F  M   GL PD  T+ +L+ GL    +L         +  + +  
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             ++++NI+IN    +   S A  L   M G    PD  T+ +++ S
Sbjct: 600 YSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 32/373 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMV 194
           SL+    N   +N AM V       GFK S+ ++N ++  +   K+G     + + K+M+
Sbjct: 361 SLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL--SKQGLVLQALQLMKDMM 418

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G  P++ T N ++  L +   +  A         KGC P+  TF  +I G      +D
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ IL  M   GI  ++  Y  ++  LC+  KL+  +  FK M      P+ +TY  LI
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
              C++ ++ +A ++ ++M   GLTP       ++ GLC  G+ D++         +VT 
Sbjct: 539 ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL------FVTI 592

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                        KF  +  I              +NI I   C    +  A +L  +M 
Sbjct: 593 EKEY---------KFSYSTAI--------------FNIMINAFCXKLNVSMAEKLFHKMG 629

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            S   PD  TY   +   CK  N + A     +  ++ LV    +  K++  LC   +++
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 495 EAVEVFCCMSKNG 507
           EAV +   M +NG
Sbjct: 690 EAVVIINLMVQNG 702



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 58/343 (16%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L N  D++ A+ +F + +++K F+H+   Y  ++  L   G V +   L ++M++ 
Sbjct: 362 LINGLCNDGDMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420

Query: 126 R-YPNVREALISLVFSFVNHYRVNG---------AMRVLVNMNSGGFKLSVDVFNVVLGA 175
              P++        ++ V    VNG         A  +L +  + G    +  FN ++  
Sbjct: 421 GCSPDI------WTYNLV----VNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
             ++ R     + +   M+  GI P+V T N LL  L +  ++++ +D F+ M +KGC P
Sbjct: 471 YCKQ-RNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI--- 292
           N  T+ I+I+    + +V +++ +  EM   G+  ++     +I  LC   +L++A    
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589

Query: 293 ---------------------------------RLFKMMRALDLMPDELTYEELINCLCE 319
                                            +LF  M   D  PD  TY  +I+  C+
Sbjct: 590 VTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
              +D A+  L + I  GL P+      ++  LC   +  E+V
Sbjct: 650 TGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 171/750 (22%), Positives = 323/750 (43%), Gaps = 112/750 (14%)

Query: 24  ISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIF 83
           + S  C   IP       +  HQ   +++   S+R N++P              +AL  F
Sbjct: 62  LDSTQCKQLIP------HLSPHQ---FDSVFFSVRRNVNP-------------KTALNFF 99

Query: 84  KWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVN 143
            + S    F+ T  +YC ++  L ++G V     L   ++  + P        ++F    
Sbjct: 100 YFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLP--------VLFGDPK 151

Query: 144 --HYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR--GFADFVFVYKEMVKAGIV 199
             H  +  AM  L  +   G  ++V   ++++     + R  GF + + V++ +   G+ 
Sbjct: 152 NRHIEIASAMADLNEVGESG--VAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVF 209

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P V T  +LL  L + N +E +   F  M ++G  P+   F   I       +V+D++ +
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQL 268

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             +M  LG+   +  Y  +I  LC+   L+EA R  + M    +    +TY  LIN L +
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH--- 376
             + ++AN +L++ +  G TP + V+  ++ G C++G   +++    D      +P+   
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388

Query: 377 -NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N++++  C  G+   A+CILE+M  R  + +  ++   I WLC N     A   L  M+
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448

Query: 435 VSSVVP-----------------------------------DCATYSAFVLGKCKLCNYE 459
           + ++ P                                   +  T +A + G CK  N +
Sbjct: 449 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 508

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+R+ +++  +  VLD I+Y+ L+ G C+  K+ E  ++   M K G    + ++N+LI
Sbjct: 509 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLI 568

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           +G+C + K+D+A+ L +   S        TY  ++ G  K  + ++   +  ++L +   
Sbjct: 569 HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLE 628

Query: 580 LD-------VEAYC----------------------------ILIQSMSEQNKLKDCALF 604
           L+       + AYC                             LI  M    +++D    
Sbjct: 629 LNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCL 688

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            + M K GL+P+     +L+ G     Q+  V + + ++ S     +   Y ++I+G  K
Sbjct: 689 IDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSK 748

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G    A+ LL  M+GKG VPD  T+ +L 
Sbjct: 749 SGDMKTAAKLLHEMVGKGIVPDTVTYNVLT 778



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/625 (24%), Positives = 288/625 (46%), Gaps = 14/625 (2%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL 137
           +A+ +F++++ +  F  T  T   ++  L  A  +E+   + + M +   P+V     + 
Sbjct: 195 NAIGVFRFLANKGVFP-TVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVY-LFSTA 252

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKA 196
           + +F    +V  A+++  +M   G   +V  +N ++  +   K G  D  F +KE MVK 
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC--KHGNLDEAFRFKEKMVKD 310

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+   + T + L+  L +  +   A    +   +KG  PN   +  +I G      + D+
Sbjct: 311 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 370

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RALDLMPDELTYEELI 314
           + I G+M   GI         II   C+  ++E+A  + + M  R   + P   T   +I
Sbjct: 371 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT--TII 428

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCG 370
           + LC N R + A   L +M++  + P D +   +V GLC+ GK  ++V      LE   G
Sbjct: 429 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG 488

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
                 NAL+   C  G    A  +L+KM +R  + D  ++N  I   C+  ++ + ++L
Sbjct: 489 ANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 548

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
            G MV   + PD  TY+  + G C++   ++A+ ++ +  ++ LV +  +Y  +++G C+
Sbjct: 549 RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 608

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
            +KI E  ++F  +      L+S  +N LI   C      +A +L     S G   TT+T
Sbjct: 609 ADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTAT 668

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y+ ++ G+  + R +D   ++ +M  EG   +V  Y  LI    +  ++         M 
Sbjct: 669 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 728

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
              + P++ T   ++ G +    +   +  ++++V    V D+  YN+L NG  KEG   
Sbjct: 729 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 788

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           +   + D M  +G   D  T+  LV
Sbjct: 789 EGFKICDYMSQEGLPLDEITYTTLV 813



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 135/583 (23%), Positives = 245/583 (42%), Gaps = 50/583 (8%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYRVNGA 150
           F    + +CK        G VE+   L  +M K    PNV     +L+     H  ++ A
Sbjct: 249 FSTAINAFCK-------GGKVEDAIQLFFDMEKLGVSPNVV-TYNNLIHGLCKHGNLDEA 300

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
            R    M   G   ++  ++V++  +++ ++ F +   V KE ++ G  PN    N L++
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEK-FNEANSVLKETLEKGFTPNEVVYNTLID 359

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
              +   +  AL     M  KG  PNS T   +I+G     +++ +  IL EM   G  +
Sbjct: 360 GYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI 419

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
               +T II  LC  ++ E A+R  + M   ++ P++     L+  LC+  +  DA ++ 
Sbjct: 420 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 479

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNA 386
             ++  G          ++ GLC+ G   E+V  L+   + G+V     +N L+  CC  
Sbjct: 480 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 539

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           GK      +  +M  + I  D  ++N+ I  +C   ++ +A  L        +VP+  TY
Sbjct: 540 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 599

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI--------------------------- 478
              + G CK    E+  ++F ++  Q+L L+S+                           
Sbjct: 600 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 659

Query: 479 --------SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                   +YS L+ G+C + ++ +A  +   M K G   +   +  LI G C + ++DK
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
            + +     S        TYT ++ G  K    K    +L +M+ +G   D   Y +L  
Sbjct: 720 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 779

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              ++ K+++     + M + GL  D  T  +L+HG    S L
Sbjct: 780 GFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 155/345 (44%), Gaps = 31/345 (8%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+R+L  M   GF L    +N ++    +E +    F  +  EMVK GI P+  T N L+
Sbjct: 510 AVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK-LRGEMVKQGIEPDTFTYNLLI 568

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             +    +++ A++ +     +   PN  T+ ++I G     ++++   +  E+    ++
Sbjct: 569 HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLE 628

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
           L    Y  +I   CR     EA +L   MR+  + P   TY  LI+ +C   R++DA  +
Sbjct: 629 LNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCL 688

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
           +++M   GL P    +  ++ G C++G+ D+ VN L++   Y   P+             
Sbjct: 689 IDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI----------- 737

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
                              ++ + I    ++ +++ A +LL  MV   +VPD  TY+   
Sbjct: 738 -------------------TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT 778

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            G CK    E+  ++   +S + L LD I+Y+ LV G  Q   +T
Sbjct: 779 NGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALT 823



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 1/278 (0%)

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            N   R A  +   +    V P   T +  +    K    E +  VF  +  Q +  D  
Sbjct: 189 RNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVY 247

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            +S  +   C+  K+ +A+++F  M K G S +  ++N LI+GLC    +D+A R +   
Sbjct: 248 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 307

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G + T  TY+ ++ GL+KL++  +   VL + L +G   +   Y  LI    +   L
Sbjct: 308 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            D       MV  G+ P+  T+ S++ G     Q+      + +++S    ++   +  +
Sbjct: 368 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 427

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           I+ L        A   L  ML +   P+      LVG 
Sbjct: 428 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 465


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 171/750 (22%), Positives = 323/750 (43%), Gaps = 112/750 (14%)

Query: 24  ISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIF 83
           + S  C   IP       +  HQ   +++   S+R N++P              +AL  F
Sbjct: 129 LDSTQCKQLIP------HLSPHQ---FDSVFFSVRRNVNP-------------KTALNFF 166

Query: 84  KWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVN 143
            + S    F+ T  +YC ++  L ++G V     L   ++  + P        ++F    
Sbjct: 167 YFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLP--------VLFGDPK 218

Query: 144 --HYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR--GFADFVFVYKEMVKAGIV 199
             H  +  AM  L  +   G  ++V   ++++     + R  GF + + V++ +   G+ 
Sbjct: 219 NRHIEIASAMADLNEVGESG--VAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVF 276

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P V T  +LL  L + N +E +   F  M ++G  P+   F   I       +V+D++ +
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             +M  LG+   +  Y  +I  LC+   L+EA R  + M    +    +TY  LIN L +
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH--- 376
             + ++AN +L++ +  G TP + V+  ++ G C++G   +++    D      +P+   
Sbjct: 396 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 455

Query: 377 -NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N++++  C  G+   A+CILE+M  R  + +  ++   I WLC N     A   L  M+
Sbjct: 456 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 515

Query: 435 VSSVVPD-----------------------------------CATYSAFVLGKCKLCNYE 459
           + ++ P+                                     T +A + G CK  N +
Sbjct: 516 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 575

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+R+ +++  +  VLD I+Y+ L+ G C+  K+ E  ++   M K G    + ++N+LI
Sbjct: 576 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLI 635

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           +G+C + K+D+A+ L +   S        TY  ++ G  K  + ++   +  ++L +   
Sbjct: 636 HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLE 695

Query: 580 LD-------VEAYC----------------------------ILIQSMSEQNKLKDCALF 604
           L+       + AYC                             LI  M    +++D    
Sbjct: 696 LNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCL 755

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            + M K GL+P+     +L+ G     Q+  V + + ++ S     +   Y ++I+G  K
Sbjct: 756 IDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSK 815

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G    A+ LL  M+GKG VPD  T+ +L 
Sbjct: 816 SGDMKTAAKLLHEMVGKGIVPDTVTYNVLT 845



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 148/611 (24%), Positives = 282/611 (46%), Gaps = 14/611 (2%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL 137
           +A+ +F++++ +  F  T  T   ++  L  A  +E+   + + M +   P+V     + 
Sbjct: 262 NAIGVFRFLANKGVFP-TVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVY-LFSTA 319

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKA 196
           + +F    +V  A+++  +M   G   +V  +N ++  +   K G  D  F +KE MVK 
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC--KHGNLDEAFRFKEKMVKD 377

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+   + T + L+  L +  +   A    +   +KG  PN   +  +I G      + D+
Sbjct: 378 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 437

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RALDLMPDELTYEELI 314
           + I G+M   GI         II   C+  ++E+A  + + M  R   + P   T   +I
Sbjct: 438 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT--TII 495

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCG 370
           + LC N R + A   L +M++  + P D +   +V GLC+ GK  ++V      LE   G
Sbjct: 496 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG 555

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
                 NAL+   C  G    A  +L+KM +R  + D  ++N  I   C+  ++ + ++L
Sbjct: 556 ANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 615

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
            G MV   + PD  TY+  + G C++   ++A+ ++ +  ++ LV +  +Y  +++G C+
Sbjct: 616 RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 675

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
            +KI E  ++F  +      L+S  +N LI   C      +A +L     S G   TT+T
Sbjct: 676 ADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTAT 735

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y+ ++ G+  + R +D   ++ +M  EG   +V  Y  LI    +  ++         M 
Sbjct: 736 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 795

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
              + P++ T   ++ G +    +   +  ++++V    V D+  YN+L NG  KEG   
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855

Query: 670 QASYLLDLMLG 680
           +   L +  +G
Sbjct: 856 EGKLLAEDGVG 866



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 1/278 (0%)

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            N   R A  +   +    V P   T +  +    K    E +  VF  +  Q +  D  
Sbjct: 256 RNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVY 314

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            +S  +   C+  K+ +A+++F  M K G S +  ++N LI+GLC    +D+A R +   
Sbjct: 315 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 374

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G + T  TY+ ++ GL+KL++  +   VL + L +G   +   Y  LI    +   L
Sbjct: 375 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 434

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            D       MV  G+ P+  T+ S++ G     Q+      + +++S    ++   +  +
Sbjct: 435 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 494

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           I+ L        A   L  ML +   P+      LVG 
Sbjct: 495 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 532



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 9/210 (4%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ E++   +  N    N L+           A      M  KG  P + T+  +I G+ 
Sbjct: 685 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 744

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R++D+  ++ EM   G+   +  YT +I   C+  ++++ + + + M + D+ P+++
Sbjct: 745 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 804

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +I+   ++  +  A  +L +M+  G+ P    +  +  G C+ GK +E     ED 
Sbjct: 805 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDG 864

Query: 369 CGYVTSP----HNALLECCCN----AGKFF 390
            G+  SP    H A   C       A KFF
Sbjct: 865 VGF-NSPLFLIHEAFRACTRRVDLWAKKFF 893


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 165/682 (24%), Positives = 307/682 (45%), Gaps = 55/682 (8%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           D L+  L   +D  +AL++      ++ F  ++  Y +++ KLG AG  + MEGL + M 
Sbjct: 57  DRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMR 116

Query: 124 KERYPNVREALI-SLVFSFVNHYRVNGAMRVLVN-MNSGGFKLSVD--VFNVVLGAIVEE 179
           +E +  VR  ++ S V S+    R + A+ +++N +++  F +  D  VFN +L  +VE 
Sbjct: 117 REGH-QVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEG 175

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            +       VY EM   GI P+V TLN L++ L   +++ +A+     M   G  P+  T
Sbjct: 176 SK-LKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETT 234

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F  +++G I    ++ ++ +  +M + G          +I   C+  ++E+A+   +   
Sbjct: 235 FTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEI 294

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           A    PD++TY   ++ LC+N  +  A  +++ M+  G  P  DVF              
Sbjct: 295 ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP--DVFT------------- 339

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
                           +N ++ C    G+   AK I+ +M DR  + D  ++N  I  L 
Sbjct: 340 ----------------YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALS 383

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
               + +A +L   + V  + PD  T++  +   CK+ +    +R+F ++ +     D +
Sbjct: 384 SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEV 443

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ L++ LC + K+  A+++   M  NGC  S+ ++N +I  LC   ++++A  +    
Sbjct: 444 TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQM 503

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            + G S +  T+  ++ GL K +R  D   ++ QM+ EG   +   Y  ++    +Q  +
Sbjct: 504 DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNI 563

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           K  A     M   G   D  T  +L++GL    +  +    +  +           YN +
Sbjct: 564 KKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPV 623

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEID------SRR 706
           I  L++      A  L   M   G  PDA T+ ++       G  + E  D      ++ 
Sbjct: 624 IQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKG 683

Query: 707 FAFDSSSFPDSVSDILAEGLGN 728
           F  + SSF      +LAEGL N
Sbjct: 684 FMPEFSSF-----RMLAEGLLN 700


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 164/594 (27%), Positives = 274/594 (46%), Gaps = 25/594 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           +Y  +I  L  AG + +   L Q ++         A  SL+         + A  +  +M
Sbjct: 12  SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           N  G   S   +NV++ A    KRG   +   + K+M++ G VP+V T N +++ L +++
Sbjct: 72  NRRGCPPSPVTYNVMIDASC--KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS 129

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+E AL  F  M + GC PN R+   +I GL   S++D +  +  EM    I  +   Y 
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYG 189

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  L +  KL EA +LF+ M    + P  +TY  +I+ +C    LD+A ++ + M   
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAGKFFLA 392
           G  P+   F  ++   C+ GK DE+   L+     G+V     ++ L+   C+  +   A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + +LE M  R+      + N  I  LC+   I++A E+L  MV S   PD  TY+  V G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+    E A  +   + A+ L  + ++Y+ LV GLC+  ++ EA  VF  M  +GC+ +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL- 570
             ++  LI G C   +VD  ++L      +G S     Y  +   L K  R+   L +L 
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489

Query: 571 -AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             +  +   A   E Y   +  + E  K++    F   MV+ G +P  E   SL+ GL  
Sbjct: 490 EGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 549

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
             Q      G  + V + E++D      L  G    G   +A+  ++ M+GKG+
Sbjct: 550 SGQ-----GGEARAVLE-EIMD------LAYGGKARG---KAAKFVEEMVGKGY 588



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 231/507 (45%), Gaps = 36/507 (7%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   ++ +M + G  P+  T N +++   +   +E A D  ++M + G  P+  T+  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           V+ GL  +SRV++++ +  EM  LG       +  II  LC+++K+++A ++F  M A D
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD  +Y  LI+ L +  +L++A  + + M+  G+TP+   +  ++ G+C     DE++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
              +           ++    C   +F                   ++NI I   C+  +
Sbjct: 241 ELFK-----------SMRSKGCRPSRF-------------------TFNILIDAHCKRGK 270

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A+ LL RM     VPD  TYS  + G C +   +DA  +   +  +      ++ + 
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ GLC+  +I EA EV   M  +G S    ++N L++G C   + ++A  L S   + G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +    TYT ++ GL K  R  +   V AQM   GCA ++  Y  LI       ++    
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNIL 658
             F  MV AG+ PD     +L   L    +    L ++  G   L   SE     +Y   
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL--RSEAWGDEVYRFA 508

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVP 685
           ++GL + G    A   +  M+  G +P
Sbjct: 509 VDGLLEAGKMEMALGFVRDMVRGGQLP 535



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 199/402 (49%), Gaps = 5/402 (1%)

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M   ++ PD  +Y  LI+ L +  +L+DA ++ + ++  G+TP+   +  ++ GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 358 FDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNI 412
           FD++     D  + G   SP  +N +++  C  G    A  +++KM  D  + D  ++N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            +  LC++  + +A  L   M      P+  +++  +LG C+    + A +VF ++ A+ 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           +  DS SY  L++GL +  K+ EA ++F  M  +G + S+ ++N++I+G+C+   +D+A+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L     S G   +  T+  ++    K  +  +   +L +M  +G   DV  Y  LI  +
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
               ++ D       MVK    P   T  +L+HGL    ++      ++ +VS  +  D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             YN L++G  + G T +A  LL  M+ +G  P+  T+  LV
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 221/488 (45%), Gaps = 5/488 (1%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M +  + P+  +   L++ L +  ++  A + F+++   G  P++  +  +I GL   + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            DD+  +  +M   G       Y  +I   C+   LEEA  L K M     +PD +TY  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +++ LC++ R+++A  +  +M  +G TP       I+ GLC+  K D++     +     
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
             P    +  L++    AGK   A  + ++M D  I     ++N+ I  +C    + +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           EL   M      P   T++  +   CK    ++A R+ ++++    V D ++YS L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C + ++ +A  +   M K  C  +  + N LI+GLC   ++ +A  +     SSG S   
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ G  +  + +    +L+ M+  G A +V  Y  L+  + + N+L +    F  
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M  +G  P+  T  +L+ G     Q+        ++V      D  +Y  L   L K G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 668 TSQASYLL 675
           +++A  +L
Sbjct: 481 SARALEIL 488



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 203/467 (43%), Gaps = 30/467 (6%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M+++   P+S ++ I+I GL    +++D+ ++  ++   G+      YT +I  LC  N 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            ++A  LF  M      P  +TY  +I+  C+   L++A D+++ MI  G  P    +  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           ++ GLC+  + +E++              N +    C   +                   
Sbjct: 121 VMDGLCKSSRVEEALLLF-----------NEMERLGCTPNR------------------- 150

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S N  I  LC+  +I +A ++   M    + PD  +Y   + G  K     +A ++F++
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQR 210

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +    +   +++Y+ ++ G+C    + EA+E+F  M   GC  S  +FNILI   C   K
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D+A RL       G      TY+ ++ GL  + R  D   +L  M+   C   V     
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI  + +  ++K+     + MV +G  PD  T  +L+HG     Q       ++ +V+  
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   Y  L++GL K     +A  +   M   G  P+  T+  L+
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 163/594 (27%), Positives = 273/594 (45%), Gaps = 25/594 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           +Y  +I  L  AG + +   L Q ++         A  SL+         + A  +  +M
Sbjct: 12  SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           N  G   S   +NV++ A    KRG   +   + K+M++ G VP+V T N +++ L ++ 
Sbjct: 72  NRRGCPPSPVTYNVIIDASC--KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSG 129

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+E AL  F  M + GC PN R+   +I GL   S++D +  +  EM    I  +   Y 
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  L +  KL EA +LF+ M    + P  +TY  +I+ +C    LD+A ++ + M   
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAGKFFLA 392
           G  P+   F  ++   C+ GK DE+   L+     G+V     ++ L+   C+  +   A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + +LE M  R+      + N  I  LC+   I++A E+L  MV S   PD  TY+  V G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+    E A  +   + A+ L  + ++Y+ LV GLC+  ++ EA  VF  M  +GC+ +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL- 570
             ++  LI G C   +VD  ++L      +G S     Y  +   L K  R+   L +L 
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489

Query: 571 -AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             +  +   A   E Y   +  + +  K++    F   MV+ G +P  E   SL+ GL  
Sbjct: 490 EGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 549

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
             Q      G  + V + E++D      L  G    G   +A+  ++ M+GKG+
Sbjct: 550 SGQ-----GGEARAVLE-EIMD------LAYGGKARG---KAAKFVEEMVGKGY 588



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 228/507 (44%), Gaps = 36/507 (7%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   ++ +M + G  P+  T N +++   +   +E A D  ++M + G  P+  T+  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           V+ GL  + RV++++ +  EM  LG       +  II  LC+++K+++A ++F  M A D
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD  +Y  LI+ L +  +L++A  +   M+  G+TP+   +  ++ G+C     DE++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
              +           ++    C   +F                   ++NI I   C+  +
Sbjct: 241 ELFK-----------SMRSKGCRPSRF-------------------TFNILIDAHCKRGK 270

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A+ LL RM     VPD  TYS  + G C +   +DA  +   +  +      ++ + 
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ GLC+  +I EA EV   M  +G S    ++N L++G C   + ++A  L S   + G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +    TYT ++ GL K  R  +   V AQM   GCA ++  Y  LI       ++    
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNIL 658
             F  MV AG+ PD     +L   L    +    L ++  G   L   SE     +Y   
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL--RSEAWGDEVYRFA 508

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVP 685
           ++GL   G    A   +  M+  G +P
Sbjct: 509 VDGLLDAGKMEMALGFVRDMVRGGQLP 535



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 199/402 (49%), Gaps = 5/402 (1%)

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M   ++ PD  +Y  LI+ L +  +L+DA D+ + ++  G+TP+   +  ++ GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 358 FDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNI 412
           FD++     D  + G   SP  +N +++  C  G    A  +++KM  D  + D  ++N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            +  LC++  + +A  L   M      P+  +++  +LG C+    + A +VF ++ A+ 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           +  DS SY  L++GL +  K+ EA ++F  M  +G + S+ ++N++I+G+C+   +D+A+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L     S G   +  T+  ++    K  +  +   +L +M  +G   DV  Y  LI  +
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
               ++ D       MVK    P   T  +L+HGL    ++      ++ +VS  +  D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             YN L++G  + G T +A  LL  M+ +G  P+  T+  LV
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 220/488 (45%), Gaps = 5/488 (1%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M +  + P+  +   L++ L +  ++  A D F+++   G  P++  +  +I GL   + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            DD+  +  +M   G       Y  II   C+   LEEA  L K M     +PD +TY  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +++ LC++ R+++A  +  +M  +G TP       I+ GLC+  K D++     +     
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
             P    +  L++    AGK   A  +  +M D  I     ++N+ I  +C    + +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           EL   M      P   T++  +   CK    ++A R+ ++++    V D ++YS L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C + ++ +A  +   M K  C  +  + N LI+GLC   ++ +A  +     SSG S   
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ G  +  + +    +L+ M+  G A +V  Y  L+  + + N+L +    F  
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M  +G  P+  T  +L+ G     Q+        ++V      D  +Y  L   L K G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 668 TSQASYLL 675
           +++A  +L
Sbjct: 481 SARALEIL 488



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 203/467 (43%), Gaps = 30/467 (6%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M+++   P+S ++ I+I GL    +++D+  +  ++   G+      YT +I  LC  N 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            ++A  LF  M      P  +TY  +I+  C+   L++A D+++ MI  G  P    +  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           ++ GLC+ G+ +E++              N +    C   +                   
Sbjct: 121 VMDGLCKSGRVEEALLLF-----------NEMERLGCTPNR------------------- 150

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S N  I  LC+  +I +A ++   M    + PD  +Y   + G  K     +A ++FR+
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRR 210

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +    +   +++Y+ ++ G+C    + EA+E+F  M   GC  S  +FNILI   C   K
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D+A RL       G      TY+ ++ GL  + R  D   +L  M+   C   V     
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI  + +  ++K+     + MV +G  PD  T  +L+HG     Q       ++ +V+  
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   Y  L++GL K     +A  +   M   G  P+  T+  L+
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 225/460 (48%), Gaps = 6/460 (1%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C PN  TF +V+K      ++ D   +  +M D GI  +   Y  +I    ++ +++EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           RL++ M ++ L P   TY  L+N  C+  ++ +A ++ + M   G  P    +  I+ GL
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 353 CEVGKFDESVNFL-----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IAD 406
           C+ GK  E++  L     E  C   T  +NAL+   C       A  +LE+MA +  + D
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  +  LC   ++ +A +    M      PD   Y+  +    K    ++A+++F+
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            V A+  + D+++Y+ ++ GL +   + EA E+F  M  +GC+ + ++++I++ G C  +
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           KVD A ++       G      TY  ++ GL K         + + M+  GCA D+ +Y 
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           +++  + + NK+ D  + F+ M++  LVPD  T   L+ GL    +L      ++++   
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               D   YN L+NGL K+G   QA  L   M  KG++ D
Sbjct: 424 GCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 216/458 (47%), Gaps = 13/458 (2%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            F VVL +  ++ +   D   ++++M+  GI P+    N L++   +  R++ A   +  
Sbjct: 10  TFRVVLKSFCKQGK-LRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M   G  P+  T+  ++      +++ +++ +   M + G + ++  Y+ II  LC+  K
Sbjct: 69  MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128

Query: 288 LEEAIR-LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           + EA+  LF  M       + + Y  LIN LC++  ++ A  +LE+M   G  P +  + 
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA-KCILEKMAD 401
            I+ GLC +GK  E+  F +       SP    +N LL+     GK   A K   + +A 
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
             + D  ++N  +  L     + +A E+  +MV S   P+ ATYS  + G C+    +DA
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
            +V  ++S    V D ++Y+ L++GLC+   + +A E+F  M  NGC+    S+++++ G
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 368

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGC 578
           LC   KV  A  L              T+  +M GL    KL  AKDL   L QM   GC
Sbjct: 369 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL---LDQMTCSGC 425

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           A D  AY  L+  + +Q +          M + G + D
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 192/433 (44%), Gaps = 30/433 (6%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G V+E   L + MV            SL+ +F    ++  AM +   M   GF+  V  +
Sbjct: 57  GRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTY 116

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           + ++  + +  +       ++ +M++ G   N    N L+  L +   IE A      M 
Sbjct: 117 STIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 176

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
            KG  P++ T+  ++ GL    +V ++      M   G   ++  Y  ++  L +E K +
Sbjct: 177 SKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTD 236

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           EA++LFK + A   MPD +TY  ++  L     +D+A ++ + M+  G  P    +  ++
Sbjct: 237 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVL 296

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS 409
            G C   K D++   LE+                            + K+    + D  +
Sbjct: 297 SGHCRAKKVDDAHKVLEE----------------------------MSKIG--AVPDVVT 326

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +NI +  LC+   + KA+EL   MV +   PD  +YS  + G CK     DA  +F ++ 
Sbjct: 327 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + LV D ++++ L++GLC+  K+ EA ++   M+ +GC+    ++N L+ GL    +  
Sbjct: 387 ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHI 446

Query: 530 KAIRLRSLAYSSG 542
           +A RL       G
Sbjct: 447 QADRLTQAMKEKG 459



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 8/355 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L  T  ++ AL++     I++        Y  +I  L    N+E    L + M  +
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            Y        +++       +V+ A +   +M S G+   V  +N +L A+ +E +   +
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT-DE 237

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + ++K+++  G +P+  T N +L  L   + ++ A + F++M   GC PN  T+ IV+ 
Sbjct: 238 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLS 297

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G     +VDD+  +L EM  +G   ++  Y  ++  LC+ N +++A  LF  M      P
Sbjct: 298 GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D ++Y  ++N LC+  ++ DA  + + MI   L P    F  ++ GLC+ GK DE+ + L
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417

Query: 366 ED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIR 415
           +      C      +N L+      G+   A  + + M ++  ++DC  +  P+R
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC--FKAPLR 470


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 179/712 (25%), Positives = 330/712 (46%), Gaps = 31/712 (4%)

Query: 4   KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDM-IKSHQTTDYEA--------KI 54
           +  SL+ S   I  +   SC +S    N    S    M ++S   T++E+        K+
Sbjct: 11  RTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWESLLEPFDLTKL 70

Query: 55  QSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           +  R  ++P  L ++L+   D+ + L+IF+ V  QK + HT D Y   I KLG  G  + 
Sbjct: 71  RKSRILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKL 130

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG----AMRVLVNMNSGGF-KLSVDVF 169
           ++ L   M KE     RE++  ++   + HY   G    A+R+L++M +    + +   +
Sbjct: 131 IDKLLMQM-KEEGIVFRESIFMII---MKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSY 186

Query: 170 NVVLGAIVEEK-RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           ++VL  +V       A  VF   +M+  G+ P V T   +++ L   N ++SA    R M
Sbjct: 187 DLVLEILVTGNCPQVATNVFY--DMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDM 244

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K GC PNS  ++ +I  L   ++V +++ +L EMF +G   ++  +  +I  LC+ NK+
Sbjct: 245 TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKI 304

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A +L   M      PD +TY  L++ LC   +L++A  IL  +      P + +   +
Sbjct: 305 HDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTL 360

Query: 349 VRGLCEVGKFDESVNFL-EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           + G    G+  E+ +FL E    +   P    +N L+   C  G    A+ ++ +M+ R 
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              +  ++ I +  LC+   + +A  +L  M    +  +   Y+  +   C+      AL
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++  +    D  +Y+ L+ GLC+V++I EA  +F  M  +G   ++ ++N LI+ L
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
                  KA+ L +     G +    TY  ++    K+   +  L +  QM+++G   D 
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            +  I+I  + +  K+ +   F    +  G VPD  T  S+L+GL    ++    +  ++
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L  +    D+  YN  I+   KEG+ + A       +  G+VP   T  +LV
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 115/528 (21%), Positives = 225/528 (42%), Gaps = 54/528 (10%)

Query: 58  RHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           +H   P+      LI  L   N +S ALK+ + + +         T+  +I  L     +
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD-VQTFNDVIHGLCKVNKI 304

Query: 113 EEMEGLCQNMV-KERYPNVREALISLVFSFVNHY-----RVNGAMRVLVNMN-SGGFKLS 165
            +   L   M+ +  YP+      ++ + F+ H      ++N A ++L+ +       L+
Sbjct: 305 HDATKLVDRMLLRGFYPD------NMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILN 358

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
             +   V+   ++E + F +     + M+  G  P++ T N L+  L +   +  A D  
Sbjct: 359 TLINGYVMSGQLKEAQSFLN-----ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             M ++GC PN  T+ I++ GL     ++++  +L EM   G+ +    Y C+I  LCR+
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            K+  A+ L   M      PD  TY  LI  LC+  R+D+A  +  +M++ G    +  +
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
             ++  L   G F +++  + D                          C L+K+      
Sbjct: 534 NTLIHALLRRGAFQKALTLVND---------------------MLFRGCTLDKI------ 566

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
              ++N  I+  C+   I K  EL  +M++  +  D  + +  + G CK+   ++A    
Sbjct: 567 ---TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFL 623

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           R    +  V D ++Y+ ++ GLC+V +I EA+ +F  +   G    + ++N  I   C  
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKE 683

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
             V+ A         +G   +  T+  ++  L+K    ++   VL ++
Sbjct: 684 GMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 177/662 (26%), Positives = 295/662 (44%), Gaps = 40/662 (6%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSS--ALKIFKWVS-IQKRFQHTADT 98
           I SH         Q L  NLSP H+  + +N  DL+   AL+ F  +  I+  F+HT  +
Sbjct: 63  ILSHPKWQRHPSFQKLIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKS 122

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           +   +LK+ +  N   + G+ + +            IS++ + V+   +   +  L  MN
Sbjct: 123 H-SFLLKILIPNN---LFGVGEKI-----------RISMIKACVSVDDIRFLLDFLRQMN 167

Query: 159 SGG----FKLSVDVFNVVLGAIV------EEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
                  FKLSV  +N +L  +       E KR       VY EM+   IVPN+ TLN +
Sbjct: 168 RDDNDIKFKLSVRSYNELLMMLARFLMIDEMKR-------VYTEMLNDMIVPNIYTLNTM 220

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           +    +   I  A     ++ + G  P+S T+  +I G   N+ V+ +  +   M + G 
Sbjct: 221 VNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGC 280

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           +     YT II  LC   +++E I LFK MR  D  P   TY  +I+ L  N R  +  D
Sbjct: 281 RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMD 340

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCC 384
           +  +M      P    +  +V  +C+  K DES   L +  + G V S   +NAL+   C
Sbjct: 341 LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYC 400

Query: 385 NAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G+   A  IL  M        + ++N  I    + + + KA  LL +M+ S + P   
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV 460

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY++ +  +CK  +++ A ++   +    LV D  +YS  ++ LC+ +++ EA ++F  +
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL 520

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G   +   +  LI G C   K+D+AI L    +S      +STY  ++ G+ K  + 
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           ++ L ++  M   G    V  Y ILI+ M  +         FN MV  G  PD  T  + 
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +H       +      + +++    + DS  Y +LI+   + GL   A  +L  ML  G 
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700

Query: 684 VP 685
            P
Sbjct: 701 DP 702



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 230/482 (47%), Gaps = 16/482 (3%)

Query: 50  YEAKIQSLRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMIL 104
           Y +KI   +  LSPD      LI      ND++SA K+F  +   K  +    +Y  +I 
Sbjct: 236 YVSKI--FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMP-NKGCRRNEVSYTTIIH 292

Query: 105 KLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
            L  AG ++E   L + M ++  YP VR   + +   F N   + G M +   M     +
Sbjct: 293 GLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG-MDLFNEMRERSCE 351

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            +V  + V++ A+ +E R   +   +  EM++ G+VP+V T N L+    E  RIE+AL+
Sbjct: 352 PNVHTYTVMVDAMCKE-RKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALE 410

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
               M    C PN RT+  +I G      V  ++++L +M +  +   L  Y  +I + C
Sbjct: 411 ILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQC 470

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +    + A +L  +++   L+PD+ TY   I+ LC++ R+++A D+   +   G+   + 
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530

Query: 344 VFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           ++  ++ G C+ GK DE+++ LE    + C   +S +N+L+   C  GK      ++E M
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
           +   +     ++ I I  +    +   A  +  +MV     PD  TY+AF+   C   N 
Sbjct: 591 SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNV 650

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ++A  +  ++    ++ DS++Y+ L+    ++    +A  V   M   GC  S   +N L
Sbjct: 651 KEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710

Query: 519 IY 520
           I+
Sbjct: 711 IW 712



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/507 (20%), Positives = 218/507 (42%), Gaps = 16/507 (3%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           ++K G    V + ++LL++L   N     + +  R+     C +      ++  L   +R
Sbjct: 111 LIKPGFKHTVKSHSFLLKILIPNNLF--GVGEKIRISMIKACVSVDDIRFLLDFLRQMNR 168

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            D+         D+  +L +  Y  ++ ML R   ++E  R++  M    ++P+  T   
Sbjct: 169 DDN---------DIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNT 219

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC---EVGKFDESVNFLEDK- 368
           ++N   +   + +AN  +  +   GL+P    +  ++ G C   +V    +  N + +K 
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAY 427
           C      +  ++   C AG+      + +KM  D       ++ + I  L  N+   +  
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L   M   S  P+  TY+  V   CK    +++ R+  ++  + LV   ++Y+ L+ G 
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  +I  A+E+   M  N C  +  ++N LI G    + V KA+ L S    S  + + 
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++    K         +L  +   G   D   Y + I ++ +  ++++    FN 
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           + + G+  +     +L+ G     ++    S + ++ S+  + +SS YN LI G+ KEG 
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
             +   +++ M   G  P   T+ +L+
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILI 606


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 180/730 (24%), Positives = 321/730 (43%), Gaps = 109/730 (14%)

Query: 52  AKIQSLRHNLSP---DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           AK + L  +LSP   D     L +  +  +AL  F +VS   +F+ TA +YC +I  L  
Sbjct: 73  AKCKELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLL-- 130

Query: 109 AGN--VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
            GN  +     L   ++  + P    A  +  F    H+ +   M          F L  
Sbjct: 131 VGNDLLSPARLLLIRLIDGKVP----AFYARNFE-SRHFEIAQIM--------ADFNL-- 175

Query: 167 DVFNVVLGAIVEE-----------KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            VF  V+G  + +             GF     V+  + K G+ P++ T  +LL  L + 
Sbjct: 176 -VFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKA 234

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ + + +  +   G  P+   F  +I       R DD++ +  +M  LG+   +  Y
Sbjct: 235 NELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTY 294

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             II  LC+  +L+EA R  + M    + P  +TY   IN L +  ++D+AN +L++M  
Sbjct: 295 NNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSE 354

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFL 391
           +G  P + V+  ++ G C++G   E++   +D      SP+    N+L++  C + +   
Sbjct: 355 LGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQ 414

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRW---------------------------------- 416
           A+ +LE+M  R +  +  S+++ I W                                  
Sbjct: 415 AENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVS 474

Query: 417 -LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC+  +  +A EL  R++    VP+  T +A + G CK  N ++ L++ R +  + LV 
Sbjct: 475 GLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVF 534

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D I+Y+ L+ G C+  K+ E  E+   M K G      +FN+L++GLC   K+D+A RL 
Sbjct: 535 DRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLW 594

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD-------VEAYCI- 587
                +G      TY  ++ G  K  + ++   +L +++ +   L+       + AYCI 
Sbjct: 595 HECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCIN 654

Query: 588 --------LIQSMSEQNKLKDCALF-------------------FNVMVKAGLVPDRETM 620
                   L   M  +  L  CA +                    + M K GL+P+    
Sbjct: 655 GNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCY 714

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +++ G +   Q++ V+  + ++ S +   +   Y I+I+G  K G T +A+ LL+ M  
Sbjct: 715 TTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTE 774

Query: 681 KGWVPDATTH 690
           KG +PDA T+
Sbjct: 775 KGILPDAVTY 784



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 251/575 (43%), Gaps = 41/575 (7%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           GG    V +F+ ++ A  +  R   D + ++ +M K G+ PNV T N ++  L ++ R++
Sbjct: 250 GGIIPDVHLFSTMINAFCKGHRE-DDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLD 308

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A     +M K+   P+  T+ + I GLI   ++D++  +L EM +LG       Y  +I
Sbjct: 309 EAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLI 368

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              C+   + EA+++   M +  + P+ +T   LI   C++ ++  A ++LE+MI  GL 
Sbjct: 369 DGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLP 428

Query: 340 -----------------------------------PTDDVFVDIVRGLCEVGKFDESVNF 364
                                              P D +   +V GLC+ GK  E+V  
Sbjct: 429 INQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL 488

Query: 365 LEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
                G    P+    NAL+   C AG       +L  M +R +  D  ++N  I   C+
Sbjct: 489 WCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCK 548

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++++ +EL   MV   + PD  T++  + G C     ++A R++ +      V +  +
Sbjct: 549 EGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYT 608

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y  +++G C+  K+ E   +   +      L+S  +N LI   C+   ++ A RLR    
Sbjct: 609 YGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMK 668

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S G   + +TY+ +M GL  +    D   +L +M  EG   +V  Y  +I   S+  ++ 
Sbjct: 669 SRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMN 728

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
              +    M    + P++ T   ++ G     +    +  +N++     + D+  YN   
Sbjct: 729 KVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFT 788

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           NGL KEG   +A  + D M       D  T+  L+
Sbjct: 789 NGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 176/385 (45%), Gaps = 38/385 (9%)

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           E +E  C+ + K   PN+  +  +L+        +   +++L +M   G       +N +
Sbjct: 484 EAVELWCRLLGKGFVPNIVTS-NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL 542

Query: 173 LGAIVEE---KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           +    +E   K GF     + +EMVK GI P++ T N LL  L   ++I+ A   +    
Sbjct: 543 ISGCCKEGKVKEGFE----LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK 598

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K G  PN  T+ ++I G    ++V++  ++L E+    ++L    Y  +I   C    + 
Sbjct: 599 KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMN 658

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
            A RL   M++  ++    TY  L++ LC    +DDA  +L++M   GL P    +  I+
Sbjct: 659 AAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTII 718

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS 409
            G  ++G+ ++    L++      S HN       +  KF                   +
Sbjct: 719 GGYSKLGQMNKVNIVLQE-----MSSHNI------HPNKF-------------------T 748

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           + I I   C+  + ++A +LL  M    ++PD  TY+AF  G CK    E+A +V  ++S
Sbjct: 749 YTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS 808

Query: 470 AQSLVLDSISYSKLVEGLCQVEKIT 494
           + ++ LD I+Y+ L++G  Q    T
Sbjct: 809 SGAVCLDEITYTTLIDGCHQPSTAT 833



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 171/405 (42%), Gaps = 32/405 (7%)

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A  +F ++    L P   T   L++ L +   L  + ++ + + + G+ P   +F  ++ 
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDS 409
             C+  + D+++                                +  KM    +A +  +
Sbjct: 265 AFCKGHREDDAIG-------------------------------LFSKMEKLGVAPNVVT 293

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I  LC++  + +AY    +MV   V P   TYS F+ G  KL   ++A  V +++S
Sbjct: 294 YNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMS 353

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
               V + + Y+ L++G C++  I+EA+++   M   G S +S + N LI G C   ++ 
Sbjct: 354 ELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIG 413

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A  +       G      +++ ++  L    R    L  + +ML+     +      L+
Sbjct: 414 QAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLV 473

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
             + +  K  +    +  ++  G VP+  T  +L+HGL     +      +  ++    V
Sbjct: 474 SGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLV 533

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            D   YN LI+G  KEG   +   L + M+ KG  PD  T  LL+
Sbjct: 534 FDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLL 578


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 173/670 (25%), Positives = 300/670 (44%), Gaps = 36/670 (5%)

Query: 30  ANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQ 89
           +  + LS++   I S         ++ L  +L+P H+  +     D  +AL  F W++++
Sbjct: 35  SEPVDLSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALR 94

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL-ISLVFSFVNHYRVN 148
             F+H   +Y  M+       N+         +++ R   V E + IS++ S  +   V 
Sbjct: 95  PGFKHNVHSYSSML-------NI---------LIRARLLGVAEKIRISMIKSCCSIEDVL 138

Query: 149 GAMRVLVNMNSGG---FKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVP 200
             + V   MN+ G   FK ++  +N +L ++     ++E +       VY E++   I P
Sbjct: 139 FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKT------VYLELLNNQISP 192

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N+ T N ++    +   +  A     ++ + G  P++ T+  +I G   N  VD++  + 
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
             M   G Q     YT +I  LC   ++ EA++LF  M   +  P   TY  LI  L  +
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PH 376
            R  +A ++  +M   G  P    +  ++ GLC+  K DE+   L +  + G + S   +
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NAL++  C  G    A  IL+ M       +  ++N  I  LC+  ++ KA  LL +M+ 
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P   TY++ + G+CK+ + E A R+   ++   LV D  +YS  ++ LC+  ++ E
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  +F  +   G   +   +  LI G C + K+D A  L     +      + TY  ++ 
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL K ++ K+   ++A+ML  G    V  Y ILI  M +          FN MV  G  P
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  + LH       L  V   I K+  +  + D   Y +LI+G  + GLT +A   L
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672

Query: 676 DLMLGKGWVP 685
             M+  G  P
Sbjct: 673 KCMVDTGCKP 682



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 152/643 (23%), Positives = 288/643 (44%), Gaps = 27/643 (4%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREAL 134
           + +A ++F  +  QK  Q    +Y  +I  L  AG + E   L  +M ++   P VR   
Sbjct: 245 VDNAYEVF-LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
           + L+++     R   A+ +   M   G + +V  + V++  + +E +   +   +  EM 
Sbjct: 304 V-LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK-MDEARKMLSEMS 361

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G++P+V T N L++   +   I+ A +    M    C PN+RT+  +I GL    +V 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++++L +M +  +   L  Y  +I   C+ N LE A RL  +M    L+PD+ TY   I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCG 370
           + LC+  R+++A  + + +   G+   + ++  ++ G C+VGK D + + LE    D C 
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
             +  +N L+E  C   K   A  ++ KM    +     ++ I I  + ++     A ++
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              MV     PD  TY+AF+         E+   V  +++ + ++ D ++Y+ L++G  +
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK------------------A 531
           +     A +   CM   GC  S    +ILI  L    ++ +                  A
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIA 721

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           ++L       G +   S Y  ++ G  + +R ++   ++  M   G +   + Y  L+  
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             +     +     + MV+ GL+P  E+   L+ GL          +  + L+S     D
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              + +LI+GL K  L  + S L+D+M  KG  P+  T+ LL+
Sbjct: 842 EVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 216/482 (44%), Gaps = 43/482 (8%)

Query: 222 LDQFRRMHKKG---CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           L+ FR+M+  G     P  R +  ++  L     +D+  ++  E+ +  I   +  +  +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 279 IPMLCR-ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +   C+  N +E  +   K+++A  L PD  TY  LI   C N  +D+A ++   M   G
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQA-GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAK 393
               +  + +++ GLCE G+ +E++       ED C      +  L+     +G      
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG------ 313

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
                   RK+                    +A  L   M      P+  TY+  + G C
Sbjct: 314 --------RKV--------------------EALNLFNEMKEKGCEPNVHTYTVLIDGLC 345

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    ++A ++  ++S + L+   ++Y+ L++G C+   I +A E+   M  N C  ++ 
Sbjct: 346 KENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTR 405

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI GLC  RKV KA+ L +       S +  TY  ++ G  K+   +    +L+ M
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              G   D   Y + I ++ ++ ++++    F+ +   G+  +     +L+ G     ++
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
            +  S + ++++D+ + +S  YN+LI GL KE    +AS L+  ML  G  P   T+ +L
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585

Query: 694 VG 695
           +G
Sbjct: 586 IG 587



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 138/634 (21%), Positives = 259/634 (40%), Gaps = 72/634 (11%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           R+ +S  +LI  L     ++ ALK+F  ++ +     T  TY  +I  L  +G   E   
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMT-EDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 118 LCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
           L   M KE+   PNV    + L+       +++ A ++L  M+  G   SV  +N ++  
Sbjct: 321 LFNEM-KEKGCEPNVHTYTV-LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 176 IVEE----------------------------------KRGFADFVFVYKEMVKAGIVPN 201
             +E                                  KR     + +  +M++  + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           + T N L+    + N +ESA      M++ G  P+  T+ + I  L    RV+++ ++  
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            +   G++     YT +I   C+  K++ A  L + M     +P+  TY  LI  LC+  
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE---------SVNFLEDKCGYV 372
           ++ +A+ ++  M+ +G+ PT   +  ++  + + G FD          S+ +  D C Y 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
                A L    + G       ++ KM +  I  D  ++ + I          +A++ L 
Sbjct: 619 -----AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 432 RMVVSSVVPDCATYSAFV---------------LGKCKLCN---YEDALRVFRQVSAQSL 473
            MV +   P     S  +               +G   + N   YE AL++F ++     
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGC 733

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
            +D   Y  L+ G CQ E++ EA  +   M + G S S   +N L+   C +    +A+R
Sbjct: 734 TIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVR 793

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L      +G      +Y  ++ GL      +    V   +L  G   D  A+ +LI  + 
Sbjct: 794 LVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLL 853

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           +++ + +C+   ++M + G  P+  T   L+ GL
Sbjct: 854 KRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 256/535 (47%), Gaps = 15/535 (2%)

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           FV + +VK   + ++ T N  +  L   +RI  A   F  M K G  PN  T+  ++ GL
Sbjct: 38  FVEQLLVKG--LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGL 95

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R+ D+ ++   M   G   ++  Y  ++   C+  KL+EA+++F        +PD 
Sbjct: 96  CNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDV 155

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  LIN  C+  +LD+A  IL+ M+   L P    +  +V GLC+ G+ DE+   + D
Sbjct: 156 VTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD 215

Query: 368 KCGYVTSP----HNALLECCCNA-GKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENE 421
           K G+  SP    ++ L+   C    +   A+ +LEKM  +    D  S+N  I  L   +
Sbjct: 216 K-GF--SPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQ 272

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + +A +L G ++     P+  TY+  + G  K     +A  +F  +    L  D+I+Y+
Sbjct: 273 GVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYT 332

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             ++GLC+  ++ +A+ +   M + GC     S N +I GLC  ++VD+A  L S   + 
Sbjct: 333 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 392

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM---SEQNKL 598
           G S    ++  ++ G  +  + K  +    +ML  G    V  Y IL+  +    ++ ++
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           K+    F+ M++ G VPD  T  +L+ GL    +L      +  + +   + +   YN L
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 512

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA-FDSS 712
           I+GL       +A  L   M+ KG VPD  T+G ++ +   +E+  +  A FD S
Sbjct: 513 ISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 256/548 (46%), Gaps = 22/548 (4%)

Query: 39  TDMIKSHQTTDYEAKIQSLR-HNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRF 92
           + + ++ +  D +     +R H   P+      L+  L N   +S A  +++ + I+  +
Sbjct: 58  SGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM-IKAGY 116

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAM 151
                TY  ++      G ++E   +    VK  + P+V     +L+  F    +++ A 
Sbjct: 117 SPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDV-VTYNALINGFCKADKLDEAQ 175

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           R+L  M S      V  +N ++  +   K G  D   +   +V  G  PNV T + L+  
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLC--KNGRVDEARML--IVDKGFSPNVITYSTLISG 231

Query: 212 L-FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
           L  E  R+ESA     +M   GC P+  ++  +I GL     V +++ + G +   G + 
Sbjct: 232 LCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEP 291

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           E+  Y  +I  L +E+++ EA  LF  +    L PD +TY   I+ LC+  R++DA  +L
Sbjct: 292 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 351

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNA 386
           +DM   G  P       ++ GLC+  + DE+   L        SP+    N L+   C A
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE---IRKAYELLGRMVVSSVVPDC 442
           GK+  A    ++M  R +     ++NI +  LC+  +   I++A  L   M+    VPD 
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 471

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TYSA + G  K    +DA R+   + A+  + +  +Y+ L+ GLC ++K+ EA+E+F  
Sbjct: 472 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVA 531

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M + GC   + ++  +I  LC    VDKA+ L   +  +G   T+  Y  ++ GL  + R
Sbjct: 532 MVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVAR 591

Query: 563 AKDLLVVL 570
             + L +L
Sbjct: 592 VDEALKLL 599



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 236/510 (46%), Gaps = 14/510 (2%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           +PN R    +L+    N  R++ A  +   M   G+   V  +N +L    +  +   + 
Sbjct: 82  WPN-RITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGK-LDEA 139

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++   VK G VP+V T N L+    + ++++ A    +RM  +   P+  T+  ++ G
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE-NKLEEAIRLFKMMRALDLMP 305
           L  N RVD++  ++    D G    +  Y+ +I  LCRE  +LE A +L + M      P
Sbjct: 200 LCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D ++Y  LI+ L     + +A  +   ++  G  P    +  ++ GL +  + +E+    
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELF 316

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN 420
                +   P    +   ++  C AG+   A  +L+ M ++  + D  S N  I  LC+ 
Sbjct: 317 SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKE 376

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + + +A  LL  M      P+  +++  + G+C+   ++ A+  F+++  + +    ++Y
Sbjct: 377 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTY 436

Query: 481 SKLVEGLC---QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           + LV+GLC   Q  +I EA+ +F  M + G      +++ LI GL    K+D A RL   
Sbjct: 437 NILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA 496

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             + G      TY  ++ GL  L +  + L +   M+ +GC  D   Y  +I ++ +Q  
Sbjct: 497 MEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEM 556

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           +      F+  ++AG+VP      SL+ GL
Sbjct: 557 VDKALALFDGSLEAGVVPTSGMYFSLIDGL 586



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 155/365 (42%), Gaps = 37/365 (10%)

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
           DK   + SP       LL     +GK   A   +E++  + + D  ++NI I  LC    
Sbjct: 6   DKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASR 65

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I  A  +   M      P+  TY+A + G C      DA  ++ ++       D ++Y+ 
Sbjct: 66  IGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNT 125

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-------- 534
           L+ G C+V K+ EA+++F    K G      ++N LI G C   K+D+A R+        
Sbjct: 126 LLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185

Query: 535 ------------------------RSLAYSSGTSYTTSTYTKIMLGLVK-LQRAKDLLVV 569
                                   R L    G S    TY+ ++ GL + L+R +    +
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQL 245

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           L +M++ GC  D+ +Y  LI  ++ +  + +    F  +++ G  P+  T   L+ GL  
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             +++      + LV      D+  Y + I+GL K G    A  +L  M  KG VPD  +
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365

Query: 690 HGLLV 694
           H  ++
Sbjct: 366 HNAVI 370



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 174/390 (44%), Gaps = 14/390 (3%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNH 144
           + K F     TY  +I   GL   +  +E   Q + K      +  ++S   L+      
Sbjct: 214 VDKGFSPNVITYSTLIS--GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLARE 271

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
             V+ A+++  ++   G++  V  +N+++  +++E R    F   +  +VK G+ P+  T
Sbjct: 272 QGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL-FSGLVKHGLEPDAIT 330

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
               ++ L +  R+E AL   + M +KGC P+  +   VI GL    RVD++  +L  M 
Sbjct: 331 YTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 390

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC---ENL 321
             G       +  +I   CR  K ++A+  FK M    + P  +TY  L++ LC   +  
Sbjct: 391 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 450

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHN 377
           R+ +A  + + MI  G  P    +  ++ GL + GK D++   L       C      +N
Sbjct: 451 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYN 510

Query: 378 ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           +L+   C   K   A  +   M ++  + D  ++   I  LC+ E + KA  L    + +
Sbjct: 511 SLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEA 570

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
            VVP    Y + + G C +   ++AL++ +
Sbjct: 571 GVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 161/323 (49%), Gaps = 17/323 (5%)

Query: 50  YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           YE ++ +  +N+  D L++     + ++ A ++F  + ++   +  A TY   I  L  A
Sbjct: 289 YEPEVPT--YNILIDGLLK----EDRVNEAFELFSGL-VKHGLEPDAITYTVFIDGLCKA 341

Query: 110 GNVEEMEGLCQNMVKER-YPNV--REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G VE+   + ++M ++   P+V    A+I+         RV+ A  +L  M + G   + 
Sbjct: 342 GRVEDALLMLKDMDEKGCVPDVVSHNAVIN---GLCKEKRVDEAEVLLSGMEAKGCSPNA 398

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL---FETNRIESALD 223
             FN ++       + +   +  +KEM+K G+ P V T N L++ L    +  RI+ A+ 
Sbjct: 399 ISFNTLICGQCRAGK-WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 457

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F  M +KG  P+  T+  +I GL    ++DD+  +LG M   G    +  Y  +I  LC
Sbjct: 458 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 517

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
             +K++EA+ LF  M     +PD +TY  +I+ LC+   +D A  + +  +  G+ PT  
Sbjct: 518 GLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSG 577

Query: 344 VFVDIVRGLCEVGKFDESVNFLE 366
           ++  ++ GLC V + DE++  L+
Sbjct: 578 MYFSLIDGLCAVARVDEALKLLQ 600


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 177/716 (24%), Positives = 306/716 (42%), Gaps = 67/716 (9%)

Query: 2   AIKLSSLTISNKIIKWVNLTSCISS--LSCANTIPLSSETD--MIKSHQTTDYEAKIQSL 57
           A+ L+S +          +T+C S+  L  A   P         +K    ++ E  + +L
Sbjct: 4   AMHLASSSYPRAASPLPQVTACPSNAGLPAAARGPWWQRRARFQLKFAAGSEQERLVTAL 63

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           R    P+  +R+L+      SAL     ++  +      D Y ++I KLG AG  + M+ 
Sbjct: 64  REQADPEAALRMLN------SALARDDGLTPSR------DVYEEIIRKLGTAGAFDLMKV 111

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYR---------------------------VNGA 150
           L   M +E +    E  + LV SF+  Y                             N  
Sbjct: 112 LVGEMRREGH----EVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHL 167

Query: 151 MRVL-------------VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           + VL               M+S G +  V  FN V+ A+   ++     V + +EM    
Sbjct: 168 LTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA-VLMLEEMSSCD 226

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P+  T   L+E   E   IE+AL    RM + GC P S T  ++I G     RV D++
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
             + +    G + +   ++  +  LC+   ++ A+++  +M      PD  TY  +INCL
Sbjct: 287 GYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCL 346

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH- 376
           C N  L++A  I+  M+  G  P    F  ++  LC   + +E+++   +      SP+ 
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406

Query: 377 ---NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGR 432
              N L+   C  G   LA  + E+M       D  ++NI I  LC + ++ KA +LL  
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKE 466

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M VS       TY+  + G CK    E+A  VF Q+    +  ++I+++ L++GLC  E+
Sbjct: 467 MEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I +A E+   M   G   ++ ++N ++   C    + KA  +     ++G      TY  
Sbjct: 527 IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYAT 586

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL K +R +  L +L  M ++G     +AY  +IQS+   N  +D    F  M + G
Sbjct: 587 LINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646

Query: 613 LVPDRETMLSLLHGL-ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
             PD  T   +  GL   G  +      + ++  +  + + S + +L  GL   G+
Sbjct: 647 GPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGM 702


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 156/598 (26%), Positives = 270/598 (45%), Gaps = 19/598 (3%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+  A      M   G   +   +NV++    +  +    ++ + KEM ++G+ PNV T 
Sbjct: 22  RLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL-KEMKESGLAPNVVTY 80

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++       ++++A   FR+M + GC PN  T+  ++ GL  N  +D++  +L EM +
Sbjct: 81  STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 140

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G+Q +   Y  ++  LC+  K++ A+++F+     D  PD + Y  LI  LC+  RLD+
Sbjct: 141 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDE 200

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLE 381
           A  + E M      P    F  ++ GLC+  +  E+   LE      C      +++L++
Sbjct: 201 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 260

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G+   A+ + ++M  R I  +  ++N  I   C    +  A  L+  M  +  +P
Sbjct: 261 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 320

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  TY+  + G CK     +A R+F  + A+    D I+YS L+ G C++E+I  A  +F
Sbjct: 321 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 380

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M K        +F+ L+ G C    VD A RL     +S  S    TYT ++ G  K+
Sbjct: 381 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 440

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            R  +   VL +M   GC  +V  Y  LI +     K          MV  G+ P+  T 
Sbjct: 441 GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITY 500

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLML 679
            SL+ G      L      + +L  D     D   Y ++++GL + G  S A  LL+ + 
Sbjct: 501 RSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIK 560

Query: 680 GKGWVPD-----ATTHGLLVGSSVGEEID-------SRRFAFDSSSFPDSVSDILAEG 725
             G  P      A   GL  G  +G+ ++       SR+   ++ ++   + ++  EG
Sbjct: 561 QSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREG 618



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 241/528 (45%), Gaps = 42/528 (7%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           NV T   +++ L + NR+  A   F +M KKG  PN  T+ ++I G     +V  +  +L
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM + G+   +  Y+ +I   CR+ K++ A +LF+ M     MP+ +TY  L++ LC N
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
             +D+A ++L++M   GL P    +  ++ GLC+ GK D ++   ED       P     
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP----- 180

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                                    D  +++  I  LC+   + +A +L  +M  +S  P
Sbjct: 181 -------------------------DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEP 215

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  T++A + G CK    ++A +V   +  ++   + I+YS L++GLC+  ++ +A EVF
Sbjct: 216 DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF 275

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M   G   +  ++N LI+G C+   VD A+ L     ++G      TY  ++ GL K 
Sbjct: 276 KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKT 335

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            RA +   +   M  + C  DV  Y  LI    +  ++      F+ M+K  ++PD  T 
Sbjct: 336 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 395

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +L+ G  +   +      + ++V+     D   Y  L++G  K G   +A  +L  M  
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455

Query: 681 KGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGN 728
           +G  P+  T+  L+             AF  +  P     +L E +GN
Sbjct: 456 RGCQPNVVTYTALID------------AFCRAGKPTVAYKLLEEMVGN 491



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/563 (23%), Positives = 260/563 (46%), Gaps = 15/563 (2%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +++  F    +V+ A ++   M   G   ++  +N +L  +   + G  D  
Sbjct: 75  PNVV-TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC--RNGLMDEA 131

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + +  EM + G+ P+  + + L+  L +T +I+ AL  F       C P+   +  +I G
Sbjct: 132 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 191

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+D++  +  +M +   + ++  +T ++  LC+ ++L+EA ++ + M   +  P+
Sbjct: 192 LCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  LI+ LC+  ++ DA ++ + MIV G+ P    +  ++ G C     D ++  +E
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           +       P    +N L++  C  G+   A  +   M  +    D  +++  I   C+ E
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 371

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            I  A  L   M+  +V+PD  T+S  V G C     +DA R+  ++ A     D  +Y+
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            LV+G C+V ++ EA  V   M+K GC  +  ++  LI   C   K   A +L      +
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491

Query: 542 GTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
           G      TY  ++ G      L+ A+ +L  L +   E C  D+ AY +++  +    ++
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLER--DENCKADMFAYRVMMDGLCRTGRM 549

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL-VSDSEVLDSSMYNI 657
                    + ++G  P  +  ++L+ GL  G +L      + ++ +S     ++  Y  
Sbjct: 550 SAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEA 609

Query: 658 LINGLWKEGLTSQASYLLDLMLG 680
           +I  L +EG   +A+ L D +LG
Sbjct: 610 VIQELAREGRHEEANALADELLG 632


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 173/670 (25%), Positives = 300/670 (44%), Gaps = 36/670 (5%)

Query: 30  ANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQ 89
           +  + LS++   I S         ++ L  +L+P H+  +     D  +AL  F W++++
Sbjct: 35  SEPVDLSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALR 94

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL-ISLVFSFVNHYRVN 148
             F+H   +Y  M+       N+         +++ R   V E + IS++ S  +   V 
Sbjct: 95  PGFKHNVHSYSSML-------NI---------LIRARLLGVAEKIRISMIKSCCSIEDVL 138

Query: 149 GAMRVLVNMNSGG---FKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVP 200
             + V   MN+ G   FK ++  +N +L ++     ++E +       VY E++   I P
Sbjct: 139 FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKT------VYLELLNNQISP 192

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N+ T N ++    +   +  A     ++ + G  P++ T+  +I G   N  VD++  + 
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
             M   G Q     YT +I  LC   ++ EA++LF  M   +  P   TY  LI  L  +
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PH 376
            R  +A ++  +M   G  P    +  ++ GLC+  K DE+   L +  + G + S   +
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NAL++  C  G    A  IL+ M       +  ++N  I  LC+  ++ KA  LL +M+ 
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P   TY++ + G+CK+ + E A R+   ++   LV D  +YS  ++ LC+  ++ E
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  +F  +   G   +   +  LI G C + K+D A  L     +      + TY  ++ 
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL K ++ K+   ++A+ML  G    V  Y ILI  M +          FN MV  G  P
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  + LH       L  V   I K+  +  + D   Y +LI+G  + GLT +A   L
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672

Query: 676 DLMLGKGWVP 685
             M+  G  P
Sbjct: 673 KCMVDTGCKP 682



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 152/644 (23%), Positives = 284/644 (44%), Gaps = 53/644 (8%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRV 147
           QK  Q    +Y  +I  L  AG + E   L  +M ++   P VR   + L+++     R 
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV-LIYALSGSGRK 315

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
             A+ +   M   G + +V  + V++  + +E +   +   +  EM + G++P+V T N 
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK-MDEARKMLSEMSEKGLIPSVVTYNA 374

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++   +   I+ A +    M    C PN+RT+  +I GL    +V  ++++L +M +  
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +   L  Y  +I   C+ N LE A RL  +M    L+PD+ TY   I+ LC+  R+++A 
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECC 383
            + + +   G+   + ++  ++ G C+VGK D + + LE    D C   +  +N L+E  
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 384 CNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C   K   A  ++ KM    +     ++ I I  + ++     A ++   MV     PD 
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+AF+         E+   V  +++ + ++ D ++Y+ L++G  ++     A +   C
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   GC  S    +ILI      + +    R++      G    ++  +  +  + K   
Sbjct: 675 MVDTGCKPSLYIVSILI------KNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLE 728

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
            +  L +  +M+  GC +DV  Y  LI    +Q +L++     + M + G+ P  +   S
Sbjct: 729 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 788

Query: 623 LLH-----GL-ADGSQL--HLVSSGINKLVSDSEVL------------------------ 650
           LL      G+ A+  +L   +V +G+  L+   ++L                        
Sbjct: 789 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 848

Query: 651 ---DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
              D   + +LI+GL K  L  + S L+D+M  K    DAT   
Sbjct: 849 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK----DATAQA 888



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/586 (22%), Positives = 266/586 (45%), Gaps = 67/586 (11%)

Query: 125 ERYPNVREALISLVFSFVNH-YRVNGAMRVLVNMNS-----GGFKLSVDVFNVVLGAIVE 178
           +++P++R+ L SL  S V+  +  N   +  ++  +      GFK +V  ++ +L  ++ 
Sbjct: 54  QKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIR 113

Query: 179 EKR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG---CC 234
            +  G A+ + +   M+K+    +++ + ++LEV             FR+M+  G     
Sbjct: 114 ARLLGVAEKIRI--SMIKSCC--SIEDVLFVLEV-------------FRKMNADGEFKFK 156

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR-ENKLEEAIR 293
           P  R +  ++  L     +D+  ++  E+ +  I   +  +  ++   C+  N +E  + 
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
             K+++A  L PD  TY  LI   C N  +D+A ++   M   G    +  + +++ GLC
Sbjct: 217 ASKIVQA-GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 354 EVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS 409
           E G+ +E++       ED C      +  L+     +G+   A  +  +M ++       
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG------ 329

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
                   CE                    P+  TY+  + G CK    ++A ++  ++S
Sbjct: 330 --------CE--------------------PNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + L+   ++Y+ L++G C+   I +A E+   M  N C  ++ ++N LI GLC  RKV 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           KA+ L +       S +  TY  ++ G  K+   +    +L+ M   G   D   Y + I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            ++ ++ ++++    F+ +   G+  +     +L+ G     ++ +  S + ++++D+ +
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
            +S  YN+LI GL KE    +AS L+  ML  G  P   T+ +L+G
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 132/626 (21%), Positives = 250/626 (39%), Gaps = 83/626 (13%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           R+ +S  +LI  L     ++ ALK+F  ++ +     T  TY  +I  L  +G   E   
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMT-EDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 118 LCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
           L   M KE+   PNV    + L+       +++ A ++L  M+  G   SV  +N ++  
Sbjct: 321 LFNEM-KEKGCEPNVHTYTV-LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 176 IVEE----------------------------------KRGFADFVFVYKEMVKAGIVPN 201
             +E                                  KR     + +  +M++  + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           + T N L+    + N +ESA      M++ G  P+  T+ + I  L    RV+++ ++  
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            +   G++     YT +I   C+  K++ A  L + M     +P+  TY  LI  LC+  
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE---------SVNFLEDKCGYV 372
           ++ +A+ ++  M+ +G+ PT   +  ++  + + G FD          S+ +  D C Y 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
                A L    + G       ++ KM +  I  D  ++ + I          +A++ L 
Sbjct: 619 -----AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 432 RMVVSSVVPDCATYSAFV---------------LGKCKLCN--------------YEDAL 462
            MV +   P     S  +               +G   + N              YE AL
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIAL 733

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++F ++      +D   Y  L+ G CQ E++ EA  +   M + G S S   +N L+   
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 793

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C +    +A+RL      +G      +Y  ++ GL      +    V   +L  G   D 
Sbjct: 794 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 853

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVM 608
            A+ +LI  + +++ + +C+   ++M
Sbjct: 854 VAWKVLIDGLLKRDLVDECSELIDIM 879


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 167/683 (24%), Positives = 306/683 (44%), Gaps = 40/683 (5%)

Query: 80  LKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLV 138
           L  F W S  +    +AD + ++   L  A +  +  GL   M+    +P +  A I   
Sbjct: 100 LDFFYW-SRPRIAPPSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRA 158

Query: 139 FS--------------------FVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVLG 174
                                  V+ Y+ NG++R    V++ M   G   +    N +L 
Sbjct: 159 IQDSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLK 218

Query: 175 AIVEEKRGFADFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            ++  +    + V+  K  M  AGI P+V T +  LE   +    ++A   F  M ++ C
Sbjct: 219 DLL--RADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDC 276

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
             N  T+ ++I GL  +  V+++     EM D G+  +   Y  ++  LC+  +L+EA  
Sbjct: 277 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKA 336

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L   M    L P+ + Y  L++   +  +  +A DIL +MI  G+ P   ++ +++RGLC
Sbjct: 337 LLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLC 396

Query: 354 EVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCD 408
           ++G+   +   L +  K G+   T  ++ L++          A  +L +M +  I  +  
Sbjct: 397 KIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAY 456

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++ I I  LC+N E ++A  LL  M+   + P+   Y+  ++G  K  +   A      +
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           +  +++ D   Y+ L++GL  V +I EA E +  + K G      +++ LI+G C  R +
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +KA +L     +SG      TYT ++ G  K    + +  +L  ML  G   D   Y I+
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I+++S    ++   +    + K GLVPD     SL+ GL   + +      ++++  +  
Sbjct: 637 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEID 703
                 YN LI+G  + G  S+A  + D +L KG +P+  T+  L+        + +  D
Sbjct: 697 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFD 756

Query: 704 SRRFAFDSSSFPDS-VSDILAEG 725
             +   D    PD+ V ++LA G
Sbjct: 757 LYKDMLDRGIAPDAFVYNVLATG 779



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 239/595 (40%), Gaps = 68/595 (11%)

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNV 202
           + A +V   M      ++   +NV++  +     VEE  GF +      EMV  G+ P+ 
Sbjct: 262 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE------EMVDYGLSPDA 315

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T   L+  L +  R++ A      M   G  PN   +  ++ G +   +  ++  IL E
Sbjct: 316 FTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNE 375

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G+Q     Y  +I  LC+  +L  A +L   M  +   PD  TY  L+    ++  
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
            D A ++L +M   G+ P    +  ++ GLC+ G+  E+ N LE+       P    +  
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+      G   LA   LE M    +  D   +N  I+ L     I +A E   ++    
Sbjct: 496 LIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRG 555

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG----------- 486
           +VPD  TYS  + G CK  N E A ++ +Q+    L  ++ +Y+ L+EG           
Sbjct: 556 LVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVS 615

Query: 487 ------------------------LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
                                   L + E +  A  V   + KNG       ++ LI GL
Sbjct: 616 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 675

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLL-VVLAQMLVEGC 578
           C M  ++KA+ L       G       Y  ++ G  +   + RA+++   +LA+ L+  C
Sbjct: 676 CKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNC 735

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH---- 634
                 Y  LI    +   + D    +  M+  G+ PD      L  G +D + L     
Sbjct: 736 V----TYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALF 791

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           L     N+  +       S+++ L+ G  K G   +   LL +M+ +  VP+A T
Sbjct: 792 LTEEMFNRGYA-----HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQT 841



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 10/288 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M+ +G+ PN DT   LLE  F++N  E      + M   G  P++  + IVI+ L  +
Sbjct: 584 QQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 643

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             ++ +  +L E+   G+  +L  Y+ +I  LC+   +E+A+ L   M    L P  + Y
Sbjct: 644 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCY 703

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+  C +  +  A ++ + ++  GL P    +  ++ G C+ G   ++ +  +D   
Sbjct: 704 NALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLD 763

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
              +P    +N L   C +A     A  + E+M +R  A    ++  +R  C+   +++ 
Sbjct: 764 RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQET 823

Query: 427 YELLGRMVVSSVVPDCATYSAFV--LGKC-KLCNYEDALRVFRQVSAQ 471
            +LL  M+   +VP+  T    +   GK  KLC   +A RVF ++  +
Sbjct: 824 EKLLHVMMDREIVPNAQTVENVITEFGKAGKLC---EAHRVFAELQQK 868


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 182/714 (25%), Positives = 311/714 (43%), Gaps = 47/714 (6%)

Query: 30  ANTIP---LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWV 86
           +NT P   L S+  +I S  T +  +++  L   L P H++ +LD  N+  S L+ F WV
Sbjct: 42  SNTDPFPELVSKISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWV 101

Query: 87  SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY----PNVREALISLVFSFV 142
           S    F+H    +  M+ +L                V++R      NVR   I ++ S  
Sbjct: 102 SRTHFFKHDMSCFVSMLNRL----------------VRDRLFVPADNVR---ILMIKSCR 142

Query: 143 NHYRVNGAMRVLVNMNSG---GFKL-SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
           N   V   ++VL  +N+    G+ L S     + LG    +  G      VY EM+ +GI
Sbjct: 143 NEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRD----VYIEMLNSGI 198

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PN+ T N ++++L    +++ A      +   G CP++ T+  +I G   N  +D +  
Sbjct: 199 RPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFE 258

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +   M   G       Y+ +I  LC E +LEEA+ + + M    + P    Y   I  LC
Sbjct: 259 MFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLC 318

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLEDKCGYVTS 374
           +  R  +A  +L  M   G  P    +  ++ GL   GKF+ ++      L D       
Sbjct: 319 DAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAV 378

Query: 375 PHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
            ++AL+      G+F  A  I E M +   + + +++N+ I+  C    I+KA  +  +M
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           + +   P+  TY+  +    K     +A+R+   +    L LD+ +Y+ L+ G  +  K+
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A  +F  M ++G S +  ++N +I G   + KVD A+ L      SG   ++ TY  +
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G  K  R  +      +M+ +G   +V  Y   I  + +  +       F+ M K   
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+  T  SL+ GL    Q    +    +L+ D    +   Y  L+ GL  +G   +A  
Sbjct: 619 FPNLCTYSSLIDGLCQEGQ----AEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQ 674

Query: 674 LLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDS---SSFPDSVSDILA 723
           L++ M  KG  P    +  LLVG     E++S    FDS   + F   +SD  A
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKA 728



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 221/506 (43%), Gaps = 12/506 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L   G +EE   + + M+ K   P V    I +V S  +  R   A+++L  
Sbjct: 274 TYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIV-SLCDAGRSCEAVKLLGK 332

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +V  +  ++  +  + + F   + VY +M+  G+VP   T + L+  L+   
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGK-FEVAIGVYHKMLADGLVPTAVTYSALINQLYVEG 391

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R E+AL  F  M      PN+ T+ ++IKG  +   +  + +I  +M   G    +  Y 
Sbjct: 392 RFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYN 451

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            II +  ++  +  A+RL +MM+   L  D  TY  LI+      +L+ A  +  +M+  
Sbjct: 452 IIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH 511

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFLA 392
           G++P    +  I+ G   V K D+++       + G V S   +N ++       +   A
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           +    KM  + +  +  ++   I  LC+N     A+++   M      P+  TYS+ + G
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+    EDA R+       ++     +Y+ LV GLC   +  EA ++   M K G   S
Sbjct: 632 LCQEGQAEDAERLLDDGCEPNVD----TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPS 687

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              +  L+ G C   +V+ A+++     ++G     S Y  ++  L K    +    +  
Sbjct: 688 EEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQ 747

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNK 597
            ML +    D   + +L+  + ++ +
Sbjct: 748 TMLKKHWNSDEVVWTVLLDGLLKEGE 773



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 13/283 (4%)

Query: 57  LRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           + H +SP+      +I        +  AL +F W  ++     ++ TY  MI        
Sbjct: 509 VEHGISPNVVTYNAIINGYLTVAKVDDALALF-WKMVESGNVPSSGTYNMMISGFSKTNR 567

Query: 112 VEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           + E E  C  MVK+   PNV     S +     + R + A ++   M    +  ++  ++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVI-TYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYS 626

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            ++  + +E  G A+     + ++  G  PNVDT   L+  L    R   A      M K
Sbjct: 627 SLIDGLCQE--GQAEDA---ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKK 681

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           KG  P+   +  ++ G   N  V+ ++ I   M   G Q  LS Y  +I  LC+ N  ++
Sbjct: 682 KGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQK 741

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           A  +F+ M       DE+ +  L++ L +    D + ++L  M
Sbjct: 742 AQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVM 784



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 118/301 (39%), Gaps = 34/301 (11%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I      G +E    L   MV+    PNV     +++  ++   +V+ A+ +   
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV-TYNAIINGYLTVAKVDDALALFWK 542

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   S   +N+++    +  R      F  K MVK G++PNV T    ++ L +  
Sbjct: 543 MVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK-MVKQGLLPNVITYTSFIDGLCKNG 601

Query: 217 RIESALDQFRRMHKK-------------------------------GCCPNSRTFEIVIK 245
           R   A   F  M K+                               GC PN  T+  +++
Sbjct: 602 RTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVR 661

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           GL    R  ++  ++  M   G+Q     Y  ++   C+  ++E A+++F  M      P
Sbjct: 662 GLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQP 721

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
               Y+ LI  LC+      A  + + M+       + V+  ++ GL + G+ D S+  L
Sbjct: 722 CLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781

Query: 366 E 366
            
Sbjct: 782 H 782


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 145/565 (25%), Positives = 264/565 (46%), Gaps = 15/565 (2%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +N ++  + +  R   D + + +EMV  G  PNV + N +L    + NR+E+AL    +
Sbjct: 46  TYNTMINGLSKSDR-LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 104

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +GC P+  ++  VI GL    +VD++  ++ +M   G Q  +  Y  ++   CR   
Sbjct: 105 MVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 164

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD-VFV 346
           L+ A+ L + M      P+ +TY  +++ LC   +LD A  + ++M   G  P D   + 
Sbjct: 165 LDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            IV  L + GK D++   +E       SP    +++LL   C AGK   A  +L++M   
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284

Query: 403 KIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
             + +  ++N  I   C+   I +AY LL  MV     P+  TY+  +   CK    EDA
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           + +   +  +  V +  +Y+ L++  C+ +++  A ++   M + GC  +  S+N +I G
Sbjct: 345 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 404

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE-GCAL 580
           LC   KV + + L     S+       T+  I+  + K  R  D+   L  ++ E GC  
Sbjct: 405 LCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV-DIAYELFNLIQESGCTP 463

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMV-KAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           ++  Y  L+  + +  +          M  K G  PD  T  +++ GL    ++      
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG---- 695
             +++SD    D   Y+I+I+ L K     +A+ +L+LML  G+ P A T+G L+     
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583

Query: 696 -SSVGEEIDSRRFAFDSSSFPDSVS 719
             ++ + ++  +      S+PD V+
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVT 608



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 169/678 (24%), Positives = 302/678 (44%), Gaps = 28/678 (4%)

Query: 50  YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           Y   I  L  +   D  IR+L+   D   A  +F + ++   F       CK       A
Sbjct: 47  YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGF-------CK-------A 92

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
             VE    L + MV    P    +  +++       +V+ A RV+  M   G + +V  +
Sbjct: 93  NRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 152

Query: 170 NVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
             ++     V +  G  + V   ++M + G  PN  T N ++  L    +++SAL  F+ 
Sbjct: 153 GTLVDGFCRVGDLDGAVELV---RKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKE 209

Query: 228 MHKKGCCP-NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           M + G CP +  T+  ++  L+ + +VDD+  ++  M   G    +  Y+ ++  LC+  
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG 269

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           KL+EA  L + M      P+ +TY  +I+  C+  R+D+A  +LE+M+  G  P    + 
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 329

Query: 347 DIVRGLCEVGKFDESVNFLE---DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMAD 401
            ++   C+ GK ++++  +E   +K GYV +   +N+LL+  C   +   A  +L  M  
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEK-GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 388

Query: 402 RK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           +  + +  S+N  I  LC+  ++ +   LL +M+ ++ VPD  T++  +   CK    + 
Sbjct: 389 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS-KNGCSLSSSSFNILI 519
           A  +F  +       + ++Y+ LV GLC+  +  +A  +   M+ K GCS    ++N +I
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GLC  ++VD+A +L     S G +    TY+ ++  L K +   +   VL  ML  G  
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
                Y  LI    +   L        +++  G  PD  T    +  L+   +L      
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           +  ++    V D+  YN L+ G      T  A  L ++M   G  PD  T+  LVG  V 
Sbjct: 629 LETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVD 688

Query: 700 EEIDSRRFAFDSSSFPDS 717
           ++      A  S S  D+
Sbjct: 689 KKSYKDLLAEVSKSMVDT 706



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 233/509 (45%), Gaps = 8/509 (1%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+  +      +L  L +  +   A+  FR M K  C P+S T+  +I GL  + R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD++ +L EM D G    +  Y  ++   C+ N++E A+ L + M      PD ++Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +IN LC+  ++D+A  +++ MI  G  P    +  +V G C VG  D +V  +       
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKA 426
             P    +N ++   C+  K   A  + ++M +      D  +++  +  L ++ ++  A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             L+  MV     P+  TYS+ + G CK    ++A  + ++++      + ++Y+ +++G
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++ +I EA  +   M   GC  +  ++ +L+   C   K + AI L  +    G    
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++    K    +    +L+ M+ +GC  +V +Y  +I  + +  K+ +  L   
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M+    VPD  T  +++  +    ++ +     N +       +   YN L++GL K  
Sbjct: 420 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 479

Query: 667 LTSQASYLLDLMLGK-GWVPDATTHGLLV 694
              QA YLL  M  K G  PD  T+  ++
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVI 508


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 294/636 (46%), Gaps = 21/636 (3%)

Query: 60  NLSPDHL---IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTY--CKMILKLGLAGNVEE 114
           N++P+     +R L    DL+ A ++ +  +   R     D Y   K+I  L   G   +
Sbjct: 36  NVAPNPASARLRRLIAREDLAGAARLVELSA--SRDGEAPDVYLCTKLIRNLCRRGRTSD 93

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
              + +       P    A  +LV  +  +  ++ A R++     G   ++ D +     
Sbjct: 94  AARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLI-----GSMPVAPDAYTYTPL 148

Query: 175 AIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
             V   RG  AD + +  +M++ G  PNV T   LLE + + +  E A+     M  KGC
Sbjct: 149 IRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGC 208

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN  T+ ++I G+    RVDD+  +L  +F  G Q +   YT ++  LC   + ++   
Sbjct: 209 TPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEE 268

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LF  M   + MP+E+T++ LI   C    ++ A  +L+ M          +   ++  +C
Sbjct: 269 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSIC 328

Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
           + G+ D++  FL +   Y  +P    +  +L+  C A ++  AK +L++M        + 
Sbjct: 329 KQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEV 388

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC+   I +A  L+ +M          TY+A V G C   + + AL +FR +
Sbjct: 389 TFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 448

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    ++I+Y+ L+ GLC  E++  A E+   M    C  +  +FN+L+   C    +
Sbjct: 449 PCKP---NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFL 505

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D+AI L       G +    TY  +  G+ K   ++D L +L  ++ +G + DV  +  +
Sbjct: 506 DEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSI 565

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  +S+++++++    F++    G+ P       +L GL    ++      +  +VS+  
Sbjct: 566 IGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGC 625

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           + + S Y ILI GL +EGL  +A  LL ++  +G V
Sbjct: 626 MPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 233/519 (44%), Gaps = 17/519 (3%)

Query: 222 LDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           LD  RR+       P++ T+  +I+ L    RV D++S+L +M   G Q  +  YT ++ 
Sbjct: 126 LDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 185

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            +C+ +  E+A+ +   MRA    P+ +TY  +IN +C   R+DDA D+L  +   G  P
Sbjct: 186 AMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQP 245

Query: 341 TDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
               +  +++GLC   ++D+        +E  C       + L+   C  G    A  +L
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 305

Query: 397 EKMADRKIADCDSW-NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M + + A   +  NI I  +C+   +  A++ L  M      PD  +Y+  + G C+ 
Sbjct: 306 QQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRA 365

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             + DA  + +++   +   + ++++  +  LCQ   I +A+ +   M ++GC++   ++
Sbjct: 366 ERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTY 425

Query: 516 NILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           N L+ G CV   +D A+ L RS+         T TYT ++ GL   +R      ++A+ML
Sbjct: 426 NALVNGFCVQGHIDSALELFRSMPCKP----NTITYTTLLTGLCNAERLDAAAELVAEML 481

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
              C  +V  + +L+    ++  L +       M++ G  P+  T  +L  G+       
Sbjct: 482 HRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSE 541

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH---- 690
                ++ LVS     D   ++ +I  L KE    +A  +  L    G  P A  +    
Sbjct: 542 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKIL 601

Query: 691 -GLLVGSSVGEEIDSRRFAFDSSSFP-DSVSDILAEGLG 727
            GL     +   ID   +   +   P +S   IL EGL 
Sbjct: 602 LGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLA 640



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 160/374 (42%), Gaps = 9/374 (2%)

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-----HNALLECCCNAGKFFL 391
           G  P   +   ++R LC  G+  ++   L    G   SP     +N L+   C  G    
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGS-GSPVDVFAYNTLVAGYCRYGHLDA 128

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           A+ ++  M      D  ++   IR LC+   +  A  LL  M+     P+  TY+  +  
Sbjct: 129 ARRLIGSMP--VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK   +E A+ V  ++ A+    + ++Y+ ++ G+C+  ++ +A ++   +   GC   
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           + S+  L+ GLC  ++ D    L +            T+  ++    +    +  + VL 
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           QM    CA +     I+I S+ +Q ++ D   F N M   G  PD  +  ++L GL    
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           + +     + ++V ++   +   +N  I  L ++GL  QA  L++ M   G      T+ 
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 692 LLV-GSSVGEEIDS 704
            LV G  V   IDS
Sbjct: 427 ALVNGFCVQGHIDS 440



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 8/286 (2%)

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD    +  +   C+     DA RV R        +D  +Y+ LV G C+   +  A  
Sbjct: 72  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 131

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M     +  + ++  LI  LC   +V  A+ L       G      TYT ++  + 
Sbjct: 132 LIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 188

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K    +  + VL +M  +GC  ++  Y ++I  M  + ++ D     N +   G  PD  
Sbjct: 189 KNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTV 248

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           +  +LL GL    +   V     +++  + + +   +++LI    + G+  +A  +L  M
Sbjct: 249 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM 308

Query: 679 LGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSSF---PDSVS 719
                  + T   +++ S    G   D+ +F  +  S+   PD++S
Sbjct: 309 TEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTIS 354


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 156/655 (23%), Positives = 294/655 (44%), Gaps = 30/655 (4%)

Query: 40  DMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTY 99
           D+I +        ++  L   L P H+ ++++   +  +AL+ F W+S +  ++H    +
Sbjct: 48  DLISTDPHWPKNPELNRLASTLRPHHVSKIINTHINTDTALQFFYWISKRHFYKHDMGCF 107

Query: 100 CKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS 159
             M+ +L             ++ +     +VR  +I    +     RV   +  + + +S
Sbjct: 108 VSMLNRL------------VKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDS 155

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVF----VYKEMVKAGIVPNVDTLNYLLEVLFET 215
           G F  ++  FN +L  +     G  D V     VY ++  +G+ P++ T N ++ +L + 
Sbjct: 156 GLFGFTLYSFNTLLLQL-----GKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKK 210

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +++ A+  F ++ +   CP++ T+  +I G   N ++D +  +   M   G       Y
Sbjct: 211 GKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTY 270

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           + +I  LC E ++ EA+ + + M    + P   TY   I+ LC+  R+DDA +++  M  
Sbjct: 271 STLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGK 330

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFL 391
            G +P+   +  I+ GL   GK + ++       K G V  T  +NAL+   C  G+F +
Sbjct: 331 KGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGI 390

Query: 392 AKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  I + M     +A+  ++N  I+ L   ++I KA  +  +M+     P   TY+  ++
Sbjct: 391 ALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIV 450

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
              K     +A R    +   +   D  +Y +L+ G C+  K+  A   F  M K G S 
Sbjct: 451 ENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISP 510

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++  +I G C   K+D A+ L      +G S +  TY  I+ GL K  R  +     
Sbjct: 511 NQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFC 570

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           A+M  +G   +   Y  LI  + +          F+ M K   +P+  T  SL++GL   
Sbjct: 571 AKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQE 630

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            ++        +L  +        Y+ L++GL +EG +++AS L++ M  KG  P
Sbjct: 631 GKV----DAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSP 681



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 261/584 (44%), Gaps = 21/584 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+     + +++ A  V   M   G   +   ++ ++  +  E R   + + + +EM +
Sbjct: 237 SLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR-IGEAMDMLEEMTE 295

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            GI P V T    +  L +  R++ A++  R M KKGC P+ +T+  +I GL    +++ 
Sbjct: 296 KGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMEL 355

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +  +M   G+      Y  +I  LC E +   A+++F  M     + +  TY ++I 
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGY 371
            L     ++ A  +   M+  G +PT   +  ++    + G  + +  FL    E  C  
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP--IRWLCENEEIRKAYEL 429
               +  L+   C  GK   A     +M    I+  + W     I   C+  +I  A  L
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISP-NQWTYTAMIDGYCKEGKIDVALSL 534

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
             RM  +       TY+A + G  K   + +A +   +++ Q L  ++I+Y+ L+ GLC+
Sbjct: 535 FERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
                 A ++F  M K  C  ++ ++  LIYGLC   KVD A RL      +G   T  T
Sbjct: 595 NTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDT 650

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL-FFNVM 608
           Y+ ++ GL +  R+ +   ++  M  +G +  +E YC L+ +  +  K+ DCAL  FN+M
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV-DCALEIFNLM 709

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G  P       L+  L   S+     +    L+      D  ++ +L++GL +EG +
Sbjct: 710 AVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769

Query: 669 SQASYLLDLMLGKGWVPDATTHGLL------VGSSVG-EEIDSR 705
                 L LM  +   P   T+ +L      VG S+G ++I +R
Sbjct: 770 DLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNR 813



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/536 (23%), Positives = 233/536 (43%), Gaps = 10/536 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L   G + E   + + M ++            + S  +  RV+ A+ ++ +M
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G   SV  +  ++  +    +     + +Y +M+K G+VPN  T N L+  L    R
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGK-MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGR 387

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
              AL  F  M   G   N++T+  +IKGL     ++ ++ +  +M   G    +  Y  
Sbjct: 388 FGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNT 447

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +   L  A R   MM+  +  PDE TY ELI+  C+  +LD A     +M+  G
Sbjct: 448 LIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCG 507

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAK 393
           ++P    +  ++ G C+ GK D +++      E+ C      +NA++       +F  A+
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAE 567

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
               KM ++ +  +  ++   I  LC+N     A+++   M   + +P+  TY++ + G 
Sbjct: 568 KFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGL 627

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+    + A R+       ++     +YS LV GLC+  +  EA ++   M + G S S 
Sbjct: 628 CQEGKVDAAERLTENGCEPTID----TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             +  L+   C   KVD A+ + +L    G       Y  ++  L  + RA++ L +   
Sbjct: 684 EIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQS 743

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L +    D+  + +L+  + ++     C  F  +M      P   T + L   L+
Sbjct: 744 LLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELS 799



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 198/443 (44%), Gaps = 32/443 (7%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V  + ++  ++F  G++  L  +  +I +LC++ K++EA+ +F  +   DL PD  TY  
Sbjct: 178 VTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTS 237

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI   C N +LD A ++ + M+  G  P    +  ++ GLC                   
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLC------------------- 278

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
                       N G+   A  +LE+M ++ I     ++ +PI  LC+   +  A  L+ 
Sbjct: 279 ------------NEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVR 326

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M      P   TY+A + G  +    E A+ ++ ++  + LV ++++Y+ L+  LC   
Sbjct: 327 SMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEG 386

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +   A+++F  M  +G   ++ ++N +I GL  M  ++KA+ + +     G S T  TY 
Sbjct: 387 RFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYN 446

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +++  +K     +    L  M    C  D   YC LI    +  KL     FF  M+K 
Sbjct: 447 TLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC 506

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+ P++ T  +++ G     ++ +  S   ++  +        YN +I+GL K    S+A
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
                 M  +G  P+  T+  L+
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLI 589



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 192/469 (40%), Gaps = 16/469 (3%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           +  TY  +I  L  AG +E   G+   M+KE          +L+       R   A+++ 
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIF 395

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF---VFVYKEMVKAGIVPNVDTLNYLLEV 211
             M   G   +   +N ++  +     G  D    + V+ +M+K G  P V T N L+  
Sbjct: 396 DWMEGHGTLANAQTYNQIIKGLF----GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +   + +A      M +  C P+ RT+  +I G     ++D + S   EM   GI   
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
              YT +I   C+E K++ A+ LF+ M          TY  +I+ L +  R  +A     
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA 571

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAG 387
            M   GL P    +  ++ GLC+    + +     +     C      + +L+   C  G
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631

Query: 388 KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           K   A+ + E   +  I   D+++  +  LC      +A +L+  M    + P    Y +
Sbjct: 632 KVDAAERLTENGCEPTI---DTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCS 688

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            ++  CK    + AL +F  ++ +        Y  L+  LC V +  EA+ +F  + K  
Sbjct: 689 LLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQ 748

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            +     + +L+ GL  +++ D  + ++ L      + T S +T I+L 
Sbjct: 749 WNSDLIVWTVLVDGL--LQEGDSDLCMKFLYLMESRNCTPSLHTYIILA 795



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 1/297 (0%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC+  ++++A  +  ++    + PD  TY++ +LG C+    + A  VF ++
Sbjct: 199 TFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM 258

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                  +S++YS L+ GLC   +I EA+++   M++ G   +  ++ + I  LC + +V
Sbjct: 259 VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV 318

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D AI L       G S +  TYT I+ GL +  + +  + +  +ML EG   +   Y  L
Sbjct: 319 DDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL 378

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  +  + +       F+ M   G + + +T   ++ GL     +       NK++ D  
Sbjct: 379 INELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDS 704
                 YN LI    K G  + A+  L +M      PD  T+  L+ G   G ++DS
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDS 495



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 138/286 (48%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+N  +  L + + +  A  +  ++  S V P   T++  +   CK    ++A+ VF ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               L  D+ +Y+ L+ G C+  K+ +A EVF  M K+GC+ +S +++ LI GLC   ++
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
            +A+ +       G   T  TYT  +  L  + R  D + ++  M  +GC+  V+ Y  +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  +    K++     ++ M+K GLVP+  T  +L++ L    +  +     + +     
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + ++  YN +I GL+      +A  + + ML  G  P   T+  L+
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 5/261 (1%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +TY  +I  L       E E  C  M ++          SL+     +   N A ++   
Sbjct: 548 ETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M       +   +  ++  + +E +     V   + + + G  P +DT + L+  L    
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGK-----VDAAERLTENGCEPTIDTYSTLVSGLCREG 662

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R   A      M +KG  P+   +  ++     + +VD ++ I   M   G Q  L  Y 
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC  ++ EEA+ +F+ +       D + +  L++ L +    D     L  M   
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782

Query: 337 GLTPTDDVFVDIVRGLCEVGK 357
             TP+   ++ + R L +VGK
Sbjct: 783 NCTPSLHTYIILARELSKVGK 803


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 263/556 (47%), Gaps = 14/556 (2%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYK 191
           A  +LV  +  +  ++ A R++     G   ++ D +       V   RG  AD + +  
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLI-----GSMPVAPDAYTYTPLIRVLCDRGRVADALSLLD 167

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M++ G  PNV T   LLE +   +  E A+     M  KGC PN  T+ ++I G+    
Sbjct: 168 DMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           RVDD+  +L  +   G Q +   YT ++  LC   + ++   LF  M   + MP+E+T++
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI   C    ++ A  +LE M   G      +   ++  +C+ G+ D++   L D   Y
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY 347

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKA 426
             +P    +  +L+  C A ++  AK +L +M        + ++N  I  LC+   I +A
Sbjct: 348 GCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQA 407

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             L+ +M          TY+A V G C   + + AL +FR +  +    ++I+Y+ L+ G
Sbjct: 408 IMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTG 464

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC  E++  A E+   M +  C  +  +FN+L+   C    +++AI L       G +  
Sbjct: 465 LCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPN 524

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ G+ K   ++D L +L  ++ +G + DV  +  +I  +S+++++++    F+
Sbjct: 525 LITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           V+   G+ P       +L GL    ++         +VS+  + + S Y ILI GL  EG
Sbjct: 585 VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 644

Query: 667 LTSQASYLLDLMLGKG 682
           L  +A  LL ++  +G
Sbjct: 645 LLKEAQDLLSVLCSRG 660



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 238/520 (45%), Gaps = 17/520 (3%)

Query: 222 LDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           LD  RR+       P++ T+  +I+ L    RV D++S+L +M   G Q  +  YT ++ 
Sbjct: 127 LDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            +CR +  E+A+ +   MRA    P+ +TY  +IN +C   R+DDA ++L  +   G  P
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 341 TDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
               +  +++GLC   ++D+        +E  C       + L+   C  G    A  +L
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306

Query: 397 EKMADRKIADCDSW-NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M +   A   +  NI I  +C+   +  A++LL  M      PD  +Y+  + G C+ 
Sbjct: 307 EQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRA 366

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             ++DA  +  ++   +   + ++++  +  LCQ   I +A+ +   MS++GC++   ++
Sbjct: 367 ERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426

Query: 516 NILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           N L+ G CV   +D A+ L RS+         T TYT ++ GL   +R      ++A+ML
Sbjct: 427 NALVNGFCVQGHIDSALELFRSMPCKP----NTITYTTLLTGLCNAERLDGAAELVAEML 482

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
              C  +V  + +L+    ++  L++       M++ G  P+  T  +LL G+       
Sbjct: 483 RGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSE 542

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH---- 690
                ++ LVS     D   ++ +I  L KE    +A  L  ++   G  P A  +    
Sbjct: 543 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKIL 602

Query: 691 -GLLVGSSVGEEIDSRRFAFDSSSFP-DSVSDILAEGLGN 728
            GL     +   ID   +   +   P +S   IL EGL +
Sbjct: 603 LGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAH 642



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 180/433 (41%), Gaps = 50/433 (11%)

Query: 281 MLCRENKLEEAIRLFKMMRALD-LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
           ++ RE+ L  A+RL +   + D   PD     +LI  LC   R  DA  +L      G +
Sbjct: 50  LIARED-LAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG-S 107

Query: 340 PTDDVFV--DIVRGLCEVGKFDESVNFLEDKC----GYVTSPHNALLECCCNAGKFFLAK 393
           P D VF    +V G C  G  D +   +         Y  +P   L+   C+ G+   A 
Sbjct: 108 PVD-VFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTP---LIRVLCDRGRVADAL 163

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L+ M  R    +  ++ + +  +C N    +A  +L  M      P+  TY+  + G 
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+    +DA  +  ++ +     D++SY+ L++GLC  ++  +  E+F  M +  C  + 
Sbjct: 224 CREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 283

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +F++LI   C    V++AI+                                   VL Q
Sbjct: 284 VTFDMLIRFFCRGGMVERAIQ-----------------------------------VLEQ 308

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   GCA +     I+I S+ +Q ++ D     N M   G  PD  +  ++L GL    +
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                  +N++V ++   +   +N  I  L ++GL  QA  L++ M   G      T+  
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428

Query: 693 LV-GSSVGEEIDS 704
           LV G  V   IDS
Sbjct: 429 LVNGFCVQGHIDS 441



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 132/324 (40%), Gaps = 15/324 (4%)

Query: 408 DSWNIP------IRWLCENEEIRKAYELLGRM-VVSSVVPDCATYSAFVLGKCKLCNYED 460
           +S N P      +R L   E++  A  L+ R        PD    +  +   C+     D
Sbjct: 35  ESPNAPNPASAHLRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSD 94

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A RV R        +D  +Y+ LV G C+   +  A  +   M     +  + ++  LI 
Sbjct: 95  AARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIR 151

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC   +V  A+ L       G      TYT ++  + +    +  + VL +M  +GC  
Sbjct: 152 VLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTP 211

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           ++  Y ++I  M  + ++ D     N +   G  PD  +  +LL GL    +   V    
Sbjct: 212 NIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELF 271

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
            +++  + + +   +++LI    + G+  +A  +L+ M   G   + T   +++ S    
Sbjct: 272 AEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQ 331

Query: 699 GEEIDSRRFAFDSSSF---PDSVS 719
           G   D+ +   D  S+   PD++S
Sbjct: 332 GRVDDAFKLLNDMGSYGCNPDTIS 355



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 11/239 (4%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG---LCQNMVKERYPNVRE 132
           + SAL++F+ +  +       +T     L  GL  N E ++G   L   M++   P    
Sbjct: 439 IDSALELFRSMPCKP------NTITYTTLLTGLC-NAERLDGAAELVAEMLRGDCPPNVV 491

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
               LV  F     +  A+ ++  M   G   ++  +N +L  I ++     D + +   
Sbjct: 492 TFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSS-EDALELLHG 550

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           +V  G+ P+V T + ++ +L + +RIE A+  F  +   G  P +  +  ++ GL     
Sbjct: 551 LVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCE 610

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +D+++     M   G     S Y  +I  L  E  L+EA  L  ++ +  ++   LT E
Sbjct: 611 IDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLTEE 669


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 257/544 (47%), Gaps = 11/544 (2%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M  AGI+P+V T +  +E   +    ++A   F  M ++ C  N  T+ ++I GL  +  
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V+++     EM D G+  +   Y  ++  LC+ ++L+EA  L   M    L P+ + Y  
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++   +  +  +A DIL++MI  G+ P   ++ +++RGLC++G+   +   L++     
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    +N L++          A  +L +M +  I  +  S+ I I  LC+N E ++A 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            LL  M+   + P+   Y+  ++G  K  N   A     +++  ++  D   Y+ L++GL
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
             V ++ EA E +  + K G      +++ LI+G C    ++KA +L     +SG     
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TYT ++ G  K    + +  +L  ML  G   D   Y I+I+++S    ++   +    
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           + K GLVPD     SL+ GL   + +      ++++  +        YN LI+G  + G 
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFDSSSFPDS-VSDI 721
            S+A  + D +L KG VP+  T+  L+        + +  D  +   D    PD+ V ++
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773

Query: 722 LAEG 725
           LA G
Sbjct: 774 LATG 777



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 244/595 (41%), Gaps = 68/595 (11%)

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNV 202
           + A +V   M      ++   +NV++  +     VEE  GF +      EMV  G+ P+ 
Sbjct: 260 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE------EMVDYGLSPDA 313

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T   L+  L + +R++ A      M   G  PN   +  ++ G +   +  ++  IL E
Sbjct: 314 FTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKE 373

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G+Q     Y  +I  LC+  +L  A +L K M  + L PD  TY  L+    +   
Sbjct: 374 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHD 433

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
            D A ++L +M   G+ P    +  ++ GLC+ G+  E+ N LE+       P    +  
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 493

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+      G   LA   LEKM    +  D   +N  I+ L     + +A E   ++    
Sbjct: 494 LIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG 553

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG----------- 486
           +VPD  TYS  + G CK  N E A ++ RQ+    L  ++ +Y+ L+EG           
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613

Query: 487 ------------------------LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
                                   L + E +  A  V   + KNG       ++ LI GL
Sbjct: 614 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 673

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLL-VVLAQMLVEGC 578
           C +  ++KA+ L       G       Y  ++ G  +   + RA+++   +LA+ LV  C
Sbjct: 674 CKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNC 733

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH---- 634
                 Y  LI    +   + D    +  M+  G+ PD      L  G +D + L     
Sbjct: 734 V----TYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALF 789

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           L     N+  +     + S++N L++G  K G   +   LL +M+ +  VP+A T
Sbjct: 790 LTEEMFNRGYA-----NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQT 839



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 230/545 (42%), Gaps = 68/545 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF-NVVLGAIVEEKRGFADFVFVYKEMV 194
           +LV  F+   +   A  +L  M S G + +  ++ N++ G     + G A  +   KEM+
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL--KEMI 410

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K G+ P+  T N L++  F+ +  + A +    M   G  PN  ++ I+I GL  N    
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 255 DSVSILGEMFDLG-----------------------------------IQLELSFYTCII 279
           ++ ++L EM   G                                   +  +L  Y  +I
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             L    ++EEA   +  ++   L+PDE TY  LI+  C+   L+ A+ +L  M+  GL 
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL-------LECCCNAGKFFLA 392
           P  D + D++ G  +   +++  + L+   G    P N +       L    N    F+ 
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              +EK  +  + D   ++  I  LC+  ++ KA  LL  M    + P    Y+A + G 
Sbjct: 651 LTEVEK--NGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 708

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+  +   A  VF  + A+ LV + ++Y+ L++G C+   IT+A +++  M   G +  +
Sbjct: 709 CRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDA 768

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVV 569
             +N+L  G      +++A+ L    ++ G +   S +  ++ G     KLQ  + LL V
Sbjct: 769 FVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHV 827

Query: 570 LAQMLVEGCALDVE-----------------AYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           +    +   A  VE                  +  L Q  + Q+     +L F  M+  G
Sbjct: 828 MMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKG 887

Query: 613 LVPDR 617
           L+P +
Sbjct: 888 LIPPK 892



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/495 (21%), Positives = 208/495 (42%), Gaps = 30/495 (6%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+   L+ L++   +T  + +A      M   G  P  R    ++K L+    ++    +
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
            G M   GI  ++  Y+  I   C+    + A ++F+ MR  D   +E+TY  +I+ LC 
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
           +  +++A    E+M+  GL+P    +  ++ GLC+  +  E+   L+             
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLD------------- 337

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            E  C+  K                 +   +   +    +  +  +A+++L  M+ + V 
Sbjct: 338 -EMSCSGLK----------------PNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQ 380

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+   Y   + G CK+     A ++ +++    L  D+ +Y+ L++G  Q      A E+
Sbjct: 381 PNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFEL 440

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M  +G   +  S+ I+I GLC   +  +A  L     S G       Y  +++G  K
Sbjct: 441 LNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSK 500

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                     L +M       D+  Y  LI+ +S   ++++   ++  + K GLVPD  T
Sbjct: 501 EGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFT 560

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+HG      L      + ++++     ++  Y  L+ G +K     + S +L  ML
Sbjct: 561 YSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSML 620

Query: 680 GKGWVPDATTHGLLV 694
           G G  PD   +G+++
Sbjct: 621 GSGDKPDNHIYGIVI 635


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 176/683 (25%), Positives = 300/683 (43%), Gaps = 72/683 (10%)

Query: 79   ALKIFKWVSIQK--RFQHTADTYC---KMILKLGLAGNVEE-MEGLCQNMVKER------ 126
            ALK  KWV  Q     +H    YC    +++K  +  + +  +  LCQ  +  +      
Sbjct: 844  ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 903

Query: 127  ---YP---NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
               YP   ++      L+  ++    ++ A+     +   GFK SV   N++L ++V++K
Sbjct: 904  MDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDK 963

Query: 181  RGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            R   + V+ +++EM   GI PNV T N L+  L     ++ A +  ++M + G  P   T
Sbjct: 964  R--TELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 1021

Query: 240  FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
            +  ++       R   ++ ++  M   GI+ ++  Y   I  LC  ++  +A  L K MR
Sbjct: 1022 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081

Query: 300  ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
               + P+E+TY  LIN   +  ++  A  +  +M    L+P    +  ++ G C VG F+
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141

Query: 360  ESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNI 412
            E++  L+       +   VT  +  LL   C   KF LAK +LE+M  +  +    ++ +
Sbjct: 1142 EALRLLDHMEAAGLRLNEVT--YGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 1199

Query: 413  PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
             I  LC+N  + +A +L+G M    V PD  TYS+ + G C++ N + A  +  ++    
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 473  LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            LVL+ I YS L+   CQ   +TEA++V+  M+ NG      + N+L+  LC   K+ +A 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 533  RL-----------RSLAY------------------------SSGTSYTTSTYTKIMLGL 557
            +             S+ Y                          G   +  TY  ++ GL
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 558  VK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
             K   L  AK  L  L    + G A+D   Y  L+    +   L +    F+ MV+  ++
Sbjct: 1380 CKGGNLVEAKKFLNRLH--YIPG-AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 1436

Query: 615  PDRETMLSLLHGLA-DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD  T  SLL GL   G  +  V      +   +   +  MY  L++GL K G    A Y
Sbjct: 1437 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 1496

Query: 674  LLDLMLGKGWVPDATTHGLLVGS 696
              + M+ KG  PD      ++ S
Sbjct: 1497 FFEEMMKKGTCPDTVAFNAIIDS 1519



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 159/663 (23%), Positives = 280/663 (42%), Gaps = 44/663 (6%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            T+  +I  L + GN+++   L + M +  +        +L+  +    R   A+ ++  M
Sbjct: 986  TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045

Query: 158  NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
               G +  V  +NV +  +    R    ++ + K+M K  I PN  T N L+    +  +
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLL-KKMRKEMISPNEVTYNTLINGFVKEGK 1104

Query: 218  IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            I  A   F  M K    PN  T+  +I G       ++++ +L  M   G++L    Y  
Sbjct: 1105 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 1164

Query: 278  IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            ++  LC+  K E A RL + MR  D++   + Y  LI+ LC+N  LD+A  ++ +M   G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224

Query: 338  LTPTDDVFVDIVRGLCEVGKFDESVNFL--EDKCGYVTSP--HNALLECCCNAGKFFLAK 393
            + P    +  ++ G C VG    +   +    + G V +   ++ L+   C  G    A 
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284

Query: 394  CILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM-----VVSSVVPDCA---- 443
             +   M  +   AD  + N+ +  LC + ++ +A + L  M     V +S+  DC     
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344

Query: 444  --------------------------TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                                      TY + + G CK  N  +A +   ++      +DS
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 1404

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            + Y+ L+   C+   + EAV +F  M +N     S +++ L+ GLC   K   A+ L   
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 538  AYSSGTSYTTST-YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
            A   GT +     YT ++ GL K    K       +M+ +G   D  A+  +I S S + 
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 1524

Query: 597  KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            ++     FF+ M   G+ P+  T   LLHG +    L    S  + ++ +    D   ++
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 1584

Query: 657  ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPD 716
             LI GL K G+      LL  M+ +G + D  T  +L+      E    R AFD  +F +
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY--SESGKMRKAFDLVNFMN 1642

Query: 717  SVS 719
            ++ 
Sbjct: 1643 TLG 1645



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/576 (22%), Positives = 254/576 (44%), Gaps = 44/576 (7%)

Query: 150  AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
            A+R+L +M + G +L+   +  +L  + + ++       + +  V   +V ++     L+
Sbjct: 1143 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI-AYTVLI 1201

Query: 210  EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
            + L +   ++ A+     M+K G  P+  T+  +I G      +  +  I+  M+  G+ 
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 270  LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            L    Y+ +I   C+   + EA++++ +M       D  T   L++ LC + +L +A   
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 330  LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCN 385
            L  M  IGL P    +  I+ G   +G    + +F +D  KCG   S   + +LL+  C 
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 386  AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             G    AK  L ++     A D   +N  +   C++  + +A  L  +MV ++V+PD  T
Sbjct: 1382 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441

Query: 445  YSAFVLGKCK-------LCNY-----------------------------EDALRVFRQV 468
            YS+ + G C+       +C +                             + A   F ++
Sbjct: 1442 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 1501

Query: 469  SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
              +    D+++++ +++   +  ++ +A + F  M   G   + +++NIL++G    + +
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 1561

Query: 529  DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV-VLAQMLVEGCALDVEAYCI 587
             + + L S     G      T+  ++LGL K     DL V +L +M++EG   D   + I
Sbjct: 1562 LRYLSLYSTMMREGIFPDKLTFHSLILGLSK-SGIPDLGVKLLGKMIMEGTLADQFTFNI 1620

Query: 588  LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
            LI   SE  K++      N M   G+ PDR+T   + +GL   S     +  +++++ + 
Sbjct: 1621 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 1680

Query: 648  EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
             +   + Y  LING+ + G    A  L D M   G+
Sbjct: 1681 VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 124/606 (20%), Positives = 254/606 (41%), Gaps = 13/606 (2%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            TY  +I      GN++  + +   M +      +    +L+++F  H  V  AM+V   M
Sbjct: 1231 TYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVM 1290

Query: 158  NSGGFKLSVDVFNVVLGAIVEE-KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
            N  G        NV++ ++  + K G A+    +  M + G+VPN  T + ++       
Sbjct: 1291 NCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH--MSRIGLVPNSITYDCIINGYGSIG 1348

Query: 217  RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               +A   F  M K G  P+  T+  ++KGL     + ++   L  +  +   ++   Y 
Sbjct: 1349 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 1408

Query: 277  CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             ++   C+   L EA+ LF  M   +++PD  TY  L+  LC   +   A  +    +  
Sbjct: 1409 TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 1468

Query: 337  G-LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            G L P   ++  +V GL + G    +  F E+     T P     NA+++ C   G+   
Sbjct: 1469 GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 1528

Query: 392  AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            A      M    +  +  ++NI +    + + + +   L   M+   + PD  T+ + +L
Sbjct: 1529 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 1588

Query: 451  GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
            G  K    +  +++  ++  +  + D  +++ L+    +  K+ +A ++   M+  G   
Sbjct: 1589 GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 1648

Query: 511  SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
               ++N +  GL       ++  +      +G     + Y  ++ G+ ++   +    + 
Sbjct: 1649 DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 1708

Query: 571  AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             +M   G      A   +++ +    K +D  L  + M++  L+P   T  +L+H     
Sbjct: 1709 DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 1768

Query: 631  SQLH--LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
            +++   L   G+ +L      LD   YN+LI G+   G ++ A  L + M  +   P+ T
Sbjct: 1769 AKIAEALKLKGVMELCGLK--LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1826

Query: 689  THGLLV 694
            T+ +LV
Sbjct: 1827 TYAVLV 1832



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/323 (20%), Positives = 138/323 (42%), Gaps = 5/323 (1%)

Query: 190  YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
            +  M   G+ PN+ T N LL    +   +   L  +  M ++G  P+  TF  +I GL  
Sbjct: 1533 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 1592

Query: 250  NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            +   D  V +LG+M   G   +   +  +I       K+ +A  L   M  L + PD  T
Sbjct: 1593 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 1652

Query: 310  YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
            Y  + N L +     ++  +L +M+  G+ P    ++ ++ G+C VG    +    ++  
Sbjct: 1653 YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 1712

Query: 370  GYVTSPH----NALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIR 424
                  H    +A++    + GK   A  +L+ M   R +    ++   +   C + +I 
Sbjct: 1713 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1772

Query: 425  KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            +A +L G M +  +  D   Y+  ++G C   +   A  ++ ++  + L  +  +Y+ LV
Sbjct: 1773 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1832

Query: 485  EGLCQVEKITEAVEVFCCMSKNG 507
            + +     + +  ++   + + G
Sbjct: 1833 DAISAANNLIQGEKLLTDLQERG 1855



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/484 (21%), Positives = 187/484 (38%), Gaps = 49/484 (10%)

Query: 174  GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            G +VE K+      F+ +     G V +V   N LL    ++  +  A+  F +M +   
Sbjct: 1383 GNLVEAKK------FLNRLHYIPGAVDSV-MYNTLLAETCKSGNLHEAVALFDKMVQNNV 1435

Query: 234  CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS-FYTCIIPMLCRENKLEEAI 292
             P+S T+  ++ GL    +   +V + G     G        YTC++  L +    + A 
Sbjct: 1436 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 1495

Query: 293  RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
              F+ M      PD + +  +I+      ++  AND    M   G+ P    +  ++ G 
Sbjct: 1496 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 1555

Query: 353  CEV----------------GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
             +                 G F + + F     G   S    L       G   L K I+
Sbjct: 1556 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDL-------GVKLLGKMIM 1608

Query: 397  EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            E      +AD  ++NI I    E+ ++RKA++L+  M    V PD  TY+    G  K  
Sbjct: 1609 EG----TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664

Query: 457  NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             + ++  V  ++    ++     Y  L+ G+C+V  I  A ++   M   G      + +
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 1724

Query: 517  ILIYGLC-------VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
             ++ GL         M  +D  +R+R L        T +T+T +M    +  +  + L +
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLP-------TIATFTTLMHRFCRDAKIAEALKL 1777

Query: 570  LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
               M + G  LDV AY +LI  M            +  M    L P+  T   L+  ++ 
Sbjct: 1778 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1837

Query: 630  GSQL 633
             + L
Sbjct: 1838 ANNL 1841



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 8/245 (3%)

Query: 130  VREALISLVFSF---VNHYRVNGAMRV---LVN-MNSGGFKLSVDVFNVVLGAIVEEKRG 182
            + E  ++  F+F   +N Y  +G MR    LVN MN+ G     D +N +   +  +K  
Sbjct: 1607 IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL-NKKSA 1665

Query: 183  FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            F +   V  EM++ G++P       L+  +     I+ A      M   G   +      
Sbjct: 1666 FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 1725

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +++GL+   + +D++ +L  M  + +   ++ +T ++   CR+ K+ EA++L  +M    
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1785

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            L  D + Y  LI  +C N     A ++ E+M    L P    +  +V  +       +  
Sbjct: 1786 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1845

Query: 363  NFLED 367
              L D
Sbjct: 1846 KLLTD 1850



 Score = 43.1 bits (100), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 78/193 (40%)

Query: 508  CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            C+   S F++LI        +D A+    L    G   +  T   I+  +VK +R + + 
Sbjct: 910  CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 969

Query: 568  VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             +  +M  +G   +V  + ILI  +  +  LK        M + G VP   T  +LL+  
Sbjct: 970  SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 1029

Query: 628  ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                +       I+ ++      D   YN+ I+ L     +++A  LL  M  +   P+ 
Sbjct: 1030 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 1089

Query: 688  TTHGLLVGSSVGE 700
             T+  L+   V E
Sbjct: 1090 VTYNTLINGFVKE 1102


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 175/670 (26%), Positives = 312/670 (46%), Gaps = 47/670 (7%)

Query: 69  VLDNTNDLSSALKIFKWV-SIQKRFQH-----TADTYCKMILKLGLAGNVEEMEGLCQNM 122
           +L NTN+   A +IFK + S      H        T   ++++  +   +EE+  L  + 
Sbjct: 9   LLKNTNNPRLAWRIFKRIFSSPSEESHGISLAATPTMACILVRAKMHEEIEELHNLILSS 68

Query: 123 VKERYPNVREALISLV--FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
             ++      +L+S+V  F+  NH          V       K  + ++NV+L + + E+
Sbjct: 69  SIQK--TKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRER 126

Query: 181 RGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           R   +FV ++YK+MV  GI P   T N L+  L +++ +++A + F  M +KGC PN  T
Sbjct: 127 R--VEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F I+++G       D  + +L  M   G+      Y  I+   CRE + +++ +L + MR
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMR 244

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIV---IGLT-PTDDVFVDIVRGLCEV 355
              L+PD +T+   I+ LC+  ++ DA+ I  DM +   +GL  P    +  +++G C+V
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304

Query: 356 GKFDESVNFLE-----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DS 409
           G  +++    E     D    + S +N  L+     GKF  A+ +L++M D+ I     S
Sbjct: 305 GLLEDAKTLFESIRENDDLVSLQS-YNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYS 363

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +NI +  LC+   +  A  ++G M  + V PD  TY   + G C +   + A  + +++ 
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
             + + ++ + + L+  L  + +I+EA E+   M++ G  L + + NI++ GLC   ++D
Sbjct: 424 RNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483

Query: 530 KAIRL-------RSLAYSS-GTSYTT---------------STYTKIMLGLVKLQRAKDL 566
           KAI +        S A  + G SY                  TY+ ++ GL K  R  + 
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             + A+M+ E    D  AY I I    +Q K+         M K G     ET  SL+ G
Sbjct: 544 KTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L   +Q+  +   ++++       +   YN  I  L + G    A+ LLD M+ K   P+
Sbjct: 604 LGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPN 663

Query: 687 ATTHGLLVGS 696
             +   L+G+
Sbjct: 664 VFSFKYLIGA 673



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/437 (21%), Positives = 192/437 (43%), Gaps = 36/437 (8%)

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL--DLMPDELTYEELINCLCENLRLDDA 326
           + +LS    ++ +  + N +++A   F+ +R+   +  P    Y  L+       R++  
Sbjct: 72  KTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFV 131

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
           + + +DM++ G++P    F  ++R LC+    D +    ++           + E  C  
Sbjct: 132 SWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDE-----------MPEKGCKP 180

Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
            +F                   ++ I +R  C+     K  ELL  M    V+P+   Y+
Sbjct: 181 NEF-------------------TFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYN 221

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             V   C+    +D+ ++  ++  + LV D ++++  +  LC+  K+ +A  +F  M  +
Sbjct: 222 TIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281

Query: 507 ---GCSLSSS-SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
              G    +S ++N+++ G C +  ++ A  L      +    +  +Y   + GLV+  +
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGK 341

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             +   VL QM+ +G    + +Y IL+  + +   L D      +M + G+ PD  T   
Sbjct: 342 FIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGC 401

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           LLHG     ++    S + +++ ++ + ++   NIL++ LW  G  S+A  LL  M  KG
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKG 461

Query: 683 WVPDATTHGLLVGSSVG 699
           +  D  T  ++V    G
Sbjct: 462 YGLDTVTCNIIVDGLCG 478



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/458 (21%), Positives = 196/458 (42%), Gaps = 38/458 (8%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGI 198
             V H +   A  VL  M   G   S+  +N+++  +   K G  +D   +   M + G+
Sbjct: 335 GLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLC--KLGMLSDAKTIVGLMKRNGV 392

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P+  T   LL       ++++A    + M +  C PN+ T  I++  L    R+ ++  
Sbjct: 393 SPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEE 452

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL----------------- 301
           +L +M + G  L+      I+  LC   +L++AI + K MR                   
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512

Query: 302 ------DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
                 + +PD +TY  L+N LC+  R  +A  +  +M+   L P    +   +   C+ 
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQ 572

Query: 356 GKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSW 410
           GK   +   L+D     C      +N+L+       + F    ++++M ++ I+ +  ++
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTY 632

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR---Q 467
           N  I++LCE  ++  A  LL  M+  ++ P+  ++   +   CK+ +++ A  VF     
Sbjct: 633 NTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVS 692

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  Q   L S+ +++L+    Q+ K TE +E        G  L +  +  L+  LC   +
Sbjct: 693 ICGQKEGLYSLMFNELLAA-GQLLKATELLEAVL---DRGFELGTFLYKDLVVSLCKKDE 748

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           ++ A  +       G  +  +    ++ GL K+   K+
Sbjct: 749 LEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKE 786



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 165/405 (40%), Gaps = 30/405 (7%)

Query: 86  VSIQKRFQHTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFV 142
           V + KR   + D  TY  ++      G V+  + L Q M++    PN     I L+ S  
Sbjct: 384 VGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI-LLHSLW 442

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA------------IVEEKR--------- 181
           N  R++ A  +L  MN  G+ L     N+++              IV+  R         
Sbjct: 443 NMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502

Query: 182 -GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
            G +    V   +++   +P++ T + LL  L +  R   A   F  M  +   P+S  +
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAY 562

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I I       ++  +  +L +M   G    L  Y  +I  L  +N++ E   L   MR 
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMRE 622

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + P+  TY   I  LCE  +++DA ++L++M+   + P    F  ++   C+V  FD 
Sbjct: 623 KGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDM 682

Query: 361 SVNFLEDK---CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRW 416
           +    E     CG     ++ +      AG+   A  +LE + DR        +   +  
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVS 742

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           LC+ +E+  A  +L +M+      D A     + G  K+ N ++A
Sbjct: 743 LCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEA 787


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/642 (24%), Positives = 288/642 (44%), Gaps = 17/642 (2%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           + L+  L    D  +AL++      +  F    + Y ++I KLG  G ++ M+ L   M 
Sbjct: 42  EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101

Query: 124 KERYPNVREALISLVFSFVNHYR----VNGAMRVLVNMNSGGFKLSVD--VFNVVLGAIV 177
           +E +    +  + +V SF++ Y      + A+ +++N     F +  D  V+N +L  +V
Sbjct: 102 REGH----QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLV 157

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           E  +       VY EM   GI P+V T N L++ L   +++ +A+     M  +G  P+ 
Sbjct: 158 EGSK-MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 216

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +++G +    ++ ++ +   M ++G          +I   C+  ++E+A+   + 
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
             A    PD++TY   +N LC+N  +  A  +++ M+  G  P    +  +V  LC+ G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 358 FDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
            +E+   L    +  C    +  N L+   C   +   A  +  ++  + ++ D  ++NI
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC+  +   A  L   M  S   PD  TY+  +   C L     AL + + + +  
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
               +I+Y+ +++GLC+  +I EA EVF  M   G S ++ +FN LI GLC  +K+D A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L +   S G      TY  I+    K    K    +L  M   G  +DV  Y  LI  +
Sbjct: 517 GLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +  + +        M   G+ P  +    +L  L   + +    S   ++    E  D+
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 653 SMYNILINGLWKEGLTSQASYLLDL-MLGKGWVPDATTHGLL 693
             Y I+  GL + G   + ++   L M+ KG++P+ ++  +L
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 211/448 (47%), Gaps = 7/448 (1%)

Query: 254 DDSVS-ILGEMFDL-GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           DD+V  IL ++  L GIQ +   Y  ++ +L   +K++    ++  M A  + PD +T+ 
Sbjct: 126 DDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFN 185

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLED 367
            L+  LC   ++  A  +LE+M   G+ P +  F  +++G  E G  + ++      LE 
Sbjct: 186 TLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 245

Query: 368 KCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
            C       N L+   C  G+   A   I +++AD    D  ++N  +  LC+N+ +  A
Sbjct: 246 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +++  MV     PD  TY+  V   CK    E+A  +  Q+  +  + D  +++ L+  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC   ++ EA+++   ++  G S    +FNILI  LC +     A+RL     +SG +  
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++  L  L +    L +L  M   GC      Y  +I  + ++ ++++    F+
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   G+  +  T  +L+ GL    ++      IN+++S+    ++  YN ++    K+G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +A+ +L+ M   G+  D  T+G L+
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLI 573



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 5/246 (2%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D++ Y+ L+  L +  K+     V+  M   G      +FN L+  LC   +V  A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               S G +   +T+T +M G V+    +  L V A+ML  GC+       +LI    + 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            +++D   +    +  G  PD+ T  + ++GL     +      ++ +V +    D   Y
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFD 710
           NI++N L K G   +A  +L+ M+ +G +PD TT   L+     G+ + E +D  R    
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 711 SSSFPD 716
               PD
Sbjct: 385 KGVSPD 390


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 270/560 (48%), Gaps = 50/560 (8%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           +V MN    + SV  F   LG+I ++K+ ++  V +  +M   G+  NV +LN L+  L 
Sbjct: 87  MVRMNP---RPSVVEFGKFLGSIAKKKQ-YSSAVSLCNQMDLFGVTHNVYSLNVLINCLC 142

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
             + ++ A+    +M K G  P++ TF  +I GL    ++ ++V +  EM   G +  + 
Sbjct: 143 RLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVI 202

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I  LC+      A+R+F+ M      P+ +TY  +I+ LC++  +++A + L +M
Sbjct: 203 SYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEM 262

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
           +  G+ P    +  I+ G C +G+ +E+    ++  G    P     N L++  C  G  
Sbjct: 263 VDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMV 322

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A+C+ E M ++    +  ++N  +   C + ++ +A ++LG M+     P+ ++Y+  
Sbjct: 323 SEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNIL 382

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G CK     +A R+  ++S ++L  D+++YS L++GLCQV +  EA+ +F  M  +G 
Sbjct: 383 INGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGL 442

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKD 565
                +++IL+ G C    +D+A++L    +          YT ++ G+    KL+ AK+
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKE 502

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           L    +++  +G   D+  Y ++I+ + ++    +   FF  M   G +P          
Sbjct: 503 L---FSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP---------- 549

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                                    DS  YN++I G  +   +S A  L+D M+GK +  
Sbjct: 550 -------------------------DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSA 584

Query: 686 DATTHGLLVGSSVGEEIDSR 705
           D++T  +L+     +EI SR
Sbjct: 585 DSSTFQMLLDLESHDEIISR 604



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 239/513 (46%), Gaps = 16/513 (3%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I+ AL  F RM +    P+   F   +  +    +   +VS+  +M   G+   +     
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LCR + ++ A+ +   M  L + PD +T+  LIN LC   ++ +A  +  +M+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             P    +  ++ GLC+ G    +V            P    +N +++  C       A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             L +M DR I  D  ++N  +   C   ++ +A  L   MV  +V+PD  T++  V G 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK     +A  V   ++ +    ++ +Y+ L++G C   ++ EA++V   M   GC+ + 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           SS+NILI G C  +++++A RL S       +  T TY+ +M GL ++ R ++ L +  +
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   D+ AY IL+    +   L +       M +  + P+      L+ G+    +
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L +     +KL +D    D   YN++I GL KEGL+ +A      M   G++PD+ ++ +
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNV 556

Query: 693 LV-------GSSVG----EEIDSRRFAFDSSSF 714
           ++        SS      +E+  +RF+ DSS+F
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 172/380 (45%), Gaps = 45/380 (11%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVP 200
           VN A+  L  M   G    V  +N +L      G + E  R       ++KEMV   ++P
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR-------LFKEMVGRNVMP 304

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +  T N L++ L +   +  A      M +KG  PN+ T+  ++ G   ++++D+++ +L
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL 364

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
           G M   G    LS Y  +I   C+  ++ EA RL   M   +L PD +TY  L+  LC+ 
Sbjct: 365 GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQV 424

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
            R  +A ++ ++M   GL P    +  ++ G C+ G  DE++                  
Sbjct: 425 GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK----------------- 467

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                         +L++M +R+I  +   + I IR +    ++  A EL  ++    + 
Sbjct: 468 --------------LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G  K    ++A   FR++     + DS SY+ +++G  Q +  + A+++
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQL 573

Query: 500 FCCMSKNGCSLSSSSFNILI 519
              M     S  SS+F +L+
Sbjct: 574 IDEMVGKRFSADSSTFQMLL 593



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 17/163 (10%)

Query: 115 MEGLCQ--------NMVKER-----YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+GLCQ        N+ KE       P++    I L+  F  H  ++ A+++L  M+   
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI-LLDGFCKHGHLDEALKLLKEMHERR 476

Query: 162 FKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            K ++ ++ +++ G  +  K   A  +F   ++   GI P++ T N +++ L +    + 
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELF--SKLSADGIRPDIWTYNVMIKGLLKEGLSDE 534

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           A + FR+M   G  P+S ++ ++I+G + N     ++ ++ EM
Sbjct: 535 AYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 176/683 (25%), Positives = 300/683 (43%), Gaps = 72/683 (10%)

Query: 79  ALKIFKWVSIQK--RFQHTADTYC---KMILKLGLAGNVEE-MEGLCQNMVKER------ 126
           ALK  KWV  Q     +H    YC    +++K  +  + +  +  LCQ  +  +      
Sbjct: 93  ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 152

Query: 127 ---YP---NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
              YP   ++      L+  ++    ++ A+     +   GFK SV   N++L ++V++K
Sbjct: 153 MDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDK 212

Query: 181 RGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           R   + V+ +++EM   GI PNV T N L+  L     ++ A +  ++M + G  P   T
Sbjct: 213 R--TELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++       R   ++ ++  M   GI+ ++  Y   I  LC  ++  +A  L K MR
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + P+E+TY  LIN   +  ++  A  +  +M    L+P    +  ++ G C VG F+
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 360 ESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNI 412
           E++  L+       +   VT  +  LL   C   KF LAK +LE+M  +  +    ++ +
Sbjct: 391 EALRLLDHMEAAGLRLNEVT--YGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 448

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC+N  + +A +L+G M    V PD  TYS+ + G C++ N + A  +  ++    
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           LVL+ I YS L+   CQ   +TEA++V+  M+ NG      + N+L+  LC   K+ +A 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 533 RL-----------RSLAY------------------------SSGTSYTTSTYTKIMLGL 557
           +             S+ Y                          G   +  TY  ++ GL
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 558 VK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            K   L  AK  L  L    + G A+D   Y  L+    +   L +    F+ MV+  ++
Sbjct: 629 CKGGNLVEAKKFLNRLH--YIPG-AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 685

Query: 615 PDRETMLSLLHGLA-DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
           PD  T  SLL GL   G  +  V      +   +   +  MY  L++GL K G    A Y
Sbjct: 686 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 745

Query: 674 LLDLMLGKGWVPDATTHGLLVGS 696
             + M+ KG  PD      ++ S
Sbjct: 746 FFEEMMKKGTCPDTVAFNAIIDS 768



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 159/663 (23%), Positives = 280/663 (42%), Gaps = 44/663 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+  +I  L + GN+++   L + M +  +        +L+  +    R   A+ ++  M
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G +  V  +NV +  +    R    ++ + K+M K  I PN  T N L+    +  +
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLL-KKMRKEMISPNEVTYNTLINGFVKEGK 353

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I  A   F  M K    PN  T+  +I G       ++++ +L  M   G++L    Y  
Sbjct: 354 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 413

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  LC+  K E A RL + MR  D++   + Y  LI+ LC+N  LD+A  ++ +M   G
Sbjct: 414 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFL--EDKCGYVTSP--HNALLECCCNAGKFFLAK 393
           + P    +  ++ G C VG    +   +    + G V +   ++ L+   C  G    A 
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533

Query: 394 CILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM-----VVSSVVPDCA---- 443
            +   M  +   AD  + N+ +  LC + ++ +A + L  M     V +S+  DC     
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593

Query: 444 --------------------------TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                                     TY + + G CK  N  +A +   ++      +DS
Sbjct: 594 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 653

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           + Y+ L+   C+   + EAV +F  M +N     S +++ L+ GLC   K   A+ L   
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 538 AYSSGTSYTTST-YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           A   GT +     YT ++ GL K    K       +M+ +G   D  A+  +I S S + 
Sbjct: 714 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 773

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           ++     FF+ M   G+ P+  T   LLHG +    L    S  + ++ +    D   ++
Sbjct: 774 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 833

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPD 716
            LI GL K G+      LL  M+ +G + D  T  +L+      E    R AFD  +F +
Sbjct: 834 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY--SESGKMRKAFDLVNFMN 891

Query: 717 SVS 719
           ++ 
Sbjct: 892 TLG 894



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/576 (22%), Positives = 252/576 (43%), Gaps = 44/576 (7%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+R+L +M + G +L+   +  +L  + + ++       + +  V   +V ++     L+
Sbjct: 392 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI-AYTVLI 450

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           + L +   ++ A+     M+K G  P+  T+  +I G      +  +  I+  M+  G+ 
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
           L    Y+ +I   C+   + EA++++ +M       D  T   L++ LC + +L +A   
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCN 385
           L  M  IGL P    +  I+ G   +G    + +F +D  KCG   S   + +LL+  C 
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 630

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G    AK  L ++     A D   +N  +   C++  + +A  L  +MV ++V+PD  T
Sbjct: 631 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 690

Query: 445 YSAFVLGKC------------------------------------KLCNYEDALRVFRQV 468
           YS+ + G C                                    K  + + A   F ++
Sbjct: 691 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 750

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    D+++++ +++   +  ++ +A + F  M   G   + +++NIL++G    + +
Sbjct: 751 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 810

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV-VLAQMLVEGCALDVEAYCI 587
            + + L S     G      T+  ++LGL K     DL V +L +M++EG   D   + I
Sbjct: 811 LRYLSLYSTMMREGIFPDKLTFHSLILGLSK-SGIPDLGVKLLGKMIMEGTLADQFTFNI 869

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI   SE  K++      N M   G+ PDR+T   + +GL   S     +  +++++ + 
Sbjct: 870 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 929

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
            +   + Y  LING+ + G    A  L D M   G+
Sbjct: 930 VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 124/606 (20%), Positives = 254/606 (41%), Gaps = 13/606 (2%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            TY  +I      GN++  + +   M +      +    +L+++F  H  V  AM+V   M
Sbjct: 480  TYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVM 539

Query: 158  NSGGFKLSVDVFNVVLGAIVEE-KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
            N  G        NV++ ++  + K G A+    +  M + G+VPN  T + ++       
Sbjct: 540  NCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH--MSRIGLVPNSITYDCIINGYGSIG 597

Query: 217  RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               +A   F  M K G  P+  T+  ++KGL     + ++   L  +  +   ++   Y 
Sbjct: 598  DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 657

Query: 277  CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             ++   C+   L EA+ LF  M   +++PD  TY  L+  LC   +   A  +    +  
Sbjct: 658  TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 717

Query: 337  G-LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            G L P   ++  +V GL + G    +  F E+     T P     NA+++ C   G+   
Sbjct: 718  GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 777

Query: 392  AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            A      M    +  +  ++NI +    + + + +   L   M+   + PD  T+ + +L
Sbjct: 778  ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 837

Query: 451  GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
            G  K    +  +++  ++  +  + D  +++ L+    +  K+ +A ++   M+  G   
Sbjct: 838  GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 897

Query: 511  SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
               ++N +  GL       ++  +      +G     + Y  ++ G+ ++   +    + 
Sbjct: 898  DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 957

Query: 571  AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             +M   G      A   +++ +    K +D  L  + M++  L+P   T  +L+H     
Sbjct: 958  DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 1017

Query: 631  SQLH--LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
            +++   L   G+ +L      LD   YN+LI G+   G ++ A  L + M  +   P+ T
Sbjct: 1018 AKIAEALKLKGVMELCGLK--LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1075

Query: 689  THGLLV 694
            T+ +LV
Sbjct: 1076 TYAVLV 1081



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/323 (20%), Positives = 138/323 (42%), Gaps = 5/323 (1%)

Query: 190  YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
            +  M   G+ PN+ T N LL    +   +   L  +  M ++G  P+  TF  +I GL  
Sbjct: 782  FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 841

Query: 250  NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            +   D  V +LG+M   G   +   +  +I       K+ +A  L   M  L + PD  T
Sbjct: 842  SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 901

Query: 310  YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
            Y  + N L +     ++  +L +M+  G+ P    ++ ++ G+C VG    +    ++  
Sbjct: 902  YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 961

Query: 370  GYVTSPH----NALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIR 424
                  H    +A++    + GK   A  +L+ M   R +    ++   +   C + +I 
Sbjct: 962  ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1021

Query: 425  KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            +A +L G M +  +  D   Y+  ++G C   +   A  ++ ++  + L  +  +Y+ LV
Sbjct: 1022 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1081

Query: 485  EGLCQVEKITEAVEVFCCMSKNG 507
            + +     + +  ++   + + G
Sbjct: 1082 DAISAANNLIQGEKLLTDLQERG 1104



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 106/484 (21%), Positives = 187/484 (38%), Gaps = 49/484 (10%)

Query: 174  GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            G +VE K+      F+ +     G V +V   N LL    ++  +  A+  F +M +   
Sbjct: 632  GNLVEAKK------FLNRLHYIPGAVDSV-MYNTLLAETCKSGNLHEAVALFDKMVQNNV 684

Query: 234  CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS-FYTCIIPMLCRENKLEEAI 292
             P+S T+  ++ GL    +   +V + G     G        YTC++  L +    + A 
Sbjct: 685  LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 744

Query: 293  RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
              F+ M      PD + +  +I+      ++  AND    M   G+ P    +  ++ G 
Sbjct: 745  YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 804

Query: 353  CEV----------------GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
             +                 G F + + F     G   S    L       G   L K I+
Sbjct: 805  SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDL-------GVKLLGKMIM 857

Query: 397  EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            E      +AD  ++NI I    E+ ++RKA++L+  M    V PD  TY+    G  K  
Sbjct: 858  EG----TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913

Query: 457  NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             + ++  V  ++    ++     Y  L+ G+C+V  I  A ++   M   G      + +
Sbjct: 914  AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 973

Query: 517  ILIYGLC-------VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
             ++ GL         M  +D  +R+R L        T +T+T +M    +  +  + L +
Sbjct: 974  AMVRGLLHCGKTEDAMLVLDHMLRMRLLP-------TIATFTTLMHRFCRDAKIAEALKL 1026

Query: 570  LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
               M + G  LDV AY +LI  M            +  M    L P+  T   L+  ++ 
Sbjct: 1027 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1086

Query: 630  GSQL 633
             + L
Sbjct: 1087 ANNL 1090



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 8/245 (3%)

Query: 130  VREALISLVFSF---VNHYRVNGAMRV---LVN-MNSGGFKLSVDVFNVVLGAIVEEKRG 182
            + E  ++  F+F   +N Y  +G MR    LVN MN+ G     D +N +   +  +K  
Sbjct: 856  IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL-NKKSA 914

Query: 183  FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            F +   V  EM++ G++P       L+  +     I+ A      M   G   +      
Sbjct: 915  FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 974

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +++GL+   + +D++ +L  M  + +   ++ +T ++   CR+ K+ EA++L  +M    
Sbjct: 975  MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1034

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            L  D + Y  LI  +C N     A ++ E+M    L P    +  +V  +       +  
Sbjct: 1035 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1094

Query: 363  NFLED 367
              L D
Sbjct: 1095 KLLTD 1099



 Score = 43.1 bits (100), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 78/193 (40%)

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C+   S F++LI        +D A+    L    G   +  T   I+  +VK +R + + 
Sbjct: 159 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M  +G   +V  + ILI  +  +  LK        M + G VP   T  +LL+  
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               +       I+ ++      D   YN+ I+ L     +++A  LL  M  +   P+ 
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338

Query: 688 TTHGLLVGSSVGE 700
            T+  L+   V E
Sbjct: 339 VTYNTLINGFVKE 351


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/623 (23%), Positives = 289/623 (46%), Gaps = 17/623 (2%)

Query: 67  IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTY--CKMILKLGLAGNVEEMEGLCQNMVK 124
           +R L   +DL+ A ++ +  S +       D Y   K+I  L   G   +   + +    
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRG---EAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEA 102

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
              P    A  +LV  +  + R++ A R++ +M           +  ++  + +  R   
Sbjct: 103 SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGR-VG 158

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + +  +M++ G  P+V T   LLE + +++    A++    M  KGC PN  T+ ++I
Sbjct: 159 DALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVII 218

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G+    RVDD+  IL  +   G Q ++  YT ++  LC   + ++   LF  M     +
Sbjct: 219 NGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV 278

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+E+T++ L+   C    ++ A  +L+ M   G TP   +   ++  +C+ G+ D++ +F
Sbjct: 279 PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDF 338

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCE 419
           L +   Y  +P    +  +L   C AG++  AK +L +M  +     + ++N  I  LC+
Sbjct: 339 LNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ 398

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              I +A +L+  M          TY+A V G C     + AL +F  +  +    ++I+
Sbjct: 399 KGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP---NTIT 455

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ GLC  E++  A E+   M +  C L++ +FN+L+   C    V++A+ L +   
Sbjct: 456 YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G +    T+  ++ G+ K   +++ L +L  ++ +G +LD   Y  ++  +S +++ +
Sbjct: 516 EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTE 575

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +     + +   G+ P       +L  L    +          +VS+  + + S Y ILI
Sbjct: 576 EAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 635

Query: 660 NGLWKEGLTSQASYLLDLMLGKG 682
            GL  EGL  +A Y+L  +  KG
Sbjct: 636 EGLAHEGLLKEARYVLSELYAKG 658



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 258/561 (45%), Gaps = 18/561 (3%)

Query: 180 KRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           +RG  +D   V +    +G   +V   N L+       R+++A      M      P++ 
Sbjct: 86  RRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAY 142

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +I+GL    RV D++++L +M   G Q  +  YT ++  +C+ +   EA+ +   M
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           RA    P+ +TY  +IN +C   R+DDA +IL  +   G  P    +  +++GLC   ++
Sbjct: 203 RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRW 262

Query: 359 DES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW-NIP 413
           D+        ++ KC       + L+   C  G    A  +L++M+        +  NI 
Sbjct: 263 DDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIV 322

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  +C+   +  AY+ L  M +    PD  +Y+  + G C+   +E A  +  ++  ++ 
Sbjct: 323 INAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNC 382

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             + ++++  +  LCQ   I +A+++   M + GCS+   ++N L++G CV  +VD A+ 
Sbjct: 383 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 442

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L +   +      T TYT ++ GL   +R      +LA M+ + C L+   + +L+    
Sbjct: 443 LFN---NLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFC 499

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           ++  +++     N M++ G  P+  T  +LL G+            ++ LVS    LD+ 
Sbjct: 500 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTI 559

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-----SVGEEIDSRRFA 708
            Y+ +++ L +E  T +A  +L  +   G  P    +  ++ +        + ID   + 
Sbjct: 560 TYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYM 619

Query: 709 FDSSSFP-DSVSDILAEGLGN 728
             +   P +S   IL EGL +
Sbjct: 620 VSNGCMPNESTYIILIEGLAH 640



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 119/277 (42%), Gaps = 3/277 (1%)

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           IR LC       A  +L     S    D   Y+  V G C+    + A R+   +++  +
Sbjct: 81  IRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL---IASMPV 137

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D+ +Y+ ++ GLC   ++ +A+ +   M + GC  S  ++ +L+  +C      +A+ 
Sbjct: 138 PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMN 197

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +     + G +    TY  I+ G+ +  R  D   +L ++   G   D+ +Y  +++ + 
Sbjct: 198 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 257

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
              +  D  + F  MV    VP+  T   L+     G  +      + ++       +++
Sbjct: 258 AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 317

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           + NI+IN + K+G    A   L+ M   G  PD  ++
Sbjct: 318 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISY 354



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 8/311 (2%)

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +R L   +++ +A  L+         PD    +  +   C+     DA RV R   A   
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
            +D  +Y+ LV G C+  ++  A  +   M        + ++  +I GLC   +V  A+ 
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L       G   +  TYT ++  + K     + + VL +M  +GC  ++  Y ++I  M 
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
            + ++ D     N +   G  PD  +  ++L GL    +   V     ++V    V +  
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDS 711
            +++L+    + G+  +A  +L  M   G  P+ T   +++ +    G   D+  F  + 
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 712 SSF---PDSVS 719
             +   PD++S
Sbjct: 343 GMYGCNPDTIS 353



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 6/242 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++    + G V+    L  N+  E  PN      +L+    +  R++ A  +L  M
Sbjct: 423 TYNALVHGFCVQGRVDSALELFNNLPCE--PNTI-TYTTLLTGLCHAERLDAAAELLAGM 479

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETN 216
                 L+   FNV++    +  +GF +    +  +M++ G  PN+ T N LL+ + +  
Sbjct: 480 IQKDCPLNAVTFNVLVSFFCQ--KGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E AL+    +  KG   ++ T+  V+  L    R ++++ +L  + D+G++ ++  Y 
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 597

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            I+  LC+  + ++AI  F  M +   MP+E TY  LI  L     L +A  +L ++   
Sbjct: 598 KILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 657

Query: 337 GL 338
           G+
Sbjct: 658 GV 659



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 92/440 (20%), Positives = 165/440 (37%), Gaps = 108/440 (24%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A  +L  ++S GF+  +  +  VL  +   +R + D   ++ EMV    VPN  T 
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARR-WDDVKVLFAEMVDKKCVPNEVTF 284

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L+        +E A+   ++M + GC PN+    IVI  +    RVDD+   L  M  
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 344

Query: 266 LGIQLELSFYTCIIPMLCRENK-----------------------------------LEE 290
            G   +   YT ++  LCR  +                                   +E+
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 404

Query: 291 AIRLFKMM--------------------------RALDLM------PDELTYEELINCLC 318
           AI+L ++M                           AL+L       P+ +TY  L+  LC
Sbjct: 405 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLC 464

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH-- 376
              RLD A ++L  MI          F  +V   C+ G  +E++  +     +  +P+  
Sbjct: 465 HAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 524

Query: 377 --NALLECC---CNAGKFF------LAKCI-LEKMADRKIADCDS--------------- 409
             N LL+     CN+ +        ++K + L+ +    + D  S               
Sbjct: 525 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 584

Query: 410 -----------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
                      +N  +  LC+  E  +A +    MV +  +P+ +TY   + G       
Sbjct: 585 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 644

Query: 459 EDALRVFRQVSAQSLVLDSI 478
           ++A  V  ++ A+ ++  S+
Sbjct: 645 KEARYVLSELYAKGVLSKSL 664


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 165/687 (24%), Positives = 299/687 (43%), Gaps = 62/687 (9%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           +   L P H+  V+    D   AL++F     +  F+HTA TY  ++ KLG  G  EEME
Sbjct: 1   MSRTLLPKHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEME 60

Query: 117 GLCQNMVKERYPN--VREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
            L   M +E   N  +  A I  + ++    +V  A+     M+      SV   N ++ 
Sbjct: 61  KLLSEM-RENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMN 119

Query: 175 AIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            +VE   G+ +    VY  M   G+  +V T    ++   +T R  +AL   R M + GC
Sbjct: 120 ILVE--FGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGC 177

Query: 234 -----------------------------------CPNSRTFEIVIKGLIANSRVDDSVS 258
                                              CP+   F  ++  L     V +S  
Sbjct: 178 DSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESER 237

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM---------PDELT 309
           +LG++   G+   L  +   +  LCRE  L+ A+R  +++ A + +         PD+LT
Sbjct: 238 LLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLT 297

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  +I+  C+   + DAN +L+D +  G  P +  +  ++ G C+ G  D ++   +D  
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIR 424
           G    P    +N L++     G    A  ++ +MA+   + +  ++N+ I  LC+   + 
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  L+   +     PD  TY+  + G CK    + A  +  ++ +Q +  D I+Y+ L+
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+  K  E +E+F  M + GC+ +  ++NI++  LC  +KV++A+ L     S G  
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA-YCILIQSMSEQNKLKDCAL 603
               ++  +  G  K+        +  +M  +       A Y I++ + SEQ  +     
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE---VLDSSMYNILIN 660
            F+VM  +G  PD  T   ++ G     ++  ++ G   L+ + E   +   + +  ++N
Sbjct: 598 LFSVMKNSGCDPDNYTYRVVIDGFC---KMGNITQGYKFLLENMEKRFIPSLTTFGRVLN 654

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDA 687
            L  +    +A  ++ LML KG VP+ 
Sbjct: 655 CLCVKDKVHEAVGIIHLMLQKGIVPET 681



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 200/487 (41%), Gaps = 41/487 (8%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+D F RM    C P+  +   ++  L+     + +  +   M D G+Q ++  YT
Sbjct: 91  KVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYT 150

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             I   C+  +   A+RL + M  L    + + Y  ++  L ++   D A ++ ++M+  
Sbjct: 151 IRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLAR 210

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
            L P      D+V                           N L+   C  G  F ++ +L
Sbjct: 211 CLCP------DVV-------------------------AFNKLVHVLCKKGLVFESERLL 239

Query: 397 EKMADRKI-ADCDSWNIPIRWLCE---------NEEIRKAYELLGRMVVSSVVPDCATYS 446
            K+  R +  +  ++NI ++ LC          N  + +A E L +MV     PD  TY+
Sbjct: 240 GKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYN 299

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G CK    +DA RV +    +    D  +Y  L+ G C+      A+ VF      
Sbjct: 300 SIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGK 359

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G   S   +N LI GL     +  A++L +    +G      TY  ++ GL K+    D 
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             ++   + +GC  D+  Y  LI    +Q KL       N M   G+ PD  T  +LL+G
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L    +   V      +       +   YNI+++ L K    ++A  LL  M  KG  PD
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539

Query: 687 ATTHGLL 693
             + G L
Sbjct: 540 VVSFGTL 546


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/651 (24%), Positives = 290/651 (44%), Gaps = 52/651 (7%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           + L+  L    D  +AL++      +  F    + Y ++I KLG  G ++ M+ L   M 
Sbjct: 42  EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101

Query: 124 KERYPNVREALISLVFSFVNHYR----VNGAMRVLVNMNSGGFKLSVD--VFNVVLGAIV 177
           +E +    +  + +V SF++ Y      + A+ +++N     F +  D  V+N +L  +V
Sbjct: 102 REGH----QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLV 157

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           E  +       VY EM   GI P+V T N L++ L   +++ +A+     M  +G  P+ 
Sbjct: 158 EGSK-MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDE 216

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLG---------------------------IQL 270
            TF  +++G +    ++ ++ +   M ++G                           IQ 
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 271 ELS--------FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           E++         Y   +  LC+ + +  A+++  +M      PD  TY  ++NCLC+N +
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NA 378
           L++A  IL  M+  G  P    F  ++  LC   + +E+++          SP     N 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 379 LLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C  G   LA  + E+M +     D  ++N  I  LC   ++ KA +LL  M  + 
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
                 TY+  + G CK    E+A  VF Q+  Q +  ++I+++ L++GLC+ +KI +A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E+   M   G   ++ ++N ++   C    + KA  +     ++G      TY  ++ GL
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K  R +  L VL  M ++G     +AY  ++QS+  +N ++D    F  M + G  PD 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 618 ETMLSLLHGL-ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
            T   +  GL   G  +      + ++V    + + S + +L  GL   G+
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 211/448 (47%), Gaps = 7/448 (1%)

Query: 254 DDSVS-ILGEMFDL-GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           DD+V  IL ++  L GIQ +   Y  ++ +L   +K++    ++  M A  + PD +T+ 
Sbjct: 126 DDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFN 185

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLED 367
            L+  LC   ++  A  +LE+M   G+ P +  F  +++G  E G  + ++      LE 
Sbjct: 186 TLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 245

Query: 368 KCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
            C       N L+   C  G+   A   I +++AD    D  ++N  +  LC+N+ +  A
Sbjct: 246 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +++  MV     PD  TY+  V   CK    E+A  +  Q+  +  + D  +++ L+  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC   ++ EA+++   ++  G S    +FNILI  LC +     A+RL     +SG +  
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++  L  L +    L +L  M   GC      Y  +I  + ++ ++++    F+
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   G+  +  T  +L+ GL    ++      IN+++S+    ++  YN ++    K+G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +A+ +L+ M   G+  D  T+G L+
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLI 573



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 5/246 (2%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D++ Y+ L+  L +  K+     V+  M   G      +FN L+  LC   +V  A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               S G +   +T+T +M G V+    +  L V A+ML  GC+       +LI    + 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            +++D   +    +  G  PD+ T  + ++GL     +      ++ +V +    D   Y
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFD 710
           NI++N L K G   +A  +L+ M+ +G +PD TT   L+     G+ + E +D  R    
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 711 SSSFPD 716
               PD
Sbjct: 385 KGVSPD 390


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 173/668 (25%), Positives = 314/668 (47%), Gaps = 47/668 (7%)

Query: 69  VLDNTNDLSSALKIFKWV-SIQKRFQH-----TADTYCKMILKLGLAGNVEEMEGLCQNM 122
           +L NTN+   A +IFK + S      H        T  +++++  +   ++E+  L  + 
Sbjct: 9   LLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSS 68

Query: 123 VKERYPNVREALISLV--FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
             ++      +L+S+V  F+  NH         LV       K SV ++N++L + ++E+
Sbjct: 69  SIQK--TKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKER 126

Query: 181 RGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           R   +FV ++YK+MV  GI P   T N L+  L +++ +++A + F  M +KGC PN  T
Sbjct: 127 R--VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F I+++G       D  + +L  M   G+      Y  I+   CRE + +++ ++ + MR
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIV---IGLT-PTDDVFVDIVRGLCEV 355
              L+PD +T+   I+ LC+  ++ DA+ I  DM +   +GL  P    +  +++G C+V
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304

Query: 356 GKFDESVNFLE-----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DS 409
           G  +++    E     D    + S +N  L+     GKF  A+ +L++M D+ I     S
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQS-YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +NI +  LC+   +  A  ++G M  + V PD  TY   + G C +   + A  + +++ 
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
             + + ++ + + L+  L ++ +I+EA E+   M++ G  L + + NI++ GLC   ++D
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483

Query: 530 KAIRL-------RSLAYSS-GTSYTT---------------STYTKIMLGLVKLQRAKDL 566
           KAI +        S A  + G SY                  TY+ ++ GL K  R  + 
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             + A+M+ E    D  AY I I    +Q K+         M K G     ET  SL+ G
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L   +Q+  +   ++++       +   YN  I  L +      A+ LLD M+ K   P+
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663

Query: 687 ATTHGLLV 694
             +   L+
Sbjct: 664 VFSFKYLI 671



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 142/613 (23%), Positives = 261/613 (42%), Gaps = 75/613 (12%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV  +      +  + +L  M S G   +  ++N ++ +   E R   D   + ++M + 
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN-DDSEKMVEKMREE 246

Query: 197 GIVPNVDTLNYLLEVLFETNRIESA--------LDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           G+VP++ T N  +  L +  ++  A        LD++  + +    PNS T+ +++KG  
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR----PNSITYNLMLKGFC 302

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               ++D+ ++   + +      L  Y   +  L R  K  EA  + K M    + P   
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           +Y  L++ LC+   L DA  I+  M   G+ P    +  ++ G C VGK D + + L++ 
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
                 P+    N LL      G+   A+ +L KM ++    D  + NI +  LC + E+
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482

Query: 424 RKAYELLGRMVV-----------------------SSVVPDCATYSAFVLGKCKLCNYED 460
            KA E++  M V                       ++ +PD  TYS  + G CK   + +
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +F ++  + L  DS++Y+  +   C+  KI+ A  V   M K GC  S  ++N LI 
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GL +  ++ +   L       G S    TY   +  L + ++ +D   +L +M+ +  A 
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662

Query: 581 DVEAYCILIQS--------MSEQ----------NKLKDCALFFNVMVKAG---------- 612
           +V ++  LI++        M+++           K    +L FN ++ AG          
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722

Query: 613 LVPDRETMLS------LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            V DR   L       L+  L    +L + S  ++K++      D +    +I+GL K G
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782

Query: 667 LTSQASYLLDLML 679
              +A+   D M+
Sbjct: 783 NKKEANSFADKMM 795



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/437 (21%), Positives = 193/437 (44%), Gaps = 36/437 (8%)

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL--DLMPDELTYEELINCLCENLRLDDA 326
           + +LS    ++ +  + N +++A   F+++R+   +  P    Y  L+    +  R++  
Sbjct: 72  KTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFV 131

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
           + + +DM++ G+ P    F  ++R LC+    D +    ++           + E  C  
Sbjct: 132 SWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDE-----------MPEKGCKP 180

Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
            +F                   ++ I +R  C+     K  ELL  M    V+P+   Y+
Sbjct: 181 NEF-------------------TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYN 221

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             V   C+    +D+ ++  ++  + LV D ++++  +  LC+  K+ +A  +F  M  +
Sbjct: 222 TIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281

Query: 507 ---GCSLSSS-SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
              G    +S ++N+++ G C +  ++ A  L      +    +  +Y   + GLV+  +
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             +   VL QM  +G    + +Y IL+  + +   L D      +M + G+ PD  T   
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGC 401

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           LLHG     ++    S + +++ ++ + ++   NIL++ LWK G  S+A  LL  M  KG
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461

Query: 683 WVPDATTHGLLVGSSVG 699
           +  D  T  ++V    G
Sbjct: 462 YGLDTVTCNIIVDGLCG 478


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/651 (24%), Positives = 290/651 (44%), Gaps = 52/651 (7%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           + L+  L    D  +AL++      +  F    + Y ++I KLG  G ++ M+ L   M 
Sbjct: 42  EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101

Query: 124 KERYPNVREALISLVFSFVNHYR----VNGAMRVLVNMNSGGFKLSVD--VFNVVLGAIV 177
           +E +    +  + +V SF++ Y      + A+ +++N     F +  D  V+N +L  +V
Sbjct: 102 REGH----QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLV 157

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           E  +       VY EM   GI P+V T N L++ L   +++ +A+     M  +G  P+ 
Sbjct: 158 EGSK-MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 216

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLG---------------------------IQL 270
            TF  +++G +    ++ ++ +   M ++G                           IQ 
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 271 ELS--------FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           E++         Y   +  LC+ + +  A+++  +M      PD  TY  ++NCLC+N +
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NA 378
           L++A  IL  M+  G  P    F  ++  LC   + +E+++          SP     N 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 379 LLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C  G   LA  + E+M +     D  ++N  I  LC   ++ KA +LL  M  + 
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
                 TY+  + G CK    E+A  VF Q+  Q +  ++I+++ L++GLC+ +KI +A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E+   M   G   ++ ++N ++   C    + KA  +     ++G      TY  ++ GL
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K  R +  L VL  M ++G     +AY  ++QS+  +N ++D    F  M + G  PD 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 618 ETMLSLLHGL-ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
            T   +  GL   G  +      + ++V    + + S + +L  GL   G+
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 211/448 (47%), Gaps = 7/448 (1%)

Query: 254 DDSVS-ILGEMFDL-GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           DD+V  IL ++  L GIQ +   Y  ++ +L   +K++    ++  M A  + PD +T+ 
Sbjct: 126 DDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFN 185

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLED 367
            L+  LC   ++  A  +LE+M   G+ P +  F  +++G  E G  + ++      LE 
Sbjct: 186 TLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 245

Query: 368 KCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
            C       N L+   C  G+   A   I +++AD    D  ++N  +  LC+N+ +  A
Sbjct: 246 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +++  MV     PD  TY+  V   CK    E+A  +  Q+  +  + D  +++ L+  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC   ++ EA+++   ++  G S    +FNILI  LC +     A+RL     +SG +  
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++  L  L +    L +L  M   GC      Y  +I  + ++ ++++    F+
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   G+  +  T  +L+ GL    ++      IN+++S+    ++  YN ++    K+G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +A+ +L+ M   G+  D  T+G L+
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLI 573



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 5/246 (2%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D++ Y+ L+  L +  K+     V+  M   G      +FN L+  LC   +V  A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               S G +   +T+T +M G V+    +  L V A+ML  GC+       +LI    + 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            +++D   +    +  G  PD+ T  + ++GL     +      ++ +V +    D   Y
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFD 710
           NI++N L K G   +A  +L+ M+ +G +PD TT   L+     G+ + E +D  R    
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 711 SSSFPD 716
               PD
Sbjct: 385 KGVSPD 390


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 181/743 (24%), Positives = 312/743 (41%), Gaps = 90/743 (12%)

Query: 27  LSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLI-RVLDNTNDLSSALKIFKW 85
           +S  ++ P +S +   +  Q T   ++I      LS +H+I  +L + ND  SAL+ FK 
Sbjct: 64  ISPESSFPGNSSSPYPRYSQDTVPTSQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKR 123

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
              Q+ F    D YC +   L +     E  G  + ++  RY +       +VF  V+H 
Sbjct: 124 AETQRGFIRGVDAYCVL---LHILMRSPETHGHARKLLN-RYVSGDSDPSPVVF--VDHL 177

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
            +N A R         F+L   VFN +L A +   R   + +  +  M+   ++P V  +
Sbjct: 178 -INCAKRF-------DFELDHRVFNYLLNAYIRANR-IENAIDCFNAMICQDVIPWVPYM 228

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N LL  L   N I    D + +M  +G   +  T  ++++  +   RV+++     E  +
Sbjct: 229 NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKE 288

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G++L+   Y+ II  +C++      + L + M+    +P E T+  +I        + +
Sbjct: 289 RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE 348

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLE 381
           A  + E+MI  G      V   +++G C  G  D ++N      ED        ++ L+E
Sbjct: 349 ALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIE 408

Query: 382 CCCNAGKFFLAKCILEKM-----------------------------------ADRKIAD 406
            CCN+G    A  +  +M                                    D  +A+
Sbjct: 409 GCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVAN 468

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++NI + WLC+  ++ +A  LL  MV   +VP+  +Y+  +LG C+  N + A  VF 
Sbjct: 469 IFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFS 528

Query: 467 QVSAQSLVLDSISYSKLVEG-----------------------------------LCQVE 491
            + A+ L  + ++YS L++G                                   LC+V 
Sbjct: 529 DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVG 588

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +++EA +      + G   S  ++N ++ G      +D A+ +       G S    TYT
Sbjct: 589 QMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYT 648

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K  R    L    +M  +G  LDV AY  LI    ++  ++     F  +++ 
Sbjct: 649 SLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV 708

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           GL P+R    S++ G  D + +        K+++D    D   Y  LI+GL KEG    A
Sbjct: 709 GLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 768

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
           S L   ML KG VPD  T  +LV
Sbjct: 769 SDLYMEMLSKGIVPDIITFHVLV 791



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 276/604 (45%), Gaps = 12/604 (1%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G VEE E   +   KER   +     S++   V      N  + +L  M   G+  S   
Sbjct: 274 GRVEEAEEYFRE-TKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 332

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  V+ A V +     + + + +EM+  G   N+     L++       ++SAL+ F ++
Sbjct: 333 FTSVIVACVAQG-NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G  PN  T+ ++I+G   +  ++ +  +  +M   GI   +     ++    +    
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451

Query: 289 EEAIRLFKMMRALDL-MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           EEA +LF    A+D  + +  TY  +++ LC+  ++D+A  +L++M+  G+ P    + D
Sbjct: 452 EEASKLFD--EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 509

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C  G  D + +   D       P    ++ L++     G    A  + ++M    
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569

Query: 404 IADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           IA  D ++N  I  LC+  ++ +A + L   +    +P C TY++ V G  K  N + AL
Sbjct: 570 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 629

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            V+R++    +  + ++Y+ L+ G C+  +I  A++    M + G  L  ++++ LI G 
Sbjct: 630 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 689

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C  R ++ A  L       G S     Y  ++ G   L   +  LV   +M+ +    D+
Sbjct: 690 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 749

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LI  + ++ +L   +  +  M+  G+VPD  T   L++GL +  QL      + +
Sbjct: 750 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEE 809

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEE 701
           +   +      +YN LI G ++EG   +A  L D ML +G VPD  T+ +L+ G   G+ 
Sbjct: 810 MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869

Query: 702 IDSR 705
             SR
Sbjct: 870 SLSR 873


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 162/680 (23%), Positives = 300/680 (44%), Gaps = 51/680 (7%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE-MEGLCQNM 122
           + L+  L    D  +AL++      ++ F    + Y ++I KLG A    + M+ L   M
Sbjct: 45  EELLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEM 104

Query: 123 VKERYPNVREALISLVFSFVNHYRVN----GAMRVLVNMNSGGFKLSVD--VFNVVLGAI 176
            +E +    +  + +V SF+  Y        A+ +++N     F +  D  V+N +L  +
Sbjct: 105 RREGH----QVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVL 160

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
           VE  +       VY EM + GI P+V T N L++ L   +++ +A+     M   G  P+
Sbjct: 161 VEGSK-MKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPD 219

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
             TF  +++G +    +  ++ +   M ++G          +I   C+  ++E+A+   +
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQ 279

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
              A    PD++TY   +N LC+N  +  A  +++ M+  G  P  DVF           
Sbjct: 280 QEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP--DVFT---------- 327

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIR 415
                              +N ++ C C  G+   AK IL +M +R  + D  ++N  I 
Sbjct: 328 -------------------YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC    + +A +L  ++ +  + PD  T++  +   CK+ + + ALR+F ++ +     
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++Y+ L++ LC + K+ +A+++   M   GC  S+ ++N +I GLC   ++++A  + 
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G S    T+  ++ GL K +R  D   +++QM+ EG   +   Y  ++    +Q
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQ 548

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             +K  A     M   G   D  T  +L++GL    +  +    +  +           Y
Sbjct: 549 GDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAY 608

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV------GSSVGEEIDSRRFAF 709
           N +I  L++   T  A  L   M   G  PDA T+ ++       G S+ E  D      
Sbjct: 609 NPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV 668

Query: 710 DSSSFPD-SVSDILAEGLGN 728
           D    P+ S   +LAEGL N
Sbjct: 669 DKGFIPEFSSFRMLAEGLLN 688



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 245/541 (45%), Gaps = 7/541 (1%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           V   M   G K  V  FN ++ A+    +     V + +EM  +G+ P+  T   L++  
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQ-VRTAVLMLEEMSSSGVAPDETTFTTLMQGF 230

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            E   I++AL    RM + GC P   T  ++I G     RV+D++  + +    G + + 
Sbjct: 231 VEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQ 290

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y   +  LC+   +  A+++  +M      PD  TY  ++NCLC+N +L++A  IL  
Sbjct: 291 ITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGK 388
           M+  G  P    F  ++  LC   + +E+++          SP     N L+   C  G 
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410

Query: 389 FFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             LA  + E+M       D  ++N  I  LC   ++ KA +LL  M  +       TY+ 
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK    E+A  VF Q+  Q +  ++I+++ L++GLC+ ++I +A ++   M   G
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              ++ ++N ++   C    + KA  +     ++G      TY  ++ GL K  R +  L
Sbjct: 531 LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVAL 590

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L  M ++G     +AY  +IQS+  +N  +D    F  M + G  PD  T   +  GL
Sbjct: 591 KLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGL 650

Query: 628 -ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
              G  +      + ++V    + + S + +L  GL   G+       +++++ K  + D
Sbjct: 651 CRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGD 710

Query: 687 A 687
           +
Sbjct: 711 S 711



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 12/314 (3%)

Query: 61  LSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVE 113
           LSPD      LI  L    D   AL++F+ +   K    T D  TY  +I  L   G + 
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEM---KSSGCTPDEVTYNTLIDNLCSLGKLG 447

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
           +   L + M     P       +++       R+  A  V   M+  G   +   FN ++
Sbjct: 448 KALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 507

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
             + ++KR   D   +  +M+  G+ PN  T N +L    +   I+ A D  + M   G 
Sbjct: 508 DGLCKDKR-IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGF 566

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
             +  T+  +I GL    R   ++ +L  M   G++     Y  +I  L R N   +A+ 
Sbjct: 567 EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMN 626

Query: 294 LFKMMRALDLMPDELTYEELINCLCE-NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           LF+ M  +   PD  TY+ +   LC     + +A D L +M+  G  P    F  +  GL
Sbjct: 627 LFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGL 686

Query: 353 CEVGKFDESVNFLE 366
             +G  D  +  +E
Sbjct: 687 LNLGMDDYFIRAIE 700


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 146/590 (24%), Positives = 264/590 (44%), Gaps = 55/590 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  ++      G +++ +     M  K   PNV    I L+       R   A+R    
Sbjct: 11  TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSI-LIDGLCKAKRSIDALRCFRA 69

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G      ++  +L  + +EKR     + +  EM   G  PNV T N L++ L + N
Sbjct: 70  MQGSGIVADTVIYTALLSGLWKEKR-LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ------- 269
             + A + F  M    C P+  T+  ++ GL    +++ ++++  EM D           
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y+ +I  LC+ N++ +A+ L + M+A    PD +TY  L++ LC+  ++  A ++
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           L +M+  G  P    +  ++ GLC   +  +++  + D      +P    +  L++  C 
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G+   A  +L  M D+    D   +N+ I  LC+ +++ ++  LL R V   + PD  T
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YS+ + G C+    ++A R+   V ++    D I YS L++GLC+  K+ EA +++  M+
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 505 KNGCSL-----------------------------------SSSSFNILIYGLCVMRKVD 529
            +GC                                     S+ ++N LI GLC +  +D
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ-----MLVEGCALDVEA 584
           +AI L      S  + +  TY  ++ G+ +++R    +V+L Q     +   G ALD  A
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           Y  LI  + +  ++ +   +F  M+  G++PD  T   LL GL     LH
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 598



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 260/576 (45%), Gaps = 18/576 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F     ++ A R    M S     +V + ++++  + + KR   D +  ++ M  
Sbjct: 14  ALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSI-DALRCFRAMQG 72

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +GIV +      LL  L++  R++ AL     M   GC PN  T+  +I GL  N+  D 
Sbjct: 73  SGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDR 132

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM---RALDL----MPDEL 308
           +  +   M  +     +  Y  ++  L R  KLE A+ LF+ M   R+ D+     P+ +
Sbjct: 133 AQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVI 192

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI+ LC+  R+  A ++LE M   G +P    +  +V GLC+  K   +   L + 
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEI 423
                 P    +N+LL   C A +   A  ++  M  R    +  ++   I  LC+   +
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           + A  +L  M+     PD   Y+  + G CK    ++++ + R+  +  +  D ++YS +
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC+  ++ EA  +   +   GC      ++ LI GLC   KVD+A  L  +    G 
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TY+ ++ GL K  R  +  ++LA+M+  G       Y  LI+ + + N L +   
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492

Query: 604 FFNVMVKAGLVPDRETMLSLLHGL-----ADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
               M ++   P   T   L+HG+      D + + L  +    + +    LD+  Y+ L
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSL 552

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           I+GL K G  ++A      M+  G +PD  T+ +L+
Sbjct: 553 IDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 237/518 (45%), Gaps = 13/518 (2%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V T   LL        I+ A   F  M  K   PN     I+I GL    R  D++  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
              M   GI  +   YT ++  L +E +L++A+ +   MR     P+ +TY  LI+ LC+
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF-----------LEDK 368
           N   D A ++ E M  +  +P+   +  ++ GL   GK + ++             ++D+
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAY 427
           C      ++ L++  C A +   A  +LE M  R  + D  ++ I +  LC+  ++  A+
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           E+L  M+ +  VP+  TY++ + G C+     DAL + R ++ +    + ++Y  L++GL
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+V ++ +A  +   M   G +     +N+LI GLC   +VD++I L   A S G     
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY+ ++ GL +  R  +   +L  +   GC  DV  Y  LI  + +  K+ +    + V
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M   G   D  T  +L+ GL    ++      + ++V       +  YN LI GL     
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDS 704
             +A  L++ M      P A T+ +L+ G    E +DS
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDS 524



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 247/560 (44%), Gaps = 23/560 (4%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           + EM    +VPNV   + L++ L +  R   AL  FR M   G   ++  +  ++ GL  
Sbjct: 32  FDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWK 91

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             R+D +++IL EM D G +  +  Y  +I  LC+ N+ + A  LF+ M++++  P  +T
Sbjct: 92  EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVT 151

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDD-------VFVDIVRGLCEVGKFDESV 362
           Y  L++ L    +L+ A  + ++M+       DD        +  ++ GLC+  +  ++V
Sbjct: 152 YNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAV 211

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
             LE       SP    +  L++  C   K   A  +L +M D   + +  ++N  +  L
Sbjct: 212 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 271

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C    +  A  L+  M      P+  TY   + G CK+   +DA  +   +  +    D 
Sbjct: 272 CRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDL 331

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           + Y+ L+ GLC+ +++ E++ +       G      +++ +IYGLC   ++D+A RL   
Sbjct: 332 MIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLY 391

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S G       Y+ ++ GL K  +  +   +   M  +GC  DV  Y  LI  + +  +
Sbjct: 392 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGR 451

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           + +  L    MV+ G  P   T  SL+ GL D + L      + ++   +    +  YNI
Sbjct: 452 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 511

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATT----------HGLLVGSSVGEEIDSRRF 707
           LI+G+ +      A  LL+    +      T            GL     V E +D  + 
Sbjct: 512 LIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQE 571

Query: 708 AFDSSSFPDSVS-DILAEGL 726
             D+   PD ++  IL EGL
Sbjct: 572 MIDNGVIPDHITYSILLEGL 591



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 240/511 (46%), Gaps = 54/511 (10%)

Query: 89  QKRFQHTAD--------TYCKMILKLGLAGNVEEMEGLCQNMVKERY--------PNVRE 132
           Q+ F+H           TY  ++  L   G +E    L Q M+  R         PNV  
Sbjct: 134 QELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVIT 193

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
             + L+       RV+ A+ +L +M + G    V  + +++  + +E +  A +  V +E
Sbjct: 194 YSV-LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE-VLRE 251

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+ AG VPN+ T N LL  L    R+  AL   R M  +GC PN  T+  +I GL    R
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V D+ ++L +M D G   +L  Y  +I  LC+ ++++E+I L +   +  + PD +TY  
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +I  LC + RLD+A  +L  +   G  P   ++  ++ GLC+ GK DE+ +  E   G  
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG-- 429

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                                       D   AD  +++  I  LC+   + +A+ LL R
Sbjct: 430 ----------------------------DGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           MV     P   TY++ + G C L + ++A+ +  ++   +    +++Y+ L+ G+C++E+
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521

Query: 493 ITEAVEVF-----CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           +  AV +       C++  G +L + +++ LI GLC   +V +A+        +G     
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581

Query: 548 STYTKIMLGLVKLQRAKDLL-VVLAQMLVEG 577
            TY+ ++ GL K +   +L  +VL QM+  G
Sbjct: 582 ITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 266/568 (46%), Gaps = 22/568 (3%)

Query: 169 FNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           F VV+  +  EKR   D  F V +  V+AG  P+  T N  ++ L +  R++ A    ++
Sbjct: 44  FTVVINGLCREKR--LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKK 101

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +K C P + T+  ++ GL+   R+D++++IL +M + G    L  YT +I  L +  +
Sbjct: 102 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGR 161

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA----NDILEDMIVIGLTPTDD 343
           +EEA R+F  M      PD   Y  LI+ L +  +LD+A    N ++E+    G+ P   
Sbjct: 162 VEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVV 221

Query: 344 VFVDIVRGLCEVGKFDESVNF---LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
           +   ++R LC  G  ++++ +   L+D         N L+   C A +   A   ++KM+
Sbjct: 222 IHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMS 281

Query: 401 DRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           +R+      ++   +    +   + +A   L   V    +PD  TY++ + G CKL   E
Sbjct: 282 ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVE 341

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +    F ++  +    D+++Y+ L++G  + + I +A  V+  M ++G  +S+ ++NI++
Sbjct: 342 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIIL 401

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GLC   +V +A          G   T  TY+ +M G          + +  +ML  GC 
Sbjct: 402 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 461

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            ++ +Y I+I+ +    KL     +F  +++  L PD  T  S LHGL    +L  V  G
Sbjct: 462 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC--QRLDTVGDG 519

Query: 640 I---NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL--- 693
           +     +VS     +   Y+IL++G+ + G       +   M+ +G  PD      L   
Sbjct: 520 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRW 579

Query: 694 --VGSSVGEEIDSRRFAFDSSSFPDSVS 719
             +   V E ++  R   +  S PD+ S
Sbjct: 580 LCIAGRVDEALEVFR-ELERRSAPDAWS 606



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 138/576 (23%), Positives = 252/576 (43%), Gaps = 56/576 (9%)

Query: 55  QSLRHNLSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           +++R    PD++     I  L     +  A ++ K +  +K+   T  TY  ++  L  A
Sbjct: 66  RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD-EKKCLPTTVTYTALVDGLLKA 124

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G ++E   + + MV++      +    ++       RV  A R+ V+M   G +    V+
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 170 NVVLGAIVEEKRGFADFVFVY-KEMVKAGIVPNVD------------------------- 203
             ++  +   K G  D   VY  +MV+ G    V+                         
Sbjct: 185 TALISGLA--KIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 204 -------------TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
                        T N L+  L +  R E A+   ++M ++ C P   T+  ++ G +  
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R+D+++  L E  + G   +   YT II  LC+  ++EE    F  MR     PD +TY
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES-VNFL---E 366
             LI+   +   +  A+ +   M+  G   +   +  I+ GLC+ G+  E+   FL   E
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 422

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
             C      ++AL++  C+ G    A  +  +M DR    +  S+NI IR LC   ++ K
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 482

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKC-KLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           AY    +++   + PD  T+++F+ G C +L    D + +F  + +Q    +  SYS L+
Sbjct: 483 AYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILM 542

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGT 543
           +G+C+   +   +E+F  M   G +     FN LI  LC+  +VD+A+ + R L   S  
Sbjct: 543 DGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAP 602

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
                +Y  ++  L + +R ++  ++   M ++GCA
Sbjct: 603 D--AWSYWSLLDALSRCERMEEARLLSFHMKLQGCA 636



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 13/330 (3%)

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
           M DRK+ D       +  LC+  ++ +A  LL  M  S   PD   ++  + G C+    
Sbjct: 1   MIDRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRL 57

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ++A  V  +        D ++Y+  ++GLC+ E++ +A ++   M +  C  ++ ++  L
Sbjct: 58  DEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 117

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           + GL    ++D+A+ +       G S T  TYT ++ GL K  R ++   +   ML  GC
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVK----AGLVPDRETMLSLLHGLADGSQLH 634
             D   Y  LI  +++  KL +  ++ N MV+     G+ PD      ++  L     L 
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH---- 690
              +  ++L  DS  L    +N L+  L K   T +A   +  M  +   P   T+    
Sbjct: 238 DALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLV 296

Query: 691 -GLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            G L    + E +   + A +    PD+V+
Sbjct: 297 DGFLKLGRLDEALLQLKEAVERGFIPDAVT 326


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 181/742 (24%), Positives = 311/742 (41%), Gaps = 90/742 (12%)

Query: 28  SCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLI-RVLDNTNDLSSALKIFKWV 86
           S  ++ P +S +   +  Q T   ++I      LS +H+I  +L + ND  SAL+ FK  
Sbjct: 25  SFESSFPGNSSSPYPRYSQDTVPTSQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRA 84

Query: 87  SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYR 146
             Q+ F    D YC +   L +     E  G  + ++  RY +       +VF  V+H  
Sbjct: 85  ETQRGFIRGVDAYCVL---LHILMRSPETHGHARKLLN-RYVSGDSDPSPVVF--VDHL- 137

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           +N A R         F+L   VFN +L A +   R   + +  +  M+   ++P V  +N
Sbjct: 138 INCAKRF-------DFELDHRVFNYLLNAYIRANR-IENAIDCFNAMICQDVIPWVPYMN 189

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LL  L   N I    D + +M  +G   +  T  ++++  +   RV+++     E  + 
Sbjct: 190 ILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKER 249

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++L+   Y+ II  +C++      + L + M+    +P E T+  +I        + +A
Sbjct: 250 GVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEA 309

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLEC 382
             + E+MI  G      V   +++G C  G  D ++N      ED        ++ L+E 
Sbjct: 310 LRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEG 369

Query: 383 CCNAGKFFLAKCILEKM-----------------------------------ADRKIADC 407
           CCN+G    A  +  +M                                    D  +A+ 
Sbjct: 370 CCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANI 429

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++NI + WLC+  ++ +A  LL  MV   +VP+  +Y+  +LG C+  N + A  VF  
Sbjct: 430 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 489

Query: 468 VSAQSLVLDSISYSKLVEG-----------------------------------LCQVEK 492
           + A+ L  + ++YS L++G                                   LC+V +
Sbjct: 490 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 549

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           ++EA +      + G   S  ++N ++ G      +D A+ +       G S    TYT 
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 609

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K  R    L    +M  +G  LDV AY  LI    ++  ++     F  +++ G
Sbjct: 610 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 669

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L P+R    S++ G  D + +        K+++D    D   Y  LI+GL KEG    AS
Sbjct: 670 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFAS 729

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            L   ML KG VPD  T  +LV
Sbjct: 730 DLYMEMLSKGIVPDIITFHVLV 751



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 276/604 (45%), Gaps = 12/604 (1%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G VEE E   +   KER   +     S++   V      N  + +L  M   G+  S   
Sbjct: 234 GRVEEAEEYFRE-TKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 292

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  V+ A V +     + + + +EM+  G   N+     L++       ++SAL+ F ++
Sbjct: 293 FTSVIVACVAQGN-MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G  PN  T+ ++I+G   +  ++ +  +  +M   GI   +     ++    +    
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411

Query: 289 EEAIRLFKMMRALDL-MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           EEA +LF    A+D  + +  TY  +++ LC+  ++D+A  +L++M+  G+ P    + D
Sbjct: 412 EEASKLFD--EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 469

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C  G  D + +   D       P    ++ L++     G    A  + ++M    
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529

Query: 404 IADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           IA  D ++N  I  LC+  ++ +A + L   +    +P C TY++ V G  K  N + AL
Sbjct: 530 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 589

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            V+R++    +  + ++Y+ L+ G C+  +I  A++    M + G  L  ++++ LI G 
Sbjct: 590 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 649

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C  R ++ A  L       G S     Y  ++ G   L   +  LV   +M+ +    D+
Sbjct: 650 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 709

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LI  + ++ +L   +  +  M+  G+VPD  T   L++GL +  QL      + +
Sbjct: 710 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEE 769

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEE 701
           +   +      +YN LI G ++EG   +A  L D ML +G VPD  T+ +L+ G   G+ 
Sbjct: 770 MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829

Query: 702 IDSR 705
             SR
Sbjct: 830 SLSR 833


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 240/467 (51%), Gaps = 7/467 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           + +AL ++  ++I   F+ T  TY  +I  L     V++   L + M             
Sbjct: 81  IENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYN 140

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MV 194
           +LV + +   R   A  +L  M + G    +  F +++  + +E    A F  V +  M+
Sbjct: 141 TLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMI 200

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           ++G+ P+V T N +L+ L +  RI  A + F+R  ++GC PN  T+  +I GL   +++D
Sbjct: 201 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 260

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +++ +L +M +LG +     Y+ ++  L +  ++E+A+ + + MR    +PD +TY  LI
Sbjct: 261 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 320

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +   +  RL +A  +L +M+  G  P+   +  +  GLC  G+FDE+V  L+       +
Sbjct: 321 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA 380

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYE 428
           P    ++++++  C AG+   A    EKMA  ++      +++  I  LC+  +I +AYE
Sbjct: 381 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYE 440

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
            L RM+ +  +PD  T+S  + G C     +  L +FR ++ +  V D ++Y+ LV+ LC
Sbjct: 441 FLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLC 500

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +  ++ EA ++F  M  +G S   S+   +I+GL  + + + A R++
Sbjct: 501 RASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQ 547



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 246/517 (47%), Gaps = 11/517 (2%)

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           Q + K  YP+V     +L+       RV  A  +     + G   +V  +N ++  + + 
Sbjct: 20  QMVDKAIYPDV-VTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKC 78

Query: 180 KRGFADFVFVYKEM-VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            R   + + +Y +M +  G  P V T + L++ L   + ++        M  +GC PN+ 
Sbjct: 79  GR-IENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAV 137

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  ++  L+   R  ++ S+L +M   G   EL  +  II  LC+E ++E A R+   M
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 197

Query: 299 RALD--LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
             ++  L PD +T+  +++ LC+  R+ DA+++ +  +  G  P    +  ++ GL ++ 
Sbjct: 198 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 257

Query: 357 KFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWN 411
           K DE++  L    E  C   T  ++ +++     G+   A  +L +M D   + D  ++N
Sbjct: 258 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 317

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I    + + +R+A  LL  M+ +   P   TY+    G C+   +++A+ +   ++A+
Sbjct: 318 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 377

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS-SFNILIYGLCVMRKVDK 530
               ++I+YS +V+GLC+  ++TEA+  F  M+++        +++ LI GLC   K+D+
Sbjct: 378 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDE 437

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A         +G      T++ ++ GL    R    L +   M   GC  D+  Y  L+ 
Sbjct: 438 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVD 497

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +   +++ +    F  M   GL PDR T  +++HGL
Sbjct: 498 RLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 236/510 (46%), Gaps = 30/510 (5%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++K+MV   I P+V T   L++ L +  R++ A D F     KGC P   T+  +I G
Sbjct: 15  ITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDG 74

Query: 247 LIANSRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           L    R+++++++  +M    G +  +  Y+ +I  LCR++++++  +L + M      P
Sbjct: 75  LCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAP 134

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + +TY  L+N L    R  +A  +LE M   G  P    F  I++GLC+ G+ + +   +
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRK 425
           ++                      F+ +  L         D  ++N  +  LC+ + I  
Sbjct: 195 DE---------------------MFMIESGLS-------PDVITFNSVLDGLCKEQRILD 226

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A+ +  R +     P+  TYS  + G  K+   ++AL++  ++       ++++YS +V+
Sbjct: 227 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 286

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GL +V ++ +AV V   M   GC   + ++N LI G    +++ +A+ L      +G   
Sbjct: 287 GLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 346

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           +  TYT +  GL +  R  + + +L  M   GCA +   Y  ++  + +  ++ +   +F
Sbjct: 347 SVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYF 406

Query: 606 NVMVKAGLV-PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
             M +  +V P      +L+ GL    ++      + +++    + D   ++ILINGL  
Sbjct: 407 EKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCD 466

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G       L   M  +G VPD  T+  LV
Sbjct: 467 AGRIDTGLELFRGMAERGCVPDMVTYATLV 496



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 222/491 (45%), Gaps = 69/491 (14%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GL  + +VD ++++  +M D  I  ++  Y  +I  L ++ +++EA  LF+  RA  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKFDES 361
             P  +TY  +I+ LC+  R+++A  + +DM +  G  PT   +  ++ GLC   + D+ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
              LE+  G   +P NA+                             ++N  +  L    
Sbjct: 121 CKLLEEMAGRGCAP-NAV-----------------------------TYNTLVNALLGQG 150

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS--AQSLVLDSIS 479
             ++A+ LL +M  +   P+  T+   + G CK    E A RV  ++      L  D I+
Sbjct: 151 RSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVIT 210

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           ++ +++GLC+ ++I +A  VF    + GC  +  +++ LI GL  M K+D+A++L +   
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G    T TY+ ++ GL+K+ R +D +VVL QM   GC  D   Y  LI    ++ +L+
Sbjct: 271 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 330

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL--------HLVSSG------------ 639
           +       M++AG  P   T  +L HGL    +         ++ + G            
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390

Query: 640 ---------------INKLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGW 683
                            K+  D  V    + Y+ LI+GL K G   +A   L+ M+  G 
Sbjct: 391 DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGR 450

Query: 684 VPDATTHGLLV 694
           +PD  T  +L+
Sbjct: 451 IPDVVTFSILI 461



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 3/234 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F    R+  A+ +L  M   GF  SV  +  +   +    R F + V +   M  
Sbjct: 318 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR-FDEAVEILDYMAA 376

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVD 254
            G  PN  T + +++ L +  R+  AL  F +M + +   P+   +  +I GL    ++D
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++   L  M   G   ++  ++ +I  LC   +++  + LF+ M     +PD +TY  L+
Sbjct: 437 EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLV 496

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           + LC   R+D+A D+ + M   GL+P       ++ GL EV + DE    ++D+
Sbjct: 497 DRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR-DEDAKRIQDE 549



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 2/238 (0%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
           A TY  +I        + E  GL + M++  +        +L        R + A+ +L 
Sbjct: 313 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 372

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFE 214
            M + G   +   ++ ++  + +  R   + +  +++M +  +V P+V   + L++ L +
Sbjct: 373 YMAARGCAPNAITYSSIVDGLCKAGR-VTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 431

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             +I+ A +   RM + G  P+  TF I+I GL    R+D  + +   M + G   ++  
Sbjct: 432 AGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVT 491

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           Y  ++  LCR ++++EA  LF+ MR+  L PD  T   +I+ L E  R +DA  I ++
Sbjct: 492 YATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 258/547 (47%), Gaps = 41/547 (7%)

Query: 189  VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            VY  M++  +VP+  T N L+    +    E A   F  M  K   P+  TF  +I GL 
Sbjct: 554  VYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 613

Query: 249  ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +V+ +  IL  M +LG+   +  Y  ++  LC+  ++EEA +  + M +   +PD +
Sbjct: 614  KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 673

Query: 309  TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            TY  L+  LC   R DDA  ++ ++   G  P    +  +V GL + G+ ++++  LE+ 
Sbjct: 674  TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733

Query: 369  CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK----IADCDSWNIPIRWLCEN 420
             G    P    +N L++  C AG    A+ +   M+ R     + +  ++++ I  LC+ 
Sbjct: 734  VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793

Query: 421  EEIRKAYELLGRMVVSS--VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL--D 476
              I +A EL+  M+  S  V+P+  TY++F+ G CK     +A  + R +   SL +  D
Sbjct: 794  GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPD 853

Query: 477  SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++++S L++GLC+  +  EA  VF  M   G   +  ++N+L+ GLC   K+++A  +  
Sbjct: 854  TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913

Query: 537  LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                 G +    TY+ ++    K     + L +L  M   GC  +V  +  +I  + + +
Sbjct: 914  SMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 973

Query: 597  KLKDCALFFNVM-VKAGLVPDRETMLSLLHGL---------------------------A 628
            +  +    F+ M +K GL PD+ T  +L+ GL                            
Sbjct: 974  QSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCI 1033

Query: 629  DG-SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
            +G S+L  VS  +++++    V D   +NILI G  K G   QAS L + M+ K   PD 
Sbjct: 1034 NGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 1093

Query: 688  TTHGLLV 694
             T G L+
Sbjct: 1094 MTFGALI 1100



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 169/684 (24%), Positives = 313/684 (45%), Gaps = 64/684 (9%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L  +N+L + +++F+ + +++       TY  +I  L  AG++EE   L  +M   
Sbjct: 222 IINGLCKSNELGAGMELFEEL-VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280

Query: 126 R-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
              PNV      + +S +    +NG  +V                    G I E +    
Sbjct: 281 SCVPNV------VTYSVL----INGLCKV--------------------GRIDEARE--- 307

Query: 185 DFVFVYKEMVKAG--IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTF 240
               + +EM +    ++PN+ T N  L+ L + +    A +  R +        P++ TF
Sbjct: 308 ----LIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 363

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I GL    ++D++ S+  +M   G    +  Y  ++  LC+ +K+E A  + + M  
Sbjct: 364 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 423

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + PD +TY  L++  C+  R+D+A ++L  M   G TP    F  I+ GLC+  +  E
Sbjct: 424 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGE 483

Query: 361 SVNFLED---KCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
           +    +D   K G V     +  L++     G+   A+ +L+ M D    D  ++N  I 
Sbjct: 484 AFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD---PDTYAFNCCIN 540

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            L +  ++ +A ++  RM+   +VPD  T++  + G CK  N+E A  +F ++ A++L  
Sbjct: 541 GLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 600

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D +++  L++GLC+  ++  A ++   M   G   +  ++N L++GLC   ++++A +  
Sbjct: 601 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               SSG    + TY  ++  L +  R  D L +++++   G   D   Y IL+  + + 
Sbjct: 661 EEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKS 720

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGL---ADGSQLHLVSSGINKLVSDSEVLDS 652
            + +        MV  G  PD  T  +L+  L    D  +   +   ++  VS   V + 
Sbjct: 721 GQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNV 780

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGW--VPDATTH-----GLLVGSSVGEEIDSR 705
             Y++LINGL K G   +A  L+  M+ K    +P+  T+     GL   S + E  +  
Sbjct: 781 VTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM 840

Query: 706 RFAFDSS--SFPDSVS-DILAEGL 726
           R   D S    PD+V+   L +GL
Sbjct: 841 RSLRDGSLRVSPDTVTFSTLIDGL 864



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 163/678 (24%), Positives = 301/678 (44%), Gaps = 52/678 (7%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L    DL  A ++   +S +    +   TY  +I  L   G ++E   L Q M ++
Sbjct: 257 LIDSLCKAGDLEEARRLHGDMSSRSCVPNVV-TYSVLINGLCKVGRIDEARELIQEMTRK 315

Query: 126 R---YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEK 180
                PN+     S +           A  ++ ++  G  ++S D   F+ ++  + +  
Sbjct: 316 SCDVLPNII-TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 374

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           +   +   V+ +M+  G VPNV T N L+  L + +++E A      M  KG  P+  T+
Sbjct: 375 Q-IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 433

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-MMR 299
            +++      SRVD+++ +L  M   G    +  +  II  LC+ ++  EA ++F  M  
Sbjct: 434 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMAL 493

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDM----------IVIGLTPTDDV----- 344
              L+PD++TY  LI+ L    R   A  +L+ M           + GL+   DV     
Sbjct: 494 KHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQ 553

Query: 345 ----------------FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCC 384
                           F  ++ G C+ G F+++    E+       P      AL++  C
Sbjct: 554 VYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 613

Query: 385 NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            AG+   A+ IL+ M +  +  +  ++N  +  LC++  I +A + L  MV S  VPD  
Sbjct: 614 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 673

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY + V   C+    +DAL++  ++ +     D+++Y+ LV+GL +  +  +A+ V   M
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR---SLAYSSGTSYTTSTYTKIMLGLVKL 560
              G      ++N LI  LC    +++A RL    S   S        TY+ ++ GL K+
Sbjct: 734 VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793

Query: 561 QRAKDLLVVLAQMLVEGCAL--DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL--VPD 616
            R  +   ++ +M+ + C +  ++  Y   +  + +Q+ + +       +    L   PD
Sbjct: 794 GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPD 853

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +L+ GL    Q     +  + +++   V +   YN+L+NGL K     +A  +++
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913

Query: 677 LMLGKGWVPDATTHGLLV 694
            M+ KG  PD  T+ +LV
Sbjct: 914 SMVDKGVTPDVITYSVLV 931



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 148/600 (24%), Positives = 250/600 (41%), Gaps = 56/600 (9%)

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKA--GIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           V  AI+ +  G A+    + +   A  G    + + N  L +L ++     A+D FR   
Sbjct: 79  VAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRL 138

Query: 230 KKGCCPNSRTFE----------------------------------IVIKGLIANSRVDD 255
              C PN  T+                                   IV++ L        
Sbjct: 139 PPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETAR 198

Query: 256 SVSIL-GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++ I  GEM   G+   +  Y  II  LC+ N+L   + LF+ +      PD +TY  LI
Sbjct: 199 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLI 258

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCG 370
           + LC+   L++A  +  DM      P    +  ++ GLC+VG+ DE+   +++     C 
Sbjct: 259 DSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 318

Query: 371 YVTS--PHNALLECCCNAGKFFLAKCILEKMAD---RKIADCDSWNIPIRWLCENEEIRK 425
            + +   +N+ L+  C       A  ++  + D   R   D  +++  I  LC+  +I +
Sbjct: 319 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 378

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +   M+    VP+  TY+A V G CK    E A  +   +  + +  D I+YS LV+
Sbjct: 379 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 438

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTS 544
             C+  ++ EA+E+   M+  GC+ +  +FN +I GLC   +  +A ++   +A   G  
Sbjct: 439 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLV 498

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL +  RA     +L  M       D  A+   I  +S+   +      
Sbjct: 499 PDKITYCTLIDGLFRTGRAGQAEALLDAMPDP----DTYAFNCCINGLSKLGDVSRALQV 554

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           +N M++  LVPD+ T   L+ G          S+   ++V+ +   D   +  LI+GL K
Sbjct: 555 YNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 614

Query: 665 EGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            G    A  +LDLM   G  P+  T     HGL     + E          S   PDS++
Sbjct: 615 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 674



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 139/582 (23%), Positives = 266/582 (45%), Gaps = 24/582 (4%)

Query: 67   IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KE 125
            I  L    D+S AL+++  + ++        T+  +I     AGN E+   L + MV K 
Sbjct: 539  INGLSKLGDVSRALQVYNRM-LELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 597

Query: 126  RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
              P+V     +L+       +V  A  +L  M + G   +V  +N ++  + +  R   +
Sbjct: 598  LQPDVM-TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR-IEE 655

Query: 186  FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
                 +EMV +G VP+  T   L+  L   +R + AL     +   G  P++ T+ I++ 
Sbjct: 656  ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715

Query: 246  GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD--- 302
            GL  + + + ++++L EM   G   ++  Y  +I  LC+   LEEA RL   M +     
Sbjct: 716  GLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRC 775

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMI--VIGLTPTDDVFVDIVRGLCEVGKFDE 360
             +P+ +TY  LIN LC+  R+D+A +++++M+     + P    +   + GLC+     E
Sbjct: 776  CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAE 835

Query: 361  SVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIP 413
            +   +        +    T   + L++  C  G+   A  + + M A   + +  ++N+ 
Sbjct: 836  ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVL 895

Query: 414  IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
            +  LC+ +++ +A+ ++  MV   V PD  TYS  V   CK  + ++AL +   ++++  
Sbjct: 896  MNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGC 955

Query: 474  VLDSISYSKLVEGLCQVEKITEAVEVFCCMS-KNGCSLSSSSFNILIYGLCVMRKVDKAI 532
              + ++++ +++GLC+ ++  EA ++F  M+ K+G +    ++  LI GL       +A 
Sbjct: 956  TPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA- 1014

Query: 533  RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
                +   +     T  +   + GL KL    D+   L +ML      D   + ILI   
Sbjct: 1015 ---EVLLDAMPDPDTYAFNCCINGLSKL---GDVSRALHRMLELELVPDKVTFNILIAGA 1068

Query: 593  SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             +    +  +  F  MV   L PD  T  +L+ GL    Q+ 
Sbjct: 1069 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 19/228 (8%)

Query: 115  MEGLCQNMVKERYPNVREALIS------------LVFSFVNHYRVNGAMRVLVNMNSGGF 162
            M GLC+    ER   + E+++             LV +F     V+ A+ +L  M S G 
Sbjct: 896  MNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGC 955

Query: 163  KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
              +V  FN ++  + +  +    F       +K G+ P+  T   L++ LF T     A 
Sbjct: 956  TPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAE 1015

Query: 223  DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
                 M      P++  F   I GL   S++ D    L  M +L +  +   +  +I   
Sbjct: 1016 VLLDAMPD----PDTYAFNCCINGL---SKLGDVSRALHRMLELELVPDKVTFNILIAGA 1068

Query: 283  CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
            C+    E+A  LF+ M A +L PD +T+  LI+ LC+  +++   DI+
Sbjct: 1069 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 266/555 (47%), Gaps = 12/555 (2%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           A  +LV  +  + R++ A R++ +M           +  ++  + +  R   D + +  +
Sbjct: 107 AYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGR-VGDALSLLDD 162

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++    P+V T   LLE + +++    A+     M  KGC PN  T+ ++I G+    R
Sbjct: 163 MLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDR 222

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+  IL  +   G Q +   YT ++  LC   + E+   LF  M   + +P+E+T++ 
Sbjct: 223 VDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDM 282

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+   C    ++ A ++L+ M   G T    +   ++  +C+ G+ D++  FL +   Y 
Sbjct: 283 LVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG 342

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
            SP    +  +L+  C AG++  AK +L +M  +     + ++N  I  LC+   I +A 
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L+ +M          TY+A V G C     + AL +F  +  +    ++I+Y+ L+ GL
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEP---NTITYTTLLTGL 459

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C  E++  A E+   M +N C L+  +FN+L+   C    V++AI L       G +   
Sbjct: 460 CHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNL 519

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            T+  ++ G+ +   +++ L +L  ++ +G +LD   Y  ++  +S ++++++    F+ 
Sbjct: 520 ITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHA 579

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   G+ P       +L  L    +          +VS+S + + S Y ILI GL +EGL
Sbjct: 580 VQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGL 639

Query: 668 TSQASYLLDLMLGKG 682
             +A Y+L  +  +G
Sbjct: 640 LKEARYVLSELCSRG 654



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 235/504 (46%), Gaps = 14/504 (2%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P++ T+  +I+GL    RV D++S+L +M     Q  +  YT ++  +C+ +   +A+++
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKV 194

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              MRA    P+ +TY  +IN +C   R+DDA  IL  +   G  P    +  +++GLC 
Sbjct: 195 LDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCA 254

Query: 355 VGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDS 409
             ++++        +E+ C       + L+   C  G    A  +L++M++    A+   
Sbjct: 255 AKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTL 314

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
            NI I  +C+   +  A+E L  M      PD  +Y+  + G C+   +EDA  +  ++ 
Sbjct: 315 CNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMV 374

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            ++   + ++++  +  LCQ   I +A+ +   M + GCS+   ++N L+ G CV  +VD
Sbjct: 375 RKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVD 434

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A+ L +   S      T TYT ++ GL   +R      +LA+M+   C L+V  + +L+
Sbjct: 435 SALELFN---SLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLV 491

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
               ++  +++       M++ G  P+  T  +LL G+ +          ++ LVS    
Sbjct: 492 SFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGIS 551

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-----SVGEEIDS 704
           LD+  Y+ +++ L +E    +A  +   +   G  P A  +  ++ +          ID 
Sbjct: 552 LDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDF 611

Query: 705 RRFAFDSSSFP-DSVSDILAEGLG 727
                 +S  P +S   IL EGL 
Sbjct: 612 FAHMVSNSCMPNESTYVILIEGLA 635



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 210/474 (44%), Gaps = 44/474 (9%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A ++L  ++S GF+     +  VL  +   KR + D   ++ EMV+   VPN  T 
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKR-WEDVEVLFCEMVENNCVPNEVTF 280

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L+        +E A++   RM + GC  N+    IVI  +    RVDD+   L  M  
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G   +   YT ++  LCR  + E+A  L   M   +  P+E+T+   I  LC+   +D 
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSPHNALLECCC 384
           A  ++E M   G +     +  +V G C  G+ D ++       C   T  +  LL   C
Sbjct: 401 AILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLC 460

Query: 385 NAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
           +A +   A  +L +M      DC     ++N+ + + C+   + +A EL+ +M+     P
Sbjct: 461 HAERLDAAAELLAEMMQN---DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTP 517

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++  + G  + CN E+AL +   + ++ + LD+I+YS +V+ L + ++I EAV++F
Sbjct: 518 NLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMF 577

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +   G    +  +N ++  LC   + D+AI                            
Sbjct: 578 HAVQDMGMRPKAVMYNKILSALCKRCETDRAIDF-------------------------- 611

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
                     A M+   C  +   Y ILI+ ++ +  LK+     + +   G++
Sbjct: 612 ---------FAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/491 (22%), Positives = 215/491 (43%), Gaps = 46/491 (9%)

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           ++ LIA   + ++  ++      G   ++   T +I  LCR  +  +A R+ +       
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             D   Y  L+   C   RLD A  ++  M V    P    +  ++RGLC+ G+  ++++
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 364 FLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
            L+D    +C      +  LLE  C +  F  A  +L++M  +    +  ++N+ I  +C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
             + +  A ++L R+      PD  +Y+  + G C    +ED   +F ++   + V + +
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           ++  LV   C+   +  A+EV   MS++GC+ +++  NI+I  +C   +VD A    +  
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQR---AKDLL---------------------------- 567
            S G S  T +YT ++ GL +  R   AK+LL                            
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398

Query: 568 ----VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
               +++ QM   GC++ +  Y  L+     Q ++      FN +      P+  T  +L
Sbjct: 399 DQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTL 455

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           L GL    +L   +  + +++ +   L+   +N+L++   ++G   +A  L+  M+  G 
Sbjct: 456 LTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGC 515

Query: 684 VPDATTHGLLV 694
            P+  T   L+
Sbjct: 516 TPNLITFNTLL 526



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 165/400 (41%), Gaps = 44/400 (11%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           FQ    +Y  ++  L  A   E++E L   MV+            LV  F     V  A+
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            VL  M+  G   +  + N+V+ +I ++ R    F F+   M   G  P+  +   +L+ 
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL-NNMGSYGCSPDTISYTTVLKG 356

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L    R E A +    M +K C PN  TF   I  L     +D ++ ++ +M + G  + 
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  Y  ++   C + +++ A+ LF    +L   P+ +TY  L+  LC   RLD A ++L 
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFN---SLPCEPNTITYTTLLTGLCHAERLDAAAELLA 473

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECC---C 384
           +M+          F  +V   C+ G  +E++  ++    +  +P+    N LL+     C
Sbjct: 474 EMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDC 533

Query: 385 NAGKFF------LAKCI-LEKMADRKIADCDS--------------------------WN 411
           N+ +        ++K I L+ +    I D  S                          +N
Sbjct: 534 NSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYN 593

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +  LC+  E  +A +    MV +S +P+ +TY   + G
Sbjct: 594 KILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEG 633


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 232/476 (48%), Gaps = 7/476 (1%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KG  P+  T+  +I GL    +V +++ ++ EM + G+  +++ YT I+  LCR  K
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++EA  LF  M       + + Y  LIN LC++  ++ A  +LE+M   G  P +  +  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM--AD 401
           I+ GLC +GK  E+  F +       SP    +N LL+     GK   A  + + M  AD
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           RK+A D  ++N  I   C  E+  +A +L   ++    +PD  TY++ +LG  +  N ++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +F+++       +  +YS ++ G C+V  +   +E++  M++   S      N +I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC  +KVD A ++       G      TY  ++ GL K         + + M+  GCA 
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ +Y +++  + + NK+ D  + F+ M++  LVPD  T   L+ GL    +L      +
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           + +   + + D      L++GL ++  T +A  L   M+ KG V D   H +++  
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 270/633 (42%), Gaps = 87/633 (13%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L  T  ++ AL++ + ++ +K       TY  ++ +L  AG V+E + L   M++ 
Sbjct: 16  IISGLCKTGKVTEALEMVEEMT-EKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIER 74

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEK 180
                  A  +L+        +  A ++L  M S G++     +N +L  +     V E 
Sbjct: 75  GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEA 134

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           + F D       M   G  P+V   N LL+ L++  ++  A   F+ M            
Sbjct: 135 KQFFD------SMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM------------ 176

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
                                +M D  +  +L  Y  +I   CR  K +EA++LFK + A
Sbjct: 177 ---------------------DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA 215

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
              MPD +TY  ++  L     +D+A ++ + M+  G  P    +  ++ G C VG    
Sbjct: 216 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMAR 275

Query: 361 SVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIR 415
            +   E+      SP     NA+++  C A K   A  +LE+M+    + D  ++NI + 
Sbjct: 276 CLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 335

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC+   + KA+EL   MV +   PD  +YS  + G CK     DA  +F ++  + LV 
Sbjct: 336 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 395

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++++ L++GLC+  K+ EA ++   MS++       +   L++GLC  ++ D+A+RL 
Sbjct: 396 DVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRL- 454

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                                                M+ +G   DV  + I++  +  +
Sbjct: 455 ----------------------------------FQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 596 NKLKDCALFFNVMVKAG--LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
            KL    LFF  MVK+     PD  T  +L++ L +  ++        ++       D  
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            YN L+NGL K+G   QA  L   M  KG++ D
Sbjct: 541 AYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 255/549 (46%), Gaps = 15/549 (2%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G  P+V T + ++  L +T ++  AL+    M +KG  P+  T+ I++  L    +
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VD++  +  +M + G       Y  +I  LC++  +E A +L + M +    PD +TY  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCG 370
           +++ LC   ++ +A    + M   G +P    +  ++  L + GK  E+    +  D   
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 371 YVTSP----HNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRK 425
              +P    +N L++  C   K   A K   + +A   + D  ++N  +  L     + +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A E+  +MV S   P+ ATYS  + G C++ N    L ++ +++ +    D +  + +++
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC+ +K+ +A +V   MSK G      ++NIL+ GLC    VDKA  L S    +G + 
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              +Y+ ++ GL K  +  D  V+  +M+      DV  + IL+  + +  KL +     
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           +VM +  ++PD  T  +L+HGL    +          +V    V D   +NI++ GL +E
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 666 GLTSQASYLLDLMLGKG--WVPDATTHGLLVGS-----SVGEEIDSRRFAFDSSSFPDSV 718
           G  +QA      M+     + PD  T+  LV +      V + +D  +    S   PD V
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540

Query: 719 S-DILAEGL 726
           + + L  GL
Sbjct: 541 AYNTLMNGL 549


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 226/481 (46%), Gaps = 39/481 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M   G  PNV T N L++ L + N  + A + F  M    C P+  T+  ++ GL    +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 253 VDDSVSILGEMFDL-------------------GIQLELSF--------------YTCII 279
           ++ ++++  EM D                     I+  L F              Y+ +I
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC+ N++ +A+ L + M+A    PD +TY  L++ LC+  ++  A ++L +M+  G  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           P    +  ++ GLC   +  +++  + D      +P    +  L++  C  G+   A  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 396 LEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L  M D+    D   +N+ I  LC+ +++ ++  LL R V   + PD  TYS+ + G C+
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               ++A R+   V ++    D I YS L++GLC+  K+ EA +++  M+ +GC     +
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           ++ LI GLC   +VD+A  L +     GT  +T TY  ++ GL  L    + + ++ +M 
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 420

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              CA     Y ILI  M    ++   AL +F  M+  G++PD  T   LL GL     L
Sbjct: 421 RSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480

Query: 634 H 634
           H
Sbjct: 481 H 481



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 229/477 (48%), Gaps = 16/477 (3%)

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D G +  +  Y  +I  LC+ N+ + A  LF+ M++++  P  +TY  L++ L    +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 323 LDDANDILEDMIVIGLTPTDDV--FVDIVRGLCEVGKFDESVNF---LEDKCGYVTSPHN 377
           L+ A  + ++M+      + DV  F  +V GLC  GK + ++ F   ++D+C      ++
Sbjct: 61  LERAMALFQEMLD---RRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYS 117

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            L++  C A +   A  +LE M  R  + D  ++ I +  LC+  ++  A+E+L  M+ +
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
             VP+  TY++ + G C+     DAL + R ++ +    + ++Y  L++GLC+V ++ +A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             +   M   G +     +N+LI GLC   +VD++I L   A S G      TY+ ++ G
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L +  R  +   +L  +   GC  DV  Y  LI  + +  K+ +    + VM   G   D
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +L+ GL    ++      + ++V       +  YN LI GL       +A  L++
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 677 LMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF-----DSSSFPDSVS-DILAEGL 726
            M      P A T+ +L+ G    E +DS    +     D+   PD ++  IL EGL
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 212/429 (49%), Gaps = 10/429 (2%)

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           T  L  A+ +F+   +  R  H   ++  ++  L  AG +E      + M     PNV  
Sbjct: 58  TGKLERAMALFQ--EMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVIT 115

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
             + L+       RV+ A+ +L +M + G    V  + +++  + +E +  A +  V +E
Sbjct: 116 YSV-LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE-VLRE 173

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+ AG VPN+ T N LL  L    R+  AL   R M  +GC PN  T+  +I GL    R
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V D+ ++L +M D G   +L  Y  +I  LC+ ++++E+I L +   +  + PD +TY  
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DK 368
           +I  LC + RLD+A  +L  +   G  P   ++  ++ GLC+ GK DE+ +  E    D 
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
           C      ++ L++  C AG+   A  +L +M          ++N  I+ LC+   + +A 
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 413

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED-ALRVFRQVSAQSLVLDSISYSKLVEG 486
           EL+  M  S+  P   TY+  + G C++   +  AL  F+++    ++ D I+YS L+EG
Sbjct: 414 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEG 473

Query: 487 LCQVEKITE 495
           L + + + E
Sbjct: 474 LKKSKDLHE 482


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 262/534 (49%), Gaps = 17/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +M+++  +P+V     L+ V+    R +  +  +++M +K    + 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG+  ++  +T ++  LC E+++ EA+ LF  
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQ 174

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL PT   +  IV G+C+ G 
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++N L   ++  ++      ++A+++  C  G+   A+ +  +M ++ I  D  ++N
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +     A +LL  M+   + PD  TY+A +    K   + +A  ++ ++  +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+YS +++G C+  ++  A  +F  M+  GCS +  +FN LI G C  +++D  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L      +G    T+TY  ++ G   +      L +L +M+  G   D+     L+  
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 592 MSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           + +  KLKD    F VM K+           G+ PD +T   L+ GL +  +        
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V D+  Y+ +I+GL K+    +A+ + D M  K + P+  T   L+
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 145/662 (21%), Positives = 279/662 (42%), Gaps = 66/662 (9%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMIL---KLGLAGNVEEMEGL------CQNMVKER-Y 127
           SA ++F   SI+      +   C+       L L     E++GL        +M++ R  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPL 76

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADF 186
           P+V +    L+   V   R +  + +   M     +  +  FN+++       K  FA  
Sbjct: 77  PSVVD-FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA-- 133

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +  + ++ K G+ P+V T   LL  L   +R+  AL+ F +M +  C PN  TF  ++ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMP 305
           L    R+ ++V++L  M + G+Q     Y  I+  +C++     A+ L + M  +  ++P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + + Y  +I+ LC++ R  DA ++  +M   G+ P    +  ++ G C  G++ ++   L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
           ++      SP    +NAL+      GKFF A+ + ++M  R I  +  +++  I   C+ 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             +  A  +   M      P+  T++  + G C     +D + +  +++   LV D+ +Y
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 481 SKLV-----------------------------------EGLCQVEKITEAVEVFCCMSK 505
           + L+                                   +GLC   K+ +A+E+F  M K
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 506 -----------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
                      NG      ++NILI GL    K  +A  L       G    T TY+ ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            +  T ++L+ G      ++       +++S     D+     ++ GLW +    +A  +
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 675 LD 676
           L+
Sbjct: 674 LE 675



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 231/534 (43%), Gaps = 19/534 (3%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           +P+V     +L+       RV+ A+ +   M     + +V  F  ++  +  E R   + 
Sbjct: 146 HPDVV-TFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR-IVEA 203

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIK 245
           V +   M++ G+ P   T   +++ + +     SAL+  R+M +     PN   +  +I 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L  + R  D+ ++  EM + GI  +L  Y  +I   C   +  +A +L + M    + P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +TY  LIN   +  +  +A ++ ++M+  G+ P    +  ++ G C+  + D + +  
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 366 EDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN 420
                   SP+    N L++  C A +      +L +M +   +AD  ++N  I      
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI-- 478
            ++  A +LL  M+ S + PD  T    + G C     +DAL +F+ +      LD+   
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 479 ---------SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                    +Y+ L+ GL    K  EA E++  M   G    + +++ +I GLC   ++D
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A ++     S   S    T+T ++ G  K  R  D L +  +M   G   +   Y  LI
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
               +   +      F  M+ +G+ PD  T+ ++L GL    +L    + + KL
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 83/174 (47%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ ++ AI L S    S    +   + K+M  +V+++R   ++ +  +M  +    
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ ++ ILI+     +KL      F  + K GL PD  T  +LLHGL    ++    +  
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   +   +   +  L+NGL +EG   +A  LLD M+  G  P   T+G +V
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 176/709 (24%), Positives = 315/709 (44%), Gaps = 60/709 (8%)

Query: 54  IQSLRHNLSPDHLIRVLDNTN-DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           I  L    S D +  VL N   + +++L  F++VS Q+ F+    +YCK++  L      
Sbjct: 25  ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMY 84

Query: 113 EEMEGLCQNMV-----KERYPNVREALISL----VFS----------FVNHYRVNGAMRV 153
           +E       +V     K+R   + + L+ +     FS          +V       A+ V
Sbjct: 85  DETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYV 144

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
             NM   G   S+   N +L  +V+         +VY++M++ GIVP+V  ++ ++    
Sbjct: 145 FDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH-YVYQQMIRVGIVPDVFMVSIMVNAFC 203

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +  +++ A    ++M   G  PN  T+  +I G ++   V+ +  +L  M + G+   + 
Sbjct: 204 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 263

Query: 274 FYTCIIPMLCRENKLEEAIRLFK-MMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
            YT +I   C++ K++EA ++ + M     L+PDE  Y  LI+  C   ++DDA  +L++
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           M+ +GL     +   ++ G C+ G+  E+   +     +   P    +N LL+  C  G 
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 389 FFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  + +KM    I     ++N  ++ LC       A ++   M+   V PD   YS 
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G  K+ N+E A  +++ + A+      I+++ ++ GLC++ K+ EA E+F  M   G
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           CS    ++  LI G C    V +A +++        S +   Y  ++ GL K +R  ++ 
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR---ETMLSLL 624
            +L +M + G   ++  Y  LI    ++  L      +  M + GL  +     TM+S L
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 623

Query: 625 H--GLADGSQL---HLVSSGINK-----LVSD---------SEVLDSS----------MY 655
           +  G  D + L    +V  G        L SD         ++ LD S          +Y
Sbjct: 624 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 683

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEID 703
           NI I GL K G    A     ++  KG+VPD  T+  L+ G S    +D
Sbjct: 684 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 732



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 217/509 (42%), Gaps = 32/509 (6%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G + E EG+   MV         +  +L+  +      + A  +   
Sbjct: 341 NGYCK-------RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 393

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G + +V  +N +L  +      F D + ++  M+K G+ P+    + LL+ LF+  
Sbjct: 394 MLQEGIEPTVLTYNTLLKGLCRVG-AFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 452

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E A   ++ +  +G   +  TF  +I GL    ++ ++  I  +M DLG   +   Y 
Sbjct: 453 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 512

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C+ + + +A ++   M    + P    Y  LI+ L ++ RL +  D+L +M + 
Sbjct: 513 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 572

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL----------LECCCNA 386
           GLTP    +  ++ G C+ G  D++ +       Y     N L          +      
Sbjct: 573 GLTPNIVTYGALIDGWCKEGMLDKAFS------SYFEMTENGLSANIIICSTMVSGLYRL 626

Query: 387 GKFFLAKCILEKMADRKI-ADCDSW-NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           G+   A  +++KM D     D + +    IR+      I+K  + L     + ++P+   
Sbjct: 627 GRIDEANLLMQKMVDHGFFPDHECFLKSDIRY----AAIQKIADSLDESCKTFLLPNNIV 682

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK    +DA R F  +S +  V D+ +Y  L+ G      + EA  +   M 
Sbjct: 683 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           + G   +  ++N LI GLC    VD+A RL    +  G      TY  ++ G  K+    
Sbjct: 743 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 802

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMS 593
               +  +M+ EG +  ++  C L++S+S
Sbjct: 803 AAFKLKDKMIEEGISPSIQ--CNLLESVS 829


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 169/675 (25%), Positives = 287/675 (42%), Gaps = 77/675 (11%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P H+  V+    +   AL+IF  V  +  F+HT  TY  MI KLG  G  E ME    
Sbjct: 5   LLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAME---- 60

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            ++ E   N+   L+  V+         GAMR       G  + +VDVF         E+
Sbjct: 61  EVLAETRMNIDNGLLEGVYI--------GAMRNY--GRKGKIQEAVDVF---------ER 101

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
             F +              P+V + N ++ +L E    + A   + RM  KG  P+  TF
Sbjct: 102 MDFFN------------CEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I +K     SR   +  +L  M   G +     Y  +I     EN   EA  LF+ M  
Sbjct: 150 TIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG 209

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           L + PD + + +LI+ LC    + ++  +L  ++  G++P        ++G C+    +E
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNE 269

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
           ++  L D  G   +P    +N L+   C   K   A+  L KM +     D  ++N  I 
Sbjct: 270 AIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C+   ++ A ++L        VPD +TY + + G C+  + + A+ VF +   + L  
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR--------- 526
           + +  + LV+GL Q   I +A+++   MS+NGCS    ++N++I GLC +          
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLV 448

Query: 527 --------------------------KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
                                     K+D AI +    ++ G S    TY  I+ GL K 
Sbjct: 449 IDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKA 508

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            + +D++     M+ +GC  ++  Y IL +S  +  K+++       M   GL PD    
Sbjct: 509 GKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDS-SMYNILINGLWKEGLTSQASYLLDLML 679
            +L+ G  D   L        ++    +   + + YNI+IN    +   + A  L + M 
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628

Query: 680 GKGWVPDATTHGLLV 694
             G+ PD+ T+ +++
Sbjct: 629 ENGFSPDSYTYRVMI 643



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 250/591 (42%), Gaps = 63/591 (10%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
           SF    R + A R+L NM S G + S   +  V+G   EE         +++EM+  GI 
Sbjct: 155 SFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHE-LFEEMLGLGIC 213

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P++   N L+  L     ++ +     ++ K+G  PN  T  I I+G    + +++++ +
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL 273

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L +    G+  ++  Y  +I  LC+  K+ EA    + M      PD  TY  +I+  C+
Sbjct: 274 L-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK 332

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-------------- 365
              + +A+ IL D    G  P +  +  ++ GLC+ G  D ++N                
Sbjct: 333 LGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVL 392

Query: 366 -------------------------EDKCGYVTSPHNALLECCCNAGKFFLA-KCILEKM 399
                                    E+ C      +N ++   C  G    A   +++ +
Sbjct: 393 CNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI 452

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           A   + D  ++N  I   C+  ++  A E++ RM    V PD  TY++ + G CK   YE
Sbjct: 453 AKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYE 512

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           D +  F+ +  +  V + I+Y+ L E  C+  K+ EA+ +   M   G +    +F  L+
Sbjct: 513 DVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572

Query: 520 YGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIML----GLVKLQRAKDLLVVLAQML 574
            G C    +D A +L + +      S+T +TY  IM+    G + +  A+ L     +M 
Sbjct: 573 KGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN-IMINAFAGKLNMNMAEKL---FNKMC 628

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G + D   Y ++I    +   +     F  V ++ GL+P   T   +L+ L    ++H
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688

Query: 635 LVSSGINKLVSDS---EVLDS---------SMYNILINGLWKEGLTSQASY 673
                I+ +V      EV+++         +   I++  L K+G  +  +Y
Sbjct: 689 EAVGIIHLMVHKGIVPEVVNTIFEADKKEVAAPKIVVENLMKKGHITYFAY 739



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/553 (21%), Positives = 223/553 (40%), Gaps = 57/553 (10%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDTL------------NYLLEV 211
           ++++FN V     +++ GF   +  YK M+ K G     + +            N LLE 
Sbjct: 23  ALEIFNSV-----KKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEG 77

Query: 212 LF--------ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           ++           +I+ A+D F RM    C P+ +++  ++  L+     D +  +   M
Sbjct: 78  VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM 137

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            D GI  ++  +T  +   CR ++   A RL   M +       + Y  +I    E    
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
            +A+++ E+M+ +G+ P    F  ++  LC  G   ES   L        SP        
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSP-------- 249

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                                 +  + NI I+  C+   + +A  LL   V   + PD  
Sbjct: 250 ----------------------NLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVI 286

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY+  + G CK     +A    R++  +    D  +Y+ +++G C++  +  A ++    
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           +  G     S++  LI GLC    +D+AI + + A   G          ++ GL +    
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
              L ++ +M   GC+ D+  Y ++I  + +   + D        +  G +PD  T  +L
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           + G     +L      ++++ +     D   YN ++NGL K G          LM+ KG 
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526

Query: 684 VPDATTHGLLVGS 696
           VP+  T+ +L  S
Sbjct: 527 VPNIITYNILTES 539



 Score = 42.4 bits (98), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 14/179 (7%)

Query: 61  LSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEM 115
           L+PD      L++   +  DL  A ++FK V  Q +F HT  TY  MI       N+   
Sbjct: 561 LTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMA 620

Query: 116 EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
           E L   M +  +         ++  F     +N     L+     G   S+  F  VL  
Sbjct: 621 EKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNC 680

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF--RRMHKKG 232
           +  ++R   + V +   MV  GIVP V      +  +FE ++ E A  +     + KKG
Sbjct: 681 LCLKRR-VHEAVGIIHLMVHKGIVPEV------VNTIFEADKKEVAAPKIVVENLMKKG 732


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 236/505 (46%), Gaps = 38/505 (7%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M+++   P+  T+ I+I GL   S+ D +  +L EM D G+  +   +  I+  LC+  K
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            E A  L  +M   +  P   TY  LI+ LC+   +D A  ++++ +  G  P    +  
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           +  GLC+ G+ DE+   +++  G   +P    +N L++  C A K   A  +LE +    
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + D  ++ I +  LC+   + KA +++  M+     P   TY+A + G C+    ++A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE------------------------ 498
            +F+++ ++    D+++Y  LV G C+  +  EA +                        
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 499 --------VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
                   VF  M+  GC  +  ++NI++ GLC   KVD+A       +S+G      +Y
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+ GL K  + K+   VL QM+  G   D   Y  L+    ++ +  D       M+K
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS-SMYNILINGLWKEGLTS 669
           AG+ PD  T  +L+ GL+  ++L      +++++ +  V+ + + YN +I+ L KEG   
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           QA  L+D M G G   +  T+ + +
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFI 505



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 246/510 (48%), Gaps = 13/510 (2%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E V +G VP+V T + L + L +  RI+ A +  + M   GC PN  T+  +I GL   S
Sbjct: 105 EFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKAS 164

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           + + +  +L  +   G   ++  YT I+  LC+E +L++A+++ + M      P  +TY 
Sbjct: 165 KTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYT 224

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            L+  LC   R+D+A+ I ++M+    T     +V +V G C+  +  E+   ++   G 
Sbjct: 225 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD---GI 281

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKA 426
             +P    +NAL++  C  G+      + E MA R  + +  ++NI +  LC++ ++ +A
Sbjct: 282 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           +  L  M  +  VPD  +Y+  + G  K    ++A +V  Q+    +  D+++Y+ L+  
Sbjct: 342 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 401

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C+ E+  +AV +   M K G    + ++N LI GL    ++  A  L      +G   +
Sbjct: 402 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 461

Query: 547 T-STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
             +TY  I+  L K    K  L+++  M   G   +   Y I I  + ++ +L + +   
Sbjct: 462 ACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL 521

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWK 664
           + M     + D  +  +++ GL    QL   S    ++V+   + + S  +N+LI+   K
Sbjct: 522 SEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTK 578

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                +A  LL+LM+ +G  P   T+ +++
Sbjct: 579 TKRLDEALTLLELMVQRGCSPSVITYNMVI 608



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 196/411 (47%), Gaps = 12/411 (2%)

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    + PD  TY  LI+ LC+  + D A+++L +M+  G+TP    F  I+ GLC+ GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 358 FDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNI 412
           F+ + + L    E  C      +N L+   C       AK ++++      + D  +++I
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
               LC+   I +A+EL+  M  +   P+  TY+  + G CK    E A  +   + +  
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            V D ++Y+ +V+GLC+  ++ +A+++   M K GC+ S  ++  L+ GLC   +VD+A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC--ALDVEAYCILIQ 590
            +     S   +     Y  ++ G  K  R K+     AQ +V+G      ++ Y  L+ 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKE-----AQKVVDGIRGTPYIDVYNALMD 295

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              ++ +L +    F  M   G VP+ +T   ++ GL    ++      +  + S   V 
Sbjct: 296 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 355

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           D   YNI+I+GL+K     +A  +LD M+  G  PDA T+  L+     EE
Sbjct: 356 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 197/390 (50%), Gaps = 10/390 (2%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P +D  N L++   +  R++   + F  M  +GC PN +T+ IV+ GL  + +VD++  
Sbjct: 284 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 343

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
            L  M   G   ++  Y  II  L + +K +EA ++   M    + PD +TY  L+   C
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP- 375
           +  R DDA  IL++MI  G+ P +  +  ++ GL +  +  ++   + +  + G V S  
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 463

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N +++  C  G    A  +++ M    + A+  ++NI I  LC+   + +A  LL  
Sbjct: 464 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 523

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYSKLVEGLCQVE 491
           M     + D  +Y+  ++G CK    + A ++ R+ V+ + L + S +++ L++   + +
Sbjct: 524 M---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTK 580

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++ EA+ +   M + GCS S  ++N++I  LC + KVDKA  L       G   ++ +YT
Sbjct: 581 RLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 640

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            ++ GL    R K+ L VL +M    C +D
Sbjct: 641 VLIYGLCGQGRGKEALQVLEEMASSDCEID 670



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 240/504 (47%), Gaps = 13/504 (2%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L  ALK+ + + +++    +  TY  ++  L   G V+E   + + MV +       A +
Sbjct: 201 LDKALKMVEGM-LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYV 259

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SLV  +    R   A +V+  +    +   +DV+N ++    +E R   +   V+++M  
Sbjct: 260 SLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKEGR-LDEIPNVFEDMAC 315

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G VPN+ T N +++ L +  +++ A      MH  GC P+  ++ I+I GL   S+  +
Sbjct: 316 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 375

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L +M   GI  +   Y  ++   C+E + ++A+ + K M    + PD +TY  LI+
Sbjct: 376 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 435

Query: 316 CLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV-- 372
            L +  RL DA +++ +M+  G +      +  I+  LC+ G   +++  ++   G+   
Sbjct: 436 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 495

Query: 373 --TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
             T  +N  ++  C  G+   A  +L +M    + D  S+   I  LC+ E++ +A +L 
Sbjct: 496 ANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEVSYTTVIIGLCKAEQLDRASKLA 553

Query: 431 GRMV-VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
             MV V  +     T++  +    K    ++AL +   +  +      I+Y+ ++  LC+
Sbjct: 554 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK 613

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           ++K+ +A E+F  M+  G   SS S+ +LIYGLC   +  +A+++     SS        
Sbjct: 614 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLK 673

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQM 573
             K+ L L    R ++   +L +M
Sbjct: 674 CRKLYLALRGQGRGEEAAELLRRM 697



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 140/618 (22%), Positives = 260/618 (42%), Gaps = 74/618 (11%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMV 194
           +L+        V+ A  ++    S GF   V  ++++   +   KRG  D  F + KEM 
Sbjct: 85  TLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC--KRGRIDEAFELVKEMS 142

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G  PN+ T N L++ L + ++ E A +    +   G  P+  T+ I++ GL    R+D
Sbjct: 143 GNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLD 202

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ ++  M   G    +  YT ++  LCR  +++EA  +FK M + D   D L Y  L+
Sbjct: 203 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 262

Query: 315 NCLCENLR--------------------------------LDDANDILEDMIVIGLTPTD 342
           N  C++ R                                LD+  ++ EDM   G  P  
Sbjct: 263 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 322

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             +  ++ GLC+ GK DE+  FLE        P    +N +++    A K   A+ +L++
Sbjct: 323 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 382

Query: 399 MADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M    I  D  ++N  +   C+ E    A  +L  M+ + V PD  TY+  + G  +   
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442

Query: 458 YEDALRVFRQVSAQSLVLDS-ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             DA  +  ++     V+ +  +Y+ +++ LC+   + +A+ +   M+ +G   ++ ++N
Sbjct: 443 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 502

Query: 517 I--------------------------------LIYGLCVMRKVDKAIRL-RSLAYSSGT 543
           I                                +I GLC   ++D+A +L R +    G 
Sbjct: 503 IFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 562

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             T+ T+  ++    K +R  + L +L  M+  GC+  V  Y ++I  + + +K+     
Sbjct: 563 CITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 622

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F+ M   G+V    +   L++GL    +       + ++ S    +D      L   L 
Sbjct: 623 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALR 682

Query: 664 KEGLTSQASYLLDLMLGK 681
            +G   +A+ LL  M  K
Sbjct: 683 GQGRGEEAAELLRRMTTK 700



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 165/358 (46%), Gaps = 10/358 (2%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N L++  C A K   A  +L +M DR +  D  ++N  +  LC+  +  +A+ LL  M 
Sbjct: 13  YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 72

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
             +  P C TY+  + G CK  N + A  +  +  +   V D ++YS L +GLC+  +I 
Sbjct: 73  ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRID 132

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA E+   MS NGC+ +  ++N LI GLC   K +KA  L     SSG      TYT I+
Sbjct: 133 EAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL K  R    L ++  ML  GC   V  Y  L++ +    ++ +    F  MV     
Sbjct: 193 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 252

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            D    +SL++G    S+       ++ +     +    +YN L++G  KEG   +   +
Sbjct: 253 ADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNV 309

Query: 675 LDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
            + M  +G VP+  T+     GL     V E          +   PD VS +I+ +GL
Sbjct: 310 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 1/249 (0%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D  +Y+ L++GLC+  K  +A E+   M   G +  + +FN ++ GLC   K ++A  L 
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
           ++        +  TY  ++ GL K Q       ++ + +  G   DV  Y IL   + ++
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            ++ +       M   G  P+  T  +L+ GL   S+       +  LVS   V D   Y
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDSSSF 714
            I+++GL KEG   +A  +++ ML +G  P   T+  L+ G      +D     F     
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248

Query: 715 PDSVSDILA 723
            D  +D LA
Sbjct: 249 KDCTADALA 257



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 5/275 (1%)

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
           N++ + LI  L  TN L  A ++   +           TY  +I +L   G +++   L 
Sbjct: 427 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 486

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
            +M               +       R++ A  +L  M++   +  V    V++G    E
Sbjct: 487 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT--LRDEVSYTTVIIGLCKAE 544

Query: 180 KRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           +   A  +   +EMV   G+     T N L++   +T R++ AL     M ++GC P+  
Sbjct: 545 QLDRASKL--AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVI 602

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ +VI  L    +VD +  +  EM   GI      YT +I  LC + + +EA+++ + M
Sbjct: 603 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            + D   D+L   +L   L    R ++A ++L  M
Sbjct: 663 ASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 163/699 (23%), Positives = 298/699 (42%), Gaps = 42/699 (6%)

Query: 53  KIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           +++ L+  L+P  +  V+ N  DL  A   F W   Q  + HT  TY  MI +L  A   
Sbjct: 139 QLERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQET 198

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           + +  +   M KE +      L SL+ +F +   V+GA+ +   M S G   S +++N V
Sbjct: 199 DAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFV 258

Query: 173 LGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           L  +V  K GF    V V+ ++ +  I P+  T    +     + R++ A +  + M K 
Sbjct: 259 LELLV--KGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKS 316

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P   TF ++I  L+ +  +D++      M +L     +  YT ++  L +  +LEEA
Sbjct: 317 GIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEA 376

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             +F  M+  +  PD + Y  LI+ L +    D A  + ++M   GL P    +  ++  
Sbjct: 377 CEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISV 436

Query: 352 LCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-------- 399
           L + G+  E+     D       P    +N L++     G+      I+++M        
Sbjct: 437 LGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECI 496

Query: 400 ---------------ADRKIADCD---------SWNIPIRWLCENEEIRKAYELLGRMVV 435
                          ADR +             ++N  +     N  + +A +LL  M  
Sbjct: 497 ISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK 556

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
              +P   TY+  V G  K    ++A+ + R++  Q      ++YS L+    + ++  E
Sbjct: 557 HECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEE 616

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           ++ +F  M + GC    S+++++I  LC    VD+A+ +       G       Y  ++ 
Sbjct: 617 SLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLS 676

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            LVK ++    L +  ++       D   Y I++  + + N++ +     + M    ++P
Sbjct: 677 SLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILP 736

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  SLL GL    +L    +   K+  +    D   Y  L++ L K G  S A  + 
Sbjct: 737 DLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIF 796

Query: 676 DLMLGKGWVPDATTHGLLVGSSVGEE--IDSRRFAFDSS 712
             M  K  VPD  T+  L+  S+G+E  ++   + F++S
Sbjct: 797 RAMAKKRCVPDVVTYSSLI-DSLGKEGRVEEAYYFFENS 834



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 158/644 (24%), Positives = 277/644 (43%), Gaps = 55/644 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T+  +I  L  +GN++E       M   R  PNV     +LV       R+  A  V V 
Sbjct: 324 TFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV-TYTTLVNGLAKAGRLEEACEVFVE 382

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M           +N ++  +   K G AD    ++KEM   G+VPN+ T N ++ VL + 
Sbjct: 383 MKENNCSPDAIAYNTLIDGL--GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKA 440

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            R   A   F  + ++G  P+  T+  +I  L    ++D  ++I+ EM + G +      
Sbjct: 441 GRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGE------ 494

Query: 276 TCIIPM---LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
            CII        E  +E A R  +          E+TY  L++    N  +D+A  +LE 
Sbjct: 495 -CIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEV 553

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGK 388
           M      PT   +  +V GL + G+ DE+V+ L +     C      +++L+       +
Sbjct: 554 MKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQ 613

Query: 389 FFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              +  + ++M  +  +AD  ++++ I  LC+++++ +A ++ GRM    + P    Y  
Sbjct: 614 EEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKT 673

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +    K    + AL++F ++   SLV D+  Y+ +V GL +  ++ EA ++   M    
Sbjct: 674 LLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQN 733

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                 ++  L+ GL    ++++A  + +     G       YT +M  L K  +    L
Sbjct: 734 ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL 793

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF----------NVMV-------- 609
           ++   M  + C  DV  Y  LI S+ ++ ++++   FF          NV V        
Sbjct: 794 IIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853

Query: 610 -KAGLV----------------PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            K G+V                P+  T  +LL GLA   +L++    + ++     V D 
Sbjct: 854 GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDL 913

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             YNILI+G+ K G+  +A      M  KG VPD  T   L+ S
Sbjct: 914 VTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIES 957



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 155/642 (24%), Positives = 281/642 (43%), Gaps = 64/642 (9%)

Query: 66   LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
            +I VL        A ++F  +  Q        TY  +I  LG  G ++++  + + MV++
Sbjct: 433  MISVLGKAGRQPEAWQLFHDLKEQGAVPDVF-TYNTLIDVLGKGGQMDKVLAIIKEMVEK 491

Query: 126  RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK-LSVDVFNVVLGAIVEEKRGFA 184
                  E +IS   +  +   + GA R  V   S GFK L    +N ++ A +    G  
Sbjct: 492  G----GECIISRDSNAGHEGTIEGADRT-VEYPSLGFKSLGEITYNTLMSAFIH--NGHV 544

Query: 185  D-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            D  V + + M K   +P V T   L++ L +  R++ A+   R M K+GC P+  T+  +
Sbjct: 545  DEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSL 604

Query: 244  IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
            +       + ++S+S+  EM   G   ++S Y+ +I  LC+ + +++A+ +F  M+   +
Sbjct: 605  MASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGM 664

Query: 304  MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             P    Y+ L++ L ++ ++D A  I  ++    L P   V+  +V GL +  + DE+  
Sbjct: 665  EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA-- 722

Query: 364  FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
                 C  V S  N  +                       + D  ++   +  L ++  +
Sbjct: 723  -----CKLVDSMKNQNI-----------------------LPDLFTYTSLLDGLGKSGRL 754

Query: 424  RKAYELLGRMVVSSVVPDCATYSAF--VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
             +A+ +  +M      PD   Y++   VLGK    ++  AL +FR ++ +  V D ++YS
Sbjct: 755  EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSH--ALIIFRAMAKKRCVPDVVTYS 812

Query: 482  KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             L++ L +  ++ EA   F      GC+ +   ++ LI        VD+A+ L       
Sbjct: 813  SLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRR 872

Query: 542  GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
                   TY  ++ GL K  R      +L +M   GC  D+  Y ILI  + +   + + 
Sbjct: 873  QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEA 932

Query: 602  ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS-------- 653
              +F  M + G+VPD  T  SL+  L            ++KL+   E+ DS         
Sbjct: 933  ESYFKRMKEKGIVPDVITFTSLIESLGK----------VDKLLEACELFDSMEEEGYNPS 982

Query: 654  --MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
               YN+LI+ L + G   +A+ +   M  KG +PD  T G++
Sbjct: 983  VVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 261/534 (48%), Gaps = 17/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +M+++  +P+V     L+ V+    R +  +  +++M +K    + 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG+  ++  +T ++  LC E+++ EA+  F  
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL PT   +  IV G+C+ G 
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++N L   ++  ++      ++A+++  C  G+   A+ +  +M ++ I  D  ++N
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +     A +LL  M+   + PD  TY+A +    K   + +A  ++ ++  +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+YS +++G C+  ++  A  +F  M+  GCS +  +FN LI G C  +++D  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L      +G    T+TY  ++ G   +      L +L +M+  G   D+     L+  
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 592 MSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           + +  KLKD    F VM K+           G+ PD +T   L+ GL +  +        
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V D+  Y+ +I+GL K+    +A+ + D M  K + P+  T   L+
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 146/662 (22%), Positives = 279/662 (42%), Gaps = 66/662 (9%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMIL---KLGLAGNVEEMEGL------CQNMVKER-Y 127
           SA ++F   SI+      +   C+       L L     E++GL        +M++ R  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPL 76

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADF 186
           P+V +    L+   V   R +  + +   M     +  +  FN+++       K  FA  
Sbjct: 77  PSVVD-FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA-- 133

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +  + ++ K G+ P+V T   LL  L   +R+  ALD F +M +  C PN  TF  ++ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMP 305
           L    R+ ++V++L  M + G+Q     Y  I+  +C++     A+ L + M  +  ++P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + + Y  +I+ LC++ R  DA ++  +M   G+ P    +  ++ G C  G++ ++   L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
           ++      SP    +NAL+      GKFF A+ + ++M  R I  +  +++  I   C+ 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             +  A  +   M      P+  T++  + G C     +D + +  +++   LV D+ +Y
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 481 SKLV-----------------------------------EGLCQVEKITEAVEVFCCMSK 505
           + L+                                   +GLC   K+ +A+E+F  M K
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 506 -----------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
                      NG      ++NILI GL    K  +A  L       G    T TY+ ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            +  T ++L+ G      ++       +++S     D+     ++ GLW +    +A  +
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 675 LD 676
           L+
Sbjct: 674 LE 675



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 223/515 (43%), Gaps = 18/515 (3%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A+     M     + +V  F  ++  +  E R   + V +   M++ G+ P   T 
Sbjct: 164 RVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGR-IVEAVALLDRMMEDGLQPTQITY 222

Query: 206 NYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
             +++ + +     SAL+  R+M +     PN   +  +I  L  + R  D+ ++  EM 
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + GI  +L  Y  +I   C   +  +A +L + M    + PD +TY  LIN   +  +  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALL 380
           +A ++ ++M+  G+ P    +  ++ G C+  + D + +          SP+    N L+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 381 ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +  C A +      +L +M +   +AD  ++N  I       ++  A +LL  M+ S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLC 488
           PD  T    + G C     +DAL +F+ +      LD+            +Y+ L+ GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              K  EA E++  M   G    + +++ +I GLC   ++D+A ++     S   S    
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T+T ++ G  K  R  D L +  +M   G   +   Y  LI    +   +      F  M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           + +G+ PD  T+ ++L GL    +L    + + KL
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ ++ AI L S    S    +   + K+M  +V+++R   ++ +  +M  +    
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ ++ ILI+     +KL      F  + K GL PD  T  +LLHGL    ++       
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   +   +   +  L+NGL +EG   +A  LLD M+  G  P   T+G +V
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 261/534 (48%), Gaps = 17/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +M+++  +P+V     L+ V+    R +  +  +++M +K    + 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG+  ++  +  ++  LC E+++ EA+ LF  
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL PT   +  IV G+C+ G 
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++N L   ++  ++      ++A+++  C  G+   A+ +  +M ++ I  D  ++N
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +     A +LL  M+   + PD  TY+A +    K   + +A  ++ ++  +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+YS +++G C+  ++  A  +F  M+  GCS +  +FN LI G C  +++D  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L      +G    T+TY  ++ G   +      L +L +M+  G   D+     L+  
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 592 MSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           + +  KLKD    F VM K+           G+ PD +T   L+ GL +  +        
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V D+  Y+ +I+GL K+    +A+ + D M  K + P+  T   L+
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 234/540 (43%), Gaps = 52/540 (9%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G+ P+V T N LL  L   +R+  AL+ F +M +  C PN  TF  ++ GL 
Sbjct: 136 TFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              R+ ++V++L  M + G+Q     Y  I+  +C++     A+ L + M  +  ++P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ LC++ R  DA ++  +M   G+ P    +  ++ G C  G++ ++   L++
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 SP    +NAL+      GKFF A+ + ++M  R I  +  +++  I   C+   
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  +   M      P+  T++  + G C     +D + +  +++   LV D+ +Y+ 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 483 LV-----------------------------------EGLCQVEKITEAVEVFCCMSK-- 505
           L+                                   +GLC   K+ +A+E+F  M K  
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 506 ---------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
                    NG      ++NILI GL    K  +A  L       G    T TY+ ++ G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T ++L+ G      ++       +++S     D+     ++ GLW +    +A  +L+
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 208/474 (43%), Gaps = 23/474 (4%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+       R+  A+ +L  M   G + +   +  ++  + ++    +   
Sbjct: 182 PNVV-TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            + K    + I+PNV   + +++ L +  R   A + F  M +KG  P+  T+  +I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
            ++ R  D+  +L EM +  I  ++  Y  +I    +E K  EA  L+  M    ++P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  +I+  C+  RLD A  +   M   G +P    F  ++ G C   + D+ +  L +
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 368 --KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADR----KIADCDSWNIPIRWLCE 419
             + G V  T+ +N L+      G    A  +L++M        I  CD+    +  LC+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL---LDGLCD 477

Query: 420 NEEIRKAYELLGRMVVS-----------SVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           N +++ A E+   M  S            V PD  TY+  + G      + +A  ++ ++
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + +V D+I+YS +++GLC+  ++ EA ++F  M     S +  +F  LI G C   +V
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           D  + L       G      TY  ++ G  K+      L +  +M+  G   D 
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 224/515 (43%), Gaps = 18/515 (3%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A+ +   M     + +V  F  ++  +  E R   + V +   M++ G+ P   T 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR-IVEAVALLDRMMEDGLQPTQITY 222

Query: 206 NYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
             +++ + +     SAL+  R+M +     PN   +  +I  L  + R  D+ ++  EM 
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + GI  +L  Y  +I   C   +  +A +L + M    + PD +TY  LIN   +  +  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALL 380
           +A ++ ++M+  G+ P    +  ++ G C+  + D + +          SP+    N L+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 381 ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +  C A +      +L +M +   +AD  ++N  I       ++  A +LL  M+ S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLC 488
           PD  T    + G C     +DAL +F+ +      LD+            +Y+ L+ GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              K  EA E++  M   G    + +++ +I GLC   ++D+A ++     S   S    
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T+T ++ G  K  R  D L +  +M   G   +   Y  LI    +   +      F  M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           + +G+ PD  T+ ++L GL    +L    + + KL
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 83/174 (47%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ ++ AI L S    S    +   + K+M  +V+++R   ++ +  +M  +    
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ ++ ILI+     +KL      F  + K GL PD  T  +LLHGL    ++    +  
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   +   +   +  L+NGL +EG   +A  LLD M+  G  P   T+G +V
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 157/662 (23%), Positives = 301/662 (45%), Gaps = 26/662 (3%)

Query: 33  IPLSSETDMI--KSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQK 90
           IP    T+ I    ++  +Y    Q ++  +    ++  L    D+  A   F+ ++  K
Sbjct: 18  IPFVLNTNPILNPGNKPPEY----QEIKTPIKESDVVMRLRTETDIVLASNYFRSIANSK 73

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG- 149
            FQHT  TY  MI KLG   +V+ ++ L Q M  E      +  I++    +N YR  G 
Sbjct: 74  AFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINV----INTYRRVGL 129

Query: 150 ---AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
              A+++   +   G + +V ++N +L A++ E R F     +Y  M + G  PNV T N
Sbjct: 130 AEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENR-FQMIEPIYSNMKRDGKEPNVYTYN 188

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LL+ L + NR++ A      M  KGC P+  ++  VI  +    +V+++  +      +
Sbjct: 189 ILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SI 243

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
             Q  +S Y  +I   CRE K++E   L   M    + P+ +TY  +I+ L     ++ A
Sbjct: 244 RFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELA 303

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             +   M V G +P    F  +++G    G+  E++N           P    +N L+  
Sbjct: 304 LAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHG 363

Query: 383 CCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C+ GK   A  +  KM     + +  ++   I    +  ++  A E+  +M+ +  +P+
Sbjct: 364 LCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPN 423

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              Y++ V   C+   +  A  +  ++S  +   ++++++  ++GLC   ++  A+ +FC
Sbjct: 424 VVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFC 483

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + GCS +  ++N ++ GL    ++ +A+ L +     G      TY  I  G   + 
Sbjct: 484 QMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVG 543

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG-LVPDRETM 620
           + ++ L +L +MLV G   D   Y  L  +   Q K+K      + +   G  VP+    
Sbjct: 544 KFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAY 603

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            SLL G+ +   +      ++K++++   L+++ +N L+ GL+         ++LD +L 
Sbjct: 604 TSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILT 663

Query: 681 KG 682
            G
Sbjct: 664 SG 665



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 95/462 (20%), Positives = 192/462 (41%), Gaps = 8/462 (1%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T++I+I+ L     VD    +L +M   GI      +  +I    R    E+A+++F  +
Sbjct: 81  TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           R     P    Y  L++ +    R      I  +M   G  P    +  +++ LC+  + 
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
           D +   L +       P    +  ++      GK   A+    +++ R   +   +N  I
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR----ELSIRFQPNVSVYNALI 256

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C   ++++ + LLG+MV   + P+  TYS  +     + N E AL V+ ++  +   
Sbjct: 257 NGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCS 316

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            +  +++ L++G     ++ EA+ ++  M++ G   +  ++N LI+GLC   K+ +A+ +
Sbjct: 317 PNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSV 376

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            S    +G S   STY  ++ G  K         +  +M+  GC  +V  Y  ++  +  
Sbjct: 377 SSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCR 436

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            +           M      P+  T  + + GL    ++    +   ++       +   
Sbjct: 437 SSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKT 496

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           YN +++GL KE    +A  L+  M  KG   +  T+  + G 
Sbjct: 497 YNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 105/243 (43%), Gaps = 12/243 (4%)

Query: 461 ALRVFRQVS-AQSLVLDSISYSKLVEGL---CQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           A   FR ++ +++     ++Y  ++E L   C V+ +   ++    M   G S S   F 
Sbjct: 62  ASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQ---MKLEGISCSEDLFI 118

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +I     +   ++A+++       G   T   Y  ++  ++   R + +  + + M  +
Sbjct: 119 NVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRD 178

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   +V  Y IL++++ + N++         M   G  PD  +  +++  +   S+L  V
Sbjct: 179 GKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSM---SKLGKV 235

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                + +S     + S+YN LING  +E    +   LL  M+ KG  P+  T+  ++ S
Sbjct: 236 EEA--RELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293

Query: 697 SVG 699
             G
Sbjct: 294 LSG 296


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 258/553 (46%), Gaps = 43/553 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L +I + KR ++  + + ++M   GI  NV TLN L+      NR+  A     ++
Sbjct: 77  FAKILTSITKVKR-YSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKI 135

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K GC P++ +F  +IKGL    ++ +++ +  +M   G Q ++  Y  +I  LC+    
Sbjct: 136 LKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHT 195

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  PD + Y  LI+ LC++ +   A ++  +MI  G++P      +I
Sbjct: 196 SAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISP------NI 249

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           V                   C       N+L+   CN G++     +L +M D KI  + 
Sbjct: 250 V------------------TC-------NSLVYALCNLGEWKHVNTLLNEMVDSKIMPNA 284

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S    +  LC+   + +A++++  M  S V PD  TY+A + G C     ++A++VF  
Sbjct: 285 ISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDM 344

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +    +  SY+ L+ G C++E++ +A+ +F  M +     ++ ++N LI+GLC + +
Sbjct: 345 MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 404

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCAL--DV 582
           +  AI L     + G      TY  ++  L K   L +A  LL       +EG  L  D+
Sbjct: 405 LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA-----IEGSNLDPDI 459

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
           + Y I+I  M    +L+D    F+ +   GL P+  T   + HGL     L   +    +
Sbjct: 460 QIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFME 519

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           +  ++   D   YN +  G  +   TS+A  LL+ ML +G+  D +T  LLVG    + +
Sbjct: 520 MDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579

Query: 703 DSRRFAFDSSSFP 715
           D          FP
Sbjct: 580 DQSEAHKLEDMFP 592



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/482 (20%), Positives = 193/482 (40%), Gaps = 35/482 (7%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F RM      P+   F  ++  +    R    +S+  +M   GI   +   
Sbjct: 53  NTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C  N++  A  +   +  L   PD  ++  LI  LC   ++ +A  + + MI 
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            G  P   ++  ++ GLC+ G    ++  L         P                    
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQP-------------------- 212

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                     D   +   I  LC++ +  +A+ L   M+   + P+  T ++ V   C L
Sbjct: 213 ----------DVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             ++    +  ++    ++ ++IS + +V+ LC+   + +A +V   M ++G      ++
Sbjct: 263 GEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTY 322

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI G C+  ++D+A+++  +    G +    +Y  ++ G  K++R    + +  +M  
Sbjct: 323 TALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCR 382

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +    +   Y  LI  +    +L+D    F  MV  G +PD  T   LL  L     L  
Sbjct: 383 QKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDK 442

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG-----WVPDATTH 690
             + +  +   +   D  +Y I+I+G+ + G    A  L   +  KG     W  +  TH
Sbjct: 443 AMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTH 502

Query: 691 GL 692
           GL
Sbjct: 503 GL 504



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 3/283 (1%)

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
             RM+     P    ++  +    K+  Y   L + R++ +  +  +  + + L+   C 
Sbjct: 62  FNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCH 121

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           + ++  A  V   + K GC   ++SF  LI GLC+  ++ +A+ L       G       
Sbjct: 122 LNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVI 181

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ GL K       + +L  M    C  DV  Y  LI S+ +  +       F+ M+
Sbjct: 182 YATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMI 241

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGLWKEGLT 668
             G+ P+  T  SL++ L +  +   V++ +N++V DS+++ +++    +++ L KEG+ 
Sbjct: 242 TKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV-DSKIMPNAISLTTVVDALCKEGMV 300

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFD 710
           +QA  ++D+M   G  PD  T+  L+ G  +  E+D     FD
Sbjct: 301 AQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%)

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           + KI+  + K++R   +L +  +M   G   +V    +LI S    N++         ++
Sbjct: 77  FAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKIL 136

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G  PD  +  +L+ GL    Q+       +K++ +    D  +Y  LINGL K G TS
Sbjct: 137 KLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS 196

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            A  LL  M      PD   +G L+ S   +   ++ F   S      +S
Sbjct: 197 AAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGIS 246


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 261/534 (48%), Gaps = 17/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +M+++  +P+V     L+ V+    R +  +  +++M +K    + 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG+  ++  +  ++  LC E+++ EA+ LF  
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL PT   +  IV G+C+ G 
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++N L   ++  ++      ++A+++  C  G+   A+ +  +M ++ I  D  ++N
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +     A +LL  M+   + PD  TY+A +    K   + +A  ++ ++  +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+YS +++G C+  ++  A  +F  M+  GCS +  +FN LI G C  +++D  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L      +G    T+TY  ++ G   +      L +L +M+  G   D+     L+  
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 592 MSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           + +  KLKD    F VM K+           G+ PD +T   L+ GL +  +        
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V D+  Y+ +I+GL K+    +A+ + D M  K + P+  T   L+
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 234/540 (43%), Gaps = 52/540 (9%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G+ P+V T N LL  L   +R+  AL+ F +M +  C PN  TF  ++ GL 
Sbjct: 136 TFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              R+ ++V++L  M + G+Q     Y  I+  +C++     A+ L + M  +  ++P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ LC++ R  DA ++  +M   G+ P    +  ++ G C  G++ ++   L++
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 SP    +NAL+      GKFF A+ + ++M  R I  +  +++  I   C+   
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  +   M      P+  T++  + G C     +D + +  +++   LV D+ +Y+ 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 483 LV-----------------------------------EGLCQVEKITEAVEVFCCMSK-- 505
           L+                                   +GLC   K+ +A+E+F  M K  
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 506 ---------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
                    NG      ++NILI GL    K  +A  L       G    T TY+ ++ G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T ++L+ G      ++       +++S     D+     ++ GLW +    +A  +L+
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 208/474 (43%), Gaps = 23/474 (4%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+       R+  A+ +L  M   G + +   +  ++  + ++    +   
Sbjct: 182 PNVV-TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            + K    + I+PNV   + +++ L +  R   A + F  M +KG  P+  T+  +I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
            ++ R  D+  +L EM +  I  ++  Y  +I    +E K  EA  L+  M    ++P+ 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  +I+  C+  RLD A  +   M   G +P    F  ++ G C   + D+ +  L +
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 368 --KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADR----KIADCDSWNIPIRWLCE 419
             + G V  T+ +N L+      G    A  +L++M        I  CD+    +  LC+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL---LDGLCD 477

Query: 420 NEEIRKAYELLGRMVVS-----------SVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           N +++ A E+   M  S            V PD  TY+  + G      + +A  ++ ++
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + +V D+I+YS +++GLC+  ++ EA ++F  M     S +  +F  LI G C   +V
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           D  + L       G      TY  ++ G  K+      L +  +M+  G   D 
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 224/515 (43%), Gaps = 18/515 (3%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A+ +   M     + +V  F  ++  +  E R   + V +   M++ G+ P   T 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR-IVEAVALLDRMMEDGLQPTQITY 222

Query: 206 NYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
             +++ + +     SAL+  R+M +     PN   +  +I  L  + R  D+ ++  EM 
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + GI  +L  Y  +I   C   +  +A +L + M    + PD +TY  LIN   +  +  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALL 380
           +A ++ ++M+  G+ P    +  ++ G C+  + D + +          SP+    N L+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 381 ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +  C A +      +L +M +   +AD  ++N  I       ++  A +LL  M+ S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLC 488
           PD  T    + G C     +DAL +F+ +      LD+            +Y+ L+ GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              K  EA E++  M   G    + +++ +I GLC   ++D+A ++     S   S    
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T+T ++ G  K  R  D L +  +M   G   +   Y  LI    +   +      F  M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           + +G+ PD  T+ ++L GL    +L    + + KL
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 83/174 (47%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ ++ AI L S    S    +   + K+M  +V+++R   ++ +  +M  +    
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ ++ ILI+     +KL      F  + K GL PD  T  +LLHGL    ++    +  
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   +   +   +  L+NGL +EG   +A  LLD M+  G  P   T+G +V
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/628 (24%), Positives = 281/628 (44%), Gaps = 54/628 (8%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA-----GNVEEMEGLCQNMVKERYPNV 130
           L+  L I   + ++ R    A +  K + ++G+      G +     LC++      P+V
Sbjct: 46  LTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKS-----NPSV 100

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
            + LI +   ++    V  A+     M   GF  SV   N++LG +V+E++  A ++F +
Sbjct: 101 FDLLIRV---YLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF-F 156

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           KEM+   + P+V T N L+ VL    +++ A    ++M + G  P+  T+  V+      
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R   ++ ++ +M   GI+ +   Y  ++  LC+ N+  +   L K MR   + P+E+TY
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +IN   +  ++  A  I ++M ++ L P    +  ++ G C  G F++++  LE    
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRK 425
               P    ++ALL   C   KF L+K ILE+M  +  I  C ++   I  LC N  + +
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           + +LL +M+   VVPD  T+S  + G C++   ++   +  ++    L  +SI Y+ L+ 
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+   + EA +V+  MS+ G   +    N+L+  LC   KV  A          G   
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            + T+                                   CI+    +  N LK  ++ F
Sbjct: 517 NSITFD----------------------------------CIINGYGNSGNGLKAFSM-F 541

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + M+KAG  P   T   LL  L    +       ++KL      +D+  YN ++   +K 
Sbjct: 542 DEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKS 601

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLL 693
           G+ + A  L D M+ +  +PD+ T+ ++
Sbjct: 602 GMLTDAVALFDEMVQRNVLPDSYTYAII 629



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/563 (22%), Positives = 238/563 (42%), Gaps = 44/563 (7%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           +++ G + E K G A  +F  +EM    ++PN  T N L++        E AL     M 
Sbjct: 278 SIINGFVKEGKIGAATRIF--QEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMME 335

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G  PN  ++  ++ GL  +++ + S SIL  M   G+ +    YT +I  LCR   L 
Sbjct: 336 ATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLN 395

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           E+++L   M    ++PD +T+  LIN  C   ++ +  +I+  M   GL P   ++  ++
Sbjct: 396 ESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLI 455

Query: 350 RGLCEVGKFDES--VNFLEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMAD-RKI 404
              C+ G   E+  V     + GY  +    N L+   C  GK  +A+     M+    +
Sbjct: 456 YNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNV 515

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  +++  I     +    KA+ +   M+ +   P   TY   +   C+   +++A R+
Sbjct: 516 PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRL 575

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             ++      +D+++Y+ ++    +   +T+AV +F  M +      S ++ I+  GL  
Sbjct: 576 LDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIR 635

Query: 525 MRKVDKAIRLR-SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             K+  A+    +L      S     YT  + GL +  ++K  L     M   G   D+ 
Sbjct: 636 RGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLI 695

Query: 584 A------------------------------------YCILIQSMSEQNKLKDCALFFNV 607
           A                                    Y IL+   +++  L  C+  +N+
Sbjct: 696 ATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNI 755

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M++ G+ PD+ T  SL+ G    + L +    + K++ D   +D   +N+LI    +   
Sbjct: 756 MMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDE 815

Query: 668 TSQASYLLDLMLGKGWVPDATTH 690
             +A  L+++M      PD TTH
Sbjct: 816 VGKAFDLVNIMNLFDIFPDMTTH 838



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/546 (22%), Positives = 236/546 (43%), Gaps = 54/546 (9%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M+K G+VP+V T + L+       +I++  +   +M+K G  PNS  +  +I       
Sbjct: 403 KMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V ++  +   M  +G          ++  LC++ K+  A   F  M  +  +P+ +T++
Sbjct: 463 DVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +IN    +     A  + ++MI  G  P+   +  +++ LC  GKF E+   L DK  Y
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL-DKLHY 581

Query: 372 VTSP-----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           + S      +N +L     +G    A  + ++M  R +  D  ++ I    L    ++  
Sbjct: 582 IPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVA 641

Query: 426 AYELLGRMVVSSVV-PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           A    G ++    V P+   Y+ FV G  +    + AL     +    L  D I+ + ++
Sbjct: 642 ALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVIL 701

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSS--SFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
            G  ++ K+ +A ++F  M  +G ++S S  ++NIL++G    + + K   L ++   +G
Sbjct: 702 NGYSRMGKMAKAGDIFTMMW-SGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTG 760

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD-------VEAYC--------- 586
                 T   ++LG  K       L +L +ML++G A+D       +  YC         
Sbjct: 761 IFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAF 820

Query: 587 -------------------ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
                               +I  +S  + +++  L  + M++ G +PDR   ++L++ +
Sbjct: 821 DLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRM 880

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNI----LINGLWKEGLTSQASYLLDLMLGKGW 683
                +H    G  KL  + E L  S  ++    L+ GL K G   +A  +LD ML K  
Sbjct: 881 CRMGHIH----GAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSL 936

Query: 684 VPDATT 689
           +P   T
Sbjct: 937 IPTIAT 942



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 124/549 (22%), Positives = 222/549 (40%), Gaps = 44/549 (8%)

Query: 189  VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            VY  M + G   N    N L+  L +  ++  A   F  M K G  PNS TF+ +I G  
Sbjct: 470  VYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYG 529

Query: 249  ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             +     + S+  EM   G       Y  ++  LCR  K +EA RL   +  +    D +
Sbjct: 530  NSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTV 589

Query: 309  TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            TY  ++    ++  L DA  + ++M+   + P    +  I  GL   GK   +++F  + 
Sbjct: 590  TYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649

Query: 369  CGY-VTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
             G    SP    +   ++    AG+   A    E M    + AD  + N+ +       +
Sbjct: 650  LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709

Query: 423  IRKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + KA ++   M    ++ P  ATY+  + G  K  N      ++  +    +  D ++  
Sbjct: 710  MAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCH 769

Query: 482  KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             L+ G C+   +   +++   M  +G ++   +FN+LI   C   +V KA  L ++    
Sbjct: 770  SLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLF 829

Query: 542  GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN----- 596
                  +T+  I+  L ++   ++  ++L +ML  GC  D   Y  L+  M         
Sbjct: 830  DIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGA 889

Query: 597  -KLKD-----------------------------CALFFNVMVKAGLVPDRETMLSLLHG 626
             KLKD                               L  + M++  L+P   T  +L+H 
Sbjct: 890  FKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHM 949

Query: 627  LADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                  L + +  +   +   +V LD   YN+LI+GL  +G  + A  L   +  +G  P
Sbjct: 950  FCRNESL-VEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWP 1008

Query: 686  DATTHGLLV 694
            + TT+ +L+
Sbjct: 1009 NMTTYCILI 1017



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 211/510 (41%), Gaps = 85/510 (16%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL-GIQ-LELSFYTC--IIPMLCRENKL 288
           C  N   F+++I+  +    V D++    E F L GI+    S YTC  ++  L +E K+
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDAL----ETFRLMGIRGFNPSVYTCNMLLGKLVKERKV 149

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
                 FK M A  + PD  T+  LIN LC   +L  A  +L+ M               
Sbjct: 150 GAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKM--------------- 194

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-A 405
                             ++ GYV S   +N +L   C  G++  A  ++++M  + I A
Sbjct: 195 ------------------EESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEA 236

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++N+ +  LC+N    K Y LL +M    + P+  TY++ + G  K      A R+F
Sbjct: 237 DACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIF 296

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           +++S  +L+ + ++Y+ L++G C      +A+ +   M   G   +  S++ L+ GLC  
Sbjct: 297 QEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRH 356

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            K +                              L ++     +L +M + G  +   AY
Sbjct: 357 AKFE------------------------------LSKS-----ILERMRMNGMIVGCIAY 381

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             +I  +     L +     + M+K G+VPD  T   L++G     ++  V   I K+  
Sbjct: 382 TAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYK 441

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDS 704
                +S +Y  LI    K G   +A  +   M   G+  +     +LV S   + ++  
Sbjct: 442 AGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501

Query: 705 RRFAFDSSS----FPDSVS-DILAEGLGNT 729
             + F   S     P+S++ D +  G GN+
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNS 531



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/323 (20%), Positives = 138/323 (42%), Gaps = 31/323 (9%)

Query: 165  SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            S+  +N++L    + K+  +    +Y  M++ GI P+  T + L+    ++  ++  L  
Sbjct: 729  SLATYNILLHGYAK-KKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKL 787

Query: 225  FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             ++M   G   +  TF ++I        V  +  ++  M    I  +++ +  II +L R
Sbjct: 788  LKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSR 847

Query: 285  ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             + ++E+  L   M     +PD   Y  L+N +C    +  A  + ++M  +G++  D  
Sbjct: 848  VSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVA 907

Query: 345  FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
               +VRGL + GK +E+   L+                      F L K ++  +A    
Sbjct: 908  ESALVRGLAKCGKVEEAKLVLD----------------------FMLRKSLIPTIA---- 941

Query: 405  ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
                ++   +   C NE + +A +L   M    V  D   Y+  + G C   +   AL++
Sbjct: 942  ----TFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKL 997

Query: 465  FRQVSAQSLVLDSISYSKLVEGL 487
            ++++  + L  +  +Y  L++ +
Sbjct: 998  YKEIKQRGLWPNMTTYCILIDAI 1020


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 262/534 (49%), Gaps = 17/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +M+++  +P+V     L+ V+    R +  +  +++M +K    + 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG+  ++  +  ++  LC E+++ EA+ LF  
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL PT   +  IV G+C++G 
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGD 234

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              +++ L   ++  ++      ++A+++  C  G+   A+ +  +M ++ I  D  ++N
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +     A +LL  M+   + PD  TY+A +    K   + +A  ++ ++  +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+YS +++G C+  ++  A  +F  M+  GCS +  +FN LI G C  +++D  
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L      +G    T+TY  ++ G   +      L +L +M+  G   D+     L+  
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 592 MSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           + +  KLKD    F VM K+           G+ PD +T   L+ GL +  +        
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V D+  Y+ +I+GL K+    +A+ + D M  K + P+  T   L+
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 233/540 (43%), Gaps = 52/540 (9%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G+ P+V T N LL  L   +R+  AL+ F +M +  C PN  TF  ++ GL 
Sbjct: 136 TFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              R+ ++V++L  M + G+Q     Y  I+  +C+      A+ L + M  +  ++P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNV 255

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ LC++ R  DA ++  +M   G+ P    +  ++ G C  G++ ++   L++
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 SP    +NAL+      GKFF A+ + ++M  R I  +  +++  I   C+   
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  +   M      P+  T++  + G C     +D + +  +++   LV D+ +Y+ 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 483 LV-----------------------------------EGLCQVEKITEAVEVFCCMSK-- 505
           L+                                   +GLC   K+ +A+E+F  M K  
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 506 ---------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
                    NG      ++NILI GL    K  +A  L       G    T TY+ ++ G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T ++L+ G      ++       +++S     D+     ++ GLW +    +A  +L+
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 224/515 (43%), Gaps = 18/515 (3%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A+ +   M     + +V  F  ++  +  E R   + V +   M++ G+ P   T 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR-IVEAVALLDRMMEDGLQPTQITY 222

Query: 206 NYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
             +++ + +     SALD  R+M +     PN   +  +I  L  + R  D+ ++  EM 
Sbjct: 223 GTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + GI  +L  Y  +I   C   +  +A +L + M    + PD +TY  LIN   +  +  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALL 380
           +A ++ ++M+  G+ P    +  ++ G C+  + D + +          SP+    N L+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 381 ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +  C A +      +L +M +   +AD  ++N  I       ++  A +LL  M+ S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLC 488
           PD  T    + G C     +DAL +F+ +      LD+            +Y+ L+ GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              K  EA E++  M   G    + +++ +I GLC   ++D+A ++     S   S    
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T+T ++ G  K  R  D L +  +M   G   +   Y  LI    +   +      F  M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           + +G+ PD  T+ ++L GL    +L    + + KL
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 208/478 (43%), Gaps = 31/478 (6%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+       R+  A+ +L  M   G + +     +  G IV+      D V
Sbjct: 182 PNVV-TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT----QITYGTIVDGMCKIGDTV 236

Query: 188 FVYKEMVK----AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                + K    + I+PNV   + +++ L +  R   A + F  M +KG  P+  T+  +
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I G  ++ R  D+  +L EM +  I  ++  Y  +I    +E K  EA  L+  M    +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +P+ +TY  +I+  C+  RLD A  +   M   G +P    F  ++ G C   + D+ + 
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 364 FLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADR----KIADCDSWNIPIR 415
            L +  + G V  T+ +N L+      G    A  +L++M        I  CD+    + 
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL---LD 473

Query: 416 WLCENEEIRKAYELLGRMVVS-----------SVVPDCATYSAFVLGKCKLCNYEDALRV 464
            LC+N +++ A E+   M  S            V PD  TY+  + G      + +A  +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           + ++  + +V D+I+YS +++GLC+  ++ EA ++F  M     S +  +F  LI G C 
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
             +VD  + L       G      TY  ++ G  K+      L +  +M+  G   D 
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 83/174 (47%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ ++ AI L S    S    +   + K+M  +V+++R   ++ +  +M  +    
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ ++ ILI+     +KL      F  + K GL PD  T  +LLHGL    ++    +  
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   +   +   +  L+NGL +EG   +A  LLD M+  G  P   T+G +V
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 170/712 (23%), Positives = 307/712 (43%), Gaps = 56/712 (7%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P H+  VL    D   AL++F  V  +  F+H+  TY  +I KLG  GN   ME    
Sbjct: 5   LLPKHVAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAME---- 60

Query: 121 NMVKERYPNVREALISLVF-----SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
           N++ E   ++  +L+  V+     S+    +V  A+ V   M+    + SV  +N ++  
Sbjct: 61  NVLAETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNI 120

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
           +VE    F     V+  M   GIVP+V T    ++    T R  SAL     M  +GC  
Sbjct: 121 LVESGY-FKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQL 179

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N+  +  V+ G    +   ++  +  +M  +GI  ++S +  ++  LC++ +++E+ RL 
Sbjct: 180 NAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLL 239

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             +    +  +  T+   I  LC    L  A  +L+ +I  GLTP    +  ++ GLC+ 
Sbjct: 240 NKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKN 299

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE-KMADRKIADCDSW 410
               E+  +L         P    +N L++  C  G    A+ IL+  +    + D  ++
Sbjct: 300 SNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTY 359

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
              I  LC+N+EI +A  L    +   + P    Y+  + G C+      AL++  ++S 
Sbjct: 360 CSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSE 419

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                D  +Y+ ++ GLC++  +++A  +       G      +FN LI G C   K++ 
Sbjct: 420 NGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMET 479

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
            I++ +  +S G +    TY  ++ GL K  + +DL+     M+ +GC  +   Y IL +
Sbjct: 480 TIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTE 539

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD--------------GSQ---- 632
           S+ +  K+ +     + ++  G+ PD  +  +++ G A+              G Q    
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599

Query: 633 ------------------LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
                             LH+      ++ +     D+  Y ++I+G    G T      
Sbjct: 600 HTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKF 659

Query: 675 LDLMLGKGWVPDATTHG-----LLVGSSVGEEIDSRRFAFDSSSFPDSVSDI 721
           L  M+ KG++P  TT G     L V   V E +D   F   +   P+ V+ I
Sbjct: 660 LLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSI 711


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 151/634 (23%), Positives = 299/634 (47%), Gaps = 20/634 (3%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L    ++  L N  ++  AL  FK ++    F+HT  TY  MI +LG   +++ ++ L Q
Sbjct: 38  LKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQ 97

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAI 176
            ++K    +  E L  +V   +N YR  G    A++    +   G K SV ++N VL A+
Sbjct: 98  -LMKLEGISCNEDLFVIV---INAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDAL 153

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
           + E + F     +Y  M + GI  NV T N LL+ L + +R+++A      M  KGC P+
Sbjct: 154 LSENK-FQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPD 212

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           + ++  V+  +    +V+++  +      + I+  +  Y  +I   CRE+K+EE   LF 
Sbjct: 213 AVSYTTVVSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFELFN 267

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M    + PD +TY  +IN L E   ++ A  +L  M + G +P    F  +++G    G
Sbjct: 268 EMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGG 327

Query: 357 KFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
           +  E+++     +++     T  +N L+   C+ GK   A  + +KM    +  +  +++
Sbjct: 328 RLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYS 387

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I    +  ++  A E+  +M+ +  +P+   Y+  V   C+   +  AL +   ++  
Sbjct: 388 TLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANG 447

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
           +   ++I+++  ++GLC   K   A++V   M + GC+ + +++N ++ GL   ++  +A
Sbjct: 448 NCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREA 507

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           +++              TY  I+ G       K  L +  ++LV G   D   Y  +I +
Sbjct: 508 LQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYA 567

Query: 592 MSEQNKLKDCALFFNVMVKAGL-VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
             +Q ++K      + + K G   PD  T  SLL G+ +   +      ++K++++    
Sbjct: 568 YCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICP 627

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           + + +N L+ GL+ +       +++D +L  G V
Sbjct: 628 NRATWNALVRGLFSKLGHLGPIHIVDNILANGKV 661



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/392 (22%), Positives = 175/392 (44%), Gaps = 10/392 (2%)

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-- 365
           LTY  +I  L     +D    +L+ M + G++  +D+FV ++      G  ++++     
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 366 --EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
             E  C      +N +L+   +  KF +   I   M    I  +  ++N+ ++ LC+N+ 
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A +LL  M     +PD  +Y+  V   C+L   E+A  +  ++ +   V     Y+ 
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPV-----YNA 248

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ G C+  K+ E  E+F  M+  G      +++ +I  L  M  V+ A+ + +  +  G
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            S    T+T +M G     R  + L +  +M+ EG   +  AY  LI  +    K+ +  
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAV 368

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
                M + G+ P+  T  +L+ G A    L   S   NK++++  + +  +Y  +++ L
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVL 428

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +  + + A +L++ M      P+  T    +
Sbjct: 429 CRNSMFNHALHLIENMANGNCPPNTITFNTFI 460



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 4/184 (2%)

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML-VEGCALDVEAYCILIQSM 592
            +S+A S+   +T  TYT  M+  +  +R  D +  L Q++ +EG + + + + I+I + 
Sbjct: 60  FKSIANSNSFKHTPLTYT-TMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAY 118

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
                 +     F  + + G  P  +    +L  L   ++  +++   N +  D   L+ 
Sbjct: 119 RRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNV 178

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFD 710
             YN+L+  L K      A  LL  M  KG +PDA ++  +V S   +G+  ++R  +  
Sbjct: 179 YTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMR 238

Query: 711 SSSF 714
             SF
Sbjct: 239 IKSF 242


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 265/576 (46%), Gaps = 23/576 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMV 194
           SL+ SF++  R +   +++++      + S ++ +  +GA V+ ++   A  +F   +M 
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIF--NKMK 167

Query: 195 KAGIVPNVDTLNYLLEVLFE---TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +    PN+ T N L+  L     ++ I  A    +   K G  PN+ +F I+I G    S
Sbjct: 168 RLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLES 227

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +V D++  + +M + G   +   Y  I+  L +   L+EA  L   M++  L P++ TY 
Sbjct: 228 KVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYN 287

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---------V 362
            L+   C    L +A  ++E M    L PT   +  +V G C  GK DE+         +
Sbjct: 288 MLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKM 347

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCEN 420
           N L D   Y     N L++ C           ++E+M D+K   C+  ++NI ++W+C+ 
Sbjct: 348 NVLPDVVTY-----NTLIDGCSQWRDSSEVYSLIEEM-DKKGVKCNAVTYNIILKWMCKK 401

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             + +A   L +M  + + PDC TY+  +   CK      A R+  +++++ L +D+ + 
Sbjct: 402 GNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTL 461

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++  LC  +K+ EA  + C  SK G  L   S+ ILI G     K D+A+ L      
Sbjct: 462 NTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKE 521

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                +T TY  ++ GL + ++    +  L +ML  G   D   Y I+I     +  ++ 
Sbjct: 522 RQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEK 581

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              F N M++    PD  T   LL GL     L       N LVS  + +D   YN +I+
Sbjct: 582 AFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIIS 641

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            L KEG    A  LL  M  K   PD  T+ +++ +
Sbjct: 642 SLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 119/569 (20%), Positives = 253/569 (44%), Gaps = 79/569 (13%)

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-- 188
           +E L + + ++V   + + A ++   M    ++ ++   N ++ ++V      +  +   
Sbjct: 140 KELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQ 199

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V K+ +K G+VPN ++ N L+      ++++ ALD   +M + GC P++ ++  ++  L+
Sbjct: 200 VLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALL 259

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               + ++  +L +M   G+      Y  ++   CR   L+EA ++ ++M   +L+P   
Sbjct: 260 KRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVW 319

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVD------------------ 347
           TY  L+N  C + ++D+A  I ++M  + + P   T +  +D                  
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 348 --------------IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
                         I++ +C+ G   E+   L+       SP    +N L+   C AGK 
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 390 FLAKCILEKMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             A  ++++M  + +   D+W  N  +  LC  +++ +AY LL        + D  +Y  
Sbjct: 440 GKAFRMMDEMTSKGLK-IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +LG  K    + AL ++ ++  + ++  +I+Y+ ++ GLCQ  K+ +A++    M +NG
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 508 CSLSSSSFNI-----------------------------------LIYGLCVMRKVDKAI 532
                +++NI                                   L+ GLC    ++KA+
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +L +   S G      TY  I+  L K  + ++   +L +M  +    D   Y ++I ++
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETML 621
           ++  ++K+   F   MV++G+V D+   L
Sbjct: 679 TDAGRIKEAEEFTLKMVESGIVHDQNLKL 707



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 184/461 (39%), Gaps = 65/461 (14%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV  F N  +++ A R+   M        V  +N ++     + R  ++   + +EM K 
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDG-CSQWRDSSEVYSLIEEMDKK 382

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+  N  T N +L+ + +   +  A     +M + G  P+  T+  +I       ++  +
Sbjct: 383 GVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKA 442

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF--------------------- 295
             ++ EM   G++++      I+  LC E KL+EA  L                      
Sbjct: 443 FRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILG 502

Query: 296 -----KMMRALDL---------MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
                K  RAL+L         MP  +TY  +I  LC++ ++D A D L +M+  GL P 
Sbjct: 503 YFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPD 562

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILE 397
           +  +  I+ G C  G  +++  F  +    +  P     N LL   C  G    A  +  
Sbjct: 563 ETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFN 622

Query: 398 KMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            +  + K  D  ++N  I  LC+  +   AY+LL  M    + PD  TY   +       
Sbjct: 623 TLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAG 682

Query: 457 NYEDALRVFRQVSAQSLVLD-----------------------SISYSKLVEGLCQVEKI 493
             ++A     ++    +V D                       SI+YS  +  LC   K 
Sbjct: 683 RIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKY 742

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK-VDKAIR 533
            +A+ +F  ++K G +L+  ++  L+ GL   RK   KA R
Sbjct: 743 KDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 151/593 (25%), Positives = 265/593 (44%), Gaps = 46/593 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN + GAI             +  M++    P+    N LL  + +     + L    +M
Sbjct: 39  FNTIDGAISS-----------FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM 87

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G  PN  T  I+I      +RV  + S+L ++  LG Q + + +T +I  +C E K+
Sbjct: 88  DSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKI 147

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA+ LF  M      PD +TY  LIN LC+      A  +L  M+     P    +  I
Sbjct: 148 GEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  LC+  +  E+ N   +      SP    +N+L+   CN  ++     +L +M D KI
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  S+N  +  LC+  ++ +A++++ +M+   V P+  TY+A + G C L   ++A++
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKI-------------------TEAVEVFCCMS 504
           VF  +  +  + + ISY+ L+ G C++++I                    EAV+VF  M 
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMV 387

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             GC  +  S+N LI G C ++++DKA+ L            T TY+ ++ GL  ++R +
Sbjct: 388 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 447

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D + +  +M+      ++  Y IL+  + +   L +       +  + L PD +     +
Sbjct: 448 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 507

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM-----L 679
            G+    +L       + L S     D   Y+I+INGL + GL  +AS L   M      
Sbjct: 508 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 567

Query: 680 GKGWVPDATTHGLLVGSSVG------EEIDSRRFAFDSSSFPDSVSDILAEGL 726
             G + +  T G L  +         +E+ +R F+ D+S+    V  +  +GL
Sbjct: 568 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 620



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 244/581 (41%), Gaps = 48/581 (8%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADF 186
           PN+    I L+ SF +  RV  A  VL  +   G +     F  ++ G  VE K G A  
Sbjct: 94  PNIYTLHI-LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA-- 150

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M+  G  P+V T   L+  L +     +A+     M +K C PN   +  +I  
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  + +V ++ ++  EM   GI  ++  Y  +I  LC   + +    L   M    +MPD
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +++  +++ LC+  ++ +A+D+++ MI  G+ P    +  ++ G C + + DE+V   +
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 367 ----DKCGYVTSPHNALLECCCNAGKFFLAK----------CILEKMADRKIAD---CD- 408
                 C      +N L+   C   +   A           C L      K+ D   C  
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKG 390

Query: 409 ------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
                 S+N  I   C+ + I KA  L G M    ++PD  TYS  + G C +   +DA+
Sbjct: 391 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 450

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F ++ A S + + ++Y  L++ LC+   + EA+ +   +  +         NI I G+
Sbjct: 451 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 510

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   +++ A  L S   S G      TY+ ++ GL +     +   +  +M   GC L+ 
Sbjct: 511 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 570

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  + +     N+          MV  G   D  TM   +  L+D             
Sbjct: 571 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD------------- 617

Query: 643 LVSDSEVLDSSMYNILINGL-WKEGLTSQASYLLDLMLGKG 682
                + LD S+  IL NG  W     S +S  L + L KG
Sbjct: 618 -----DGLDQSLKQILRNGCKWISTFDSSSSTGLHI-LQKG 652


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 251/539 (46%), Gaps = 56/539 (10%)

Query: 193  MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            M+++G+ P+V T N +L+ L +  RI  A + F+R  ++GC PN  T+  +I GL   ++
Sbjct: 499  MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 558

Query: 253  VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            +D+++ +L +M +LG +     Y+ ++  L +  ++E+A+ + + MR    +PD +TY  
Sbjct: 559  MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618

Query: 313  LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
            LI+   +  RL +A  +L +M+  G  P+   +  +  GLC  G+FDE+V  L+      
Sbjct: 619  LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678

Query: 373  TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKA 426
             +P    ++++++  C AG+   A    EKMA  ++      +++  I  LC+   I +A
Sbjct: 679  CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEA 738

Query: 427  YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF--------------------- 465
            YE L RM+ +  +PD  T+S  + G C     +  L +F                     
Sbjct: 739  YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINA 798

Query: 466  --------------RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
                           ++    +  +++++  +++ LC  ++I EAV  F  + ++ C   
Sbjct: 799  YCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED-CR-D 856

Query: 512  SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              S+N LI  L   R+ ++A+ L     + G S     Y  +M GL K    +    +L 
Sbjct: 857  EISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQ 916

Query: 572  QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            +M   G + D+  Y I+I  +S+  +L     +F  M++  L PD     SL+       
Sbjct: 917  EMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKAD 976

Query: 632  QLH-----LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            ++      L SSGI   +        +MY+ +++ L K   T +A  ++  M  K   P
Sbjct: 977  KVDDAWKLLRSSGIEPTI--------TMYSTMVDSLCKNRGTDKALEVIREMKSKNCEP 1027



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 235/545 (43%), Gaps = 60/545 (11%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +NV++  + +  R   D    +++ ++ G  P V T + +++ L   N ++        
Sbjct: 3   TYNVLINGLCKAGR-VCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +GC PN+ T+  ++  L+   R  ++ S+L  M   G   EL  +  II  LC+E +
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E A R+   M     +PD   +  L++ LCE  R+D+A    + +++IG TP    +  
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           +V GL + G+ + +   L+      +SP              F                 
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSP------------TVF----------------- 212

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++ I +  L +   +  AYE    M  + V P+  TY A + G CK    + AL + R 
Sbjct: 213 -TFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD 271

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
            ++Q+ +    ++S L+ GLCQ  ++ EA+++   M    C  +   FN L+ GLC  R+
Sbjct: 272 KNSQAGMF---AFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARR 325

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM-LVEGCALDVEAYC 586
           VD+A  L  +   SG S    TY  ++ GL KL+R  +    +  M   EGC+ +V  + 
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKA-GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            LIQ +    ++      +  MV   G+ P+R T   LL GL        +     +++ 
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445

Query: 646 DSEVLDSS---------------------MYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
                 SS                      YN L+ GL K G+   A  LL+ M+  G  
Sbjct: 446 REWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505

Query: 685 PDATT 689
           PD  T
Sbjct: 506 PDVIT 510



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 145/591 (24%), Positives = 261/591 (44%), Gaps = 38/591 (6%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF+ +V  ++ V+  +  +         + +EM   G  PN  T N L+  L    R + 
Sbjct: 31  GFRPTVVTYSTVIDGLCRDNE-VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKE 89

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A     RM   GC P   TF ++IKGL     ++ +  ++ EM D G   ++  +T ++ 
Sbjct: 90  AFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLH 149

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC   +++EA   F+ +  +   PD +TY  +++ L +  RL+ A  +L+ +     +P
Sbjct: 150 ALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSP 209

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
           T   F   V GL + G    +  F +       SP    ++AL++  C AGK  +A  +L
Sbjct: 210 TVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL 269

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
                +  A   +++  +  LC+   + +A +LL  M     VP+   +++ + G C+  
Sbjct: 270 RDKNSQ--AGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQAR 324

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSF 515
             ++A  +F  +       D I+Y+ L++GLC++ +I EA      M +  GCS +  +F
Sbjct: 325 RVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTF 384

Query: 516 NILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           + LI GLC   +V++A  +   +    G S    TY  ++ GL K   ++ L     QML
Sbjct: 385 STLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQML 444

Query: 575 ---------------------VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
                                V+ C   +  Y  L+  +S+   ++D       M+++GL
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGL 504

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD  T  S+L GL    ++    +   + +      +   Y+ LI+GL K     +A  
Sbjct: 505 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 564

Query: 674 LLDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           LL  M+  G   +  T+     GLL    + + +   R   D+   PD+V+
Sbjct: 565 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVT 615



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 256/555 (46%), Gaps = 38/555 (6%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VPNV   N L+  L +  R++ A + F  M + GC  +  T+ I++KGL    R+ ++  
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366

Query: 259 ILGEMFDL-GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDELTYEELINC 316
            +  M    G    +  ++ +I  LC   ++ +A  +++ M A++ + P+  TY  L+  
Sbjct: 367 HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEG 426

Query: 317 LC---ENLRLDDA-NDILE----------------DMIVIGL-TPTDDVFVDIVRGLCEV 355
           LC   ++ RL+     +LE                D +++ +  PT   +  +V GL + 
Sbjct: 427 LCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKS 486

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSW 410
           G   +++  LE       SP     N++L+  C   +   A  + ++  +R    +  ++
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 546

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           +  I  L +  ++ +A +LL +MV      +  TYS  V G  K+   EDA+ V RQ+  
Sbjct: 547 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 606

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
              + D+++Y+ L++G  + +++ EAV +   M + G   S  ++  L +GLC   + D+
Sbjct: 607 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 666

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV-EGCALDVEAYCILI 589
           A+ +     + G +    TY+ I+ GL K  R  + L    +M   E  A  V AY  LI
Sbjct: 667 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 726

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE- 648
             + +  ++ +   F   M++AG +PD  T   L++GL D  +   + +G+      +E 
Sbjct: 727 DGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR---IDTGLELFCGMAER 783

Query: 649 --VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-EEIDSR 705
               D   YN +IN    +G  S A  LL+ M   G   +  THG+++ +  G + ID  
Sbjct: 784 GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 706 RFAFDSSSFPDSVSD 720
              F   S P+   D
Sbjct: 844 VSYF--HSIPEDCRD 856



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 227/518 (43%), Gaps = 44/518 (8%)

Query: 128  PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
            PNV     +L+       +++ A+++L  M   G + +   ++ V+  +++  R   D V
Sbjct: 541  PNV-VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR-MEDAV 598

Query: 188  FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
             V ++M  AG +P+  T N L++  F+  R+  A+   R M + G  P+  T+  +  GL
Sbjct: 599  VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658

Query: 248  IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPD 306
              + R D++V IL  M   G       Y+ I+  LC+  ++ EA+  F KM R   + P 
Sbjct: 659  CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718

Query: 307  ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL- 365
             + Y  LI+ LC+  R+D+A + LE MI  G  P    F  ++ GLC+ G+ D  +    
Sbjct: 719  VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778

Query: 366  ---EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENE 421
               E  C      +NA++   C  G+F  A  +LE+M    IA +  +  I I+ LC N+
Sbjct: 779  GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838

Query: 422  EI---------------------------------RKAYELLGRMVVSSVVPDCATYSAF 448
             I                                  +A ELL  MV     PD   Y   
Sbjct: 839  RIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTV 898

Query: 449  VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
            + G  K  + E A ++ +++ ++    D  +Y+ ++ GL + +++  A + F  M +   
Sbjct: 899  MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL 958

Query: 509  SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
               +  ++ LI   C   KVD A +L     SSG   T + Y+ ++  L K +     L 
Sbjct: 959  KPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALE 1015

Query: 569  VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
            V+ +M  + C   +  +  L  +   + ++ +     N
Sbjct: 1016 VIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 194/443 (43%), Gaps = 51/443 (11%)

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  LIN LC+  R+ DA       I  G  PT   +  ++ GLC   + D+    LE+
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
             G   +P    +N L+      G+   A  +LE+MA      +  ++ + I+ LC+  E
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I  A+ ++  MV    VPD   ++  +   C+L   ++A   F+QV       D+++Y+ 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 483 LVEGLCQVEK-----------------------------------ITEAVEVFCCMSKNG 507
           +V+GL +  +                                   +T A E F  M + G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            S ++ +++ LI GLC   K+D A+ L     S    +    ++ ++ GL +  R ++ +
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMF---AFSSLLHGLCQAHRLEEAI 298

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L  M    C  +V  +  L+  + +  ++ +    F+VM ++G   D  T   LL GL
Sbjct: 299 QLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSM--YNILINGLWKEGLTSQASYLLDLMLG-KGWV 684
               ++      + +L+  +E    ++  ++ LI GL   G  +QA  + + M+  +G  
Sbjct: 356 CKLRRIPEAYRHV-ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414

Query: 685 PDATTHGLLVGSSVGEEIDSRRF 707
           P+  T+  L+   + +  DSRR 
Sbjct: 415 PNRFTYAFLL-EGLCKAGDSRRL 436



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%)

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L+ GLC+  ++ +A   F    + G   +  +++ +I GLC   +VDK  +L   
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G +    TY  ++  L+   RAK+   +L +M   GC  ++  + ++I+ + ++ +
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++      + MV  G VPD E    LLH L +  ++        +++      D+  YN 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFDS---- 711
           +++GL+K G    A  +L L+      P   T  + V   S  G    +  F FDS    
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEF-FDSMPQT 240

Query: 712 SSFPDSVS-DILAEGL 726
              P++V+ D L +GL
Sbjct: 241 GVSPNTVTYDALIDGL 256



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/199 (20%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 136  SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMV 194
            +L+ S V   R   A+ +L  M + G       +  V+  +   K G  +    + +EM 
Sbjct: 862  TLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF--KAGSPEVAAKLLQEMR 919

Query: 195  KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
              G  P++ T   ++  L +  ++  A D F  M +K   P++  +  +I       +VD
Sbjct: 920  SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979

Query: 255  DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            D+  +L      GI+  ++ Y+ ++  LC+    ++A+ + + M++ +  P    +  L 
Sbjct: 980  DAWKLLRSS---GIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLA 1036

Query: 315  NCLCENLRLDDANDILEDM 333
                   R+D+A  ++ D+
Sbjct: 1037 TAYVAEGRVDEAVKLVNDL 1055


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 240/495 (48%), Gaps = 8/495 (1%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G  P+V T   LLE + +++    A++    M  KGC PN  T+ ++I G+    R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+  IL  +   G Q ++  YT ++  LC   + ++   LF  M     +P+E+T++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+   C    ++ A  +L+ M   G TP   +   ++  +C+ G+ D++ +FL +   Y 
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
            +P    +  +L   C AG++  AK +L +M  +     + ++N  I  LC+   I +A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L+  M          TY+A V G C     + AL +F  +  +    ++I+Y+ L+ GL
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGL 474

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C  E++  A E+   M +  C L++ +FN+L+   C    V++A+ L +     G +   
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            T+  ++ G+ K   +++ L +L  ++ +G +LD   Y  ++  +S +++ ++     + 
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   G+ P       +L  L    +          +VS+  + + S Y ILI GL  EGL
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 654

Query: 668 TSQASYLLDLMLGKG 682
             +A Y+L  +  KG
Sbjct: 655 LKEARYVLSELYAKG 669



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 208/437 (47%), Gaps = 9/437 (2%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A  +L  ++S GF+  +  +  VL  +   +R + D   ++ EMV    VPN  T 
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARR-WDDVKVLFAEMVDKKCVPNEVTF 295

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L+        +E A+   ++M + GC PN+    IVI  +    RVDD+   L  M  
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G   +   YT ++  LCR  + E A  L   M   +  P+E+T+   I  LC+   ++ 
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSPHNALLECCC 384
           A  ++E M   G +     +  +V G C  G+ D ++    +  C   T  +  LL   C
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLC 475

Query: 385 NAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
           +A +   A  +L +M  +   DC     ++N+ + + C+   + +A EL+ +M+     P
Sbjct: 476 HAERLDAAAELLAEMIQK---DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++  + G  K CN E+AL +   + ++ + LD+I+YS +V+ L + ++  EA+++ 
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +   G       +N +++ LC   + D+AI   +   S+G     STY  ++ GL   
Sbjct: 593 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 652

Query: 561 QRAKDLLVVLAQMLVEG 577
              K+   VL+++  +G
Sbjct: 653 GLLKEARYVLSELYAKG 669



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 223/494 (45%), Gaps = 14/494 (2%)

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G  A +    + S    M   G Q  +  YT ++  +C+ +   EA+ +   MRA    P
Sbjct: 161 GASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP 220

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---- 361
           + +TY  +IN +C   R+DDA +IL  +   G  P    +  +++GLC   ++D+     
Sbjct: 221 NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF 280

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW-NIPIRWLCEN 420
              ++ KC       + L+   C  G    A  +L++M+        +  NI I  +C+ 
Sbjct: 281 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 340

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             +  AY+ L  M +    PD  +Y+  + G C+   +E A  +  ++  ++   + +++
Sbjct: 341 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 400

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           +  +  LCQ   I +A+++   M + GCS+   ++N L++G CV  +VD A+ L +   +
Sbjct: 401 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---N 457

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                 T TYT ++ GL   +R      +LA+M+ + C L+   + +L+    ++  +++
Sbjct: 458 LPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEE 517

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                N M++ G  P+  T  +LL G+            ++ LVS    LD+  Y+ +++
Sbjct: 518 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 577

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFP 715
            L +E  T +A  +L  +   G  P    +      L       + ID   +   +   P
Sbjct: 578 VLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMP 637

Query: 716 -DSVSDILAEGLGN 728
            +S   IL EGL +
Sbjct: 638 NESTYIILIEGLAH 651


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 227/476 (47%), Gaps = 5/476 (1%)

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           + +D++ RM  +G  PN   +  VI  L  +  V D+ +I+ ++F+  +  +   YT +I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              CR++ L+ A+++F  M      P+ +TY  LIN LC++ R+++A D++ +MI+ G+ 
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317

Query: 340 PTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           PT       +  LC++G ++++    V+     C      + AL+   C +G   +A  +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377

Query: 396 LEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
             +M+ D    +  ++N  I  L EN  I+ A+ +L  M  +   P+  TY+  + G C 
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + + A+ V   +  +    + ++Y+ +++G C     T A+ +   M   GC     S
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI G C + K++ A  L +     G      TYT ++ G  K ++      +L  M 
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             GC  +V+ Y +LI  +++QN          VM++ G+ P+  T  +++ GL       
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           L     NK++    + +   Y+ LI  L +EG   +A  L   +   G +PD  T+
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 242/520 (46%), Gaps = 14/520 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G + ++ ++N V+ A+ ++    AD   + K++ ++ + P  DT  Y   +L    
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDG-NVADAETIMKKVFESEMSP--DTFTYTSMILGHCR 262

Query: 217 R--IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           +  ++SAL  F +M K+GC PN+ T+  +I GL  + RV+++  ++ EM   GI    + 
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP--TA 320

Query: 275 YTCIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           +TC  P+  LC     E+A RLF  M+     P+  TY  LI+ LC +  L  A  +   
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 380

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGK 388
           M   G+ P    +  ++  L E  +   +   L     + C      +N +++  C  G 
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 389 FFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  ++  M  R   A+  ++N  I+  C++     A  +L  M      PD  +Y+ 
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK+   E A  +F ++    L  + ++Y+ L++G C+ EK+  A  +   M ++G
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  +  ++N+LI+GL        A  L  +    G      TYT ++ GL K       L
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M+ +GC  ++  Y  LI+++ ++ K+++    F  + + GL+PD  T + ++   
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
               ++    + + +++          Y +LI GL  E L
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 134/619 (21%), Positives = 238/619 (38%), Gaps = 68/619 (10%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           +DL SAL++F  ++ +    +T  TY  +I  L  +G V E   L + M+          
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTV-TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKE 192
               + +  +      A R+ V+M + G + +V  +  ++ G  V      A  + ++  
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVA--IGLFHR 380

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ PN  T N L+ +L E  RI+ A      M + GC PN  T+  +IKG      
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              ++ ++  M   G    L  Y  II   C       A+R+  +MR     PDE +Y E
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DK 368
           LI   C+  +++ A  +  +M+  GL P +  +  ++ G C+  K D + + LE      
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C      +N L+        F  A+ + + M +  I  +  ++   I  LC+N     A 
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS-------- 479
           E+  +M+    +P+  TYS+ +    +    E+A  +F ++    L+ D I+        
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680

Query: 480 ---------------------------YSKLVEGL--------------------CQVEK 492
                                      Y  L++GL                    C    
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 740

Query: 493 ITEAVEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
            T   +    MS         LS    N L+  L    +  +A  L     S G      
Sbjct: 741 QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQE 800

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y  ++  L++++     + V   M  +GC + +  Y  LI ++ + ++ K+  + F  M
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860

Query: 609 VKAGLVPDRETMLSLLHGL 627
           +     PD      L+ GL
Sbjct: 861 LMRTWNPDDVVQAVLIDGL 879



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/487 (20%), Positives = 195/487 (40%), Gaps = 65/487 (13%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +IK   +   +  ++S L  +   G+++ L  Y+ ++  L R       +  +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + P+ L Y  +IN LC++  + DA  I++ +    ++P    +  ++ G C     D ++
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                       P+                                +++  I  LC++  
Sbjct: 271 QVFNQMAKEGCEPNTV------------------------------TYSTLINGLCDSGR 300

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A++L+  M++  ++P   T +  ++  C +  YEDA R+F  +  +    +  +Y+ 
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 483 LVEGLC-----------------------------------QVEKITEAVEVFCCMSKNG 507
           L+ GLC                                   +  +I  A  V   M +NG
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           CS +  ++N +I G C++    KA+ + +     G S    TY  I+ G          L
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L  M   GC  D  +Y  LI    + +K++     FN MV  GL P+  T  +L+ G 
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               +L   +S +  +       +   YN+LI+GL K+   S A  L  +M+ +G  P+ 
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 688 TTHGLLV 694
            T+  ++
Sbjct: 601 VTYTAMI 607



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 131/329 (39%), Gaps = 62/329 (18%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L    N    E LC+ M++E  +PNV     +++     +   + A+ +   
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV-VTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   ++  ++ ++ A+ +E +   +   ++ E+ + G++P+  T   ++E    + 
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGK-VEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGL-----IANSRV------------------ 253
           ++E A +   RM K GC P   T+ ++IKGL     +A+ R+                  
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744

Query: 254 DDSVSI------------------------------------LGEMFDLGIQLELSFYTC 277
            D+VS+                                    LG M   G+  +   Y  
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  L R   ++ A+ +FK M           Y+ELI  LC+  R  +A    E+M++  
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             P D V   ++ GL   G  D  + FL 
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 27/278 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL--ISLVFSFVNHYRVNGAMRVLV 155
           TY  +I  LG  G VEE E L   +  ER+  + + +  + ++ +++   +V  A   L 
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAEL--ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEK-------RGFADFV----FVYKEMVK--------- 195
            M   G + ++  + V++  +  E            D V    F Y+   +         
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754

Query: 196 -AGIVP--NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            A + P  +V   N L+  L    R   A +    M  +G CP+   +  ++  L+    
Sbjct: 755 LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 814

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VD ++ +   M   G ++ L+ Y  +I  LC+ ++ +EA   F+ M      PD++    
Sbjct: 815 VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAV 874

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           LI+ L  +   D   + L  M      P+  ++  + R
Sbjct: 875 LIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 168/709 (23%), Positives = 300/709 (42%), Gaps = 57/709 (8%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSP-------DHLIRVLDNTNDLSSALKIFKWVS 87
           ++S  + IK  +       + ++R+ L P        H+  VL +     +A+  F+W  
Sbjct: 51  VTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAG 110

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYR 146
            Q  FQH   TY  ++  L    N  +   + + M+K    PN     I L+ SF    R
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNI-LIRSFARTRR 169

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTL 205
            + A+     M     K  +  F +++  +   K G  +  F V+ EM+  G VP    L
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLC--KAGMDEKAFEVFHEMMAMGFVPPDRAL 227

Query: 206 N-YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
           +  ++  L +  R++ A + F +M K G  P++  +  +I GL       +++ +L  M 
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
                     Y  ++  LC+   LE A  LF++M A    P+ + Y  LI+   ++ R+ 
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALL 380
           +A  + ++M+  G  P       ++ GLC+ G F+++    E+     C      +  ++
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 381 ECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G+   A  I++ M A     D  ++   +   C+   + +A +LL  +   S  
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467

Query: 440 PDCATYSAFVLGKCKLCNYEDAL-RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           P+   YS+ V G C   + E+ L  +F Q  A +  LD      ++ GLC+  ++ EA  
Sbjct: 468 PNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACR 527

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMR-------------------------------- 526
           +F  M   GC   ++++NILI GLC  R                                
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIG 587

Query: 527 -----KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                +VD+A+++   A S G +     YT +  GL    +    + +  +M+ +G A D
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
             AYC +I  + +  KL+D   FF+ M+  G  P   T  +L+  L     +        
Sbjct: 648 AAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707

Query: 642 KLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
            +++  E++ S M Y+ LI+G  K      A  L + M+ +G VP A T
Sbjct: 708 GMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 161/665 (24%), Positives = 291/665 (43%), Gaps = 37/665 (5%)

Query: 50  YEAKIQSLRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMIL 104
           Y    + L+  ++P+      LIR    T     A+  F+   I KR +   D +  +IL
Sbjct: 139 YAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFE---IMKRKRCKPDLHTFLIL 195

Query: 105 -----KLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS 159
                K G+  + +  E   + M     P  R    ++V + +   RV  A  V   M  
Sbjct: 196 VDCLCKAGM--DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
            GF      +N ++  +   K G A + + V   M+    VP   T   L+  L +   +
Sbjct: 254 CGFPPDAIAYNTMIDGLA--KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E A + FR M   G  PNS  +  +I G   + R+ ++ S+  EM + G + ++  +T +
Sbjct: 312 ERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+    E+A + F+ M      P+ +TY  +I  L +  R+ +A  I++ MI  G 
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGC 431

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALLECCCNAGKFFLA 392
            P    ++ ++ G C++G+ DE+   L+  DKC   +SP    +++L++  C+ G     
Sbjct: 432 FPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS--SSPNLQLYSSLVKGLCDGGS---V 486

Query: 393 KCILEKMADRKIADCDSWNIP-----IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           +  L+ + ++  A  ++ +       I  LC+   + +A  +  RMV     PD  TY+ 
Sbjct: 487 ENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546

Query: 448 FVLGKCKL--CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
            + G C+      E A  +   +     + D+++Y+ L  GLC++ ++  AV++    S 
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASS 606

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G +    ++  L  GLC   +VD+A+ L       G +   + Y  I+ GL+K ++ +D
Sbjct: 607 RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLED 666

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG-LVPDRETMLSLL 624
                 +M+ +G    V  Y  L+Q++     + +    F  M+  G LV       +L+
Sbjct: 667 ACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALI 726

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           HG     ++         ++S   V  +     L +GL + G T +A  LL  M   G  
Sbjct: 727 HGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786

Query: 685 PDATT 689
           P A T
Sbjct: 787 PHAAT 791



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 233/551 (42%), Gaps = 46/551 (8%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L        ALK+   + + K    T  TY  ++  L  AG +E  E L + M   
Sbjct: 266 MIDGLAKAGHAQEALKVLDNM-LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            +        SL+  F    R+  A  +   M   G++  V    V++  + +    F  
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN-FEQ 383

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
               ++EM++ G  PNV T   +++ L +  R+ +A    + M   GC P+S T+  ++ 
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTC---------------------------- 277
           G     R+D++  +L E+        L  Y+                             
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAEN 503

Query: 278 --------IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL--RLDDAN 327
                   II  LC+  +L+EA R+F+ M +    PD  TY  LIN LC +   R++ A 
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECC 383
            +L D+ ++G  P    +  +  GLC++G+ D +V  LE+    G+      + AL    
Sbjct: 564 ALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623

Query: 384 CNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C  G+   A  + ++M  +  A D  ++   I  L + +++  A +    M+     P  
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTV 683

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKITEAVEVFC 501
           ATY+A V   C   N ++A   F  + A+  ++ S+  Y  L+ G C+  K+  A+++F 
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M   G   ++ +   L  GL    K +KA  L     + G+    +T+T I+ GL K  
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803

Query: 562 RAKDLLVVLAQ 572
            +  LL ++ +
Sbjct: 804 ESGKLLKLVQE 814



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 118/540 (21%), Positives = 217/540 (40%), Gaps = 44/540 (8%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           +AG   +V T N L+ +L               M K G  PN+ +F I+I+      R D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM-PDELTYEEL 313
           D+V+    M     + +L  +  ++  LC+    E+A  +F  M A+  + PD   +  +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKC 369
           +  L +  R+ +A ++   M   G  P    +  ++ GL + G   E++    N L   C
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
                 +  L+   C AG    A+ +   MA      +   +   I    ++  +++A  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L   MV +   PD  T++  + G CK  N+E A + F ++       + ++Y+ +++GL 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           ++ ++  A  +   M  +GC   S ++  L+ G C + ++D+A +L        +S    
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 549 TYT------------------------------------KIMLGLVKLQRAKDLLVVLAQ 572
            Y+                                     I++GL K  R  +   +  +
Sbjct: 472 LYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQR 531

Query: 573 MLVEGCALDVEAYCILIQSM--SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           M+ EGC  D   Y ILI  +  S +N+++      + +   G +PD  T   L  GL   
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++      + +  S     D   Y  L  GL  +G   +A  L   M+ +G  PDA  +
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 197/463 (42%), Gaps = 42/463 (9%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  ++  L+A        +I  EM   GI      +  +I    R  + ++A+  F++M
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF-VDIVRGLCEVGK 357
           +     PD  T+  L++CLC+    + A ++  +M+ +G  P D      +VR L +  +
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 358 FDESVNFLE--DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
             E+       +KCG+   P +A+                             ++N  I 
Sbjct: 241 VKEAREVFGQMEKCGF---PPDAI-----------------------------AYNTMID 268

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            L +    ++A ++L  M+  + VP   TY   V   CK    E A  +FR ++A     
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +S+ Y+ L+ G  +  ++ EA  +F  M + G      +  ++I GLC     ++A +  
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TYT I+ GL K+ R  +   ++  M+  GC  D   Y  L+    + 
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS----EVLD 651
            +L + A   + + K    P+ +   SL+ GL DG     V + ++ L   S    E LD
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGS---VENTLDDLFEQSKAAAENLD 505

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +   +I GL K G   +A  +   M+ +G  PDATT+ +L+
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 227/476 (47%), Gaps = 5/476 (1%)

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           + +D++ RM  +G  PN   +  VI  L  +  V D+ +I+ ++F+  +  +   YT +I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              CR++ L+ A+++F  M      P+ +TY  LIN LC++ R+++A D++ +MI+ G+ 
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317

Query: 340 PTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           PT       +  LC++G ++++    V+     C      + AL+   C +G   +A  +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGL 377

Query: 396 LEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
             +M+ D    +  ++N  I  L EN  I+ A+ +L  M  +   P+  TY+  + G C 
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + + A+ V   +  +    + ++Y+ +++G C     T A+ +   M   GC     S
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI G C + K++ A  L +     G      TYT ++ G  K ++      +L  M 
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             GC  +V+ Y +LI  +++QN          VM++ G+ P+  T  +++ GL       
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           L     NK++    + +   Y+ LI  L +EG   +A  L   +   G +PD  T+
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 242/520 (46%), Gaps = 14/520 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G + ++ ++N V+ A+ ++    AD   + K++ ++ + P  DT  Y   +L    
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDG-NVADAETIMKKVFESEMSP--DTFTYTSMILGHCR 262

Query: 217 R--IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           +  ++SAL  F +M K+GC PN+ T+  +I GL  + RV+++  ++ EM   GI    + 
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP--TA 320

Query: 275 YTCIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           +TC  P+  LC     E+A RLF  M+     P+  TY  LI+ LC +  L  A  +   
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHR 380

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGK 388
           M   G+ P    +  ++  L E  +   +   L     + C      +N +++  C  G 
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 389 FFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  ++  M  R   A+  ++N  I+  C++     A  +L  M      PD  +Y+ 
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK+   E A  +F ++    L  + ++Y+ L++G C+ EK+  A  +   M ++G
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  +  ++N+LI+GL        A  L  +    G      TYT ++ GL K       L
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M+ +GC  ++  Y  LI+++ ++ K+++    F  + + GL+PD  T + ++   
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
               ++    + + +++          Y +LI GL  E L
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 134/619 (21%), Positives = 238/619 (38%), Gaps = 68/619 (10%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           +DL SAL++F  ++ +    +T  TY  +I  L  +G V E   L + M+          
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTV-TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKE 192
               + +  +      A R+ V+M + G + +V  +  ++ G  V      A  + ++  
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVA--IGLFHR 380

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ PN  T N L+ +L E  RI+ A      M + GC PN  T+  +IKG      
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              ++ ++  M   G    L  Y  II   C       A+R+  +MR     PDE +Y E
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DK 368
           LI   C+  +++ A  +  +M+  GL P +  +  ++ G C+  K D + + LE      
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C      +N L+        F  A+ + + M +  I  +  ++   I  LC+N     A 
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS-------- 479
           E+  +M+    +P+  TYS+ +    +    E+A  +F ++    L+ D I+        
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680

Query: 480 ---------------------------YSKLVEGL--------------------CQVEK 492
                                      Y  L++GL                    C    
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 740

Query: 493 ITEAVEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
            T   +    MS         LS    N L+  L    +  +A  L     S G      
Sbjct: 741 QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQE 800

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y  ++  L++++     + V   M  +GC + +  Y  LI ++ + ++ K+  + F  M
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860

Query: 609 VKAGLVPDRETMLSLLHGL 627
           +     PD      L+ GL
Sbjct: 861 LMRTWNPDDVVQAVLIDGL 879



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/487 (20%), Positives = 195/487 (40%), Gaps = 65/487 (13%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +IK   +   +  ++S L  +   G+++ L  Y+ ++  L R       +  +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + P+ L Y  +IN LC++  + DA  I++ +    ++P    +  ++ G C     D ++
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                       P+                                +++  I  LC++  
Sbjct: 271 QVFNQMAKEGCEPNTV------------------------------TYSTLINGLCDSGR 300

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A++L+  M++  ++P   T +  ++  C +  YEDA R+F  +  +    +  +Y+ 
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 483 LVEGLC-----------------------------------QVEKITEAVEVFCCMSKNG 507
           L+ GLC                                   +  +I  A  V   M +NG
Sbjct: 361 LISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           CS +  ++N +I G C++    KA+ + +     G S    TY  I+ G          L
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L  M   GC  D  +Y  LI    + +K++     FN MV  GL P+  T  +L+ G 
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               +L   +S +  +       +   YN+LI+GL K+   S A  L  +M+ +G  P+ 
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 688 TTHGLLV 694
            T+  ++
Sbjct: 601 VTYTAMI 607



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 131/329 (39%), Gaps = 62/329 (18%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L    N    E LC+ M++E  +PNV     +++     +   + A+ +   
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV-VTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   ++  ++ ++ A+ +E +   +   ++ E+ + G++P+  T   ++E    + 
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGK-VEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGL-----IANSRV------------------ 253
           ++E A +   RM K GC P   T+ ++IKGL     +A+ R+                  
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744

Query: 254 DDSVSI------------------------------------LGEMFDLGIQLELSFYTC 277
            D+VS+                                    LG M   G+  +   Y  
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  L R   ++ A+ +FK M           Y+ELI  LC+  R  +A    E+M++  
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             P D V   ++ GL   G  D  + FL 
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 27/278 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL--ISLVFSFVNHYRVNGAMRVLV 155
           TY  +I  LG  G VEE E L   +  ER+  + + +  + ++ +++   +V  A   L 
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAEL--ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEK-------RGFADFV----FVYKEMVK--------- 195
            M   G + ++  + V++  +  E            D V    F Y+   +         
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754

Query: 196 -AGIVP--NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            A + P  +V   N L+  L    R   A +    M  +G CP+   +  ++  L+    
Sbjct: 755 LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 814

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VD ++ +   M   G ++ L+ Y  +I  LC+ ++ +EA   F+ M      PD++    
Sbjct: 815 VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAV 874

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           LI+ L  +   D   + L  M      P+  ++  + R
Sbjct: 875 LIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 258/543 (47%), Gaps = 16/543 (2%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG----IVPNVDTLNYLLEVLFETN 216
           G    V   N +L A V  +R F+D    +  +        I PN+ T N +L  L    
Sbjct: 115 GCNPGVRSHNALLDAFVRARR-FSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRG 173

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            ++ A+  F  +  +G  P+  T+  ++ G + N+R+D+++ +L EM    +Q +   Y 
Sbjct: 174 DLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYN 233

Query: 277 CIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
            ++    R  + E+A+R++ +++R     P+  TY  +++ LC+     +A D+ E M+ 
Sbjct: 234 ALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVA 293

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFL 391
               P    +  ++ GLC     D +     +  K G V     +N+LL+  C+AG+   
Sbjct: 294 NNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGE 353

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA---YELLGRMVVSSVVPDCATYSAF 448
           A    + M+   I +  S+NI ++ L +   + KA   +ELL +    S+ PD  T+S  
Sbjct: 354 AWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEK--DDSLSPDMVTFSTM 411

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G C+      +L++  +       LD  SYS ++ GLC+  ++ +AV+++  +S +  
Sbjct: 412 IHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSF 471

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +S  +N LI G C   K   AIR+ S    +  S TT TY  ++ GL K ++  +   
Sbjct: 472 KPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASR 531

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
              +ML +GC LDV  Y  LI+ +    K+      +N ++  GL  D      L+HGL 
Sbjct: 532 FTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLC 591

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
              ++   S  ++++   +    + + YN L++G ++ G   +A+ L   +L  G VPD 
Sbjct: 592 SAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDI 651

Query: 688 TTH 690
            ++
Sbjct: 652 ISY 654



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 225/492 (45%), Gaps = 21/492 (4%)

Query: 219 ESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----FDLGIQLELS 273
           ++AL  FRR+    GC P  R+   ++   +   R  D+ +    +    F   I   L 
Sbjct: 101 DAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 160

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  ++  LC    L+ A+ LF  +R   L PD +TY  L++   +N RLD+A  +L++M
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEM 220

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--------HNALLECCCN 385
               + P    +  ++ G    G+F++++   E     V  P        +N +L+  C 
Sbjct: 221 PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQ---LVRDPGASPNLATYNVMLDGLCK 277

Query: 386 AGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G F  A  + E+M A+    D  ++   I  LC + ++  A  +   M+ + +VPD   
Sbjct: 278 LGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVI 337

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y++ + G C      +A + +  +S  S + +  SY+ +++GL     + +A +++  + 
Sbjct: 338 YNSLLKGFCHAGRVGEAWKFWDSMSV-SGIRNVTSYNIMLKGLFDGGMVDKATDLWELLE 396

Query: 505 KNGCSLSSS--SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           K+  SLS    +F+ +I+GLC     +K++++   A +SG      +Y+ ++ GL K  R
Sbjct: 397 KDD-SLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             D + +  ++ ++    +   Y  LI    + +K  D    ++ M +    P   T  +
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+HGL    +    S    +++    +LD + Y  LI GL ++     A  L + +L KG
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575

Query: 683 WVPDATTHGLLV 694
              D   H +L+
Sbjct: 576 LQTDVVMHNILI 587



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/551 (23%), Positives = 235/551 (42%), Gaps = 49/551 (8%)

Query: 87  SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYR 146
           +  +R      TY  M+  L + G+++    L  ++        R    +L+  FV + R
Sbjct: 150 AFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNR 209

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTL 205
           ++ A+ +L  M S   +     +N +LG        F   + V++++V+  G  PN+ T 
Sbjct: 210 LDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGE-FEKAMRVWEQLVRDPGASPNLATY 268

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N +L+ L +    + A D + RM      P+  T+  +I GL  ++ VD +  +  EM  
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM-------------------------RA 300
            G+  ++  Y  ++   C   ++ EA + +  M                         +A
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKA 388

Query: 301 LDLM----------PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
            DL           PD +T+  +I+ LCE    + +  ILE+    G    +  +  ++ 
Sbjct: 389 TDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMIS 448

Query: 351 GLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           GLC+ G+ D++V   E    D     +  +NAL+   C A KF  A  +  +MA+    D
Sbjct: 449 GLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEN---D 505

Query: 407 CD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           C     ++N  I  LC+ E+  +A      M+    + D  TY + + G C+    + AL
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGAL 565

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS-KNGCSLSSSSFNILIYG 521
            ++ Q+  + L  D + ++ L+ GLC   K+ EA ++   M  KN C  +  ++N L+ G
Sbjct: 566 ALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG 625

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                  DKA  L      +G      +Y   + GL    R  + + +L +ML  G    
Sbjct: 626 FYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPT 685

Query: 582 VEAYCILIQSM 592
              + IL++++
Sbjct: 686 AITWNILVRAV 696



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 181/379 (47%), Gaps = 10/379 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           VY EM+K G+VP+V   N LL+      R+  A   +  M   G   N  ++ I++KGL 
Sbjct: 322 VYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGLF 380

Query: 249 ANSRVDDSVSILGEMF--DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
               VD +   L E+   D  +  ++  ++ +I  LC +    +++++ +  R      D
Sbjct: 381 DGGMVDKATD-LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELD 439

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---- 362
           E +Y  +I+ LC++ RLDDA  + E + +    P   ++  ++ G C+  KF +++    
Sbjct: 440 EFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYS 499

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
              E+ C   T  +N L+   C A K+  A     +M ++  + D +++   IR LC ++
Sbjct: 500 QMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDK 559

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS-LVLDSISY 480
           +I  A  L  +++   +  D   ++  + G C     ++A ++  ++  ++    + ++Y
Sbjct: 560 KIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTY 619

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L++G  +     +A  ++  + +NG      S+N  I GLC   +  + ++L +   +
Sbjct: 620 NTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLA 679

Query: 541 SGTSYTTSTYTKIMLGLVK 559
           SG   T  T+  ++  ++K
Sbjct: 680 SGIIPTAITWNILVRAVIK 698



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 113/258 (43%), Gaps = 37/258 (14%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++       R++ A+++   ++   FK +  ++N ++    +  + F+D + VY +M +
Sbjct: 445 SMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASK-FSDAIRVYSQMAE 503

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
               P   T N L+  L +  +   A    R M +KGC  +  T+  +I+GL  + ++D 
Sbjct: 504 NDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDG 563

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD------------- 302
           ++++  ++ D G+Q ++  +  +I  LC   K++EA +L   M+  +             
Sbjct: 564 ALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLM 623

Query: 303 -----------------------LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
                                  L+PD ++Y   I  LC   R  +   +L +M+  G+ 
Sbjct: 624 DGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGII 683

Query: 340 PTDDVFVDIVRGLCEVGK 357
           PT   +  +VR + + G 
Sbjct: 684 PTAITWNILVRAVIKYGP 701



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 104/272 (38%), Gaps = 42/272 (15%)

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+  TY+  +   C   + + A+ +F  +  + L  D I+YS L+ G  +  ++  A+
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNAL 214

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLG 556
            +   M        +  +N L+ G     + +KA+R+   L    G S   +TY  ++ G
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDG 274

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L KL   K+   V  +M+      D+  Y  +I  +     +   A  ++ M+K GLVP 
Sbjct: 275 LCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP- 333

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                                             D  +YN L+ G    G   +A    D
Sbjct: 334 ----------------------------------DVVIYNSLLKGFCHAGRVGEAWKFWD 359

Query: 677 LMLGKGWVPDATTH-----GLLVGSSVGEEID 703
            M   G + + T++     GL  G  V +  D
Sbjct: 360 SMSVSG-IRNVTSYNIMLKGLFDGGMVDKATD 390


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 248/545 (45%), Gaps = 5/545 (0%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++++V V + +L  + + KR       +   M + G  P+V   N ++   F   ++E 
Sbjct: 120 GWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEK 179

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A + F  M  +G  PN  T+  VI GL     VD +  +  +M D G++ +   Y C+I 
Sbjct: 180 AYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIH 239

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                 K +E +++ + M    L PD +TY  L++ LC+N R  +A    + M   G+ P
Sbjct: 240 GYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP 299

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC--CCNAGKFFL--AKCIL 396
              ++  ++ G    G   E  +FL+   G   SP+  +     C  A K  +  A  I 
Sbjct: 300 DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIF 359

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            KM  + ++ D  S+   I  LC+   +  A     +M+   V P+   +S+ V G C +
Sbjct: 360 NKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTV 419

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             +E A  +F +V  Q + +D++ ++ L+  LC   ++ EA  +   M + G   +  S+
Sbjct: 420 GKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISY 479

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N L+ G C+  ++D+A +L  +  S+G      TYT ++ G  K +R  D   +  +ML+
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLM 539

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +G    V  Y  ++  + +  +  +    +  M+ +    D  T   +L+GL   + +  
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDE 599

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
                 +L S    LDS  +NI+I  L K G    A  L   +   G VPD  T+ L+  
Sbjct: 600 AFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659

Query: 696 SSVGE 700
           + + E
Sbjct: 660 NLIEE 664



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 259/562 (46%), Gaps = 7/562 (1%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G VE+   L   M+ +  P       +++        V+ A  V   M   G K     +
Sbjct: 175 GQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTY 234

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N ++   +   + + + V + +EM   G+ P+  T   LL+ L +  R   A   F  M 
Sbjct: 235 NCLIHGYLSTGK-WKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMF 293

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           +KG  P+   + I++ G      + +  S L  M   G+      +  +     ++  +E
Sbjct: 294 RKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIE 353

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           EA+ +F  MR   L PD +++  LI+ LC+  R+DDA      MI  G+TP   VF  +V
Sbjct: 354 EAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLV 413

Query: 350 RGLCEVGKFDESVN-FLE--DKCGYVTSPH-NALLECCCNAGKFFLAKCILEKMADRKI- 404
            GLC VGK++++   F E  D+   V +   N L+   CN G+   A+ +++ M    + 
Sbjct: 414 YGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVR 473

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  S+N  +   C    I +A +LL  MV + + P+  TY+  + G CK    +DA  +
Sbjct: 474 PNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSL 533

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           FR++  + +     +Y+ ++ GL Q  + +EA E++  M  +       ++NI++ GLC 
Sbjct: 534 FREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCK 593

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              VD+A ++     S      + T+  ++  L+K  R +D + + A +   G   DV  
Sbjct: 594 NNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVT 653

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y ++ +++ E+  L +    F+ M K+G  P+   + +L+  L     +      + KL 
Sbjct: 654 YRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLD 713

Query: 645 SDSEVLDSSMYNILINGLWKEG 666
             +  L++S  ++LI+ L+  G
Sbjct: 714 EKNFSLEASTTSMLIS-LYSRG 734



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 221/503 (43%), Gaps = 6/503 (1%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + PN  T + L+       R+E     F  + K G   N      ++KGL    RVD++ 
Sbjct: 86  VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145

Query: 258 SI-LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
            I L  M + G   ++  Y  +I    RE ++E+A  LF  M    + P+ +TY  +I+ 
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC+   +D A  + + MI  G+ P +  +  ++ G    GK+ E V  LE+   +   P 
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
              +  LL+  C  G+   A+   + M  + I  D   + I +        + + +  L 
Sbjct: 266 CITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLD 325

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            MV + V P+   ++       K    E+A+ +F ++  Q L  D +S+  L++ LC++ 
Sbjct: 326 LMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLG 385

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++ +AV  F  M   G + +   F+ L+YGLC + K +KA  L       G       + 
Sbjct: 386 RVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFN 445

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +M  L    R  +   ++  M+  G   +V +Y  L+       ++ + A   +VMV  
Sbjct: 446 TLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN 505

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           GL P+  T   LL G     ++    S   +++        + YN +++GL++ G  S+A
Sbjct: 506 GLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEA 565

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
           + L   M+      D  T+ +++
Sbjct: 566 NELYLNMINSRTKCDIYTYNIIL 588



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 36/311 (11%)

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           +E +   +  + R   S V P+  TYS  +   C++   E     F  +      ++ I 
Sbjct: 68  SERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIV 127

Query: 480 YSKLVEGLCQVEKITEAVEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            S+L++GLC  +++ EA ++    MS+ GC     ++N +I G     +V+KA  L    
Sbjct: 128 ISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEM 187

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQ-----------------------------------RA 563
              G      TYT ++ GL K Q                                   + 
Sbjct: 188 MDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKW 247

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           K+++ +L +M   G   D   Y +L+  + +  + ++  LFF+ M + G+ PD      L
Sbjct: 248 KEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAIL 307

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           LHG A    L  + S ++ +V +    +  ++NI+     K+ +  +A ++ + M  +G 
Sbjct: 308 LHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGL 367

Query: 684 VPDATTHGLLV 694
            PD  + G L+
Sbjct: 368 SPDVVSFGALI 378



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 1/204 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L   G   E   L  NM+  R          ++     +  V+ A ++   +
Sbjct: 548 TYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            S   +L    FN+++GA+++  R   D + ++  +   G+VP+V T   + E L E   
Sbjct: 608 CSKDPQLDSVTFNIMIGALLKGGRK-EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGS 666

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +      F  M K G  PNS     +++ L+    +  +   L ++ +    LE S  + 
Sbjct: 667 LGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSM 726

Query: 278 IIPMLCRENKLEEAIRLFKMMRAL 301
           +I +  R      A  L +  R L
Sbjct: 727 LISLYSRGEYQPHAKSLPEKYRFL 750


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 169/713 (23%), Positives = 300/713 (42%), Gaps = 57/713 (7%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSP-------DHLIRVLDNTNDLSSALKIFKWVS 87
           ++S  + IK  +       + ++R+ L P        H+  VL +     +A+  F+W  
Sbjct: 51  VTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAG 110

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYR 146
            Q  FQH   TY  ++  L    N  +   + + M+K    PN     I L+ SF    R
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNI-LIRSFARTRR 169

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTL 205
            + A+     M     K  +  F +++  +   K G  +  F V+ EM+  G VP    L
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLC--KAGMDEKAFEVFHEMMAMGFVPPDRAL 227

Query: 206 N-YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
           +  ++  L +  R++ A + F +M K G  P++  +  +I GL       +++ +L  M 
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
                     Y  ++  LC+   LE A  LF++M A    P+ + Y  LI+   ++ R+ 
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALL 380
           +A  + ++M+  G  P       ++ GLC+ G F+++    E+     C      +  ++
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 381 ECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G+   A  I++ M A     D  ++   +   C+   + +A +LL  +   S  
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467

Query: 440 PDCATYSAFVLGKCKLCNYEDAL-RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           P+   YS+ V G C   + E  L  +F Q  A +  LD      ++ GLC+  ++ EA  
Sbjct: 468 PNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACR 527

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMR-------------------------------- 526
           +F  M   GC   ++++NILI GLC  R                                
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIG 587

Query: 527 -----KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                +VD+A+++   A S G +     YT +  GL    +    + +  +M+ +G A D
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
             AYC +I  + +  KL+D   FF+ M+  G  P   T  +L+  L     +        
Sbjct: 648 AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707

Query: 642 KLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
            +++  E++ S M Y+ LI+G  K      A  L + M+ +G VP A T   L
Sbjct: 708 SMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASL 760



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 161/665 (24%), Positives = 291/665 (43%), Gaps = 37/665 (5%)

Query: 50  YEAKIQSLRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMIL 104
           Y    + L+  ++P+      LIR    T     A+  F+   I KR +   D +  +IL
Sbjct: 139 YAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFE---IMKRKRCKPDLHTFLIL 195

Query: 105 -----KLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS 159
                K G+  + +  E   + M     P  R    ++V + +   RV  A  V   M  
Sbjct: 196 VDCLCKAGM--DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEK 253

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
            GF      +N ++  +   K G A + + V   M+    VP   T   L+  L +   +
Sbjct: 254 CGFPPDAIAYNTMIDGLA--KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E A + FR M   G  PNS  +  +I G   + R+ ++ S+  EM + G + ++  +T +
Sbjct: 312 ERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+    E+A + F+ M      P+ +TY  +I  L +  R+ +A  I++ MI  G 
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGC 431

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALLECCCNAGKFFLA 392
            P    ++ ++ G C++G+ DE+   L+  DKC   +SP    +++L+   C+ G     
Sbjct: 432 FPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS--SSPNLQLYSSLVNGLCDGGS---V 486

Query: 393 KCILEKMADRKIADCDSWNIP-----IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           +  L+ + ++  A  ++ +       I  LC+   + +A  +  RMV     PD  TY+ 
Sbjct: 487 EKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546

Query: 448 FVLGKCKL--CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
            + G C+      E A  +   +     + D+++Y+ L  GLC++ ++  AV++    S 
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASS 606

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G +    ++  L  GLC   +VD+A+ L       G +   + Y  I+ GL+K+++ +D
Sbjct: 607 RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLED 666

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG-LVPDRETMLSLL 624
                 +M+ +G    V  Y  L+Q++     + +    F  M+  G LV       +L+
Sbjct: 667 ACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALI 726

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           HG     ++         ++S   V  +     L +GL + G T +A  LL  M   G  
Sbjct: 727 HGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786

Query: 685 PDATT 689
           P A T
Sbjct: 787 PHAAT 791



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 232/551 (42%), Gaps = 46/551 (8%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L        ALK+   + + K    T  TY  ++  L  AG +E  E L + M   
Sbjct: 266 MIDGLAKAGHAQEALKVLDNM-LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            +        SL+  F    R+  A  +   M   G++  V    V++  + +    F  
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN-FEQ 383

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
               ++EM++ G  PNV T   +++ L +  R+ +A    + M   GC P+S T+  ++ 
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTC---------------------------- 277
           G     R+D++  +L E+        L  Y+                             
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAET 503

Query: 278 --------IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL--RLDDAN 327
                   II  LC+  +L+EA R+F+ M +    PD  TY  LIN LC +   R++ A 
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECC 383
            +L D+  +G  P    +  +  GLC++G+ D +V  LE+    G+      + AL    
Sbjct: 564 ALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623

Query: 384 CNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C  G+   A  + ++M  +  A D  ++   I  L + +++  A +    M+     P  
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV 683

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKITEAVEVFC 501
           ATY+A V   C   N ++A   F  + A+  ++ S+  Y  L+ G C+  K+  A+++F 
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M   G   ++ +   L  GL    K +KA  L     + G+    +T+T I+ GL K  
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803

Query: 562 RAKDLLVVLAQ 572
            +  LL ++ +
Sbjct: 804 ESGKLLKLVQE 814



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 197/463 (42%), Gaps = 42/463 (9%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  ++  L+A        +I  EM   GI      +  +I    R  + ++A+  F++M
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF-VDIVRGLCEVGK 357
           +     PD  T+  L++CLC+    + A ++  +M+ +G  P D      +VR L +  +
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 358 FDESVNFLE--DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
             E+       +KCG+   P +A+                             ++N  I 
Sbjct: 241 VKEAREVFGQMEKCGF---PPDAI-----------------------------AYNTMID 268

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            L +    ++A ++L  M+  + VP   TY   V   CK    E A  +FR ++A     
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +S+ Y+ L+ G  +  ++ EA  +F  M + G      +  ++I GLC     ++A +  
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TYT I+ GL K+ R  +   ++  M+  GC  D   Y  L+    + 
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS----EVLD 651
            +L + A   + + K    P+ +   SL++GL DG     V   ++ L   S    E LD
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGS---VEKTLDDLFEQSKAAAETLD 505

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +   +I GL K G   +A  +   M+ +G  PDATT+ +L+
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 257/534 (48%), Gaps = 21/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +MV++  +P+V   N L+ V+    R +  +  +++M +K    + 
Sbjct: 53  HEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDV 112

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG Q ++  ++ ++  LC E+++ EA+ LF  
Sbjct: 113 YSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQ 172

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL P    +  IV G+C++G 
Sbjct: 173 M----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGD 228

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++N L   ++  ++      ++A+++     G+   A  +  +M ++ I  D  ++N
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYN 288

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +    +A  LL  M+   + P+  TYSA +    K   + +A  ++ ++  +
Sbjct: 289 CMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR 348

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+Y+ +++G C+  ++  A  +F  M+  GCS    +FN LI G C  +++D  
Sbjct: 349 GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDG 408

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             L      +G    T+TY  ++ G   +      L +  QM+  G   D+     L+  
Sbjct: 409 TELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 468

Query: 592 MSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           + +  KLKD    F  M K+           G+ PD +T   L+ GL +  +        
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELY 528

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V ++  Y+ +INGL K+    +A+ + D M  K + PD  T   LV
Sbjct: 529 KEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 214/479 (44%), Gaps = 18/479 (3%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           + +V  F  ++  +  E R   + V +   MV+ G+ PN  T   +++ + +     SAL
Sbjct: 175 RPNVVTFTTLMNGLCREGR-VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 223 DQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +  R+M +     PN   +  +I GL  + R  D+ ++  EM + GI  +L  Y C+I  
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C   +  EA RL + M    + P+ +TY  LIN   +  +  +A ++ ++M+  G+ P 
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILE 397
              +  ++ G C+  + D + +          SP     N L++  C A +      +L 
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 398 KMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M +   +AD  ++N  I   C   ++  A +L  +M+ S V PD  T +  + G C   
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 457 NYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLCQVEKITEAVEVFCCMSK 505
             +DAL +F+ +    + LD+            +Y+ L+ GL    K  EA E++  M  
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G   ++ +++ +I GLC   ++D+A ++     S   S    T+  ++ G  K  R  D
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
            L +  +M   G   D   Y  LI    +   +      F  M+ +G+ PD  T+ S+L
Sbjct: 594 GLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 234/544 (43%), Gaps = 57/544 (10%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G  P+V T + LL  L   +R+  ALD F +M    C PN  TF  ++ GL 
Sbjct: 134 TFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLC 189

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              RV ++V++L  M + G+Q     Y  I+  +C+      A+ L + M  +  + P+ 
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ L ++ R  DA+++  +M   G+ P    +  ++ G C  G++ E+   L++
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI------------------- 404
                 +P    ++AL+       KFF A+ + ++M  R I                   
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369

Query: 405 -----------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                             D  ++N  I   C  + I    ELL  M  + +V D  TY+ 
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK-- 505
            + G C + +   AL + +Q+ +  +  D ++ + L++GLC   K+ +A+E+F  M K  
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 506 ---------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
                    NG      ++NILI GL    K  +A  L       G    T TY+ ++ G
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +  + DV  +  L+    +  ++ D    F  M + G+V D
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW-KEGLTSQASYLL 675
             T ++L+HG      ++       +++S     D+     ++  LW KE L    + L 
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLE 669

Query: 676 DLML 679
           DL +
Sbjct: 670 DLQM 673



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 198/425 (46%), Gaps = 22/425 (5%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K +V +++ ++  + ++ R  +D   +Y EM + GI P++ T N +++    + R   A 
Sbjct: 246 KPNVVIYSAIIDGLWKDGR-HSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              + M ++   PN  T+  +I   +   +  ++  +  EM   GI      Y  +I   
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++N+L+ A  +F +M      PD  T+  LI+  C   R+DD  ++L +M   GL    
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEK 398
             +  ++ G C VG  + +++  +        P     N LL+  C+ GK   A  + + 
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 484

Query: 399 MADRKI------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           M   K+             D  ++NI I  L    +  +A EL   M    +VP+  TYS
Sbjct: 485 MQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYS 544

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G CK    ++A ++F  + ++S   D ++++ LV G C+  ++ + +E+FC M + 
Sbjct: 545 SMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRR 604

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV----KLQR 562
           G    + ++  LI+G   +  ++ A+ +     SSG  Y  +   + ML ++    +L+R
Sbjct: 605 GIVADAITYITLIHGFRKVGNINGALDIFQEMISSGV-YPDTITIRSMLTVLWSKEELKR 663

Query: 563 AKDLL 567
           A  +L
Sbjct: 664 AVAML 668



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 237/547 (43%), Gaps = 33/547 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI+   + + L  AL  F  ++ +  FQ    T+  ++  L +   V E   L   M + 
Sbjct: 118 LIKCFCSCSKLPFALSTFGKIT-KLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR- 175

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
             PNV     +L+       RV  A+ +L  M   G + +     +  G IV+      D
Sbjct: 176 --PNV-VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPN----QITYGTIVDGMCKIGD 228

Query: 186 FVFVYKEMVK----AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            V     + K    + I PNV   + +++ L++  R   A + +  M +KG  P+  T+ 
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYN 288

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I G  ++ R  ++  +L EM +  I   +  Y+ +I    +E K  EA  L+  M   
Sbjct: 289 CMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR 348

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            ++P+ +TY  +I+  C+  RLD A  +   M   G +P    F  ++ G C   + D+ 
Sbjct: 349 GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDG 408

Query: 362 VNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
              L +  + G V  T+ +N L+   C  G    A  + ++M    +  D  + N  +  
Sbjct: 409 TELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 468

Query: 417 LCENEEIRKAYELLGRMVVS-----------SVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           LC+N +++ A E+   M  S            V PD  TY+  + G      + +A  ++
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELY 528

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           +++  + +V ++I+YS ++ GLC+  ++ EA ++F  M     S    +FN L+ G C  
Sbjct: 529 KEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            +VD  + L       G      TY  ++ G  K+      L +  +M+  G   D    
Sbjct: 589 GRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDT--- 645

Query: 586 CILIQSM 592
            I I+SM
Sbjct: 646 -ITIRSM 651



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 4/174 (2%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ ++ AI L S    S    +   + K+M  +V+++R   ++ +  +M  +    
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           DV ++ ILI+     +KL      F  + K G  PD  T  +LLHGL    ++       
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   + V     +  L+NGL +EG   +A  LLD M+  G  P+  T+G +V
Sbjct: 171 HQMCRPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 220


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 164/674 (24%), Positives = 294/674 (43%), Gaps = 27/674 (4%)

Query: 54  IQSLRHNLSPDHLIRVLDNTN-DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
             +L  +L+P HL  + +N N    +AL  FKW+  Q  F HT  +Y  ++  L   G +
Sbjct: 60  FNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFL 119

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
              E            NVR ++I    S V+ +     + +L +     F LSV  +N +
Sbjct: 120 RAAE------------NVRNSMIK---SCVSSHEARFVLNLLTHHE---FSLSVTSYNRL 161

Query: 173 LGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
              +V  + G  D +  ++K+M+  G+ PN+ + N ++    +   +  A   F  + K 
Sbjct: 162 F--MVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKF 219

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G C +S T+  +I G      + D+  +   M   G       YT +I   C   K++EA
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA 279

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           + LF  M+     PD  TY  L+   CE  +  +A    E+M+  G+ P    +  ++  
Sbjct: 280 LELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDY 339

Query: 352 LCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
            C+VGK DE +  L    + G V+S  P NAL++  C  G    A C+L+ M   K+  +
Sbjct: 340 FCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN 399

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I   C  + + +A  LL +M  + + P+  TY+  + G CK    + A R+  
Sbjct: 400 SRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHH 459

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +     V D  ++   ++ LC++ K+ +A +VF  + +     +   +  LI G C   
Sbjct: 460 LMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAE 519

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K   A  L       G    + T+  ++ GL K  + +D + ++  M        V  Y 
Sbjct: 520 KFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYT 579

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           ILI+ +  ++      +F + M+ +G  P+  T  + +       +L      + K+  +
Sbjct: 580 ILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEE 639

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRR 706
             +LDS +Y++L+N     G    A  +L  M   G  P   T+ +L+   + E+ +   
Sbjct: 640 GILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG 699

Query: 707 FAFDSSSFPDSVSD 720
              D +S   SV +
Sbjct: 700 MGLDLNSTNISVDN 713



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 144/666 (21%), Positives = 272/666 (40%), Gaps = 84/666 (12%)

Query: 99  YCKMILKLGLAGNVEEM---EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
           YCK I +LG A  V E+   EG  +N V         +  +L+  F    +++ A+ +  
Sbjct: 235 YCK-IHELGDAYKVFEIMPQEGCLRNEV---------SYTNLIHGFCEVGKIDEALELFF 284

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M   G    V  + V++ A  E  +      F ++EMV+ GI PNV T   L++   + 
Sbjct: 285 QMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF-FEEMVENGIEPNVYTYTVLIDYFCKV 343

Query: 216 NRIESALDQFRRMHKKG-----------------------------------CCPNSRTF 240
            +++  ++    M +KG                                    CPNSRT+
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I G      +D ++++L +M++  +   L  Y  +I  LC+   ++ A RL  +M  
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
              +PD+ T+   I+CLC+  +++ A+ + E +        + ++  ++ G C+  KF +
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSD 523

Query: 361 S----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA--DRKIADCDSWNIPI 414
           +       L + C   +   N LL+     GK   A  +++ M   D K     ++ I I
Sbjct: 524 AHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK-PTVHTYTILI 582

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             +    +  +A   L +M+ S   P+  TY+AF+   C+     +A  +  ++  + ++
Sbjct: 583 EEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGIL 642

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK---A 531
           LDS  Y  LV     + ++  A  V   M   GC  S  +++IL+  L +  K +K    
Sbjct: 643 LDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL-IFEKYNKEGMG 701

Query: 532 IRLRSLAYS------------------------SGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           + L S   S                         G     +TY+K++ GL K++      
Sbjct: 702 LDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAF 761

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +   M   G +     +  L+ S  +    ++     + M++   +   E+   L+ GL
Sbjct: 762 RLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGL 821

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
            +             L+S     D  ++ +L++GL ++G   + S L D+M   G    +
Sbjct: 822 FEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHS 881

Query: 688 TTHGLL 693
            TH +L
Sbjct: 882 DTHTML 887



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 202/455 (44%), Gaps = 7/455 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L  A  V+    L   M+K+ +   +    + +       +V  A +V  ++
Sbjct: 437 TYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESL 496

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                + +  ++  ++    + ++ F+D   ++K M+  G  PN  T N LL+ L +  +
Sbjct: 497 KEKHAEANEFLYTALIDGYCKAEK-FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +E A+     M K    P   T+ I+I+ ++  S  D +   L +M   G Q  +  YT 
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I   CR+ +L EA  +   ++   ++ D   Y+ L+N      +LD A  +L  M   G
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
             P+   +  +++ L    K+++    L+     ++  +  + +       F +   + E
Sbjct: 676 CEPSRQTYSILLKHLI-FEKYNKEGMGLDLNSTNISVDNANIWK----IADFEIITMLFE 730

Query: 398 KMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           KM ++  + + ++++  I+ LC+ E +  A+ L   M  S + P    +++ +   CKL 
Sbjct: 731 KMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLG 790

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
            +E+ALR+   +   + +    SY  LV GL +     +A E+F  +   G +     + 
Sbjct: 791 MHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWK 850

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +L+ GL     VD+  +LR +   +G    + T+T
Sbjct: 851 VLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHT 885


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 226/476 (47%), Gaps = 5/476 (1%)

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           + +D++ RM  +G  PN   +  VI  L  +  V D+ +I+ ++F+  +  +   YT +I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              CR++ L+ A+++F  M      P+ +TY  LIN LC++ R+++A D++ +MI+ G+ 
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           PT       +  LC++G ++++     D       P    + AL+   C +G   +A  +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377

Query: 396 LEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
             +M+ D    +  ++N  I  L EN  I+ A+ +L  M  +   P+  TY+  + G C 
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + + A+ V   +  +    + ++Y+ +++G C     T A+ +   M   GC     S
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI G C + K++ A  L +     G      TYT ++ G  K ++      +L  M 
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             GC  +V+ Y +LI  +++QN          VM++ G+ P+  T  +++ GL       
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           L     NK++    + +   Y+ LI  L +EG   +A  L   +   G +PD  T+
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 242/520 (46%), Gaps = 14/520 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G + ++ ++N V+ A+ ++    AD   + K++ ++ + P  DT  Y   +L    
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDG-NVADAETIMKKVFESEMSP--DTFTYTSMILGHCR 262

Query: 217 R--IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           +  ++SAL  F +M K+GC PN+ T+  +I GL  + RV+++  ++ EM   GI    + 
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP--TA 320

Query: 275 YTCIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           +TC  P+  LC     E+A RLF  M+     P+  TY  LI+ LC +  L  A  +   
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 380

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGK 388
           M   G+ P    +  ++  L E  +   +   L     + C      +N +++  C  G 
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 389 FFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  ++  M  R   A+  ++N  I+  C++     A  +L  M      PD  +Y+ 
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK+   E A  +F ++    L  + ++Y+ L++G C+ EK+  A  +   M ++G
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  +  ++N+LI+GL        A  L  +    G      TYT ++ GL K       L
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M+ +GC  ++  Y  LI+++ ++ K+++    F  + + GL+PD  T + ++   
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
               ++    + + +++          Y +LI GL  E L
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 132/619 (21%), Positives = 237/619 (38%), Gaps = 68/619 (10%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           +DL SAL++F  ++ +    +T  TY  +I  L  +G V E   L + M+          
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTV-TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF-VFVYKE 192
               + +  +      A R+ V+M + G + +V  +  ++  +     G     + ++  
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS--GLLKVAIGLFHR 380

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ PN  T N L+ +L E  RI+ A      M + GC PN  T+  +IKG      
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              ++ ++  M   G    L  Y  II   C       A+R+  +MR     PDE +Y E
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DK 368
           LI   C+  +++ A  +  +M+  GL P +  +  ++ G C+  K D + + LE      
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C      +N L+        F  A+ + + M +  I  +  ++   I  LC+N     A 
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI--------- 478
           E+  +M+    +P+  TYS+ +    +    E+A  +F ++    L+ D I         
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680

Query: 479 --------------------------SYSKLVEGL--------------------CQVEK 492
                                     +Y  L++GL                    C    
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 740

Query: 493 ITEAVEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
            T   +    MS         LS    N L+  L    +  +A  L     S G      
Sbjct: 741 QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQE 800

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y  ++  L++++     + V   M  +GC + +  Y  LI ++ + ++ K+  + F  M
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860

Query: 609 VKAGLVPDRETMLSLLHGL 627
           +     PD      L+ GL
Sbjct: 861 LMRTWNPDDVVQAVLIDGL 879



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/487 (20%), Positives = 195/487 (40%), Gaps = 65/487 (13%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +IK   +   +  ++S L  +   G+++ L  Y+ ++  L R       +  +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + P+ L Y  +IN LC++  + DA  I++ +    ++P    +  ++ G C     D ++
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                       P+                                +++  I  LC++  
Sbjct: 271 QVFNQMAKEGCEPNTV------------------------------TYSTLINGLCDSGR 300

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A++L+  M++  ++P   T +  ++  C +  YEDA R+F  +  +    +  +Y+ 
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 483 LVEGLC-----------------------------------QVEKITEAVEVFCCMSKNG 507
           L+ GLC                                   +  +I  A  V   M +NG
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           CS +  ++N +I G C++    KA+ + +     G S    TY  I+ G          L
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L  M   GC  D  +Y  LI    + +K++     FN MV  GL P+  T  +L+ G 
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               +L   +S +  +       +   YN+LI+GL K+   S A  L  +M+ +G  P+ 
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 688 TTHGLLV 694
            T+  ++
Sbjct: 601 VTYTAMI 607



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 62/330 (18%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLV 155
            TY  +I  L    N    E LC+ M++E  +PNV     +++     +   + A+ +  
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV-VTYTAMIDGLCKNGSTSLALEMFN 624

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M   G   ++  ++ ++ A+ +E +   +   ++ E+ + G++P+  T   ++E    +
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGK-VEEAENLFAELERHGLIPDEITYVKMIEAYIMS 683

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGL-----IANSRV----------------- 253
            ++E A +   RM K GC P   T+ ++IKGL     +A+ R+                 
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 743

Query: 254 -DDSVSI------------------------------------LGEMFDLGIQLELSFYT 276
             D+VS+                                    LG M   G+  +   Y 
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  L R   ++ A+ +FK M           Y+ELI  LC+  R  +A    E+M++ 
Sbjct: 804 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 863

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
              P D V   ++ GL   G  D  + FL 
Sbjct: 864 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 27/278 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL--ISLVFSFVNHYRVNGAMRVLV 155
           TY  +I  LG  G VEE E L   +  ER+  + + +  + ++ +++   +V  A   L 
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAEL--ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEK-------RGFADFV----FVYKEMVK--------- 195
            M   G + ++  + V++  +  E            D V    F Y+   +         
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 754

Query: 196 -AGIVP--NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            A + P  +V   N L+  L    R   A +    M  +G CP+   +  ++  L+    
Sbjct: 755 LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 814

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VD ++ +   M   G ++ L+ Y  +I  LC+ ++ +EA   F+ M      PD++    
Sbjct: 815 VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAV 874

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           LI+ L  +   D   + L  M      P+  ++  + R
Sbjct: 875 LIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 241/514 (46%), Gaps = 8/514 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIES---ALDQFRRMHKKGCCPNSRTFEIVIK 245
           ++ +M +    PN+ T N LL  L  +N   S   + + F+   K G  PN  TF I+I 
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G  +++  ++++ ++ +M + G   +   Y  ++  LC+ ++L +   L   M+   L P
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +  TY  L++  C+   L +A +++E M   G+ P    +  +VRGLC+ GK DE+V   
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCEN 420
           +    +   P    +N L++ C        A  ++E+M  R + +   + NI I+W C  
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            +I +A  ++ +MV S   PDC TY+  + G CK     +A ++  ++  + L LD+ + 
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+  +C  +++ +A  +     K G  L   ++  LI G     + D+A++L      
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           +G   T  TY  I+ GL    +    +  L ++L +G   D     I+I     +  ++ 
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              F N MV+  L PD  T   LL GL     L    +  N  +S  + +D+  YNI+I+
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              KE     A  L+  M GK   PD  T+  +V
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIV 673



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 230/524 (43%), Gaps = 44/524 (8%)

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF---VYKEMVKAGIVPNVDTLNYL 208
           ++   M    F+ ++   N +L A+V      +  VF   V+++ VK G+ PNV+T N L
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHS-LVFSREVFQDAVKLGVQPNVNTFNIL 217

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG- 267
           +      N  E AL    +M + GCCP++ T+  V+  L   S++     +L +M + G 
Sbjct: 218 IHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGL 277

Query: 268 --------------------------IQL--------ELSFYTCIIPMLCRENKLEEAIR 293
                                     I+L        ++  Y  ++  LC E K++EA+R
Sbjct: 278 FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L   M +  L+PD +TY  LI+   E+   D A  ++E+M   G+         +++  C
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFC 397

Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCD 408
             GK DE+ N +        SP    +N ++   C AGK   A  ++++M  + +  D  
Sbjct: 398 TEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTF 457

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           + N  +  +C  +++  AY L  +      + D  TY   ++G  K    + AL+++ ++
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM 517

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               +V   I+Y+ ++ GLC   K  +AV+    + + G     S+ NI+I+G C    V
Sbjct: 518 KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAV 577

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +KA +  +            T   ++ GL +    +  L +    + +G  +D   Y I+
Sbjct: 578 EKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNII 637

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           I S  ++ +L+D       M    L PDR T  +++ GL    +
Sbjct: 638 ISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGR 681



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 214/483 (44%), Gaps = 28/483 (5%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           YCK+      A  +E M G      K   P+V     ++V    +  +++ A+R+   M 
Sbjct: 291 YCKLKWLKEAAEVIELMTG------KGMLPDVW-TYNTMVRGLCDEGKIDEAVRLRDKME 343

Query: 159 SGGFKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           S  FKL  DV  +N ++    E +   A F  V +EM   G+  N  T N +++      
Sbjct: 344 S--FKLVPDVVTYNTLIDGCFEHRGSDAAFKLV-EEMKARGVKENGVTHNIMIKWFCTEG 400

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +I+ A +   +M + G  P+  T+  +I G     ++ ++  ++ EM   G++L+     
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  +C E +L++A  L    R    + DE+TY  LI    ++ + D A  + E+M   
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT--SPHNALLECCCNAGKFFLA 392
           G+  T   +  I+RGLC  GK D++V+ L +  + G V   S  N ++   C  G    A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                KM +  +  D  + NI +R LC    + K   L    +      D  TY+  +  
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISS 640

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK    EDA  +  ++  ++L  D  +Y+ +V GL +  +  EA ++    ++ G  + 
Sbjct: 641 FCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVK 700

Query: 512 SSS-----------FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
           +             ++  I  LC   K   A++L   A   G S    TY K+M GL+K 
Sbjct: 701 TQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKR 760

Query: 561 QRA 563
           +++
Sbjct: 761 RKS 763



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 197/448 (43%), Gaps = 14/448 (3%)

Query: 293 RLFKMMRALDLMPDELTYEELINCLCEN---LRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           ++F  M+ L   P+ LT   L+N L  +     L  + ++ +D + +G+ P  + F  ++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI- 404
            G C     +E++  +     Y   P    +N +L   C   +    + +L +M +  + 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            + +++NI +   C+ + +++A E++  M    ++PD  TY+  V G C     ++A+R+
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             ++ +  LV D ++Y+ L++G  +      A ++   M   G   +  + NI+I   C 
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             K+D+A  +      SG S    TY  ++ G  K  +  +   ++ +M  +G  LD   
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
              L+ +M  + +L D         K G + D  T  +L+ G     Q         ++ 
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS 704
               V     YN +I GL   G T QA   L+ +L KG VPD +T  +++     E    
Sbjct: 519 ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVE 578

Query: 705 RRFAF-----DSSSFPDSVS-DILAEGL 726
           + F F     + S  PD  + +IL  GL
Sbjct: 579 KAFQFHNKMVEHSLKPDIFTCNILLRGL 606



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 7/267 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  MI     AG + E   +   M ++        L +L+ +     +++ A  + +  
Sbjct: 423 TYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA 482

Query: 158 NSGGFKL-SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
              G+ L  V    +++G   +E+   A  + +++EM + GIV  + T N ++  L  + 
Sbjct: 483 RKRGYILDEVTYGTLIMGYFKDEQADRA--LKLWEEMKETGIVATIITYNTIIRGLCLSG 540

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           + + A+D+   + +KG  P+  T  I+I G      V+ +     +M +  ++ ++  +T
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDI--FT 598

Query: 277 CIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           C I +  LCRE  LE+ + LF    +     D +TY  +I+  C+  RL+DA D++ +M 
Sbjct: 599 CNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEME 658

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDES 361
              L P    +  IV GL + G+ +E+
Sbjct: 659 GKNLEPDRYTYNAIVTGLTKAGRTEEA 685



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 80/187 (42%), Gaps = 20/187 (10%)

Query: 164 LSVDVF--NVVLGAIVEE---KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           L  D+F  N++L  +  E   ++G      ++   +  G   +  T N ++    +  R+
Sbjct: 592 LKPDIFTCNILLRGLCREGMLEKGLT----LFNTWISKGKPMDTVTYNIIISSFCKERRL 647

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS----- 273
           E A D    M  K   P+  T+  ++ GL    R +++  +  +  + G Q++       
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPE 707

Query: 274 ------FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
                  Y+  I  LC + K ++A++LF+      +  ++ TY +L++ L +  +     
Sbjct: 708 LGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTT 767

Query: 328 DILEDMI 334
            +L  M+
Sbjct: 768 SLLPFMV 774


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 160/714 (22%), Positives = 306/714 (42%), Gaps = 68/714 (9%)

Query: 40  DMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTADT 98
            +++ +Q+        S+  N+ P H+ +VL  T D S  AL+ F ++ + + F H+  +
Sbjct: 46  QIVRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTAS 105

Query: 99  YCKMILKLGLAGNV-------------------EEMEGLCQNMVKERYPNVREALISLVF 139
           +C +I  L L  N+                   +  E   ++  K ++ +       L+ 
Sbjct: 106 FCILIHSL-LQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSS-SSGFDMLIQ 163

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
            +V + RV   + V+  M   G    V   + +L A+    R F   + ++  +V AG+ 
Sbjct: 164 HYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALAR-IRKFRQVLELFDTLVNAGVK 222

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+      +++ L E      A +   +    GC  +  T+ + I GL  + RV ++V +
Sbjct: 223 PDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEV 282

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
              + + G++ +L  Y  ++  LCR  + E  + +   M  L  +P E     LI  L +
Sbjct: 283 KRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIK 342

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE------------------S 361
              ++ A ++L  +  +G+ P   V+  ++  LC+ GK +E                  +
Sbjct: 343 MGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVT 402

Query: 362 VNFLED-------------------KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMA 400
              L D                   +CG   +   +N+++ C C  GK  +A+ + ++M 
Sbjct: 403 YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMV 462

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           D+ +     ++   I   C++  + KA++L   M    + P+  T++A + G C++    
Sbjct: 463 DKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMA 522

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A ++F ++    ++ + ++Y+ L+EG C+    T A E+   M K G S  + ++  LI
Sbjct: 523 EASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLI 582

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GLC   +V +A    +  +          YT ++ G  K  R K+ LV   +M+  G  
Sbjct: 583 AGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQ 642

Query: 580 LDVEAYCILIQSMSEQNKLKDCALF--FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           +D+ +Y +LI     QN   D  LF     M   G+ PD      L+ G      L    
Sbjct: 643 MDLVSYAVLISGALNQN---DRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAF 699

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
                ++ +  V +S  Y  L+NGL+K G  ++A  L   ML    +P+  T+G
Sbjct: 700 EFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYG 753



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 220/509 (43%), Gaps = 9/509 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM++ G VP+   ++ L+E L +   IE A +   ++ K G  PN   +  +I  L    
Sbjct: 320 EMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTG 379

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +++++  +   M + G+      YT +I    R  KL+ A   F  M    +     +Y 
Sbjct: 380 KLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYN 439

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +INC C+  ++  A  + ++M+  GL PT   +  ++ G C+ G   ++     +  G 
Sbjct: 440 SMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGK 499

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKA 426
             +P+     AL+   C   K   A  + ++M + KI   + ++N+ I   C      +A
Sbjct: 500 GIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRA 559

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           +ELL  M+   + PD  TY   + G C      +A      +  +   LD + Y+ L++G
Sbjct: 560 FELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQG 619

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI-RLRSLAYSSGTSY 545
            C+  +I EA+     M   G  +   S+ +LI G   + + D+ +  L    +  G   
Sbjct: 620 FCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG--ALNQNDRILFELLREMHGKGMQP 677

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               YT ++ G +K    K        M+ EG   +   Y  L+  + +   + +  L F
Sbjct: 678 DNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLF 737

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M+    +P+  T    L  L     +       N ++  S   ++  YNILI G  + 
Sbjct: 738 KRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS-FANTVTYNILIRGYCQI 796

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G   +A+ LLD+M+G G VPD  T+   +
Sbjct: 797 GKFQEAAKLLDVMIGIGMVPDCITYSTFI 825



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 201/457 (43%), Gaps = 16/457 (3%)

Query: 180 KRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           +R   D  F Y  +M++ GI   V + N ++    +  +++ A   F+ M  KG  P   
Sbjct: 412 RRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVA 471

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +I G   +  V  +  +  EM   GI      +T +I  LC+ NK+ EA +LF  M
Sbjct: 472 TYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEM 531

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
             L ++P+E+TY  LI   C       A ++L++MI  GL+P    +  ++ GLC  G+ 
Sbjct: 532 VELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRV 591

Query: 359 DESVNFLEDKCGYVTSPHNALLECC--------CNAGKFFLAKCILEKMADRKIA-DCDS 409
            E+  F+ D    +   H  L E C        C  G+   A    ++M  R +  D  S
Sbjct: 592 SEAKEFIND----LHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVS 647

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           + + I     N+  R  +ELL  M    + PD   Y+  + G  K  N + A   +  + 
Sbjct: 648 YAVLISGAL-NQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            +  V +S++Y+ LV GL +   + EA  +F  M       +  ++   +  L     ++
Sbjct: 707 GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNME 766

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A++L + A   G+   T TY  ++ G  ++ + ++   +L  M+  G   D   Y   I
Sbjct: 767 NALQLHN-AMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFI 825

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
               ++  +      +  M++ GL PDR     L+H 
Sbjct: 826 YEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHA 862



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/445 (22%), Positives = 201/445 (45%), Gaps = 7/445 (1%)

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           S +  +I    +  ++ + + +  +MR   L+P+  T   L+N L    +     ++ + 
Sbjct: 156 SGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDT 215

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFD---ESVNFLE-DKCGYVTSPHNALLECCCNAGK 388
           ++  G+ P   ++  +V+ LCE+  F+   E +N  E + C      +N  +   C + +
Sbjct: 216 LVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKR 275

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
            + A  +   + ++ + AD  ++   +  LC  +E     E++  M+    VP  A  S 
Sbjct: 276 VWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSG 335

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G  K+ + E A  +  +V    +V +   Y+ ++  LC+  K+ EA  +F  M++ G
Sbjct: 336 LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERG 395

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            + +  ++ ILI G     K+D A    +     G S T  +Y  ++    K  + K   
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAE 455

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           ++  +M+ +G    V  Y  LI    +   +      ++ M   G+ P+  T  +L+ GL
Sbjct: 456 LLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGL 515

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
              +++   S   +++V    + +   YN+LI G  +EG T++A  LLD M+ KG  PD 
Sbjct: 516 CQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDT 575

Query: 688 TTHGLLVGS--SVGEEIDSRRFAFD 710
            T+  L+    S G   +++ F  D
Sbjct: 576 YTYRPLIAGLCSTGRVSEAKEFIND 600



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 210/461 (45%), Gaps = 12/461 (2%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G ++  E L + MV +          SL+  +     V  A ++   M   G   +   F
Sbjct: 449 GKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTF 508

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             ++  + +  +  A+   ++ EMV+  I+PN  T N L+E          A +    M 
Sbjct: 509 TALICGLCQINK-MAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMI 567

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           KKG  P++ T+  +I GL +  RV ++   + ++     +L+   YT ++   C+E +++
Sbjct: 568 KKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIK 627

Query: 290 EAIRLFKMMRALDLMPDELTYEELIN-CLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           EA+   + M    L  D ++Y  LI+  L +N R+    ++L +M   G+ P + ++  +
Sbjct: 628 EALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI--LFELLREMHGKGMQPDNVIYTIL 685

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRK 403
           + G  + G   ++  F     G    P    + AL+     AG    AK + ++M     
Sbjct: 686 IDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEA 745

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           I +  ++   +  L +   +  A +L   M+  S   +  TY+  + G C++  +++A +
Sbjct: 746 IPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-NTVTYNILIRGYCQIGKFQEAAK 804

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +   +    +V D I+YS  +   C+   +  A++++ CM + G       FN LI+  C
Sbjct: 805 LLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACC 864

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           +  ++D+A++LR+     G   T STY  +M+ L   QRA+
Sbjct: 865 LNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLA--QRAR 903



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 35/253 (13%)

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           S  +  L++   Q +++ + V V   M   G      + + L+  L  +RK  + + L  
Sbjct: 155 SSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFD 214

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI------- 589
              ++G       YT ++  L +L+       ++ Q    GC+L +  Y + I       
Sbjct: 215 TLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSK 274

Query: 590 ---------QSMSEQNKLKD----CALFFNV---------------MVKAGLVPDRETML 621
                    +S+ E+    D    C L   +               M++ G VP    + 
Sbjct: 275 RVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVS 334

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            L+ GL     +      +NK+     V +  +YN +IN L K G   +A  L  +M  +
Sbjct: 335 GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAER 394

Query: 682 GWVPDATTHGLLV 694
           G  P+  T+ +L+
Sbjct: 395 GLNPNDVTYTILI 407



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 49/241 (20%), Positives = 109/241 (45%), Gaps = 20/241 (8%)

Query: 61  LSPDHLIRVL-----DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEM 115
           + PD++I  +       + +L  A + F ++ I + +   + TY  ++  L  AG V E 
Sbjct: 675 MQPDNVIYTILIDGFIKSGNLKKAFE-FWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEA 733

Query: 116 EGLCQNM-VKERYPNVREALISLVFS-FVNHYRVNGAMRVLVNMNS----GGFKLSVDVF 169
           + L + M V E  PN       + +  F++H    G M   + +++    G F  +V  +
Sbjct: 734 KLLFKRMLVGEAIPN------HITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTV-TY 786

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N+++    +  + F +   +   M+  G+VP+  T +  +    +   +++A+D +  M 
Sbjct: 787 NILIRGYCQIGK-FQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECML 845

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           ++G  P+   F  +I     N  +D ++ +  +M   G++   S Y  ++  L +  +L 
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLT 905

Query: 290 E 290
           +
Sbjct: 906 Q 906


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 219/463 (47%), Gaps = 43/463 (9%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT +I  LC+  +LE+A+     M +    PD  TY  +I+ LC   RL +A   LE+M 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
              LTP    +  ++ GLC+ G+ DE+V                                
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAV-------------------------------A 102

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +L KM  + +    ++N  I  LC+ E   +AY+LL  MV S  +PD  TY+  + G CK
Sbjct: 103 LLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-CSLSSS 513
               +DALRVF Q+ A+    D ++YS L++GLC+  ++ EA+++F  M K+G C  ++ 
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI G C M K+D+A+ L      +G+S    TYT +M G  KL R  D   +L QM
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G   DV  +  L+  +  +N+L D       M +    P   T  ++L G    +QL
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342

Query: 634 HLVSS-GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                  + ++     V+    +NI+I GL K   +S+A  L++    +   PD   +  
Sbjct: 343 EEARKFMLEEMDCPPNVVS---FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 693 LV-GSSVGEEIDS-----RRFAFDSSSFPDSVS-DILAEGLGN 728
           ++ G    +++D      R+   +    P+S++   L  GL N
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN 442



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 235/487 (48%), Gaps = 14/487 (2%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T   L++ L +  R+E AL    +M  KG  P+  T+  VI  L   +R+ ++   L EM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            +  +   +  YT +I  LC+  +++EA+ L   MR    +P  +TY  LI+ LC+  R 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
            +A D+LE+M+  G  P    +  ++ G C+  K D+++   E        P    ++ L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 380 LECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           ++  C  G+   A  +  +M  +   + +  ++N  I   C   ++ +A  LL RM  + 
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             PD  TY+  + G CKL   +DA  +  Q++ + L  D ++++ L++GLC+  ++++AV
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +   M +  CS +  ++N ++ G C   ++++A +   +           ++  ++ GL
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGL 369

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPD 616
            K+ R+ + + ++ +     C  DV  Y  +I  +  + K+ + C ++  ++ + G +P+
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +L+ GL +   L      I K      V +   YN+LI+   K      A  LLD
Sbjct: 430 SITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLD 485

Query: 677 LMLGKGW 683
            M+ +G+
Sbjct: 486 DMVQRGF 492



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 229/488 (46%), Gaps = 21/488 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+       R+  A+  L  M S GF   V  +  V+ A+  E R      F+ +EM  
Sbjct: 16  SLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL-EEMAN 74

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + PNV T   L++ L +  R++ A+    +M KK C P + T+  +I GL    R  +
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASE 133

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L EM   G   ++  YT +I   C+  K ++A+R+F+ + A    PD +TY  LI+
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 316 CLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
            LC+  RL +A D+   MI  G   P    +  ++ G C +GK DE++N LE      +S
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           P    +  L+   C   +   A  +L +M  + +  D  ++   +  LC    +  A  +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           LG M   S  P   TY+  + G C+    E+A +    +       + +S++ ++ GLC+
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCK 371

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTS 548
           V + +EA+E+     +  C+     +  +I GLC  +KVD+A R+ R +    G    + 
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 549 TYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           TY+ ++ GL     L RA+         + +GC  ++  Y +LI +  + N+ +D     
Sbjct: 432 TYSTLVTGLCNAGMLDRARGY-------IEKGCVPNIGTYNLLIDAFRKANRDEDARELL 484

Query: 606 NVMVKAGL 613
           + MV+ G 
Sbjct: 485 DDMVQRGF 492



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 200/448 (44%), Gaps = 41/448 (9%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           N L  A K  + ++  +       TY  +I  L   G V+E   L   M K+  P     
Sbjct: 60  NRLHEARKFLEEMA-NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA-VT 117

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
             SL+       R + A  +L  M   G    +  +  ++    + K+   D + V++++
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS-DDALRVFEQL 176

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSR 252
           V  G  P+V T + L++ L +  R++ A+D F RM K G C PN+ T+  +I G     +
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D+++++L  M + G   ++  YT ++   C+  +L++A  L   M    L PD +T+  
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++ LC   RL DA  IL +M     +PT   +  I+ G C   + +E+  F+ ++   +
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEE---M 353

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
             P N +                             S+NI IR LC+     +A EL+  
Sbjct: 354 DCPPNVV-----------------------------SFNIMIRGLCKVNRSSEAMELVEE 384

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL-DSISYSKLVEGLCQVE 491
                  PD   Y+  + G C+    ++A RV+R++  +   L +SI+YS LV GLC   
Sbjct: 385 ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG 444

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILI 519
            +  A        + GC  +  ++N+LI
Sbjct: 445 MLDRARGYI----EKGCVPNIGTYNLLI 468



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 2/263 (0%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +  +S   D  TY++ + G CK+   E AL    ++ ++    D  +Y+ ++  LC   +
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA +    M+    + +  ++ +LI GLC   +VD+A+ L S         T  TY  
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNS 120

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL K +RA +   +L +M+  GC  D+  Y  LI    +  K  D    F  +V  G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGLWKEGLTSQA 671
             PD  T   L+ GL    +L        +++     + +++ YN LI+G  + G   +A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             LL+ M   G  PD  T+  L+
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLM 263


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 171/714 (23%), Positives = 310/714 (43%), Gaps = 39/714 (5%)

Query: 28  SCANTIP-LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWV 86
           S  N  P L S+   I S    ++ +++  L   L P H++ +L    +  S L+ F W+
Sbjct: 42  STTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWI 101

Query: 87  SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHY 145
           S +K F+H    +  M+ +L                V++R +       I ++ S  N  
Sbjct: 102 SRRKFFKHDMSCFVSMLNRL----------------VRDRLFAPADHVRILMIKSCRNEG 145

Query: 146 RVNGAMRVLVNMNSG-GFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVD 203
            V    + L  +NS   F  ++  F  +L  I   K    D    +Y +M+ +GI P++ 
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLL--IQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N ++ +L +  R++ A      + +    PN+ T+  +I G   N  +D + ++   M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G       Y+ +I  LC E +LEEA+ + + M    + P   TY   +  LC+    
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNAL 379
            +A ++L  M   G  P    F  ++ GL   GKF+ ++      L D     T  +NAL
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 380 LECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +   C  G+F  A  I + M +   +    ++N  I+  C   +I+KA  +  +M+ +  
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P+  TY+  + G CK  N  +A+R+   +    L  D+ +Y++L+ G  +  K+  A  
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +F  M ++G S +  ++  +I G   + KVD A+ L      SG   ++ TY  ++ G  
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K     +      +M+ +G   +V  Y   I  +    +       F+ M K    P+  
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 619 TMLSLLHGL-----ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
           T  SL++GL     A+ ++++ + + +     +  V     Y  L+ GL  EG   +A  
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV---DTYTTLVKGLCGEGRCYEADQ 680

Query: 674 LLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRR---FAFDSSSFPDSVSDILA 723
           L+  M  KG  P    +  LL+G     +++S     ++ D+  F   +SD  A
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKA 734



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 249/598 (41%), Gaps = 47/598 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T+  MI  L   G V+E + +  ++ + + YPN      SL+     ++ ++ A  +   
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAF-TYTSLILGHCRNHNLDLAFAMFDR 262

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   ++ ++  +  E R   + + + +EMV+ GI P V T    L  L +  
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGR-LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               A++   +M K+GC PN +TF  +I GL  + + + ++ +  +M   G+      Y 
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC E + E A  +FK M +   +P   TY E+I C C    +  A  I + M+  
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G +P    +  ++ G C+ G  + ++  LE   G    P                     
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP--------------------- 480

Query: 397 EKMADRKIADCDSWNIP--IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                      D+W     I       ++  A  L   M+   + P+  TY+A + G   
Sbjct: 481 -----------DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC-MSKNGCSLSSS 513
           L   +DAL +F ++     +  S +Y+ ++ G  +   I+EA E FC  M K G   +  
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA-ENFCGKMVKQGLLPNVI 588

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD--LLVVLA 571
           ++   I GLC   +   A ++              TY+ ++ GL +  RA+D  +  +LA
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           ++   GC  +V+ Y  L++ +  + +  +       M K GL P  E   +LL G     
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708

Query: 632 QLHLVSSGINKLVSDSEV---LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           +   V S +N   S   +   L  S Y  LI  L KE    +A  +   ML K W  D
Sbjct: 709 K---VESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/535 (22%), Positives = 231/535 (43%), Gaps = 39/535 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L   G +EE   + + MV++   P V    I LV S  +    + A+ +L  
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV-SLCDAGCSSEAVELLGK 332

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   ++  F  ++  +  + + F   + +Y +M+  G+VP   T N L+  L    
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGK-FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEG 391

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R E+A   F+ M   G  P+++T+  +IK       +  ++ I  +M   G    +  Y 
Sbjct: 392 RFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYN 451

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C++  L  A+RL ++M+   L PD  TY ELI+      +L+ A  +   M+  
Sbjct: 452 TLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G++P    +  I+ G   + K D+++                                + 
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDAL-------------------------------ALF 540

Query: 397 EKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            KM +   +    ++N+ I    +   I +A    G+MV   ++P+  TY++F+ G C+ 
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK---NGCSLSS 512
                A ++F ++  ++   +  +YS L+ GLCQ E   E  E++  +++    GC  + 
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ-EGRAEDAEMYNLLARLTHYGCEPNV 659

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++  L+ GLC   +  +A +L       G   +   Y  +++G  K  + +  L +   
Sbjct: 660 DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYS 719

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           M   G  L +  Y  LI ++ ++N +++    F  M++     D      LL GL
Sbjct: 720 MDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 9/268 (3%)

Query: 57  LRHNLSPDHLIR--VLDNTNDLSS---ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           + H +SP+H+    ++D   +L+    AL +F W  ++     ++ TY  MI       +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALF-WKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 112 VEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           + E E  C  MVK+   PNV     S +     + R   A ++   M    +  ++  ++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVI-TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYS 626

Query: 171 VVLGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            ++  + +E R   A+   +   +   G  PNVDT   L++ L    R   A      M 
Sbjct: 627 SLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQ 686

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           KKG  P+   +  ++ G   N +V+ +++I   M  LG QL LS Y  +I  LC+EN +E
Sbjct: 687 KKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIE 746

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCL 317
           EA  +F+ M       DE+ +  L++ L
Sbjct: 747 EAQCIFQTMLEKHWNSDEVAWTVLLDGL 774


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/628 (23%), Positives = 289/628 (46%), Gaps = 12/628 (1%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L    +++ L    +LSS L  F  ++    FQHTA TY  MI +LG    ++ ++ + Q
Sbjct: 39  LQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQ 98

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M  +      +  I ++  +        A+++   +   G K +V ++N +L A++ E 
Sbjct: 99  QMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSEN 158

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           + F     +Y  M K G++PNV T N LL+ L + +R+++A   F  M  KGC P++ T+
Sbjct: 159 K-FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTY 217

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L    ++DD+  + G       +  +  Y  +I  +C+E ++E AI+L   M  
Sbjct: 218 TTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD 272

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + P+ ++Y  +IN LC +  ++ A  +   M + G       F  +++G    GK  E
Sbjct: 273 NGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE 332

Query: 361 SVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIR 415
           +++     ++D C      +N L+   C+ G    A  + ++M     + +  +++I I 
Sbjct: 333 ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
              ++ ++  A E   RM+     P+  TY+  V   CK   ++ A  +  +++ +    
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           ++I+++  ++GLC   ++  A+++   M  +GC  + +++N L+  L  M K ++A  L 
Sbjct: 453 NTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               +        TY  ++ G  +     + L +  + LV G A D   Y  +I +  +Q
Sbjct: 513 QEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572

Query: 596 NKLKDCA-LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            K+K  A L   V       PD  T  SL+ G  +   +    + ++K ++     + + 
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKG 682
           +N L+   +         ++LD +L KG
Sbjct: 633 WNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/544 (21%), Positives = 237/544 (43%), Gaps = 14/544 (2%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           NS  F+ +   + V++  +  E     D V ++ ++M   GI    D    ++       
Sbjct: 66  NSNAFQHTASTYRVMIERLGRECE--MDMVQYILQQMKMDGINCCEDLFICIINGYKRVG 123

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E AL  F R+ + GC P  R +  ++  L++ ++      +   M   G+   +  Y 
Sbjct: 124 SAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN 183

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC+ ++++ A +LF  M      PD +TY  +++ LC+  ++DDA ++       
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR---- 239

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
              P+  V+  ++ G+C+ G+ + ++  L +       P    ++ ++   C +G   LA
Sbjct: 240 -FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +  +M  R   A+  ++   I+      ++ +A +L   M+     P+   Y+  + G
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C   + E+AL+V  Q+     + +  +YS L++G  +   +  A E +  M  +GC  +
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++  ++  LC     D+A  L       G +  T T+   + GL    R +  + +L 
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   GC  ++  Y  L+ ++   NK ++    F  +    L P+  T  ++L+G +   
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG-KGWVPDATTH 690
            +        K +      DS  YN +I+   K+G    A+ L++ +   K W PD  T+
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598

Query: 691 GLLV 694
             L+
Sbjct: 599 TSLI 602



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 176/396 (44%), Gaps = 10/396 (2%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
           TY  +I  L     +D    IL+ M + G+   +D+F+ I+ G   VG  ++++      
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 366 -EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEI 423
            E  C      +N LL+   +  KF +   +   M  D  I +  ++NI ++ LC+N+ +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A++L   M      PD  TY+  V   CK    +DA  +  +      V     Y+ L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPV-----YNAL 250

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G+C+  +I  A+++   M  NG   +  S++ +I  LCV   V+ A  L +  +  G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+T ++ G     +  + L +   M+ +GC  +V AY  LI  +     L++   
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             + M ++G +P+  T   L+ G A    L   S   N+++S     +   Y  +++ L 
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           K  +  QA+ L++ M  +G  P+  T    +    G
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCG 466


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 238/524 (45%), Gaps = 15/524 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           MN G       + NVV+G +    R     + VY++M  A   P+  T   L+  L +  
Sbjct: 1   MNPGTL-----LHNVVIGGLCRAGR-LRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAR 53

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+  A+   + M      P++ T  +V++ L    RVDD+  ++ EM   G+      Y+
Sbjct: 54  RLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYS 113

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC+  +L+EA+ L + M      P  +TY  +I   C   R+D+A+  +E M+  
Sbjct: 114 ALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE 173

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P    +  ++ G C+       +  L +      +P    ++ +++  C AG+   A
Sbjct: 174 GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 233

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             I E+M+    A   ++N  I   C   ++ +A  LLG+MV     PD  TY+  +   
Sbjct: 234 VDIFEEMSCAPTA--ITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK+   +DA  +F+Q+ A  L  D ++++ LV+GLC   ++ +A+E+   +++ GC  + 
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++N ++ G C   +V KA  L +   S G    T TY  ++ G  +  R    L  L Q
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411

Query: 573 MLVEG--CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           +  EG  C   V  Y I++ ++    +  D   F+  M++ G VP   T  +++  L   
Sbjct: 412 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKA 471

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            Q       + +++           + +++   + G+  +A  L
Sbjct: 472 HQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 225/497 (45%), Gaps = 23/497 (4%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P +    +VI GL    R+  ++ +  +M D      L+ YT ++  L +  +L +A+++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLT-YTKLVHGLSKARRLRDAVQV 61

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            + M +   +PD  T   ++  LC   R+DDA +++E+M+  G+      +  +V GLC+
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 355 VGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDS 409
             + DE+V  +E      C      +N+++   C A +   A   +E+M A+    D  +
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +   I   C++ ++ +  ELLG +      PD  TYS  + G CK     DA+ +F ++S
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                  +I+Y+ L+ G C+   + EA+ +   M  + C+    ++  L+   C M ++D
Sbjct: 242 CAPT---AITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  L     ++  S    T+T ++ GL    R +D L +L ++   GC   +  Y  ++
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
               + N+++            G VP+  T   L+ G     +       +++L S+   
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 418

Query: 650 LDSS--MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRF 707
             +S  MY I+++ L ++G T  A    + M+ +G+VP A T   +V            F
Sbjct: 419 CPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV------------F 466

Query: 708 AFDSSSFPDSVSDILAE 724
           A   +  P    ++L E
Sbjct: 467 ALCKAHQPQQAHELLEE 483



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 115/524 (21%), Positives = 225/524 (42%), Gaps = 54/524 (10%)

Query: 56  SLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVE 113
           +L HN+    L R       L  AL +++    Q    H  D  TY K++  L  A  + 
Sbjct: 5   TLLHNVVIGGLCRA----GRLRHALGVYR----QMNDAHPPDFLTYTKLVHGLSKARRLR 56

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
           +   + Q MV  R+      L  +V S     RV+ A  ++  M   G   +   ++ ++
Sbjct: 57  DAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALV 116

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
             + + +R   + V + + M + G  P V T N ++       R++ A     +M  +GC
Sbjct: 117 DGLCKCER-LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P+  T+  +I G   +  V   + +LGE+   G   ++  Y+ +I  LC+  +L +A+ 
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 294 LFKMM-----------------RALDL---------------MPDELTYEELINCLCENL 321
           +F+ M                 RA D+                PD +TY  L++  C+  
Sbjct: 236 IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHN 377
           RLDDA ++ + M+   L+P    F  +V GLC  G+ ++++  LE+     C      +N
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 378 ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            +++  C A +   A+ ++     R  + +  ++NI +   C      +A + L ++  +
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL--N 413

Query: 437 SVVPDCAT----YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           S    C T    Y+  +   C+    +DA++ + ++  +  V  + +++ +V  LC+  +
Sbjct: 414 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 473

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +A E+   M K G +    + + ++   C    + KA  L S
Sbjct: 474 PQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELAS 517



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 25/276 (9%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           D  IR+L    D   A  +  + ++   F       CKM       G +++   L Q MV
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAF-------CKM-------GRLDDAYELFQQMV 308

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
             +         SLV       R+  A+ +L  +   G   ++  +N V+    +     
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK----- 363

Query: 184 ADFVFVYKEMV----KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG-CCPNS- 237
           A+ V   +E+V      G VPN  T N L+       R + AL    +++ +G  CP S 
Sbjct: 364 ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 423

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             + I++  L  + R DD+V    EM   G     + +  ++  LC+ ++ ++A  L + 
Sbjct: 424 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 483

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           M      P   T + +++  C    +  A+++  ++
Sbjct: 484 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 171/714 (23%), Positives = 310/714 (43%), Gaps = 39/714 (5%)

Query: 28  SCANTIP-LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWV 86
           S  N  P L S+   I S    ++ +++  L   L P H++ +L    +  S L+ F W+
Sbjct: 42  STTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWI 101

Query: 87  SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHY 145
           S +K F+H    +  M+ +L                V++R +       I ++ S  N  
Sbjct: 102 SRRKFFKHDMSCFVSMLNRL----------------VRDRLFAPADHVRILMIKSCRNEG 145

Query: 146 RVNGAMRVLVNMNSG-GFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVD 203
            V    + L  +NS   F  ++  F  +L  I   K    D    +Y +M+ +GI P++ 
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLL--IQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N ++ +L +  R++ A      + +    PN+ T+  +I G   N  +D + ++   M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G       Y+ +I  LC E +LEEA+ + + M    + P   TY   +  LC+    
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNAL 379
            +A ++L  M   G  P    F  ++ GL   GKF+ ++      L D     T  +NAL
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 380 LECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +   C  G+F  A  I + M +   +    ++N  I+  C   +I+KA  +  +M+ +  
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P+  TY+  + G CK  N  +A+R+   +    L  D+ +Y++L+ G  +  K+  A  
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +F  M ++G S +  ++  +I G   + KVD A+ L      SG   ++ TY  ++ G  
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K     +      +M+ +G   +V  Y   I  +    +       F+ M K    P+  
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 619 TMLSLLHGL-----ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
           T  SL++GL     A+ ++++ + + +     +  V     Y  L+ GL  EG   +A  
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV---DTYTTLVKGLCGEGRCYEADQ 680

Query: 674 LLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRR---FAFDSSSFPDSVSDILA 723
           L+  M  KG  P    +  LL+G     +++S     ++ D+  F   +SD  A
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKA 734



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 249/598 (41%), Gaps = 47/598 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T+  MI  L   G V+E + +  ++ + + YPN      SL+     ++ ++ A  +   
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAF-TYTSLILGHCRNHNLDLAFAMFDR 262

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   ++ ++  +  E R   + + + +EMV+ GI P V T    L  L +  
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGR-LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               A++   +M K+GC PN +TF  +I GL  + + + ++ +  +M   G+      Y 
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC E + E A  +FK M +   +P   TY E+I C C    +  A  I + M+  
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G +P    +  ++ G C+ G  + ++  LE   G    P                     
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP--------------------- 480

Query: 397 EKMADRKIADCDSWNIP--IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                      D+W     I       ++  A  L   M+   + P+  TY+A + G   
Sbjct: 481 -----------DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC-MSKNGCSLSSS 513
           L   +DAL +F ++     +  S +Y+ ++ G  +   I+EA E FC  M K G   +  
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA-ENFCGKMVKQGLLPNVI 588

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD--LLVVLA 571
           ++   I GLC   +   A ++              TY+ ++ GL +  RA+D  +  +LA
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           ++   GC  +V+ Y  L++ +  + +  +       M K GL P  E   +LL G     
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708

Query: 632 QLHLVSSGINKLVSDSEV---LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           +   V S +N   S   +   L  S Y  LI  L KE    +A  +   ML K W  D
Sbjct: 709 K---VESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 122/535 (22%), Positives = 231/535 (43%), Gaps = 39/535 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L   G +EE   + + MV++   P V    I LV S  +    + A+ +L  
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV-SLCDAGCSSEAVELLGK 332

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   ++  F  ++  +  + + F   + +Y +M+  G+VP   T N L+  L    
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGK-FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEG 391

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R E+A   F+ M   G  P+++T+  +IK       +  ++ I  +M   G    +  Y 
Sbjct: 392 RFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYN 451

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C++  L  A+RL ++M+   L PD  TY ELI+      +L+ A  +   M+  
Sbjct: 452 TLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G++P    +  I+ G   + K D+++                                + 
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDAL-------------------------------ALF 540

Query: 397 EKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            KM +   +    ++N+ I    +   I +A    G+MV   ++P+  TY++F+ G C+ 
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK---NGCSLSS 512
                A ++F ++  ++   +  +YS L+ GLCQ E   E  E++  +++    GC  + 
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ-EGRAEDAEMYNLLARLTHYGCEPNV 659

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++  L+ GLC   +  +A +L       G   +   Y  +++G  K  + +  L +   
Sbjct: 660 DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYS 719

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           M   G  L +  Y  LI ++ ++N +++    F  M++     D      LL GL
Sbjct: 720 MDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 9/268 (3%)

Query: 57  LRHNLSPDHLIR--VLDNTNDLSS---ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           + H +SP+H+    ++D   +L+    AL +F W  ++     ++ TY  MI       +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALF-WKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 112 VEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           + E E  C  MVK+   PNV     S +     + R   A ++   M    +  ++  ++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVI-TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYS 626

Query: 171 VVLGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            ++  + +E R   A+   +   +   G  PNVDT   L++ L    R   A      M 
Sbjct: 627 SLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQ 686

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           KKG  P+   +  ++ G   N +V+ +++I   M  LG QL LS Y  +I  LC+EN +E
Sbjct: 687 KKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIE 746

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCL 317
           EA  +F+ M       DE+ +  L++ L
Sbjct: 747 EAQCIFQTMLEKHWNSDEVVWTVLLDGL 774


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 251/559 (44%), Gaps = 14/559 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           L+ S+V   ++N        +   GF +S++  N +LG +V  K G+ D  + VY E+ +
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLV--KMGWVDLAWEVYNEIAR 178

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +GI  NV TLN ++  L + ++I+        M +KG   +  T+  +I        + +
Sbjct: 179 SGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGE 238

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++  M   G++  L  Y  +I  LC++ +   A  +F  M ++ L PD  TY  L+ 
Sbjct: 239 AFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLV 298

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C N    +A DI  DM+  G++P    F  ++      G  D+++ +  D       P
Sbjct: 299 ESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVP 358

Query: 376 HNA----LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
            N     L+   C  G    A  I +KM ++  A D  ++N  +  LC+ + +  A  L 
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV   VVPD  T++  + G CK  N   AL +F  ++ +++  D ++Y+ L++G C+ 
Sbjct: 419 DEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKT 478

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +A E++  M       +  S+ IL+ G C +  V +A RL       G   T  T 
Sbjct: 479 TEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTC 538

Query: 551 TKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             ++ G  +   L +A + L    +M+ EG   D   Y  LI    +   +       N 
Sbjct: 539 NTVIKGYCRSGDLSKADEFL---GKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINK 595

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M   GL PD  T   +L+G     ++      + K++      D S Y  LING   +  
Sbjct: 596 METKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDN 655

Query: 668 TSQASYLLDLMLGKGWVPD 686
             +A    D ML +G+VPD
Sbjct: 656 LKEAFRFHDEMLQRGFVPD 674



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 126/585 (21%), Positives = 234/585 (40%), Gaps = 80/585 (13%)

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY--LL 209
           ++L+N+     K   D   ++L  I   +R     V + + ++       VD L +  L+
Sbjct: 66  KILLNLRRVRSKRLSDAQTLILRMI---RRSGVSRVEIVESLISMSSTCGVDNLVFDLLI 122

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
               +  ++    D F+ + +KG   +      ++ GL+    VD +  +  E+   GI 
Sbjct: 123 RSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGI- 181

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            EL+ YT  I                                 ++N LC++ ++DD    
Sbjct: 182 -ELNVYTLNI---------------------------------MVNALCKDHKIDDVKPF 207

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           L DM   G+      +  ++   C  G   E+   +    G    P    +NA++   C 
Sbjct: 208 LIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCK 267

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G++  AK +  +M    ++ D  ++N  +   C N    +A ++   M+   V PD  +
Sbjct: 268 KGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLIS 327

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           +S+ +    +  + + AL  FR +    LV D++ Y+ L+ G C+   ++EA+E+   M 
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           + GC+L   ++N ++ GLC  + +  A  L       G      T+T ++ G  K     
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQS------MSEQNKLKD------------------ 600
             L +   M  +    D+  Y ILI        M + N+L +                  
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507

Query: 601 ---CALFF--------NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
              C L F        + M++ G+ P   T  +++ G      L      + K++S+   
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG 567

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            DS  YN LING  K     +A +L++ M  KG  PD  T+ +++
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVIL 612



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 12/313 (3%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A+E+   +  S +  +  T +  V   CK    +D       +  + +  D ++Y+ L+ 
Sbjct: 169 AWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLIN 228

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+   + EA EV   MS  G   +  ++N +I GLC   +  +A  + +   S G S 
Sbjct: 229 AYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSP 288

Query: 546 TTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            T+TY  +++   +      AKD   + + ML  G + D+ ++  LI   S    L    
Sbjct: 289 DTTTYNTLLVESCRNNNFLEAKD---IFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
           ++F  M  +GLVPD      L++G      +       +K++     LD   YN ++NGL
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSSSFPDS 717
            K+ L + A+ L D M+ +G VPD  T     HG     ++G+ +         +  PD 
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDI 465

Query: 718 VS-DILAEGLGNT 729
           V+ +IL +G   T
Sbjct: 466 VTYNILIDGFCKT 478



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 1/163 (0%)

Query: 182 GFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           GF    F ++ EM++ GI P + T N +++    +  +  A +   +M  +G  P+S T+
Sbjct: 514 GFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITY 573

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I G +    +D +  ++ +M   G+Q ++  Y  I+   CR+ +++EA  + + M  
Sbjct: 574 NTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIE 633

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
             + PD  TY  LIN       L +A    ++M+  G  P DD
Sbjct: 634 RGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDD 676



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 5/249 (2%)

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           +D++ +  L+    Q  K+ E  + F  + + G  +S ++ N L+ GL  M  VD A  +
Sbjct: 113 VDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEV 172

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            +    SG      T   ++  L K  +  D+   L  M  +G   D+  Y  LI +   
Sbjct: 173 YNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCR 232

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           +  L +     N M   GL P   T  ++++GL    +        N+++S     D++ 
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG-SSVGEEIDSRRFAF---- 709
           YN L+    +     +A  +   ML +G  PD  +   L+G SS    +D     F    
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 710 DSSSFPDSV 718
            S   PD+V
Sbjct: 353 TSGLVPDNV 361


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 219/463 (47%), Gaps = 43/463 (9%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT +I  LC+  +LE+A+     M +    PD  TY  +I+ LC   RL +A   LE+M 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
              LTP    +  ++ GLC+ G+ DE+V                                
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAV-------------------------------A 102

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +L KM  + +    ++N  I  LC+ E   +AY+LL  MV S  +PD  TY+  + G CK
Sbjct: 103 LLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-CSLSSS 513
               +DALRVF Q+ A+    D ++YS L++GLC+  ++ EA+++F  M K+G C  ++ 
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI G C M K+D+A+ L      +G+S    TYT +M G  KL R  D   +L QM
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G   DV  +  L+  +  +N+L D       M +    P   T  ++L G    +QL
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342

Query: 634 HLVSS-GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                  + ++     V+    +NI+I GL K   +S+A  L++    +   PD   +  
Sbjct: 343 EEARKFMLEEMDCPPNVVS---FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 693 LV-GSSVGEEIDS-----RRFAFDSSSFPDSVS-DILAEGLGN 728
           ++ G    +++D      R+   +    P+S++   L  GL N
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN 442



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 235/487 (48%), Gaps = 14/487 (2%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T   L++ L +  R+E AL    +M  KG  P+  T+  VI  L   +R+ ++   L EM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            +  +   +  YT +I  LC+  +++EA+ L   MR    +P  +TY  LI+ LC+  R 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
            +A D+LE+M+  G  P    +  ++ G C+  K D+++   E        P    ++ L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 380 LECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           ++  C  G+   A  +  +M  +   + +  ++N  I   C   ++ +A  LL RM  + 
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             PD  TY+  + G CKL   +DA  +  Q++ + L  D ++++ L++GLC+  ++++AV
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +   M +  CS +  ++N ++ G C   ++++A +   +           ++  ++ GL
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGL 369

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPD 616
            K+ R+ + + ++ +     C  DV  Y  +I  +  + K+ + C ++  ++ + G +P+
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +L+ GL +   L      I K      V +   YN+LI+   K      A  LLD
Sbjct: 430 SITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLD 485

Query: 677 LMLGKGW 683
            M+ +G+
Sbjct: 486 DMVQRGF 492



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 229/488 (46%), Gaps = 21/488 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+       R+  A+  L  M S GF   V  +  V+ A+  E R      F+ +EM  
Sbjct: 16  SLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL-EEMAN 74

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + PNV T   L++ L +  R++ A+    +M KK C P + T+  +I GL    R  +
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASE 133

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L EM   G   ++  YT +I   C+  K ++A+R+F+ + A    PD +TY  LI+
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 316 CLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
            LC+  RL +A D+   MI  G   P    +  ++ G C +GK DE++N LE      +S
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           P    +  L+   C   +   A  +L +M  + +  D  ++   +  LC    +  A  +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           LG M   S  P   TY+  + G C+    E+A +    +       + +S++ ++ GLC+
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCK 371

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTS 548
           V + +EA+E+     +  C+     +  +I GLC  +KVD+A R+ R +    G    + 
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 549 TYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           TY+ ++ GL     L RA+         + +GC  ++  Y +LI +  + N+ +D     
Sbjct: 432 TYSTLITGLCNAGMLDRARGY-------IEKGCVPNIGTYNLLIDAFRKANRDEDARELL 484

Query: 606 NVMVKAGL 613
           + MV+ G 
Sbjct: 485 DDMVQRGF 492



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 203/456 (44%), Gaps = 41/456 (8%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L   N L  A K  + ++  +       TY  +I  L   G V+E   L   M K+
Sbjct: 52  VIHALCVENRLHEARKFLEEMA-NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK 110

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
             P       SL+       R + A  +L  M   G    +  +  ++    + K+   D
Sbjct: 111 CVPTA-VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS-DD 168

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVI 244
            + V++++V  G  P+V T + L++ L +  R++ A+D F RM K G C PN+ T+  +I
Sbjct: 169 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 228

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G     ++D+++++L  M + G   ++  YT ++   C+  +L++A  L   M    L 
Sbjct: 229 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 288

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +T+  L++ LC   RL DA  IL +M     +PT   +  I+ G C   + +E+  F
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           + ++   +  P N +                             S+NI IR LC+     
Sbjct: 349 MLEE---MDCPPNVV-----------------------------SFNIMIRGLCKVNRSS 376

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL-DSISYSKL 483
           +A EL+         PD   Y+  + G C+    ++A RV+R++  +   L +SI+YS L
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           + GLC    +  A        + GC  +  ++N+LI
Sbjct: 437 ITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLI 468



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 2/263 (0%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +  +S   D  TY++ + G CK+   E AL    ++ ++    D  +Y+ ++  LC   +
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA +    M+    + +  ++ +LI GLC   +VD+A+ L S         T  TY  
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNS 120

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL K +RA +   +L +M+  GC  D+  Y  LI    +  K  D    F  +V  G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGLWKEGLTSQA 671
             PD  T   L+ GL    +L        +++     + +++ YN LI+G  + G   +A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             LL+ M   G  PD  T+  L+
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLM 263


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/642 (23%), Positives = 293/642 (45%), Gaps = 10/642 (1%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P H+  V+    D   AL++F  +  +  F+HT  TY  +I KLG  G  E ME +  
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 121 NMVKERYPNVREAL-ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           +M +    ++ E + +  + ++    +V  A+ V   M+    + +V  +N ++  +V+ 
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 124

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
             G+ D    VY  M   GI P+V +    ++   +T+R  +AL     M  +GC  N  
Sbjct: 125 --GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 182

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
            +  V+ G    +   +   + G+M   G+ L LS +  ++ +LC++  ++E  +L   +
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               ++P+  TY   I  LC+   LD A  ++  +I  G  P    + +++ GLC+  KF
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL-EKMADRKIADCDSWNIP 413
            E+  +L         P    +N L+   C  G   LA+ I+ + + +  + D  ++   
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC   E  +A  L    +   + P+   Y+  + G        +A ++  ++S + L
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           + +  +++ LV GLC++  +++A  +   M   G      +FNILI+G     K++ A+ 
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +  +   +G      TY  ++ GL K  + +D++     M+ +GCA ++  + IL++S+ 
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
              KL +       M    + PD  T  +L+ G      L    +   K+    +V  S+
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602

Query: 654 -MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             YNI+I+   ++   + A  L   M+ +   PD  T+ L+V
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/554 (24%), Positives = 254/554 (45%), Gaps = 7/554 (1%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
           SF    R + A+R+L NM+S G +++V  +  V+G   EE    A+   ++ +M+ +G+ 
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK-AEGYELFGKMLASGVS 213

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
             + T N LL VL +   ++       ++ K+G  PN  T+ + I+GL     +D +V +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           +G + + G + ++  Y  +I  LC+ +K +EA      M    L PD  TY  LI   C+
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
              +  A  I+ D +  G  P    +  ++ GLC  G+ + ++    +  G    P    
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N L++   N G    A  +  +M+++  I +  ++NI +  LC+   +  A  L+  M+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                PD  T++  + G       E+AL +   +    +  D  +Y+ L+ GLC+  K  
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           + +E +  M + GC+ +  +FNIL+  LC  RK+D+A+ L     +   +    T+  ++
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573

Query: 555 LGLVKLQRAKDLLVVLAQML-VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
            G  K         +  +M      +     Y I+I + +E+  +      F  MV   L
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD  T   ++ G      ++L    + +++ +  +   +    +IN L  E    +A+ 
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693

Query: 674 LLDLMLGKGWVPDA 687
           ++  M+ KG VP+A
Sbjct: 694 IIHRMVQKGLVPEA 707



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/313 (21%), Positives = 137/313 (43%), Gaps = 6/313 (1%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++++A  +  RM      P   +Y+A +        ++ A +V+ ++  + +  D  S++
Sbjct: 91  KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             ++  C+  +   A+ +   MS  GC ++  ++  ++ G        +   L     +S
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S   ST+ K++  L K    K+   +L +++  G   ++  Y + IQ + ++ +L   
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                 +++ G  PD  T  +L++GL   S+       + K+V++    DS  YN LI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS-- 719
             K G+   A  ++   +  G+VPD  T+  L+     E   +R  A  + +    +   
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390

Query: 720 ----DILAEGLGN 728
               + L +GL N
Sbjct: 391 VILYNTLIKGLSN 403


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 155/642 (24%), Positives = 290/642 (45%), Gaps = 10/642 (1%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P H+  V+    D   AL++F  +  +  F+HT  TY  +I KLGL G  E ME +  
Sbjct: 5   LLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLV 64

Query: 121 NMVKERYPNVREAL-ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           +M +    ++ E + +  + ++    +V  A+ V   M+    + +V  +N ++  +V+ 
Sbjct: 65  DMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDS 124

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
             G+ D    VY  M   GI P+V +    ++    T+R  +AL     M  +GC  N  
Sbjct: 125 --GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVV 182

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
            +  V+ G    +  D+   + G+M   G+ L LS +  ++ +LC++  ++E  +L   +
Sbjct: 183 AYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKV 242

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               ++P+  TY   I  LC+   LD A  ++  +I  G  P    +  ++ GLC+  KF
Sbjct: 243 IKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKF 302

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL-EKMADRKIADCDSWNIP 413
            E+  +L         P    +N L+   C  G   LA+ IL   + +  + D  ++   
Sbjct: 303 QEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSL 362

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC   E  +A  L    +   + P+   Y+  + G        +A ++  ++S + L
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           + +  +++ LV GLC++  +++A  +   M   G      +FNILI+G     K++ A+ 
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +  +   +G      TY  ++ GL K  + +D++     M+ +GCA ++  + IL++S+ 
Sbjct: 483 ILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDS 652
             +KL         M    + PD  T  +L+ G      L    +   K+     V   +
Sbjct: 543 RYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             YNI+I+   ++   + A  L   M+ +   PD  T+ L+V
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 263/569 (46%), Gaps = 14/569 (2%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V    I +  SF    R + A+R+L NM+S G +++V  +  V+G   EE   F D  
Sbjct: 144 PDVYSFTIRMK-SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN--FKDEG 200

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M+ +G+   + T N LL VL +   ++       ++ K+G  PN  T+   I+G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQG 260

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L     +D +V ++G + D G + ++  Y  +I  LC+ +K +EA      +    L PD
Sbjct: 261 LCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPD 320

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY  LI   C+   +  A  IL + +  G  P +  +  ++ GLC  G+ + ++    
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
           +  G    P    +N L++   N G    A  +  +M+++  I +  ++NI +  LC+  
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMG 440

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A  L+  M+     PD  T++  + G       E+AL +   +    +  D  +Y+
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYN 500

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GLC+  K  + +E +  M + GC+ +  +FNIL+  LC   K+DKA+ L     + 
Sbjct: 501 SLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK 560

Query: 542 GTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +    T+  ++ G  K   L  A  L   + ++ +  C+     Y I+I + +E+  +
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCS--TPTYNIIIHAFTEKLNV 618

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                 F  MV   L PD  T   ++ G      + L    + +++ +  +   +    +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRV 678

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           IN L  E    +A+ ++  M+ KG VP+A
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/481 (21%), Positives = 199/481 (41%), Gaps = 32/481 (6%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A++ F RM    C P   ++  ++  L+ +   D +  +   M D GI  ++  +T
Sbjct: 91  KVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             +   CR ++   A+RL   M +     + + Y  ++    E    D+  ++   M+  
Sbjct: 151 IRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLAS 210

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G++            LC                    S  N LL   C  G     + +L
Sbjct: 211 GVS------------LC-------------------LSTFNKLLHVLCKKGDVKECEKLL 239

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +K+  R +  +  ++N  I+ LC+  E+  A  ++GR++     PD  TY+  + G CK 
Sbjct: 240 DKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKN 299

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             +++A     ++  + L  DS +Y+ L+ G C+   +  A  +      NG      ++
Sbjct: 300 SKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTY 359

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI GLC   + ++A+ L + A   G       Y  ++ GL       +   + ++M  
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSE 419

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +G   +V+ + IL+  + +   + D      VM+  G  PD  T   L+HG +   ++  
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
               ++ ++ +    D   YN L+NGL K             M+ KG  P+  T  +L+ 
Sbjct: 480 ALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLE 539

Query: 696 S 696
           S
Sbjct: 540 S 540



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 170/419 (40%), Gaps = 13/419 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L      +E E     +V E          +L+  +     V  A R+LVN 
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNA 347

Query: 158 NSGGFKLSVDVFNVVLGAIVEE---KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
              GF      +  ++  +  E    R  A    ++ E +  GI PNV   N L++ L  
Sbjct: 348 VFNGFVPDEFTYRSLIDGLCHEGETNRALA----LFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              I  A      M +KG  P  +TF I++ GL     V D+  ++  M   G   ++  
Sbjct: 404 QGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  +I     + K+E A+ +  +M    + PD  TY  L+N LC+  + +D  +  + M+
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G  P    F  ++  LC   K D+++  LE+      +P       L++  C  G   
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 391 LAKCILEKMADRKIADCDS--WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
            A  +  KM +  +  C +  +NI I    E   +  A +L   MV   + PD  TY   
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           V G CK  N +   +   ++     +    +  +++  LC  +++ EA  +   M + G
Sbjct: 644 VDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 135/313 (43%), Gaps = 6/313 (1%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++++A  +  RM      P   +Y+A +        ++ A +V+ ++  + +  D  S++
Sbjct: 91  KVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             ++  C+  +   A+ +   MS  GC ++  ++  ++ G       D+   L     +S
Sbjct: 151 IRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLAS 210

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S   ST+ K++  L K    K+   +L +++  G   ++  Y   IQ + ++ +L   
Sbjct: 211 GVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAA 270

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                 ++  G  PD  T   L++GL   S+       + KLV++    DS  YN LI G
Sbjct: 271 VRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS-- 719
             K G+   A  +L   +  G+VPD  T+  L+     E   +R  A  + +    +   
Sbjct: 331 YCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390

Query: 720 ----DILAEGLGN 728
               + L +GL N
Sbjct: 391 VILYNTLIKGLSN 403


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 237/505 (46%), Gaps = 21/505 (4%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C P+   F +VI GL    R+D++ S+L      G + +   Y   I  LC+  ++++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           +L K M     +P  +TY  L++ L +  RLD+A  +LE M+  G +PT   +  ++ GL
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 353 CEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK----- 403
            + G+ +E+     D  G    P    + AL++  C +GK   A  + ++   RK     
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLG-RMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           + D  ++   I  LC+   I +A ++     V    +PD  TY++ + G CKL   E+  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             F ++  +    D+++Y+ L++G  + + I +A  V+  M ++G  +S+ ++NI++ GL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   +V +A          G   T  TY+ +M G          + +  +ML  GC  ++
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI-- 640
            +Y I+I+ +    KL     +F  +++  L PD  T  + LHGL    +L  VS G+  
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC--QRLDTVSDGVEL 420

Query: 641 -NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL-----V 694
              +VS     +   Y+IL++G+ + G    A  +   M+ +G  PD      L     +
Sbjct: 421 FESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCI 480

Query: 695 GSSVGEEIDSRRFAFDSSSFPDSVS 719
              V E ++  R   +  S PD+ S
Sbjct: 481 AGRVDEALEVFR-ELERRSAPDAWS 504



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 162/399 (40%), Gaps = 41/399 (10%)

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
           +P    F  ++ GLC   + DE+ + LE        P                       
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEP----------------------- 40

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
                  D  ++N+ I  LC+ E +  A++LL +M     +P   TY+A V G  K    
Sbjct: 41  -------DYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 93

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ++A+ V  Q+  +       +Y+ +++GL +  ++ EA  +F  M  NGC   +  +  L
Sbjct: 94  DEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 153

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTS----TYTKIMLGLVKLQRAKDLLVVLAQML 574
           I GLC   K ++A  L   A +     T      TYT ++ GL K  R  +   V     
Sbjct: 154 IKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEA 213

Query: 575 VE-GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           VE G   D   Y  +I  + +  ++++    F+ M   G  PD  T  +L+ G      +
Sbjct: 214 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 273

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH--- 690
                   +++    V+ +  YNI+++GL K G  ++A      M  +G V    T+   
Sbjct: 274 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 333

Query: 691 --GLLVGSSVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
             G     +V   ++  R   D    P+ VS +I+  GL
Sbjct: 334 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 372



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 7/323 (2%)

Query: 51  EAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK 105
           EA  +       PD      LI  L     +  A ++F   ++++ F   A TY  +I  
Sbjct: 172 EANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDG 231

Query: 106 LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
           L   G VEE       M    Y        +L+  F+    +  A RV   M   G  +S
Sbjct: 232 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 291

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              +N++L  + +  R  A+    +  M + G V  V T + L++       + +A++ F
Sbjct: 292 TVTYNIILDGLCKAGR-VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF 350

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC-R 284
           RRM  +GC PN  ++ I+I+GL    ++  +     ++    +  ++  +   +  LC R
Sbjct: 351 RRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQR 410

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            + + + + LF+ M +    P+  +Y  L++ +C    L+ A +I  +M+  G+ P   V
Sbjct: 411 LDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVV 470

Query: 345 FVDIVRGLCEVGKFDESVNFLED 367
           F  ++R LC  G+ DE++    +
Sbjct: 471 FNTLIRWLCIAGRVDEALEVFRE 493



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           V  FN  L  + +     +D V +++ MV  G  PN+ + + L++ +     +E AL+ F
Sbjct: 397 VYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIF 456

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           R M  +G  P+   F  +I+ L    RVD+++ +  E+         S+++ ++  L R 
Sbjct: 457 REMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWS-LLDGLSRC 515

Query: 286 NKLEEA 291
            ++EEA
Sbjct: 516 ERMEEA 521


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 144/628 (22%), Positives = 289/628 (46%), Gaps = 12/628 (1%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L    +++ L    +LSS L  F  ++    FQHTA TY  MI +LG    ++ ++ + Q
Sbjct: 39  LQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQ 98

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M  +      +  I ++  +        A+++   +   G K +V ++N +L A++ E 
Sbjct: 99  QMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSEN 158

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           + F     +Y  M K G++PNV T N LL+ L + +R+++A   F  M  KGC P++ T+
Sbjct: 159 K-FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTY 217

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L    ++DD+  + G       +  +  Y  +I  +C+E ++E AI+L   M  
Sbjct: 218 TTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD 272

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + P+ ++Y  +IN LC +  ++ A  +   M + G       F  +++G    GK  E
Sbjct: 273 NGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE 332

Query: 361 SVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIR 415
           +++     ++D C      +N L+   C+ G    A  + ++M     + +  +++I I 
Sbjct: 333 ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
              ++ ++  A E   RM+     P+  TY+  V   CK   ++ A  +  +++ +    
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           ++++++  ++GLC   ++  A+++   M  +GC  + +++N L+  L  M K ++A  L 
Sbjct: 453 NTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               +        TY  ++ G  +     + L +  + LV G A D   Y  +I +  +Q
Sbjct: 513 QEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572

Query: 596 NKLKDCA-LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            K+K  A L   V       PD  T  SL+ G  +   +    + ++K ++     + + 
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKG 682
           +N L+   +         ++LD +L KG
Sbjct: 633 WNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/544 (21%), Positives = 237/544 (43%), Gaps = 14/544 (2%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           NS  F+ +   + V++  +  E     D V ++ ++M   GI    D    ++       
Sbjct: 66  NSNAFQHTASTYRVMIERLGRECE--MDMVQYILQQMKMDGINCCEDLFICIINGYKRVG 123

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E AL  F R+ + GC P  R +  ++  L++ ++      +   M   G+   +  Y 
Sbjct: 124 SAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN 183

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC+ ++++ A +LF  M      PD +TY  +++ LC+  ++DDA ++       
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR---- 239

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
              P+  V+  ++ G+C+ G+ + ++  L +       P    ++ ++   C +G   LA
Sbjct: 240 -FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +  +M  R   A+  ++   I+      ++ +A +L   M+     P+   Y+  + G
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C   + E+AL+V  Q+     + +  +YS L++G  +   +  A E +  M  +GC  +
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++  ++  LC     D+A  L       G +  T T+   + GL    R +  + +L 
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   GC  ++  Y  L+ ++   NK ++    F  +    L P+  T  ++L+G +   
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG-KGWVPDATTH 690
            +        K +      DS  YN +I+   K+G    A+ L++ +   K W PD  T+
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598

Query: 691 GLLV 694
             L+
Sbjct: 599 TSLI 602



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 176/396 (44%), Gaps = 10/396 (2%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
           TY  +I  L     +D    IL+ M + G+   +D+F+ I+ G   VG  ++++      
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 366 -EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEI 423
            E  C      +N LL+   +  KF +   +   M  D  I +  ++NI ++ LC+N+ +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A++L   M      PD  TY+  V   CK    +DA  +  +      V     Y+ L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPV-----YNAL 250

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G+C+  +I  A+++   M  NG   +  S++ +I  LCV   V+ A  L +  +  G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+T ++ G     +  + L +   M+ +GC  +V AY  LI  +     L++   
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             + M ++G +P+  T   L+ G A    L   S   N+++S     +   Y  +++ L 
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           K  +  QA+ L++ M  +G  P+  T    +    G
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG 466


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 230/507 (45%), Gaps = 32/507 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + + +K GIVPNV+T N ++      N+ + A++    M K  C P++ T+  ++  L 
Sbjct: 195 AFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALC 254

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R+ D+  +L +M   G+    + Y  ++   C+   L+EA  + ++M   +L+PD  
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LIN LC   R+++A  + ++M  + L P      D+V                   
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLP------DVVS------------------ 350

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
                  +N L+  C    K   A  +LE+M+++ +  +  + NI ++W C+  ++  A 
Sbjct: 351 -------YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
             + +M  S   PDC TY+  + G CK  N  +A R   ++  +++ +DS++ + ++  L
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+ +K+ EA ++     K G  +   S+  LI G      VD+A++L           +T
Sbjct: 464 CREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  I+ GL +  + +  +  L ++L  G   D   Y  ++     +  ++    F N 
Sbjct: 524 VTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV+    PD  T   LL GL     L       N  VS  + +D+  YN LI  L KEG 
Sbjct: 584 MVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR 643

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
              A  LL  M  K   PD  T+  ++
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAII 670



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 138/565 (24%), Positives = 263/565 (46%), Gaps = 28/565 (4%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           +Q    H A    K + +L L  N+     L  ++V  RYP+      S+ FS       
Sbjct: 146 VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV--RYPSSH----SVSFS---REAF 196

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           N A+++       G   +V+ FN+V+ G  +E K  F D V     M K    P+  T N
Sbjct: 197 NDAIKL-------GIVPNVNTFNIVIYGYCLENK--FKDAVEFLNVMGKYNCSPDNVTYN 247

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            +L+ L +  R+  A D    M  +G  PN  T+ I++ G      + ++ +++  M   
Sbjct: 248 TILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            +  ++  Y  +I  LC E ++EEA +L   M  L L+PD ++Y  LIN   E  ++ +A
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
             +LE+M   G+ P       +V+  C+ GK D++ N +   ++ G+  SP    +N L+
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF--SPDCVTYNTLI 425

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
              C AG    A   +++M  + +  D  + N  +R LC  +++ +AY+LL         
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            D  +Y   ++G  K  N + AL+++ ++  + ++  +++Y+ ++ GLCQ  K  +A+  
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              + ++G     +++N +++G C    V+KA +  +    +       T   ++ GL  
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
               +  L +    + +G A+D   Y  LI S+ ++ +L D     + M +  L PD  T
Sbjct: 606 EGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 620 MLSLLHGLADGSQLHLVSSGINKLV 644
             +++  L D  ++      ++K++
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKML 690



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 216/495 (43%), Gaps = 40/495 (8%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           YCKM   L  A NV E+  + QN +    P+V    + L+    N  R+  A ++   M 
Sbjct: 288 YCKMGW-LKEAANVIEL--MTQNNL---LPDVWTYNM-LINGLCNEGRIEEAFKLRDEME 340

Query: 159 SGGFKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           +   KL  DV  +N ++   +E  +    F  + +EM + G+ PN  T N +++   +  
Sbjct: 341 N--LKLLPDVVSYNTLINGCLEWSKISEAFKLL-EEMSEKGVKPNAVTHNIMVKWYCKEG 397

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A +   +M + G  P+  T+  +I G      + ++   + EM    ++++     
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            I+  LCRE KLEEA +L    R      DE++Y  LI    ++  +D A  + ++M   
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT--SPHNALLECCCNAGKFFLA 392
            + P+   +  I+ GLC+ GK +++++ L +  + G +   + +N +L   C  G    A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                KM +     D  + NI +R LC    + KA +L    V      D  TY+  +  
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC--- 508
            CK    +DA  +  ++  + L  D  +Y+ ++  L    +I EA E    M + G    
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPX 697

Query: 509 --------------------SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
                                 SS +++  I  LC   K   A+R+   +   G +   S
Sbjct: 698 QVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 549 TYTKIMLGLVKLQRA 563
           TY  +M GL+K +++
Sbjct: 758 TYINLMDGLIKRRKS 772


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 256/538 (47%), Gaps = 15/538 (2%)

Query: 166  VDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
             D FN +L ++   K G+   VF +Y+++   GI P++ TLN L+        +      
Sbjct: 946  TDTFNHLLASVA--KLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 225  FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            F    K+G  P++ T   ++KG+   + + D+V +  EM   G+  +   Y  +I  LC+
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063

Query: 285  ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              K   AI+L + M+  +   D  TY  +I+ LC++    +A D+  +MI  G+ P   V
Sbjct: 1064 ARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122

Query: 345  FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
            +  ++ GLC  G+  E++ F ++  G   S     +N+L+     AG +      L  M 
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182

Query: 401  DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            DR  + D  ++ I I  LC+  ++ +A ++L  M      PD  TY+  + G C +   E
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242

Query: 460  DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            DA ++F  ++ + + L+  SY+ L+ G C+ +KI EA   F  M   G   S+ ++N LI
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302

Query: 520  YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVE 576
              LC   +V  A +L     + G     STY  ++ GL K   L+ A DL   + +   +
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHK 1362

Query: 577  GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
                ++E + IL+  M    KL++    F+ + K GL PD      L++GL +   L   
Sbjct: 1363 P---NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 1419

Query: 637  SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               + ++     + DS  +N++I  L KE    +A  LL+ M  + + PD     +L+
Sbjct: 1420 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 215/469 (45%), Gaps = 9/469 (1%)

Query: 165  SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            +V V  +V G  +E   G  D V ++ EM K G++ +  T   L+  L +  +   A+  
Sbjct: 1016 AVTVTTLVKGVWMEN--GIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL 1073

Query: 225  FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              +M K  C  +  T+ ++I  L  +    +++ +  EM   GI  ++  Y+ ++  LCR
Sbjct: 1074 HEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 1132

Query: 285  ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              +L+EA+  FK M    +  D  TY  LI+ L       +    L  M+  G +P    
Sbjct: 1133 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 1192

Query: 345  FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
            F  ++ GLC+ GK  E+   LE        P    +N L+   C  G+   A  + E +A
Sbjct: 1193 FTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 1252

Query: 401  DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            DR I  +  S+NI I   C++++I +A+     M    + P   TY+  +   C+     
Sbjct: 1253 DRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 1312

Query: 460  DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
             A ++F ++      L   +Y  L++GLC+   + EA+++F  + K     +   F+IL+
Sbjct: 1313 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILL 1372

Query: 520  YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             G+C   K+++A +       +G    T  Y  ++ GL       + + +L QM  +GC 
Sbjct: 1373 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432

Query: 580  LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
             D   + ++IQ++ ++N++ +       M      PD E + S+L  LA
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD-EAVTSMLLCLA 1480



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 156/390 (40%), Gaps = 8/390 (2%)

Query: 336  IGLTPTDDVFVDIVRGLCEVG--KFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
            IG   +   F   VR  C  G  K ++++   +        P     N LL      G +
Sbjct: 903  IGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYY 962

Query: 390  FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
                 +  K+ D  I  D  + NI I   C    +   + + G  +     PD  T +  
Sbjct: 963  STVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTL 1022

Query: 449  VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
            V G        DA+++F +++ + L+ D+ +Y  L+ GLC+  K   A+++   M  N C
Sbjct: 1023 VKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-C 1081

Query: 509  SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                 ++ ++I  LC      +A+ + S    +G       Y+ +M GL +  R K+ L 
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141

Query: 569  VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
               +M   G + DV  Y  LI  +S     K+   F N+MV  G  PD  T   L+ GL 
Sbjct: 1142 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 1201

Query: 629  DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               ++      +  +    +  D   YN L+NGL   G    A+ L + +  +G   +  
Sbjct: 1202 KEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 1261

Query: 689  THGLLVGSSVGEEIDSRRFAFDSSSFPDSV 718
            ++ +L+     ++     F F     P  +
Sbjct: 1262 SYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 226/476 (47%), Gaps = 5/476 (1%)

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           + +D++ RM  +G  PN   +  VI  L  +  V D+ +I+ ++F+  +  +   YT +I
Sbjct: 368 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 427

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              CR++ L+ A+++F  M      P+ +TY  LIN LC++ R+++A D++ +MI+ G+ 
Sbjct: 428 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 487

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           PT       +  LC++G ++++     D       P    + AL+   C +G   +A  +
Sbjct: 488 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 547

Query: 396 LEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
             +M+ D    +  ++N  I  L EN  I+ A+ +L  M  + +  +  TY+  + G C 
Sbjct: 548 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCI 607

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + + A+ V   +  +    + ++Y+ +++G C     T A+ +   M   GC     S
Sbjct: 608 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 667

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI G C + K++ A  L +     G      TYT ++ G  K ++      +L  M 
Sbjct: 668 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 727

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             GC  +V+ Y +LI  +++QN          VM++ G+ P+  T  +++ GL       
Sbjct: 728 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 787

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           L     NK++    + +   Y+ LI  L +EG   +A  L   +   G +PD  T+
Sbjct: 788 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 245/520 (47%), Gaps = 14/520 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G + ++ ++N V+ A+ ++    AD   + K++ ++ + P  DT  Y   +L    
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGN-VADAETIMKKVFESEMSP--DTFTYTSMILGHCR 432

Query: 217 R--IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           +  ++SAL  F +M K+GC PN+ T+  +I GL  + RV+++  ++ EM   GI    + 
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP--TA 490

Query: 275 YTCIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           +TC  P+  LC     E+A RLF  M+     P+  TY  LI+ LC +  L  A  +   
Sbjct: 491 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 550

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVG--KFDESVNFLEDKCGYVTS--PHNALLECCCNAGK 388
           M   G+ P    +  ++  L E    K+   V  L  + G  T+   +N +++  C  G 
Sbjct: 551 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGD 610

Query: 389 FFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  ++  M  R   A+  ++N  I+  C++     A  +L  M      PD  +Y+ 
Sbjct: 611 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 670

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK+   E A  +F ++    L  + ++Y+ L++G C+ EK+  A  +   M ++G
Sbjct: 671 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 730

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  +  ++N+LI+GL        A  L  +    G      TYT ++ GL K       L
Sbjct: 731 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 790

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M+ +GC  ++  Y  LI+++ ++ K+++    F  + + GL+PD  T + ++   
Sbjct: 791 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 850

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
               ++    + + +++          Y +LI GL  E L
Sbjct: 851 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 890



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 129/618 (20%), Positives = 234/618 (37%), Gaps = 66/618 (10%)

Query: 74   NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
            +DL SAL++F  ++ +    +T  TY  +I  L  +G V E   L + M+          
Sbjct: 434  HDLDSALQVFNQMAKEGCEPNTV-TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492

Query: 134  LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
                + +  +      A R+ V+M + G + +V  +  ++  +          + ++  M
Sbjct: 493  CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL-LKVAIGLFHRM 551

Query: 194  VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
             + G+ PN  T N L+ +L E  RI+ A      M + G   N  T+  +IKG       
Sbjct: 552  SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 254  DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
              ++ ++  M   G    L  Y  II   C       A+R+  +MR     PDE +Y EL
Sbjct: 612  KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 314  INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKC 369
            I   C+  +++ A  +  +M+  GL P +  +  ++ G C+  K D + + LE      C
Sbjct: 672  ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 370  GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
                  +N L+        F  A+ + + M +  I  +  ++   I  LC+N     A E
Sbjct: 732  RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 429  LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI---------- 478
            +  +M+    +P+  TYS+ +    +    E+A  +F ++    L+ D I          
Sbjct: 792  MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 479  -------------------------SYSKLVEGL--------------------CQVEKI 493
                                     +Y  L++GL                    C     
Sbjct: 852  MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 911

Query: 494  TEAVEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
            T   +    MS         LS    N L+  L    +  +A  L     S G       
Sbjct: 912  TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 971

Query: 550  YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
            Y  ++  L++++     + V   M  +GC + +  Y  LI ++ + ++ K+  + F  M+
Sbjct: 972  YNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENML 1031

Query: 610  KAGLVPDRETMLSLLHGL 627
                 PD      L+ GL
Sbjct: 1032 MRTWNPDDVVQAVLIDGL 1049



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/452 (20%), Positives = 192/452 (42%), Gaps = 30/452 (6%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +IK   +   +  ++S L  +   G+++ L  Y+ ++  L R       +  +  M +  
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + P+ L Y  +IN LC++  + DA  I++ +    ++P    +  ++ G C     D ++
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                       P+                                +++  I  LC++  
Sbjct: 441 QVFNQMAKEGCEPNTV------------------------------TYSTLINGLCDSGR 470

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A++L+  M++  ++P   T +  ++  C +  YEDA R+F  +  +    +  +Y+ 
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 530

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ GLC    +  A+ +F  MS++G   ++ ++N LI  L   R++  A  + +L   +G
Sbjct: 531 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY +++ G   L   K  ++V+  ML  G + ++  Y  +I+   +        
Sbjct: 591 LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 650

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
              ++M   G  PD  +   L+ G    S++       N++V D    +   Y  LI+G 
Sbjct: 651 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 710

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K+     A+ LL+ M   G  P+  T+ +L+
Sbjct: 711 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 742



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 62/330 (18%)

Query: 97   DTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLV 155
             TY  +I  L    N    E LC+ M++E  +PNV     +++     +   + A+ +  
Sbjct: 736  QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV-VTYTAMIDGLCKNGSTSLALEMFN 794

Query: 156  NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
             M   G   ++  ++ ++ A+ +E +   +   ++ E+ + G++P+  T   ++E    +
Sbjct: 795  KMIEQGCLPNLLTYSSLIRALGQEGK-VEEAENLFAELERHGLIPDEITYVKMIEAYIMS 853

Query: 216  NRIESALDQFRRMHKKGCCPNSRTFEIVIKGL-----IANSRV----------------- 253
             ++E A +   RM K GC P   T+ ++IKGL     +A+ R+                 
Sbjct: 854  GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTT 913

Query: 254  -DDSVSI------------------------------------LGEMFDLGIQLELSFYT 276
              D+VS+                                    LG M   G+  +   Y 
Sbjct: 914  DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 973

Query: 277  CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             ++  L R   ++ A+ +FK M           Y+ELI  LC+  R  +A    E+M++ 
Sbjct: 974  SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 1033

Query: 337  GLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
               P D V   ++ GL   G  D  + FL 
Sbjct: 1034 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 1063



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 27/278 (9%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL--ISLVFSFVNHYRVNGAMRVLV 155
            TY  +I  LG  G VEE E L   +  ER+  + + +  + ++ +++   +V  A   L 
Sbjct: 807  TYSSLIRALGQEGKVEEAENLFAEL--ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864

Query: 156  NMNSGGFKLSVDVFNVVLGAIVEEK-------RGFADFV----FVYKEMVK--------- 195
             M   G + ++  + V++  +  E            D V    F Y+   +         
Sbjct: 865  RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK 924

Query: 196  -AGIVP--NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
             A + P  +V   N L+  L    R   A +    M  +G CP+   +  ++  L+    
Sbjct: 925  LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 984

Query: 253  VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            VD ++ +   M   G ++ L+ Y  +I  LC+ ++ +EA   F+ M      PD++    
Sbjct: 985  VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAV 1044

Query: 313  LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
            LI+ L  +   D   + L  M      P+  ++  + R
Sbjct: 1045 LIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 1082


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 232/499 (46%), Gaps = 6/499 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A+ +L  M   G++ S+   + +L      KR  +D V +  +MV+ 
Sbjct: 51  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEM 109

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+  T   L+  LF  N+   A+    RM ++GC PN  T+ +V+ GL     +D +
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
            ++L +M    I+ ++  +  II  LC+   +++A+ LFK M    + P+ +TY  LI+C
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC   R  DA+ +L DMI   + P    F  ++    + GKF E+    +D       P 
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
              +N+L+   C   +   AK + E M  +    D D++N  I+  C+++ +    EL  
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    +V D  TY+  + G     + ++A +VF+Q+ +  +  D ++YS L++GLC   
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+ +A+EVF  M K+   L    +  +I G+C   KVD    L       G      TY 
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ GL   +  ++   +L +M  +G   D   Y  LI++          A     M   
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529

Query: 612 GLVPDRETMLSLLHGLADG 630
             V D  T+  + + L DG
Sbjct: 530 RFVGDASTIGLVANMLHDG 548



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 253/535 (47%), Gaps = 6/535 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L AI + K+ F   + + ++M + GI  N+ T N L+      ++I  AL  
Sbjct: 9   SIFEFNKLLSAIAKMKK-FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  P+  T   ++ G     R+ D+V+++ +M ++G + +   +T +I  L  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA+ L   M      P+ +TY  ++N LC+   +D A ++L  M    +     +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           F  I+  LC+    D+++N  ++       P    +++L+ C C+ G++  A  +L  M 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           ++KI  +  ++N  I    +  +  +A +L   M+  S+ PD  TY++ + G C     +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A ++F  + ++    D  +Y+ L++G C+ +++ +  E+F  MS  G    + ++  LI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GL      D A ++     S G      TY+ ++ GL    + +  L V   M      
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           LD+  Y  +I+ M +  K+ D    F  +   G+ P+  T  +++ GL     L    + 
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + K+  D  + DS  YN LI    ++G  + ++ L+  M    +V DA+T GL+ 
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 542



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 203/500 (40%), Gaps = 10/500 (2%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M K    P+   F  ++  +    + D  +S+  +M  LGI   L  Y  +I   CR ++
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +  A+ L   M  L   P  +T   L+N  C   R+ DA  +++ M+ +G  P    F  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GL    K  E+V  ++        P    +  ++   C  G   LA  +L KM   K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I AD   +N  I  LC+   +  A  L   M    + P+  TYS+ +   C    + DA 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++   +  + +  + ++++ L++   +  K  EA ++   M K        ++N LI G 
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C+  ++DKA ++     S        TY  ++ G  K +R +D   +  +M   G   D 
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LIQ +       +    F  MV  G+ PD  T   LL GL +  +L       + 
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           +      LD  +Y  +I G+ K G       L   +  KG  P+  T+  ++     + +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480

Query: 703 DSRRFAF-----DSSSFPDS 717
               +A      +    PDS
Sbjct: 481 LQEAYALLKKMKEDGPLPDS 500



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 105/251 (41%), Gaps = 3/251 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L  A ++F+++  +  F    DTY  +I     +  VE+   L + M             
Sbjct: 306 LDKAKQMFEFMVSKDCFPDL-DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+    +    + A +V   M S G    +  ++++L  +    +     + V+  M K
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK-LEKALEVFDYMQK 423

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           + I  ++     ++E + +  +++   D F  +  KG  PN  T+  +I GL +   + +
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + ++L +M + G   +   Y  +I    R+     +  L + MR+   + D  T   + N
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543

Query: 316 CLCENLRLDDA 326
            L +  RLD +
Sbjct: 544 MLHDG-RLDKS 553


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 244/522 (46%), Gaps = 10/522 (1%)

Query: 117 GLCQNMVKER-YPNVRE--ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
           GL   MVK R  P++ E   L+S + + +  + +  ++ +L  M   G++ S+   + +L
Sbjct: 28  GLFGGMVKSRPLPSIFEFNKLLSAI-AKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLL 86

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
                 KR  +D V +  +MV+ G  P+  T   L+  LF  N+   A+    RM ++GC
Sbjct: 87  NGYCHGKR-ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 145

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN  T+ +V+ GL     +D + ++L +M    I+ ++  +  II  LC+   +++A+ 
Sbjct: 146 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 205

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LFK M    + P+ +TY  LI+CLC   R  DA+ +L DMI   + P    F  ++    
Sbjct: 206 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 265

Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCD 408
           + GKF E+    +D       P    +N+L+   C   +   AK + E M  +    D D
Sbjct: 266 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 325

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I+  C+++ +    EL   M    +V D  TY+  + G     + ++A +VF+Q+
Sbjct: 326 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 385

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            +  +  D ++YS L++GLC   K+ +A+EVF  M K+   L    +  +I G+C   KV
Sbjct: 386 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 445

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D    L       G      TY  ++ GL   +  ++   +L +M  +G   D   Y  L
Sbjct: 446 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 505

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           I++          A     M     V D  T+  + + L DG
Sbjct: 506 IRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 547



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 255/575 (44%), Gaps = 44/575 (7%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           +P  R+ L  +  S+    +++ A+ +   M       S+  FN +L AI + K+   D 
Sbjct: 4   HPRRRDCLF-VGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK--FDL 60

Query: 187 VF---VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           V    +  +M+K G  P++ TL+ LL       RI  A+    +M + G  P++ TF  +
Sbjct: 61  VISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 120

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I GL  +++  ++V+++  M   G Q  L  Y  ++  LC+   ++ A  L   M A  +
Sbjct: 121 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 180

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             D + +  +I+ LC+   +DDA ++ ++M   G+ P    +  ++  LC  G++ ++  
Sbjct: 181 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 240

Query: 364 FLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
            L D      +P+    NAL++     GKF  A    EK+ D                  
Sbjct: 241 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA----EKLHDD----------------- 279

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
                        M+  S+ PD  TY++ + G C     + A ++F  + ++    D  +
Sbjct: 280 -------------MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 326

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G C+ +++ +  E+F  MS  G    + ++  LI GL      D A ++     
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S G      TY+ ++ GL    + +  L V   M      LD+  Y  +I+ M +  K+ 
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           D    F  +   G+ P+  T  +++ GL     L    + + K+  D  + DS  YN LI
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               ++G  + ++ L+  M    +V DA+T GL+ 
Sbjct: 507 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 541



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 129/559 (23%), Positives = 249/559 (44%), Gaps = 54/559 (9%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE--SALDQFRRMHKKGCCPNSRTFEI 242
           D + ++  MVK+  +P++   N LL  + +  + +   +L    +M K G  P+  T   
Sbjct: 25  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSS 84

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ G     R+ D+V+++ +M ++G + +   +T +I  L   NK  EA+ L   M    
Sbjct: 85  LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ +TY  ++N LC+   +D A ++L  M    +     +F  I+  LC+    D+++
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           N  ++       P    +++L+ C C+ G++  A  +L  M ++KI  +  ++N  I   
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  +  +A +L   M+  S+ PD  TY++ + G C     + A ++F  + ++    D 
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y+ L++G C+ +++ +  E+F  MS  G    + ++  LI GL      D A ++   
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S G      TY+ ++ GL    + +  L V   M      LD+  Y  +I+ M +  K
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           + D    F  +   G+ P+  T                                   YN 
Sbjct: 445 VDDGWDLFCSLSLKGVKPNVVT-----------------------------------YNT 469

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-----------EIDSRR 706
           +I+GL  + L  +A  LL  M   G +PD+ T+  L+ + + +           E+ S R
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 529

Query: 707 FAFDSSSFPDSVSDILAEG 725
           F  D+S+    V+++L +G
Sbjct: 530 FVGDASTI-GLVANMLHDG 547



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/479 (22%), Positives = 195/479 (40%), Gaps = 14/479 (2%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF---KMMRALDLMPDEL 308
           ++DD++ + G M        +  +  ++  + +  K +  I L    KMM+ L   P  +
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMK-LGYEPSIV 80

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           T   L+N  C   R+ DA  +++ M+ +G  P    F  ++ GL    K  E+V  ++  
Sbjct: 81  TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                 P    +  ++   C  G   LA  +L KM   KI AD   +N  I  LC+   +
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  L   M    + P+  TYS+ +   C    + DA ++   +  + +  + ++++ L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++   +  K  EA ++   M K        ++N LI G C+  ++DKA ++     S   
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TY  ++ G  K +R +D   +  +M   G   D   Y  LIQ +       +   
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  MV  G+ PD  T   LL GL +  +L       + +      LD  +Y  +I G+ 
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF-----DSSSFPDS 717
           K G       L   +  KG  P+  T+  ++     + +    +A      +    PDS
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 499



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 50/249 (20%), Positives = 104/249 (41%), Gaps = 3/249 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L  A ++F+++  +  F    DTY  +I     +  VE+   L + M             
Sbjct: 305 LDKAKQMFEFMVSKDCFPDL-DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 363

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+    +    + A +V   M S G    +  ++++L  +    +     + V+  M K
Sbjct: 364 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK-LEKALEVFDYMQK 422

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           + I  ++     ++E + +  +++   D F  +  KG  PN  T+  +I GL +   + +
Sbjct: 423 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 482

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + ++L +M + G   +   Y  +I    R+     +  L + MR+   + D  T   + N
Sbjct: 483 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 542

Query: 316 CLCENLRLD 324
            L +  RLD
Sbjct: 543 MLHDG-RLD 550


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 153/598 (25%), Positives = 270/598 (45%), Gaps = 32/598 (5%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++ A+ ++    + GF   V  +N VL A +  KR  +    V+KEM+++ + PNV T N
Sbjct: 150 IDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYN 209

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+        ++ AL  F RM KKGC PN  T+  +I G     ++DD   +L  M   
Sbjct: 210 ILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALK 269

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  L  Y  +I  LCRE +++E   +   M       DE+TY  LI   C+      A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQA 329

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             +  +M+  GL+P+   +  ++  +C+ G  + +  FL+        P    +  L++ 
Sbjct: 330 LVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDG 389

Query: 383 CCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
               G    A  +L++M D   +    ++N  I   C   ++  A  +L  M    + PD
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +YS  + G C+  + ++ALRV R++ A+ +  D+I+YS L++G C+  +  EA ++F 
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFD 509

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G      ++  LI   C+   + KAI+L +     G      TY+ ++ GL K  
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQA 569

Query: 562 R---AKDLLV-----------VLAQMLVEGCA-LDVEAYCILIQSMSEQNKLKDCALFFN 606
           R   AK LL+           V    L+E C+ ++ ++   LI+    +  + +    F 
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M++    PD      ++HG   G  +    S   ++V    +L +     L+  L KEG
Sbjct: 630 SMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEG 689

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAE 724
             ++ + ++  +L    + +A    +LV      EI+ R          D V D+LAE
Sbjct: 690 KVNELNSVIANVLRSCELSEAEQAKVLV------EINHREGNM------DVVLDVLAE 735



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 159/355 (44%), Gaps = 22/355 (6%)

Query: 98  TYCKMILKLGLAGNVEE-MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  +  AGN+    E L Q  V+   PN R    +LV  F     +N A RVL  
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNER-TYTTLVDGFSQKGYMNEAYRVLKE 405

Query: 157 MNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M   GF  SV  +N ++ G  +  K    D + V ++M + G+ P+V + + +L     +
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGK--MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS 463

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             ++ AL   R+M  KG  P++ T+  +I+G     R  ++  +  EM  +G+  +   Y
Sbjct: 464 YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T +I   C E  L++AI+L   M    ++PD +TY  LIN L +  R  +A  +L  +  
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
               P+D  +  ++   C   +F   V               +L++  C  G    A  +
Sbjct: 584 EESVPSDVTYHTLIEN-CSNIEFKSVV---------------SLIKGFCMKGMMTEADQV 627

Query: 396 LEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            E M ++    D  ++N+ I   C   +IRKAY L   MV S  +    T  A V
Sbjct: 628 FESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALV 682


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 265/570 (46%), Gaps = 48/570 (8%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           + V ++ +  ++ +  NV + N  L++L   NR + AL  FR    + C PN  T+ I+I
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           +G  +   +D ++ +L EM   G +     +T ++  LC   ++ EA+  F+ M A D  
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCA 123

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +TY  L++ LC+  + D+A  +L +M+  G  P    F  ++ GLC+ G  +++   
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183

Query: 365 LEDK-------------------CGYVTSPH---------------------NALLECCC 384
           LED                    C    S                       N ++   C
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243

Query: 385 NAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            A     A  +LE M ++  + +  ++ I I  LC+   + +A +LL +MV+    P+  
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TYS  + G CK    +DA  +F+ +  ++   + ++++ L++GLC+ ++I EA +++  M
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-TYTKIMLGLVKLQR 562
            + GC+    ++N LI GLC   +VD+A +L      SG S   + TY+ +  G   L R
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             D   + + ++ +G + D+  Y  LI    + ++  +       M   G  P   T+ +
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK- 681
           +L GL +G+         + + +     D+ +YN+++ G+ +     +A  +L+ ++ K 
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKR 543

Query: 682 --GWVPDATTHGLLVGS--SVGEEIDSRRF 707
              + P ++    LV S   VG+  D+++ 
Sbjct: 544 DRKFNPSSSAVDALVESLCQVGKTDDAKQL 573



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 145/605 (23%), Positives = 251/605 (41%), Gaps = 44/605 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L  AG  +E +G+ + MV +          +L+           A RVL ++
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G   S   F  ++  +  +         V   ++  G  P V   N ++    +   
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++SA      M +KGC PN  TF I+I GL   +RV ++  +L +M   G    +  Y+ 
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC++ ++++A  LF++M   +  P+ +T+  LI+ LC+  R+++A  +   M   G
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLA 392
             P    +  ++ GLC+  + DE+    +       S  NA     L       G+   A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             I   + D+  + D  ++   I   C+     +  EL+  M      P   T SA + G
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 487

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM---SKNGC 508
             +  + E A+++F  ++A+    D++ Y+ +VEG+ +  K  +A+ V   +        
Sbjct: 488 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF 547

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           + SSS+ + L+  LC + K D A +L       G +   S+Y +++ GL +LQR  +   
Sbjct: 548 NPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQ 607

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           V   M+  G A ++    ++I  +    K+ D       M K G  PD ET         
Sbjct: 608 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETC-------- 659

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
                                      N LI G  K G    A  LL+ M   G  P+ T
Sbjct: 660 ---------------------------NTLIGGYCKSGRADLARKLLEEMTEAGLEPNDT 692

Query: 689 THGLL 693
           TH LL
Sbjct: 693 THDLL 697



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 219/494 (44%), Gaps = 15/494 (3%)

Query: 68  RVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER- 126
           R+ +  N +  A K+   V I K F  T   +  +I     A +++    L + M+++  
Sbjct: 205 RLCNKYNSVELASKVL-GVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC 263

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
            PNV    I L+       RV  A ++L  M  GG   +V  ++ V+  +   K+G  D 
Sbjct: 264 VPNVFTFTI-LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLC--KQGQVDD 320

Query: 187 VF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + +++ M +    PNV T N L++ L +  RIE A   + RM + GC P+  T+  +I 
Sbjct: 321 AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID 380

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSF-YTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           GL  + +VD++  +   + + G+    +  Y+ +        ++ +A R+F M+      
Sbjct: 381 GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFS 440

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD  TY  LI   C+  R  +  +++E+M   G  P  +    ++ GL E    + ++  
Sbjct: 441 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQL 500

Query: 365 LED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKM---ADRKIADCDSW-NIPIRW 416
            +      C      +N ++E    A K   A  +LE++    DRK     S  +  +  
Sbjct: 501 FDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVES 560

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+  +   A +LL +M         ++Y+  + G  +L  +++A +VF  + +     +
Sbjct: 561 LCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPE 620

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             + + ++  LC   K+ +A E+   MSK GC     + N LI G C   + D A +L  
Sbjct: 621 ISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLE 680

Query: 537 LAYSSGTSYTTSTY 550
               +G     +T+
Sbjct: 681 EMTEAGLEPNDTTH 694



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 41/231 (17%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M   G  P V+TL+ +L  LFE N  E A+  F  M  +GC  ++  + +V++G+   S+
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528

Query: 253 --------------------------------------VDDSVSILGEMFDLGIQLELSF 274
                                                  DD+  +L +M + G    +S 
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSS 588

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++  L R  + +EA ++F+ M +    P+  T   +I+ LC   ++DDA ++++ M 
Sbjct: 589 YNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 648

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA---LLEC 382
            +G  P  +    ++ G C+ G+ D +   LE+       P++    LLEC
Sbjct: 649 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 699


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 277/603 (45%), Gaps = 8/603 (1%)

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVF-SFVNHYRVNGAMRVLVNMNSG 160
           ++++  L  N EE         K R   +  A  S+V  +F  +  V  A  +L +M   
Sbjct: 249 IMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDK 308

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+  S   F  V+GA V++     + + +  EMV  G+  NV     L++   + +++ S
Sbjct: 309 GWVPSEGTFTSVIGACVKQG-NMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVS 367

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL+ F +M++ G  PN  T+ ++I+    N  +  +  +  +M +  I   +     +I 
Sbjct: 368 ALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIR 427

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
              +    EEA +LF    A D+  +  TY  L++ LC+  ++ +A  + + M+  GL P
Sbjct: 428 GFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAP 486

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCIL 396
           T   +  ++ G C  G  D + +   D   CG   +   ++ L++     G    A  + 
Sbjct: 487 TKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVF 546

Query: 397 EKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M D  I   D ++NI I  LC+     +A ++L + V    VP C TY++ + G  K 
Sbjct: 547 DRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKE 606

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            +   AL  +R++    +  + I+Y+ L+ G C+      A+++   M   G  L  +++
Sbjct: 607 GSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAY 666

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI G C  + ++ A  L S     G S  +  Y  ++ G   L   +  L +  +ML 
Sbjct: 667 GALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLG 726

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           EG + D++ Y  LI  + ++ +L      ++ M   G++PD      L++GL    QL  
Sbjct: 727 EGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLEN 786

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
               + ++  DS   +  +YN LI G +K G   +A  L + ML KG  P+ TT+ +L+ 
Sbjct: 787 AQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILIN 846

Query: 696 SSV 698
             +
Sbjct: 847 GKI 849



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 215/487 (44%), Gaps = 4/487 (0%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +E A    + M  KG  P+  TF  VI   +    + +++ +  EM   G+Q+ +   T 
Sbjct: 295 VELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATT 354

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++   C+++KL  A+  F  M      P+ +TY  LI   C+N  +  A D+   M    
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS---PHNALLECCCNAGKFFLAKC 394
           + PT  +   ++RG  +V   +E+    ++      +    +N+LL   C  GK   A  
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATT 474

Query: 395 ILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           + +KM D+ +A    S+N  I   C    +  A  +   M+   + P+  TYS  + G  
Sbjct: 475 LWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYF 534

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K  + E A  VF ++  +++V    +Y+  + GLC+V + +EA ++     + G      
Sbjct: 535 KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL 594

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N ++ G      V  A+        SG S    TYT ++ G  K       L +  +M
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEM 654

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G  LD+ AY  LI    ++  ++  +  F+ ++  GL P+     SL+ G  + + +
Sbjct: 655 RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNM 714

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
               +   +++ +    D   Y  LI+GL KEG    A  L   M  KG +PD   + +L
Sbjct: 715 EAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVL 774

Query: 694 VGSSVGE 700
           +    G+
Sbjct: 775 INGLCGK 781


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 240/536 (44%), Gaps = 37/536 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + + +K GIVPNV+T N ++      N+ + A++    M K  C P++ T+  ++  L 
Sbjct: 195 AFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLC 254

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R+ D+  +L +M   G+    + Y  ++   C+   L+EA  + ++M   +L+PD  
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LIN LC   R+++A  + ++M  + L P      D+V                   
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLP------DVVS------------------ 350

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
                  +N L+  C    K   A  +LE+M+++ +  +  + NI ++W C+  ++  A 
Sbjct: 351 -------YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
             + +M  S   PDC TY+  + G CK  N  +A R   ++  +++ +DS++ + ++  L
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+ +K+ EA ++     K G  +   S+  LI G      VD+A++L           +T
Sbjct: 464 CREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  I+ GL +  + +  +  L ++L  G   D   Y  ++     +  ++    F N 
Sbjct: 524 VTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV+    PD  T   LL GL     L       N  VS  + +D+  YN LI  L KEG 
Sbjct: 584 MVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR 643

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRF---AFDSSSFPDSV 718
              A  LL  M  K   PD  T+  ++   +  G   ++  F     +  + PD V
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 265/573 (46%), Gaps = 28/573 (4%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           +Q    H A    K + +L L  N+     L  ++V  RYP+      S+ FS       
Sbjct: 146 VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV--RYPSSH----SVSFS---REAF 196

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           N A+++       G   +V+ FN+V+ G  +E K  F D V     M K    P+  T N
Sbjct: 197 NDAIKL-------GIVPNVNTFNIVIYGYCLENK--FKDAVEFLNVMGKYNCSPDNVTYN 247

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            +L+ L +  R+  A D    M  +G  PN  T+ I++ G      + ++ +++  M   
Sbjct: 248 TILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            +  ++  Y  +I  LC E ++EEA +L   M  L L+PD ++Y  LIN   E  ++ +A
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
             +LE+M   G+ P       +V+  C+ GK D++ N +   ++ G+  SP    +N L+
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF--SPDCVTYNTLI 425

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
              C AG    A   +++M  + +  D  + N  +R LC  +++ +AY+LL         
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            D  +Y   ++G  K  N + AL+++ ++  + ++  +++Y+ ++ GLCQ  K  +A+  
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              + ++G     +++N +++G C    V+KA +  +    +       T   ++ GL  
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
               +  L +    + +G A+D   Y  LI S+ ++ +L D     + M +  L PD  T
Sbjct: 606 EGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
             +++  L D  ++      ++K++    + D 
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKMLEKGNLPDQ 698



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 216/495 (43%), Gaps = 40/495 (8%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           YCKM   L  A NV E+  + QN +    P+V    + L+    N  R+  A ++   M 
Sbjct: 288 YCKMGW-LKEAANVIEL--MTQNNL---LPDVWTYNM-LINGLCNEGRIEEAFKLRDEME 340

Query: 159 SGGFKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           +   KL  DV  +N ++   +E  +    F  + +EM + G+ PN  T N +++   +  
Sbjct: 341 N--LKLLPDVVSYNTLINGCLEWSKISEAFKLL-EEMSEKGVKPNAVTHNIMVKWYCKEG 397

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A +   +M + G  P+  T+  +I G      + ++   + EM    ++++     
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            I+  LCRE KLEEA +L    R      DE++Y  LI    ++  +D A  + ++M   
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT--SPHNALLECCCNAGKFFLA 392
            + P+   +  I+ GLC+ GK +++++ L +  + G +   + +N +L   C  G    A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                KM +     D  + NI +R LC    + KA +L    V      D  TY+  +  
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG---- 507
            CK    +DA  +  ++  + L  D  +Y+ ++  L    +I EA E    M + G    
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697

Query: 508 -------------------CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
                                 SS +++  I  LC   K   A+R+   +   G +   S
Sbjct: 698 QVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 549 TYTKIMLGLVKLQRA 563
           TY  +M GL+K +++
Sbjct: 758 TYINLMDGLIKRRKS 772


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 182/743 (24%), Positives = 320/743 (43%), Gaps = 60/743 (8%)

Query: 35  LSSETDMIKSHQTTDYEAKIQS--LRHNLSPDHLIRVLDNTNDLSSA-----LKIFKWVS 87
           +++E   + S  T D++  I +  +   LSP  L  +L   N          L  F W  
Sbjct: 51  VAAEVATLLSRCTGDWKQVIAASDIPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYWS- 109

Query: 88  IQKRFQHTA---DTYCKMILKLGLAGNVEEMEGLCQNMVKERYP-------NVREALIS- 136
            + R   +A   D +  + + L  AG   +  GL   M++  YP       +V  AL   
Sbjct: 110 -RTRLAPSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMIRA-YPTPPLVLSSVHRALSGS 167

Query: 137 -----------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE------- 178
                      LV ++    RV     V++ M   G   S+   N +L  ++        
Sbjct: 168 DQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLL 227

Query: 179 -EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            + RGF         M  AGI P+V T + L+E   +   +ESA      M + GC  N 
Sbjct: 228 WKVRGF---------MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNV 278

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            T+  +I GL     ++++     EM D G+  +   Y  II  LC+  + ++A  L   
Sbjct: 279 VTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDE 338

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    LMP+ + Y  LI+        D+A  I+++M   G+ P    + +++RGLC++G+
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398

Query: 358 FDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
              +   L+   K GY+  T  +N ++E          A  +L +M    I+ +  +++I
Sbjct: 399 MGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSI 458

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC+  E  +A  LL +M+   + P+   Y+  + G C+  ++  A    ++++ ++
Sbjct: 459 IINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTREN 518

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  D   Y+ L+ GL  V K+ EA+E +  M + G   +  ++  LI+G  +   ++KA 
Sbjct: 519 LTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAE 578

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +L     +SG +     Y +I+ G  K    + +   L  ML +G   D   Y I+I ++
Sbjct: 579 QLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNL 638

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
           S    ++      +V+ K GLVPD     SL+ G    + +      ++++         
Sbjct: 639 SSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGI 698

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRF 707
           S YN LI+G  K    S A  + + ++ KG  P+  T+  L+        + + ID    
Sbjct: 699 SCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNE 758

Query: 708 AFDSSSFPDS-VSDILAEGLGNT 729
                  PD+ V  +LA G  N+
Sbjct: 759 MLTEGVAPDAFVYSVLAAGCSNS 781



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 157/627 (25%), Positives = 270/627 (43%), Gaps = 23/627 (3%)

Query: 60  NLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
            +SPD      LI       DL SA K+ + +  +        TY  +I  L  AG +EE
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR-ETGCSLNVVTYNTLIGGLCRAGAIEE 296

Query: 115 MEGLCQNMVKERYPNVREALI--SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
             G  + M  E Y  V +     +++       R + A  +L  M+  G   +V V++ +
Sbjct: 297 AFGYKKEM--EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354

Query: 173 LGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           +   +  ++G AD  F + KEM  AG+ PN  T + L+  L +  R+  A    ++M K 
Sbjct: 355 IDGFM--RQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G   ++ T+ +VI+G +     +++  +L EM   GI   +  Y+ II  LC+  + E A
Sbjct: 413 GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERA 472

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L + M A  L P+   Y  LI+  C       A + L+ M    LTP    +  ++ G
Sbjct: 473 SGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIG 532

Query: 352 LCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           L  VGK DE++ + ++       P    +  L+     AG    A+ +L +M +  +   
Sbjct: 533 LSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPN 592

Query: 408 DSWNIPI-RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           D     I     +++ + K    L  M+   ++PD   Y   +       + + A+ V  
Sbjct: 593 DFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLS 652

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +    LV DS+ Y  L+ G C+   + +AV +   M+K G     S +N LI G C   
Sbjct: 653 VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSD 712

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            +  A  + +     G      TYT ++ G  K    +D + +  +ML EG A D   Y 
Sbjct: 713 DISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYS 772

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           +L    S    L+        M+  G      +  +L+HG     +L      ++ ++ D
Sbjct: 773 VLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMM-D 830

Query: 647 SEVLDS--SMYNILINGLWKEGLTSQA 671
            +++ S  ++ NI+I GL + G  S+A
Sbjct: 831 KDIVPSLLTVENIVI-GLGEAGKLSEA 856



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 228/542 (42%), Gaps = 14/542 (2%)

Query: 161 GFKLSVDVFNVV-----LGAIVEE--KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVL 212
           G+K  ++ + +V      GAI+    KRG  D    +  EM  AG++PNV   + L++  
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
                 + A    + M   G  PN  T++ +I+GL    R+  +  IL +M  +G   + 
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y  +I    R++  EEA  L   MR   + P+  TY  +IN LC+    + A+ +LE 
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           MI  GL P   V+  ++ G C  G F  +   L+       +P    +N+L+    N GK
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538

Query: 389 FFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A    ++M ++     D ++   I        + KA +LL +M+ S + P+   Y+ 
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G  K  N E      + +  + L+ D+  Y  ++  L     +  AV V   + KNG
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
               S  +  LI G C    ++KA+ L       G     S Y  ++ G  K        
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +   ++ +G   +   Y  LI    +   ++D    +N M+  G+ PD      L  G 
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGC 778

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           ++   L        ++++    + SS +N L++G  K G   +    L +M+ K  VP  
Sbjct: 779 SNSGDLQQALFITEEMIARGYAIISS-FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSL 837

Query: 688 TT 689
            T
Sbjct: 838 LT 839



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 192/470 (40%), Gaps = 45/470 (9%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+  A R+L  M   G+      +N+V+   + +      F+ +  EM K GI PNV T 
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLL-NEMRKGGISPNVYTY 456

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++  L +    E A     +M   G  PN+  +  +I G         +   L +M  
Sbjct: 457 SIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTR 516

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             +  +L  Y  +I  L    K++EAI  +  M      P++ TY  LI+       L+ 
Sbjct: 517 ENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEK 576

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRG---------------------------------- 351
           A  +L  M+  GL P D ++  I+ G                                  
Sbjct: 577 AEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIH 636

Query: 352 -LCEVGKFDESVNFLE--DKCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRKIAD 406
            L   G    +V+ L   +K G V     + +L+   C A     A  +L++MA + I  
Sbjct: 637 NLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEP 696

Query: 407 CDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
             S +N  I   C++++I  A  +   ++   + P+C TY+  + G CK  +  DA+ ++
Sbjct: 697 GISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLY 756

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++  + +  D+  YS L  G      + +A+ +   M   G ++ SS FN L++G C  
Sbjct: 757 NEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISS-FNTLVHGFCKR 815

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL---VKLQRAKDLLVVLAQ 572
            K+ + ++   +        +  T   I++GL    KL  A  + V L Q
Sbjct: 816 GKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQ 865



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 10/320 (3%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M+ +G+ PN      +LE  F+++ +E      + M +KG  P++R + IVI  L ++ 
Sbjct: 583 QMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSG 642

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            +  +VS+L  +   G+  +   Y  +I   C+   +E+A+ L   M    + P    Y 
Sbjct: 643 HMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYN 702

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+  C++  +  A +I   +I  GL P    +  ++ G C+ G   ++++   +    
Sbjct: 703 ALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE 762

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
             +P    ++ L   C N+G    A  I E+M  R  A   S+N  +   C+  ++++  
Sbjct: 763 GVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETV 822

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF---RQVSAQSLVLDSIS--YSK 482
           + L  M+   +VP   T    V+G  +     +A  +F   +Q +A     D +S  ++ 
Sbjct: 823 KFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTD 882

Query: 483 LV-EGLCQVEKITEAVEVFC 501
           ++ +GL  ++ I   ++  C
Sbjct: 883 MINQGLVPLDVIHNMIQSHC 902


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 263/608 (43%), Gaps = 65/608 (10%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           +V +     RV+ A+ +   M+     L+    + VL  +++  R   + + VY+E  + 
Sbjct: 151 VVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGR-IDEALQVYRENRRE 209

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
              P + TLN LLE      +++ A +  R M  + C P+  ++  V+ GL    RV+++
Sbjct: 210 ---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEA 266

Query: 257 VSILGE------MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           V + G+               L  Y  +I  LC+ ++++EA+++F+ M   ++ PD  +Y
Sbjct: 267 VRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSY 326

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--K 368
             LI+ L +  +L+DA ++ + ++  G+TP+   +  ++ GLC    FD++     D  +
Sbjct: 327 GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 386

Query: 369 CGYVTSP--HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRK 425
            G   SP  +N +++  C  G    A  +++KM  D  + D  ++N  +  LC++  + +
Sbjct: 387 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 446

Query: 426 A--------------------------------------------YELLGRMVVSSVVPD 441
           A                                            + LL RM     VPD
Sbjct: 447 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPD 506

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TYS  + G C +   +DA  +   +  +      ++ + L+ GLC+  +I EA EV  
Sbjct: 507 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 566

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M  +G S    ++N L++G C   + ++A  L S   + G +    TYT ++ GL K  
Sbjct: 567 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 626

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R  +   V AQM   GCA ++  Y  LI       ++      F  MV AG+ PD     
Sbjct: 627 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 686

Query: 622 SLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           +L   L    +    L ++  G   L   SE     +Y   ++GL + G    A   +  
Sbjct: 687 TLAAELCKSGRSARALEILREGRESL--RSEAWGDEVYRFAVDGLLEAGKMEMALGFVRD 744

Query: 678 MLGKGWVP 685
           M+  G +P
Sbjct: 745 MVRGGQLP 752



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 244/531 (45%), Gaps = 32/531 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N+V+  + +  R   + V ++++M +  + P+  +   L++ L +  ++  A + F+++
Sbjct: 291 YNIVILGLCQNDR-IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL 349

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G  P++  +  +I GL   +  DD+  +  +M   G       Y  +I   C+   L
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           EEA  L K M     +PD +TY  +++ LC++ R+++A  +  +M  +G TP       I
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI 469

Query: 349 VRGLCEV---------GKFDESVNFLEDKC--GYVTS--PHNALLECCCNAGKFFLAKCI 395
           + GLC+          GK DE+   L+     G+V     ++ L+   C+  +   A+ +
Sbjct: 470 ILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           LE M  R+      + N  I  LC+   I++A E+L  MV S   PD  TY+  V G C+
Sbjct: 530 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 589

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               E A  +   + A+ L  + ++Y+ LV GLC+  ++ EA  VF  M  +GC+ +  +
Sbjct: 590 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 649

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL--AQ 572
           +  LI G C   +VD  ++L      +G S     Y  +   L K  R+   L +L   +
Sbjct: 650 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR 709

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
             +   A   E Y   +  + E  K++    F   MV+ G +P  E   SL+ GL    Q
Sbjct: 710 ESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 769

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
                 G  + V + E++D      L  G    G   +A+  ++ M+GKG+
Sbjct: 770 -----GGEARAVLE-EIMD------LAYGGKARG---KAAKFVEEMVGKGY 805



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 239/557 (42%), Gaps = 76/557 (13%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P  D  N L++ L +    E+     + M  +GC P+S TF  ++ GL    ++D++  +
Sbjct: 42  PYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELV 101

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP--DELTYEELINCL 317
           + EM    I    +  + +   LC    +E A +L      L++MP  +   Y  ++  L
Sbjct: 102 MDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQL------LEIMPVANSSAYNIVVVAL 155

Query: 318 CENLRLDDANDILEDM----IVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYV 372
           C+  R+DDA ++   M    I +     D V V    GL + G+ DE++  + E++    
Sbjct: 156 CKAARVDDALELARTMSEKRIPLAAGSLDSVLV----GLMDSGRIDEALQVYRENRREPC 211

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIAD------------CDS----------- 409
               N LLE  C+ G+   A+ +L  M D + A             C +           
Sbjct: 212 LVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFG 271

Query: 410 -------------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                              +NI I  LC+N+ I +A ++  +M   +V PD  +Y   + 
Sbjct: 272 DRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILID 331

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  K     DA  +F+++    +   +++Y+ L+ GLC      +A E+F  M++ GC  
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 391

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           S  ++N++I   C    +++A  L       G      TY  +M GL K  R ++ L++ 
Sbjct: 392 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 451

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQN---------KLKDCALFFNVMVKAGLVPDRETML 621
            +M   GC  +  ++  +I  + +Q+         KL +       M   G VPD  T  
Sbjct: 452 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYS 511

Query: 622 SLLHGLADGSQL----HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           +L+ GL   +++    HL+   + +    + V      N LI+GL K G   +A  +LD 
Sbjct: 512 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ----NTLIHGLCKAGRIKEAREVLDA 567

Query: 678 MLGKGWVPDATTHGLLV 694
           M+  G  PD  T+  LV
Sbjct: 568 MVSSGQSPDVVTYNTLV 584



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 233/534 (43%), Gaps = 26/534 (4%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           RG  +  F   E++    V N    N ++  L +  R++ AL+  R M +K     + + 
Sbjct: 127 RGSMERAFQLLEIMP---VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSL 183

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
           + V+ GL+ + R+D+++ +  E       + L+    ++   C   ++++A  L + M  
Sbjct: 184 DSVLVGLMDSGRIDEALQVYRENRREPCLVTLNV---LLEGFCSRGQVDKARELLRAMPD 240

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV------FVDIVRGLCE 354
            +  PDE++Y  +++ LC+  R+++A  +  D  +   + +         +  ++ GLC+
Sbjct: 241 EECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQ 300

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-S 409
             + DE+V   E       SP    +  L++    AGK   A+ + +K+    +     +
Sbjct: 301 NDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVA 360

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +   I  LC       A EL   M      P   TY+  +   CK    E+A  + +++ 
Sbjct: 361 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV- 528
               V D ++Y+ +++GLC+  ++ EA+ +F  M + GC+ +  S N +I GLC   K+ 
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480

Query: 529 --------DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
                   D+A RL       G      TY+ ++ GL  + R  D   +L  M+   C  
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            V     LI  + +  ++K+     + MV +G  PD  T  +L+HG     Q       +
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +V+     +   Y  L++GL K     +A  +   M   G  P+  T+  L+
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 654



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 187/475 (39%), Gaps = 48/475 (10%)

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           MF  GI      +T +I   C   +  EA+++F +M      P    Y  LI+ L +   
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQE 59

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA---- 378
            +    +++ M+  G  P    F  I+ GLC+ GK DE+   +++    +  P+ A    
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           L    C  G    A  +LE M    +A+  ++NI +  LC+   +  A EL  R +    
Sbjct: 120 LAHELCLRGSMERAFQLLEIM---PVANSSAYNIVVVALCKAARVDDALEL-ARTMSEKR 175

Query: 439 VPDCA---------------------------------TYSAFVLGKCKLCNYEDALRVF 465
           +P  A                                 T +  + G C     + A  + 
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELL 235

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF------CCMSKNGCSLSSSSFNILI 519
           R +  +    D +SY  +++GLC+  ++ EAV +F         S +    S   +NI+I
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GLC   ++D+A+++         S  + +Y  ++ GL K  +  D   +  ++L  G  
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
               AY  LI  +   N   D    F  M + G  P   T   ++        L      
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 415

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           I K++ D  V D   YN +++GL K     +A  L + M   G  P+  +H  ++
Sbjct: 416 IKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 17/284 (5%)

Query: 94  HTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           H  D  TY  +I  L     V++   L ++MVK +         +L+       R+  A 
Sbjct: 503 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 562

Query: 152 RVLVNMNSGGFKLSVDVFNVVL-----GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
            VL  M S G    V  +N ++         E  R          +MV  G+ PNV T  
Sbjct: 563 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL------LSDMVARGLAPNVVTYT 616

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L + NR+  A   F +M   GC PN  T+  +I G  +  +VD  + + GEM   
Sbjct: 617 ALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 676

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL---DLMPDELTYEELINCLCENLRL 323
           GI  +   Y  +   LC+  +   A+ + +  R     +   DE+ Y   ++ L E  ++
Sbjct: 677 GISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDGLLEAGKM 735

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + A   + DM+  G  P  +    +V GLC+ G+  E+   LE+
Sbjct: 736 EMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 779


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 292/657 (44%), Gaps = 38/657 (5%)

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVR 131
            ND++SA  +F  +  +K  +    +Y  +I  L   G V+E   + + M ++  YP VR
Sbjct: 17  NNDVNSAFSVFNMMP-KKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVR 75

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
              + +V +     R   A+ +   M   G + ++  + V++ A+ +E +   +   +  
Sbjct: 76  TYTV-IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETK-LEEGRRILD 133

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EMV+ G+VP+V T N L++   +   +E+A +    MH   C PN RT+  +I G     
Sbjct: 134 EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKK 193

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V  ++++L +M +  +   +  Y  +I   C+   L+ A RL  +M    ++PD+ TY 
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----D 367
             I+ LC+  R+++AN +   +   G+   + ++  ++ G C+ GK D++ + L+    +
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
            C   +S +NAL++  C   K   A  ++E M  + +     ++ I I  + +  +   A
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYA 373

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           + +L +MV S   PD   Y+AF+   C   N ++A  +   +  + ++ D+++Y+ +++ 
Sbjct: 374 HRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDA 433

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI--------------YGLC--------- 523
              +  +  A +V   M   GC  S  +++ LI                LC         
Sbjct: 434 YGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFA 493

Query: 524 ------VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
                  M K + A+ L       G S   +TY K+++GL K+ R      +   M   G
Sbjct: 494 DVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERG 553

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
            +     Y  L+    E     D       M++ G +P  E++  L  GL +        
Sbjct: 554 VSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAK 613

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              + L+      D   + ILI+GL K GL+   S LL +M  +G      T+ +L+
Sbjct: 614 VVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 223/508 (43%), Gaps = 33/508 (6%)

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
            N + SA   F  M KKGC  N  ++  +I GL    RVD+ ++I  +M +      +  
Sbjct: 17  NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT I+  L    +  EAI LF  MR     P+  TY  +IN +C+  +L++   IL++M+
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             GL P+   +  ++ G C+ G  + +   L+            +    CN  +      
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILD-----------LMHSNSCNPNE------ 179

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                         ++N  I   C  + + +A  LL +M+ S + P   TY++ + G+CK
Sbjct: 180 -------------RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCK 226

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           +   + A R+   ++   +V D  +YS  ++ LC+  +I EA  +F  + + G   +   
Sbjct: 227 IGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVI 286

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI G C   K+D A  L     +      +STY  ++ GL K ++ ++ L+++  M+
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMI 346

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G    V  Y ILI +M ++          + MV +G  PD     + +H       + 
Sbjct: 347 QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                ++ +     + D+  Y ++I+     GL + A  +L  M   G  P   T+  L+
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466

Query: 695 GSSVGEEIDSRRFAFDSSSFPDSVSDIL 722
              + EE+  +   + + +  DS+ ++ 
Sbjct: 467 KHLLKEELTKK---YKNVALCDSIPNVF 491



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/568 (22%), Positives = 235/568 (41%), Gaps = 36/568 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  MI  +     +EE   +   MV++          +L+  +     V  A  +L  M
Sbjct: 111 TYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           +S     +   +N ++     +K        + K M+++ + P+V T N L+    +   
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMALLSK-MLESRLTPSVVTYNSLIHGQCKIGY 229

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++SA      M++ G  P+  T+ + I  L    R++++  +   + + GI+     YT 
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C+  K+++A  L   M   D +P+  TY  LI+ LC+  ++ +A  ++E MI  G
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           L  T   +  ++  + + G FD +   L+        P    + A +   C  G    A+
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV--- 449
            ++  M +R +  D  ++ + I        +  A+++L RM  +   P   TYS  +   
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469

Query: 450 -----------LGKC---------------KLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
                      +  C               K+  +E AL +F ++       +  +Y+KL
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKL 529

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC+V ++  A ++F  M++ G S S + +N L+   C +     A+RL       G 
Sbjct: 530 IIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGH 589

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                +   +  GL +    +   VV + +L  G   D  A+ ILI  + +      C+ 
Sbjct: 590 LPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSE 649

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGS 631
              VM   G     +T   L+ GL DG+
Sbjct: 650 LLGVMEARGCQIHPQTYRMLIEGL-DGT 676


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 158/653 (24%), Positives = 288/653 (44%), Gaps = 29/653 (4%)

Query: 61  LSPDHLIRVLDN-TNDLSSALKIFKWVSIQ-KRFQHTADTYCKMILKLGLAGNVEEMEGL 118
           L+P  ++ VL    NDLS   +    +      F+HT+ +   MI  L  +G + + +  
Sbjct: 66  LNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 125

Query: 119 CQNMVKERYPNVREALISLV-----------------FSFVNHYRVNGAMRVLVNMNSGG 161
              M++    +  E + SLV                  +FV   ++  A      + S G
Sbjct: 126 VLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKG 185

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           + +S+D  N ++G++V  + G+ +  + +Y+E+ ++G+  NV TLN ++  L +  ++E 
Sbjct: 186 YTVSIDACNALIGSLV--RIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEK 243

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
                  + +KG  P+  T+  +I    +   ++++  ++  M   G    +  Y  +I 
Sbjct: 244 VGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVIN 303

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+  K E A  +F  M    L PD  TY  L+   C+     +  +I  DM    + P
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCIL 396
               F  ++      G  D+++ +          P N     L++  C  G    A  + 
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  +  A D  ++N  +  LC+ + + +A +L   M    + PD  T +  + G CKL
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N ++A+ +F+++  + + LD ++Y+ L++G  +V  I  A E++  M       +  SF
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +IL+  LC    + +A R+     S     T      ++ G  +   A D  + L +M+ 
Sbjct: 544 SILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMIS 603

Query: 576 EGCALDVEAYCILIQS-MSEQNKLKDCALFFNVMVK-AGLVPDRETMLSLLHGLADGSQL 633
           EG   D  +Y  LI   + E+N  K   L   +  K  GLVPD  T  S+LHG    +Q+
Sbjct: 604 EGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQM 663

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               + + K++      D S Y  LING   +   ++A    D ML +G+ PD
Sbjct: 664 KEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/512 (20%), Positives = 211/512 (41%), Gaps = 38/512 (7%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N    + L+    +  ++  A + F  +  KG   +      +I  L+    V+ +  I 
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            E+   G+ + +     ++  LC++ K+E+       ++   + PD +TY  LI+     
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
             +++A +++  M   G +P    +  ++ GLC+ GK++ +     +      SP    +
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            +LL   C  G     + I   M  R                                  
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSR---------------------------------- 359

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            VVPD   +S+ +    +  N + AL  F  V    L+ D++ Y+ L++G C+   I+EA
Sbjct: 360 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEA 419

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           + +   M + GC++   ++N +++GLC  + + +A +L +     G    + T T ++ G
Sbjct: 420 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDG 479

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
             KL   ++ + +  +M  +   LDV  Y  L+    +   +      +  MV   ++P 
Sbjct: 480 HCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 539

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             +   L++ L     L       ++++S S      + N +I G  + G  S     L+
Sbjct: 540 PISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLE 599

Query: 677 LMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA 708
            M+ +G+VPD  ++  L+   V EE  S+ F 
Sbjct: 600 KMISEGFVPDCISYNTLIYGFVKEENMSKAFG 631



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 39/270 (14%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           +L +A+++FK +  +KR +    TY  ++   G  G+++  + +  +MV +       + 
Sbjct: 485 NLQNAMELFKKMK-EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
             LV +  +   ++ A RV   M S   K +V + N ++             +F+ K M+
Sbjct: 544 SILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK-MI 602

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK--GCCPNSRTFEIVIKGLIANSR 252
             G VP+  + N L+    +   +  A    ++M +K  G  P+  T+  ++ G      
Sbjct: 603 SEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGF----- 657

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
                                         CREN+++EA  + + M    + PD  TY  
Sbjct: 658 ------------------------------CRENQMKEAEAVLRKMIERGVNPDRSTYTS 687

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTD 342
           LIN       L +A    ++M+  G +P D
Sbjct: 688 LINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVL 212
           L  M S GF      +N ++   V+E+     F  V K E  + G+VP+V T N +L   
Sbjct: 598 LEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGF 657

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
              N+++ A    R+M ++G  P+  T+  +I G ++   + ++     EM   G   + 
Sbjct: 658 CRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717

Query: 273 SF 274
            F
Sbjct: 718 KF 719


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 230/498 (46%), Gaps = 34/498 (6%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A+ +L  M   G++ S+   + +L      KR  +D V +  +MV+ 
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEM 146

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+  T   L+  LF  N+   A+    RM ++GC PN  T+ +V+ GL      D +
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +++L +M    I+ ++  +  II  LC+   +++A+ LFK M    + P+ +TY  LI+C
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   R  DA+ +L DMI   + P    F                               
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTF------------------------------- 295

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NAL++     GKF  A+ + + M  R I  D  ++N  +   C ++ + KA ++   MV 
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 355

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD  TY+  + G CK    ED   +FR++S + LV D+++Y+ L++GL        
Sbjct: 356 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 415

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A +VF  M  +G      +++IL+ GLC   K++KA+ +      S        YT ++ 
Sbjct: 416 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 475

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G+ K  +  D   +   + ++G   +V  Y  +I  +  +  L++       M + G +P
Sbjct: 476 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 535

Query: 616 DRETMLSLLHG-LADGSQ 632
           +  T  +L+   L DG +
Sbjct: 536 NSGTYNTLIRAHLRDGDK 553



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 252/534 (47%), Gaps = 6/534 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L AI + K+ F   + + ++M +  IV  + T N L+      ++I  AL  
Sbjct: 46  SIVEFNKLLSAIAKMKK-FDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  P+  T   ++ G     R+ D+V+++ +M ++G + +   +T +I  L  
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA+ L   M      P+ +TY  ++N LC+    D A ++L  M    +     +
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           F  I+  LC+    D+++N  ++       P    +++L+ C C+ G++  A  +L  M 
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           ++KI  +  ++N  I    +  +  +A +L   M+  S+ PD  TY++ V G C     +
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A ++F  + ++    D ++Y+ L++G C+ +++ +  E+F  MS  G    + ++  LI
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GL      D A ++     S G      TY+ ++ GL    + +  L V   M      
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           LD+  Y  +I+ M +  K+ D    F  +   G+ P+  T  +++ GL     L    + 
Sbjct: 465 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 524

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           + K+  D  + +S  YN LI    ++G  + ++ L+  M    +V DA+T GL+
Sbjct: 525 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 578



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 201/483 (41%), Gaps = 5/483 (1%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+  F  M K    P+   F  ++  +    + D  +S+  +M  L I   L  Y 
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR +++  A+ L   M  L   P  +T   L+N  C   R+ DA  +++ M+ +
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P    F  ++ GL    K  E+V  ++        P    +  ++   C  G   LA
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L KM   KI AD   +N  I  LC+   +  A  L   M    + P+  TYS+ +  
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C    + DA ++   +  + +  + ++++ L++   +  K  EA +++  M K      
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++N L+ G C+  ++DKA ++     S        TY  ++ G  K +R +D   +  
Sbjct: 327 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 386

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   G   D   Y  LIQ +       +    F  MV  G+ PD  T   LL GL +  
Sbjct: 387 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 446

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +L       + +      LD  +Y  +I G+ K G       L   +  KG  P+  T+ 
Sbjct: 447 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 506

Query: 692 LLV 694
            ++
Sbjct: 507 TMI 509



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 160/395 (40%), Gaps = 15/395 (3%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD------ESVN 363
           Y E++     +++LDDA  +   M+     P+   F  ++  + ++ KFD      E + 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA----DRKIADCDSWNIPIRWLCE 419
            LE   G  T  +N L+ C C   +  LA  +L KM     +  I    S    +   C 
Sbjct: 75  RLEIVHGLYT--YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL---LNGYCH 129

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            + I  A  L+ +MV     PD  T++  + G        +A+ +  ++  +    + ++
Sbjct: 130 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 189

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y  +V GLC+      A+ +   M           FN +I  LC  R VD A+ L     
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 249

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + G      TY+ ++  L    R  D   +L+ M+ +    ++  +  LI +  ++ K  
Sbjct: 250 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 309

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    ++ M+K  + PD  T  SL++G     +L         +VS     D   YN LI
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G  K       + L   M  +G V D  T+  L+
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 36/173 (20%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK------------------ 230
           V+K+MV  G+ P++ T + LL+ L    ++E AL+ F  M K                  
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 478

Query: 231 -----------------KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
                            KG  PN  T+  +I GL +   + ++ ++L +M + G      
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 538

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            Y  +I    R+     +  L + MR+   + D  T   + N L +  RLD +
Sbjct: 539 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG-RLDKS 590


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 161/671 (23%), Positives = 282/671 (42%), Gaps = 76/671 (11%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
           VL +   +S+ +++F W+  QK +QH+  TY   +  L  A   +      Q M +  YP
Sbjct: 11  VLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP 70

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
                   ++        ++ A  +L  +   G KL+V  ++VV+    +  R   D + 
Sbjct: 71  PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR-VDDALE 129

Query: 189 VYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           ++K M    G VP+V T N LL+ L    R+  A   F  M K GC PN  ++  ++ GL
Sbjct: 130 IFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R+D++  +  EM +     +L  YT  +  LC+ N++ EA    + M       D 
Sbjct: 190 CKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADA 249

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + +  +I  LC+    ++A +                   ++  LC  G  DE+    E+
Sbjct: 250 VAFSTVIGILCKKGHAEEAQN------------------QMIEHLCRSGMLDEACKTFEE 291

Query: 368 KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADC----DSWNIPIRWLCE 419
                  P     N L+   C + +      + ++M   K   C    +++NI +  LC+
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            +++ +A EL+  M    + PD  TYSA V G CKL   + A  +  ++S + +  DS +
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            + ++  L +  K+  A+     M   G +    ++N L+ GLC   ++D+AI       
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI------- 464

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                                         LA+M+   C  DV +Y I+I ++    +  
Sbjct: 465 ----------------------------TFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGS----QLHLVSSGINKLVSDSEVLDSSMY 655
                F  MVK G++PD     SLL GLA        L L+ + + K        D  M+
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK-------PDFVMH 549

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSS 713
            ++++GL K G    A  +++ M   G+  DA T+  +V     +G+   +R+   D+S 
Sbjct: 550 KMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASE 609

Query: 714 FPDSVSDILAE 724
              SV  +  E
Sbjct: 610 THTSVERLSME 620


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 255/573 (44%), Gaps = 45/573 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA--IVEEKRGFADFVFVYKEM 193
           S+V   V   R+  A+ +   + + G K+SV +   ++    +  E R   D   +++E 
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALD---IFEET 308

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G+VP   T   L+    E    E A +  R+M   G  P++  F +VIKGL+ +   
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D+VS+  EM D GI    + Y  +I  LC+  K+ EA+ L++ M    + P  +TY  L
Sbjct: 369 KDAVSLFKEMADSGIPDAFT-YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           + C C N  +D+A  +  +M   G TP    +  +++G      FD+             
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK------------- 474

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGR 432
                             A  +L +M    ++  D ++N  I  LC    + +  E+L R
Sbjct: 475 ------------------AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKR 516

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
                 VP   TY++ + G  K      A  V++Q+ A+ +  + ++Y+  ++G C+   
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
              A+++   +   G     +++N LIYG C    +  A+++  L    G     S Y  
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            + G   L+  ++ L    +M+ EG  LD   Y  LI   S+   +      ++ MV  G
Sbjct: 637 FITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696

Query: 613 LVPDRETMLSLLHGL---ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            +PD  T  +L HGL    D      +   +N+L     VL   MYN+LING  + G   
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL---MYNMLINGYLRNGKLQ 753

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVG-SSVGEE 701
           +A  L D ML +  +PD TT+ +LVG  S+G +
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYDILVGMKSLGSD 786



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 244/576 (42%), Gaps = 72/576 (12%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G  L   +F+VV+ A  +E   + D V ++ EM  + I P+    +  +  L +  
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGM-YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               AL   R+M   G  P   TF  V+  L+   R+++++ I  E+   G ++ +   T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++   C + ++ +A+ +F+      L+P ++TY  LI    E    + A ++   M   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           GL P+ + F  +++GL     + ++V+                               + 
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVS-------------------------------LF 375

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           ++MAD  I D  ++NI I WLC+  +IR+A  L  +M  + V P   TY + +L  C   
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNG 435

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ++A++++ ++  +    + ++Y+ L++G        +A  +   M +NG S +  ++N
Sbjct: 436 CMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYN 495

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI GLCV+ +V +   +     + G   T  TY  I+ G +K         V  QM  +
Sbjct: 496 TLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAK 555

Query: 577 G--------------------CAL---------------DVEAYCILIQSMSEQNKLKDC 601
           G                    C L               D+ AY  LI    ++  +   
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHA 615

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                +M+K GL+P+     S + G  +   +        K++ +   LD++ Y  LI+G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDG 675

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGL 692
             K+G  + A  L   M+ KG +PD     A THGL
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 219/508 (43%), Gaps = 51/508 (10%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +G  P++++   ++     ++   D++++L EM   G  L+   +  ++    +E  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND---ILEDMIVIGLTPTDDV 344
            ++A+RLF  M A ++ PD+      I  LC   +L DAN    +L  M   G  P D  
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLC---KLRDANRALLVLRKMQDAGFVPWDFT 249

Query: 345 FVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
           F  +V  L + G+ +E+++  ++      K   V +    L+   C   +   A  I E+
Sbjct: 250 FNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA--TTLMHGYCLQREVRKALDIFEE 307

Query: 399 MADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                +   D ++ + IR   E     KAYEL  +M    ++P    ++  + G      
Sbjct: 308 TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL 367

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           ++DA+ +F+++ A S + D+ +Y+ L+  LCQ  KI EA+ ++  M++ G      +++ 
Sbjct: 368 WKDAVSLFKEM-ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L+   CV   +D+A++L +     G +    TYT +M G +          +LA+M   G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 578 CALDVEAYCILIQSMS---------------EQNKLKDCALFFNVM----VKAGLV---- 614
            + +   Y  LI  +                E       A+ +N +    +KAG++    
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 615 ------------PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
                       P+  T  S + G    S   L    +N +       D + YN LI G 
Sbjct: 547 AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGF 606

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +EG  S A  +L LML  G +P+ + +
Sbjct: 607 CQEGNMSHALQVLVLMLKDGLLPNISVY 634


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 250/535 (46%), Gaps = 18/535 (3%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAG----IVPNVDTLNYLLEVLFETNRIESALDQF 225
           N +L A V  +R F+D    +  +        I PN+ T N +L  L     ++ A+  F
Sbjct: 123 NALLDAFVRARR-FSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLF 181

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             + ++   P+  T+  ++ GL    R+D ++ +L EM   G+Q ++  Y  ++    + 
Sbjct: 182 DSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKA 241

Query: 286 NKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            + E+ +R++ K+++     P+  TY  +++ LC+  R  +  ++ E M+   L P    
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVIT 301

Query: 345 FVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMA 400
           +  ++ GLC  G  D +     +  K G V   + +N+L++  C AG+   A    +   
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG 361

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYE 459
              + +  ++NI I+ L ++  + +A EL   +    + +PD  T+   + G C+     
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A  +F +       LD  SYS ++ GLC V ++ +AV+V+  M K+GC  +S  +N LI
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C + +   A+R+ S    +G S T  TY  ++ GL K ++ ++   V  +M+  G  
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHL 635
            D+  Y  LI+ +    K+ D    +  ++  GL  D      L+HGL    +    LH+
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            S    K      ++    YN L++GL++ G   +A+ L   +   G  PD  ++
Sbjct: 602 FSDMKEKKNCPPNLV---TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 270/574 (47%), Gaps = 20/574 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV----DVFNVVLGAIVEEKRGFAD-FVFVY 190
           +L+ +FV   R + A     +++ G F   +      +N+VL ++    RG  D  V ++
Sbjct: 124 ALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCA--RGDLDRAVTLF 181

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
             + +  + P+  T + L+  L + +R++ ALD    M + G  P+   +  ++ G    
Sbjct: 182 DSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKA 241

Query: 251 SRVDDSVSILGEMF-DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  + +  ++  D G +  L+ Y  ++  LC+  + +E   +++ M A +L PD +T
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVIT 301

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  LI+ LC +  +D A  +  ++I  GL     ++  +V+G C+ G+  E+  F  D  
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-DSA 360

Query: 370 GYVT----SPHNALLECCCNAGKFFLAKCI-LEKMADRKIA---DCDSWNIPIRWLCENE 421
           G+        +N +++   ++G   + + I L  + ++ +A   D  ++   I  LC+N 
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSG--MVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNG 418

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
              KA+ +     VS    D  +YS+ + G C +    DA++V+ ++       +S  Y+
Sbjct: 419 FANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ G CQV + ++AV ++  M+ NGCS +  ++N LI GLC   K  +A  +      +
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN 538

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G +   +TY  ++ GL   ++  D L +  Q+L +G  +DV  + ILI  +    K+ + 
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598

Query: 602 ALFFNVMV-KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              F+ M  K    P+  T  +L+ GL +   +   ++    +  D    D   YN  I 
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL       +   LLD +L +G +P   T  +LV
Sbjct: 659 GLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 217/518 (41%), Gaps = 73/518 (14%)

Query: 219 ESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----FDLGIQLELS 273
           ++ALD FR +    GC P  R+   ++   +   R  D+ +    +    F   I   L 
Sbjct: 100 DAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 159

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  ++  LC    L+ A+ LF  +R   + PD +TY  L+  L +  RLD A D+L++M
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEM 219

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
              G+ P      D+V                   C      +NALL  C  AG+F    
Sbjct: 220 PRSGVQP------DVV-------------------C------YNALLGGCFKAGEFEKVM 248

Query: 394 CILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            + +K+     A  +  ++N+ +  LC+    ++  E+  RMV +++ PD  TY   + G
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA--------------- 496
            C+  + + A RV+ ++    LV+D+  Y+ LV+G CQ  ++ EA               
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNL 368

Query: 497 -------------------VEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
                              +E++  + K+  C   + +F  LI+GLC     +KA  +  
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
            A  SG      +Y+ ++ GL  + R  D + V  +M  +GC  +   Y  LI    +  
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +  D    ++ M   G  P   T  +L+ GL    +    SS   ++V +    D + Y 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            LI GL+ +     A  +   +L KG   D   H +L+
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILI 586



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/501 (22%), Positives = 212/501 (42%), Gaps = 78/501 (15%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+       R++ A+ +L  M   G +  V  +N +LG   +    F   + V+ ++VK
Sbjct: 198 TLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGE-FEKVMRVWDKLVK 256

Query: 196 -AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G  PN+ T N +L+ L +  R +   + + RM      P+  T+ I+I GL  +  VD
Sbjct: 257 DPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVD 316

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF--------KMMRALDLM-- 304
            +  +  E+   G+ ++ + Y  ++   C+  +++EA + +        + +R  ++M  
Sbjct: 317 GAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIK 376

Query: 305 -------------------------PDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
                                    PD +T+  LI+ LC+N   + A  I E+  V G  
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCI 395
                +  ++ GLC VG+  ++V   E    D C   +  +NAL+   C   +   A  I
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI 496

Query: 396 LEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
             KMAD   +    ++N  I  LC+ E+ ++A  +   MV +   PD  TY + + G   
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM----------- 503
               +DAL +++Q+  + L +D + ++ L+ GLC   K+ EA+ VF  M           
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616

Query: 504 -------------------------SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
                                    +++G      S+N  I GLC   ++ + I+L    
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEV 676

Query: 539 YSSGTSYTTSTYTKIMLGLVK 559
            S G   T  T+  ++  ++K
Sbjct: 677 LSRGIIPTVITWNILVRAVIK 697



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 132/291 (45%), Gaps = 49/291 (16%)

Query: 115 MEGLCQN-MVKERYPNVREALISL----VFSF-------VNHYRVNGAMRVLVNMNSGGF 162
           + GLCQN    + +    EA +S     VFS+        N  R+  A++V   M+  G 
Sbjct: 411 IHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGC 470

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K +  ++N ++    +  R  +D V +Y +M   G  P V T N L++ L +  + + A 
Sbjct: 471 KPNSHIYNALISGFCQVYRT-SDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              R M + G  P+  T+  +I+GL ++ ++DD++SI  ++   G+++++  +  +I  L
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589

Query: 283 CRENKLEEAIRLFKMMRA--------------LD----------------------LMPD 306
           C   K++EA+ +F  M+               +D                      L PD
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            ++Y   I  LC   R+ +   +L++++  G+ PT   +  +VR + + G 
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGP 700


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 230/498 (46%), Gaps = 34/498 (6%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A+ +L  M   G++ S+   + +L      KR  +D V +  +MV+ 
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEM 184

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+  T   L+  LF  N+   A+    RM ++GC PN  T+ +V+ GL      D +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +++L +M    I+ ++  +  II  LC+   +++A+ LFK M    + P+ +TY  LI+C
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   R  DA+ +L DMI   + P    F                               
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTF------------------------------- 333

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NAL++     GKF  A+ + + M  R I  D  ++N  +   C ++ + KA ++   MV 
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD  TY+  + G CK    ED   +FR++S + LV D+++Y+ L++GL        
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A +VF  M  +G      +++IL+ GLC   K++KA+ +      S        YT ++ 
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G+ K  +  D   +   + ++G   +V  Y  +I  +  +  L++       M + G +P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573

Query: 616 DRETMLSLLHG-LADGSQ 632
           +  T  +L+   L DG +
Sbjct: 574 NSGTYNTLIRAHLRDGDK 591



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 252/535 (47%), Gaps = 6/535 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L AI + K+ F   + + ++M +  IV  + T N L+      ++I  AL  
Sbjct: 84  SIVEFNKLLSAIAKMKK-FDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  P+  T   ++ G     R+ D+V+++ +M ++G + +   +T +I  L  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA+ L   M      P+ +TY  ++N LC+    D A ++L  M    +     +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           F  I+  LC+    D+++N  ++       P    +++L+ C C+ G++  A  +L  M 
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           ++KI  +  ++N  I    +  +  +A +L   M+  S+ PD  TY++ V G C     +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A ++F  + ++    D ++Y+ L++G C+ +++ +  E+F  MS  G    + ++  LI
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GL      D A ++     S G      TY+ ++ GL    + +  L V   M      
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           LD+  Y  +I+ M +  K+ D    F  +   G+ P+  T  +++ GL     L    + 
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + K+  D  + +S  YN LI    ++G  + ++ L+  M    +V DA+T GL+ 
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 617



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 201/483 (41%), Gaps = 5/483 (1%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+  F  M K    P+   F  ++  +    + D  +S+  +M  L I   L  Y 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR +++  A+ L   M  L   P  +T   L+N  C   R+ DA  +++ M+ +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P    F  ++ GL    K  E+V  ++        P    +  ++   C  G   LA
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L KM   KI AD   +N  I  LC+   +  A  L   M    + P+  TYS+ +  
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C    + DA ++   +  + +  + ++++ L++   +  K  EA +++  M K      
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++N L+ G C+  ++DKA ++     S        TY  ++ G  K +R +D   +  
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   G   D   Y  LIQ +       +    F  MV  G+ PD  T   LL GL +  
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +L       + +      LD  +Y  +I G+ K G       L   +  KG  P+  T+ 
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544

Query: 692 LLV 694
            ++
Sbjct: 545 TMI 547



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 160/395 (40%), Gaps = 15/395 (3%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD------ESVN 363
           Y E++     +++LDDA  +   M+     P+   F  ++  + ++ KFD      E + 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA----DRKIADCDSWNIPIRWLCE 419
            LE   G  T  +N L+ C C   +  LA  +L KM     +  I    S    +   C 
Sbjct: 113 RLEIVHGLYT--YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL---LNGYCH 167

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            + I  A  L+ +MV     PD  T++  + G        +A+ +  ++  +    + ++
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y  +V GLC+      A+ +   M           FN +I  LC  R VD A+ L     
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + G      TY+ ++  L    R  D   +L+ M+ +    ++  +  LI +  ++ K  
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    ++ M+K  + PD  T  SL++G     +L         +VS     D   YN LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G  K       + L   M  +G V D  T+  L+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442



 Score = 42.4 bits (98), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 36/173 (20%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK------------------ 230
           V+K+MV  G+ P++ T + LL+ L    ++E AL+ F  M K                  
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516

Query: 231 -----------------KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
                            KG  PN  T+  +I GL +   + ++ ++L +M + G      
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            Y  +I    R+     +  L + MR+   + D  T   + N L +  RLD +
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG-RLDKS 628


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 244/527 (46%), Gaps = 33/527 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L +I + K  ++  + +  +M   G+ PNV TLN L+      NR+  A     ++
Sbjct: 59  FAKLLTSIAKMKH-YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI 117

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P+  TF  +I+GL    ++ +++ +  +M D G Q  +  Y  +I  LC+    
Sbjct: 118 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNT 177

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  PD + Y  +I+ LC++ ++ +A ++   M+  G++P  D+F   
Sbjct: 178 SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP--DIFT-- 233

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                      + +L+   CN  ++     +L +M + KI  D 
Sbjct: 234 ---------------------------YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDV 266

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
             ++  +  LC+  ++ +A+E++  M+   V PD  TY+  + G C     ++A++VF  
Sbjct: 267 VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 326

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +    D ISY+ L+ G C++ KI +A+ +F  M +      + ++N L++GLC + +
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  AI L     + G      TY+ ++  L K    ++ + +L  +       D++ Y I
Sbjct: 387 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNI 446

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I  M    +L+     F+ +   GL P   T   ++HGL     L+  +    ++  + 
Sbjct: 447 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 506

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              D   YN +  G  +   T +A  LL+ ML +G+  D +T  LLV
Sbjct: 507 CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 224/478 (46%), Gaps = 19/478 (3%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADF 186
           PNV    I L+ SF +  RV  A  VL  +   G +     F  ++ G  VE K G A  
Sbjct: 89  PNVYTLNI-LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA-- 145

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M+  G  PNV T   L+  L +     +A+   R M +  C P+   +  +I  
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDS 205

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  + +V ++ ++  +M   GI  ++  YT ++  LC   + +    L   M    ++PD
Sbjct: 206 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 265

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---- 362
            + +  +++ LC+  ++ +A++I++ MI  G+ P    +  ++ G C   + DE+V    
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325

Query: 363 -----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRW 416
                 F  D   Y T     L+   C   K   A  + E+M  ++ I D  ++N  +  
Sbjct: 326 MMVRKGFAPDVISYTT-----LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC    ++ A  L   MV    +PD  TYS  +   CK C+ E+A+ + + + A +L  D
Sbjct: 381 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPD 440

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
              Y+ +++G+C+  ++  A ++F  +S  G   S  ++NI+I+GLC    +++A +L  
Sbjct: 441 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 500

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
               +  S    TY  I  G ++       + +L +ML  G + DV    +L++ +S+
Sbjct: 501 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD 558



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 209/480 (43%), Gaps = 5/480 (1%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F R+      P+   F  ++  +         +S+  +M   G+   +   
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C  N++  A  +   +  L   PD  T+  LI  LC   ++ +A  + + MI 
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG    ++  L    +  C      + ++++  C   +   
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  +M  + I+ D  ++   +  LC   E +    LL +MV S ++PD   +S  V 
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 274

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  +   +  + +  D ++Y+ L++G C   ++ EAV+VF  M + G + 
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 334

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S+  LI G C + K+DKA+ L            T TY  +M GL  + R +D + + 
Sbjct: 335 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALF 394

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D+  Y IL+ S+ +   L++       +  + L PD +    ++ G+   
Sbjct: 395 HEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA 454

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S         YNI+I+GL K GL ++A+ L   M G    PD  T+
Sbjct: 455 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTY 514



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 197/447 (44%), Gaps = 5/447 (1%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD++S    +  +     +  +  ++  + +       + L   M +  + P+  T   
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN  C   R+  A  +L  ++ +G  P    F  ++RGLC  GK  E+++  +      
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    +  L+   C  G    A  +L  M       D   +   I  LC++ ++ +A+
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L  +MV   + PD  TY++ V   C LC ++    +  Q+    ++ D + +S +V+ L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+TEA E+   M + G      ++  L+ G C+  ++D+A+++  +    G +   
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +YT ++ G  K+ +    + +  +M  +    D + Y  L+  +    +L+D    F+ 
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV  G +PD  T   LL  L     L    + +  + + +   D  +YNI+I+G+ + G 
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
              A  L   +  KG  P   T+ +++
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMI 483



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 165/379 (43%), Gaps = 5/379 (1%)

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NA 378
           LDDA      ++ +   P+   F  ++  + ++  +   ++       +   P+    N 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 379 LLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C+  +   A  +L K+       D  ++   IR LC   +I +A  L  +M+   
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P+  TY   + G CK+ N   A+R+ R +   +   D + Y+ +++ LC+  ++TEA 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +F  M   G S    ++  L++ LC + +      L +   +S        ++ ++  L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K  +  +   ++  M+  G   DV  Y  L+     Q+++ +    F++MV+ G  PD 
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
            +  +L++G     ++        ++     + D+  YN L++GL   G    A  L   
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 678 MLGKGWVPDATTHGLLVGS 696
           M+ +G +PD  T+ +L+ S
Sbjct: 397 MVARGQMPDLVTYSILLDS 415


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 262/570 (45%), Gaps = 10/570 (1%)

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            A+ +L  M   G+     +F  V+G  +++ +   + V V  EM+  G   NV     L
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGK-MLEAVKVKGEMLSCGKPMNVVVATTL 335

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++   +   ++SAL+ F +M++ G CPN+ T+ ++I+    N  +D +  I  +M +  I
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDI 395

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
              +     +I    +    EEA +LF    A  +  +  TY  L++ LC+  ++ +A  
Sbjct: 396 SPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACS 454

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCC 384
           I E M+  G+ P+   + +++ G C+ G  D +    V  LE         ++ L++   
Sbjct: 455 IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514

Query: 385 NAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G    A  + ++M    IA  D + NI I  LC+     ++ + L ++V    +P C 
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCM 574

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY+  + G  K  +   AL V+ ++    +  +  +Y+ L+ G C+   +  A++V   M
Sbjct: 575 TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEM 634

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
              G  L  + +  LI G C    +  A +L S     G S     Y+ ++ G  KLQ  
Sbjct: 635 KNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNM 694

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           +  L +  +M+ EG   D++ Y  LI  + ++ KL   +  +  M+  G++PD  T   L
Sbjct: 695 EAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVL 754

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +HGL +  QL      +  +          +YN LI G +KEG   +A  L + ML KG 
Sbjct: 755 IHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814

Query: 684 VPDATTHGLLVGSSVGEEIDSRRFAFDSSS 713
           VPD TT+ +LV   V    D   F+  SS+
Sbjct: 815 VPDDTTYDILVNGKVK---DGNLFSGASSA 841



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 163/765 (21%), Positives = 310/765 (40%), Gaps = 92/765 (12%)

Query: 7   SLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHN---LSP 63
           S +I +  ++ +     +SS      IP+S        H  T++  K      +      
Sbjct: 6   SSSIPHFTLRSIKSPKTLSSQPELPNIPISETPLSQNPHPNTNFPGKSAPTSQDSFLTQT 65

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            ++  +L++ ND  SAL  F W S ++    + D  C +   L +     E  G  +N++
Sbjct: 66  QYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVL---LHILTKSTETCGKARNLL 122

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
                +    + S+V +           R++ +     F+    VFN +L + V+ KR  
Sbjct: 123 NRFASDDWGPVPSVVVA-----------RLIESSRRLDFESDSRVFNYLLNSYVKTKR-I 170

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            D V  +  +++  IVP +  +N  L  L + N I  A D + +M  KG   +  T  ++
Sbjct: 171 NDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVM 230

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I+  +   +++++     E  + G++L+   Y+ +I  +C++     A+ L + MR    
Sbjct: 231 IRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGW 290

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +P E+ +  +I    +  ++ +A  +  +M+  G      V   +++G C+ G  D ++ 
Sbjct: 291 VPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALE 350

Query: 364 FLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKI--------------- 404
             +        P+N     ++E CC  G    A  I  +M ++ I               
Sbjct: 351 LFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYL 410

Query: 405 --------------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                               A+  ++N  + WLC+  ++ +A  +  +MV   V P   +
Sbjct: 411 KARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVS 470

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  +LG C+  + + A  VF ++  + L  + I+YS L++G  +      A  ++  M 
Sbjct: 471 YNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMR 530

Query: 505 KNGCSLSSSSFNILIYGLC-VMRKVDKAIRLRSLAYSS---------------------- 541
               + S  + NI+I GLC   R  +   RL+ L                          
Sbjct: 531 GENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVN 590

Query: 542 ------------GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
                       G S    TYT ++ G  K       L V+ +M  +G  LDV  YC LI
Sbjct: 591 SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALI 650

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
                +  + + +   + + + GL P++    S++ G      +        +++++   
Sbjct: 651 DGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIP 710

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            D  +Y  LI+GL KEG    AS L   ML KG +PD  T+ +L+
Sbjct: 711 CDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLI 755



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 102/512 (19%), Positives = 213/512 (41%), Gaps = 22/512 (4%)

Query: 195 KAGIVPNVDTLNYLLEVLFE-TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           K G++ +VD L  LL +L + T     A +   R       P      +V+  LI +SR 
Sbjct: 91  KRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGP---VPSVVVARLIESSR- 146

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
                       L  + +   +  ++    +  ++ +A+  F  +   D++P        
Sbjct: 147 -----------RLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIF 195

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYV 372
           ++ L +N  + +A D+   M   G+         ++R     GK +E+   F E K   V
Sbjct: 196 LSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGV 255

Query: 373 ---TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE-EIRKAYE 428
                 ++ ++E  C       A  +L +M D+     +     +  +C  + ++ +A +
Sbjct: 256 ELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVK 315

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           + G M+      +    +  + G CK  + + AL +F +++   +  ++++Y+ ++E  C
Sbjct: 316 VKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCC 375

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   + +A E++  M     S +  + N LI G    R  ++A +L   A + G +    
Sbjct: 376 KNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVF 434

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  ++  L K  +  +   +  +M+ +G    V +Y  +I    +Q  +      F  M
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           ++ GL P+  T   L+ G              +++  ++        NI+INGL K G T
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           S++   L  ++ +G++P   T+  ++   V E
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 3/270 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYR 146
           +Q+ F  T  TY  +I      G+V     +   M K    PNV     +L+  F     
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVF-TYTNLINGFCKSNN 623

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++ A++V+  M + G +L V V+  ++      K    +   +  E+ + G+ PN    +
Sbjct: 624 MDLALKVMDEMKNKGIELDVTVYCALIDGFCR-KGDMVNASQLLSELQEVGLSPNKVVYS 682

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            ++    +   +E+AL   +RM  +G   + + +  +I GL+   ++  +  +  EM   
Sbjct: 683 SMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           GI  +L  Y+ +I  LC + +LE A ++ + M    + P    Y  LI    +   L +A
Sbjct: 743 GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEA 802

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
             +  +M+  GL P D  +  +V G  + G
Sbjct: 803 FRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 242/541 (44%), Gaps = 41/541 (7%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P     N +++ L  T   + A   + RM   G  P++RT  + IK      R   +
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + +L  + + G  ++   Y  ++  L       +A  LF  M   D+ PD  T+  +++ 
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS-- 374
           LC+   + ++  +L  ++  G++         +RGLCE G+ +E+V  +E    Y+    
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDV 184

Query: 375 -PHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N L+   C   K   A   L +M ++  I D  ++N  I   C+ + +++A ELL  
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
            +    VPD  TY + + G C   + E AL +F +  A+ L  D + Y+ LV+GLC+   
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR-------------------------- 526
           I  A++V   M ++GC     ++NI+I GLC M                           
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 527 ---------KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
                    K+D A++L    +  G +    TY  ++ GL K  +AK++     +M+++G
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           C  +   Y ILI++  + N+L++ +     M + GLVPD  +  +L+HG      L    
Sbjct: 425 CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAY 484

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ-ASYLLDLMLGKGWVPDATTHGLLVGS 696
               KL        +  +NILI G +   L  Q A  +   M+ KG+ PD  T+ +LV  
Sbjct: 485 LLFQKLDEKGYSATADTFNILI-GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDG 543

Query: 697 S 697
           S
Sbjct: 544 S 544



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/564 (22%), Positives = 262/564 (46%), Gaps = 8/564 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+ R   +  + SF    R + A+R+L ++   G  +    +  V+  +     G+ D  
Sbjct: 43  PDARTHTVR-IKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGY-DAR 100

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            ++ EM++  + P+V T N +L  L +   I  +     ++ K+G   N  T  I I+GL
Sbjct: 101 HLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGL 160

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R++++V+++ E  D  I  ++  Y  ++  LC+++K++EA +  + M     +PD+
Sbjct: 161 CEGGRLEEAVALV-ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDD 219

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            TY  +I+  C+   L +A ++L+D I  G  P    +  ++ GLC  G  + ++    +
Sbjct: 220 FTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE 279

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEE 422
                  P    +N+L++  C  G    A  ++ +M  D    D  ++NI I  LC+   
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN 339

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I  A  ++   +V   +PD  T++  + G CK    + AL++  ++    +  D+I+Y+ 
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS 399

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++ GLC+  K  E  E F  M   GC  ++ ++NILI   C + ++++A  +       G
Sbjct: 400 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
               T ++  ++ G  +        ++  ++  +G +   + + ILI + S +  ++   
Sbjct: 460 LVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 519

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  M+  G  PD  T   L+ G    + +      + ++VS   V   + +  ++N L
Sbjct: 520 KIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSL 579

Query: 663 WKEGLTSQASYLLDLMLGKGWVPD 686
                 S+A  ++ +M+  G VP+
Sbjct: 580 AMNHRVSEAVAIIHIMVRMGVVPE 603



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 124/548 (22%), Positives = 228/548 (41%), Gaps = 97/548 (17%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E + A I P+V T N L+  L + ++++ A    RRM  +GC P+  T+  +I G     
Sbjct: 174 ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD 233

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            + ++  +L +    G   +   Y  +I  LC E  +E A+ LF   +A DL PD + Y 
Sbjct: 234 MLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYN 293

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC-- 369
            L+  LC    +  A  ++ +M+  G  P    +  ++ GLC++G   ++   + D    
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVK 353

Query: 370 GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
           GY+      N +++  C   K   A  ++E+M    IA D  ++N  +  LC+  + ++ 
Sbjct: 354 GYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEV 413

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            E    M++    P+  TY+  +   CK+   E+A  V  ++S   LV D+IS++ L+ G
Sbjct: 414 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHG 473

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY-------------------------- 520
            C+   +  A  +F  + + G S ++ +FNILI                           
Sbjct: 474 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533

Query: 521 ---------GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
                    G C    VD+A                                    V LA
Sbjct: 534 LYTYRVLVDGSCKAANVDRA-----------------------------------YVHLA 558

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD-RETMLSLLHGLADG 630
           +M+ +G    +  +  ++ S++  +++ +     ++MV+ G+VP+  +T+LS      D 
Sbjct: 559 EMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILS-----TDK 613

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV---PD- 686
            ++      + +L+    +     Y +L  G+    LT +A         + W    PD 
Sbjct: 614 KEIAAPKILVEELMKKGHI-SYPTYEVLHEGVRDNKLTRKA---------RKWRLSDPDC 663

Query: 687 --ATTHGL 692
              TTHG+
Sbjct: 664 MNTTTHGI 671



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 36/276 (13%)

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+++  RM+ + V PD  T++  +   C       ALR+ R +  +   +  ++Y  +V
Sbjct: 28  QAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVV 87

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GL       +A  +F  M +       ++FN +++ LC  +K D           SG  
Sbjct: 88  RGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC--QKGD--------IMESGA- 136

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                                   +LA++L  G +++     I I+ + E  +L++    
Sbjct: 137 ------------------------LLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL 172

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              M  A + PD  T  +L+ GL   S++   +  + ++++   + D   YN +I+G  K
Sbjct: 173 VESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK 231

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
             +  +A+ LL   + KG+VPD  T+  L+     E
Sbjct: 232 RDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAE 267



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 1/185 (0%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           I K  +  A TY  +I        +EE  G+   M ++       +  +L+  F  +  +
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           +GA  +   ++  G+  + D FN+++GA    K        ++ EM+  G  P++ T   
Sbjct: 481 DGAYLLFQKLDEKGYSATADTFNILIGA-YSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++   +   ++ A      M  KG  P+  TF  V+  L  N RV ++V+I+  M  +G
Sbjct: 540 LVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599

Query: 268 IQLEL 272
           +  E+
Sbjct: 600 VVPEV 604


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/542 (23%), Positives = 254/542 (46%), Gaps = 11/542 (2%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+++   V N +L  + + KR       + ++M + G    V + N LL+ L +  R E 
Sbjct: 114 GWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEE 173

Query: 221 ALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           A +    M       C P+  ++ IVI G     +VD + S+  EM   G+  ++  Y  
Sbjct: 174 ARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNT 230

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II  LC+  +++ A  +F+ M    + P+ +TY  +I+ LC+   +D A  + + M+  G
Sbjct: 231 IIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           + P++  +  I+ GLC+    D +    +        P    +N +++  C A     A+
Sbjct: 291 VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAE 350

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + ++M D+ +  D  ++ I I  LC+ + + +A  +  +M+   V P+  TY+  + G 
Sbjct: 351 GVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY 410

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                +E+ ++  +++SA  L  D  +Y  L++ LC+  K  EA  +F  M + G   S 
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           + + I+++G      + +   L +L  ++G S     +  ++    K     +++ +  +
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M  +G + +V  Y  LI ++ +  ++ D  L FN M+  G+ P+     SL++GL    +
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
              V     ++++     D   +N ++  L KEG   +A  L+D M+  G  PD  ++  
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650

Query: 693 LV 694
           L+
Sbjct: 651 LI 652



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 148/646 (22%), Positives = 287/646 (44%), Gaps = 13/646 (2%)

Query: 36  SSETDMIKS--HQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQ 93
           + E DM +    +  D   K  ++ +N   D L +       +  A  +F+ + I +  +
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK----AQAVDRAEGVFQQM-IDRGVK 327

Query: 94  HTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV 153
               TY  +I  L  A  +++ EG+ Q M+ +           ++        V+ A  V
Sbjct: 328 PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
              M   G K +   +N ++   +   + + + V   KEM    + P+V T   LL+ L 
Sbjct: 388 FQQMIDKGVKPNNGTYNCLIHGYLSTGQ-WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLC 446

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +  +   A   F  M +KG  P+   + I++ G      + +   +L  M   GI     
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  +I    +   ++E + +F  M+   L P+ +TY  LI+ LC+  R+DDA      M
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
           I  G+TP + VF  +V GLC V K+++      +       P     N +L   C  G+ 
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A+ +++ M    +  D  S+N  I   C    + +A +LL  MV + + P+  +Y+  
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G CK    ++A  +FR++  + +     +Y+ ++ GL +  + +EA E++  M K+  
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRK 746

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             S  +++I++ G C     D+A ++     S        T+  ++ GL K  R +D + 
Sbjct: 747 LWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMD 806

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           + A +   G    V  Y ++ +++ E+  L++    F+VM K+G  P+   + +L+  L 
Sbjct: 807 LFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLL 866

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           D  ++    + ++KL   +  L++S  ++LI+   +E     A  L
Sbjct: 867 DRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSL 912



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 190/413 (46%), Gaps = 14/413 (3%)

Query: 293 RLFKMMR--ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           R  +M+R  +  + PD  TY  +I C C   RL+        ++  G    D V   +++
Sbjct: 68  RFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLK 127

Query: 351 GLCEVGKFDESVNFL-----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
           GLC+  +  E+++ L     E  C      +N LL+  C+  +   A+ +L  M D + +
Sbjct: 128 GLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDS 187

Query: 406 DCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            C     S+NI I       ++ KAY L   M VS   PD  TY+  + G CK    + A
Sbjct: 188 SCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS---PDVVTYNTIIDGLCKAQEVDRA 244

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             VF+Q+  + +  ++++Y+ +++GLC+ +++  A  VF  M   G   S+ ++N +I G
Sbjct: 245 EDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDG 304

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           LC  + VD+A  +       G      TY  I+ GL K Q       V  QM+ +G   D
Sbjct: 305 LCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD 364

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
              Y I+I  + +   +      F  M+  G+ P+  T   L+HG     Q   V   I 
Sbjct: 365 NLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIK 424

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++ +     D   Y +L++ L K G  ++A  L D M+ KG  P  T +G+++
Sbjct: 425 EMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/526 (22%), Positives = 240/526 (45%), Gaps = 14/526 (2%)

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES---ALDQFRRMHK---KGCCP 235
           G  D + ++ E++      +V  LN LL V+       S   A+ +F RM +       P
Sbjct: 23  GLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAP 82

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR-L 294
           +  T+ IVI       R++   +  G +   G +++      ++  LC   ++ EA+  L
Sbjct: 83  DCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVL 142

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG----LTPTDDVFVDIVR 350
            + M  +      ++Y  L+  LC+  R ++A ++L  M+V G     +P    +  ++ 
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLH-MMVDGQDSSCSPDVVSYNIVIN 201

Query: 351 GLCEVGKFDESVN-FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
           G    G+ D++ + FLE         +N +++  C A +   A+ + ++M ++ +   + 
Sbjct: 202 GFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC+ +E+  A  +  +MV   V P   TY+  + G CK    + A  VF+Q+
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + +  D ++Y+ +++GLC+ + I +A  VF  M   G    + ++ I+I GLC  + V
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D+A  +       G      TY  ++ G +   + ++++  + +M       DV  Y +L
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           +  + +  K  +    F+ M++ G+ P       +LHG      L  +   +N +V++  
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +  ++N +I    K  +  +  ++   M  +G  P+  T+G L+
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 161/671 (23%), Positives = 282/671 (42%), Gaps = 76/671 (11%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
           VL +   +S+ +++F W+  QK +QH+  TY   +  L  A   +      Q M +  YP
Sbjct: 11  VLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP 70

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
                   ++        ++ A  +L  +   G KL+V  ++VV+    +  R   D + 
Sbjct: 71  PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR-VDDALE 129

Query: 189 VYKEM-VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           ++K M    G VP+V T N LL+ L    R+  A   F  M K GC PN  ++  ++ GL
Sbjct: 130 IFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R+D++  +  EM +     +L  YT  +  LC+ N++ EA    + M       D 
Sbjct: 190 CKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADA 249

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + +  +I  LC+    ++A +                   ++  LC  G  DE+    E+
Sbjct: 250 VAFSTVIGILCKKGHAEEAQN------------------QMIEHLCRSGMLDEACKTFEE 291

Query: 368 KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADC----DSWNIPIRWLCE 419
                  P     N L+   C + +      + ++M   K   C    +++NI +  LC+
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            +++ +A EL+  M    + PD  TYSA V G CKL   + A  +  ++S + +  DS +
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            + ++  L +  K+  A+     M   G +    ++N L+ GLC   ++D+AI       
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI------- 464

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                                         LA+M+   C  DV +Y I+I ++    +  
Sbjct: 465 ----------------------------TFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGS----QLHLVSSGINKLVSDSEVLDSSMY 655
                F  MVK G++PD     SLL GLA        L L+ + + K        D  M+
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK-------PDFVMH 549

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSS 713
            ++++GL K G    A  +++ M   G+  DA T+  +V     +G+   +R+   D+S 
Sbjct: 550 KMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609

Query: 714 FPDSVSDILAE 724
              SV  +  E
Sbjct: 610 THTSVERLSME 620


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 266/563 (47%), Gaps = 35/563 (6%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           S+ ++NV+L +  +E R   D V ++ K+MV +G+ P   T N L+ +L ++  ++ A +
Sbjct: 20  SIYLYNVLLRSCTKEGR--VDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F +M +KGC PN  +F I+++G          + +LGEM  LG       Y  +I   C
Sbjct: 78  LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI---VIGLT- 339
           +E K ++A +L   MR   L PD +T+   I+ LC + ++ +A+ I  DM    V+GL  
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           P    +  ++ G C+ G  +E+    E     +       +N  L      GK   A+ +
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L++M D  +  +  S+NI +  LC+N  +  A  L+  M  S V+PD  TY+  + G C 
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                +A  V R++       ++ + + L+  L +  +I+EA E+   M++ G  + + +
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-----------------------TYT 551
            NI+I GLC   K+DKAI + +  ++ G++   +                       +Y+
Sbjct: 378 CNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYS 437

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I+ GL K  R  +      +M+ +    D   Y + I S  ++ K+         M K 
Sbjct: 438 TIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKK 497

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G     +T  SL+ GL   +Q+  +   I+++       D S+YN +++ L + G    A
Sbjct: 498 GCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDA 557

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             +LD ML KG  P+ ++  +L+
Sbjct: 558 PSVLDEMLQKGISPNISSFSILI 580



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 134/565 (23%), Positives = 251/565 (44%), Gaps = 27/565 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFV 189
           +L+ SF    + + A +++  M   G    V  FN  +      G ++E  R F D    
Sbjct: 131 TLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI- 189

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
             + V     PN+ T N +L    +   +E A   F +M       N  ++ I + GL+ 
Sbjct: 190 --DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             ++ ++  +L EM D+G++  +  Y  ++  LC+   L +A  L ++M +  ++PD +T
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--D 367
           Y  L++  C   ++ +AN++L +M+  G +P +     ++  L + G+  E+   L+  +
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 368 KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRK 425
           + GYV  T   N +++  CN GK   A  I+  M     A   +       L ++ + RK
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
                        +PD  +YS  + G CK     +A + F ++  ++L  DS  Y   + 
Sbjct: 428 -----------KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIH 476

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  KI+ A  V   M K GC+ +  ++N LI GL    ++ +   L       G S 
Sbjct: 477 SFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSP 536

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
             S Y  ++  L +  R KD   VL +ML +G + ++ ++ ILI++  +          F
Sbjct: 537 DVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIF 596

Query: 606 NVMVKAGLVPDRETMLSL-LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            + +   +   +E + SL  + L  G ++          +  S  + + +Y  LI+ L K
Sbjct: 597 EIALN--VCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCK 654

Query: 665 EGLTSQASYLLDLMLGKGWVPDATT 689
           +     AS +L  ++ KG+  D  +
Sbjct: 655 DEKLDDASGILHKLIDKGYWFDPAS 679



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 132/579 (22%), Positives = 249/579 (43%), Gaps = 50/579 (8%)

Query: 43  KSHQTTDYEAKIQSLRHN-LSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRF---Q 93
           K  +T D E  +  +R + LSPD +     I  L ++  +  A +IF+ + I +     Q
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 94  HTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMR 152
               TY  M+      G +EE   L + M V E   N RE+    +   V   ++  A  
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMN-RESYNIWLLGLVRIGKLLEAQL 256

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           VL  M   G + +V  +N+V+  + +    F D   + + M  +G++P+  T   LL   
Sbjct: 257 VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLF-DARMLMRLMTSSGVLPDTVTYTTLLHGY 315

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
             T ++  A +  R M + GC PN+ T  I++  L    R+ ++  +L +M + G  ++ 
Sbjct: 316 CHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDT 375

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMM-----RAL------------------DLMPDELT 309
                +I  LC   KL++AI +   M      AL                    MPD ++
Sbjct: 376 VTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLIS 435

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-- 367
           Y  +I+ LC+  R+ +A     +M+   L P   ++   +   C+ GK   +   L+D  
Sbjct: 436 YSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDME 495

Query: 368 --KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
              C      +N+L+    +  + F    ++++M +R ++ D   +N  +  LCE   ++
Sbjct: 496 KKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVK 555

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR---QVSAQSLVLDSISYS 481
            A  +L  M+   + P+ +++S  +   CK C++     +F     V      L S++++
Sbjct: 556 DAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFN 615

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           +L+ G     ++ +A E+F         + +  +  LI  LC   K+D A  +       
Sbjct: 616 ELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDK 671

Query: 542 GTSYTTSTYTKIMLGLVKL---QRAKDLLVVLAQMLVEG 577
           G  +  +++  ++ GL K      A +L   + +M  EG
Sbjct: 672 GYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEG 710



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 202/455 (44%), Gaps = 32/455 (7%)

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  ++    +E +++    L K M A  + P+  T+  LI  LC++  LDDA ++ + M
Sbjct: 23  LYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKM 82

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
              G  P +  F  +VRG C  G   + +  L +      SP    +N L+   C  GK 
Sbjct: 83  PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKT 142

Query: 390 FLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV----PDCAT 444
             A+ ++++M  D    D  ++N  I  LC + ++ +A  +   M +  V+    P+  T
Sbjct: 143 DDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIIT 202

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK    E+A  +F ++     +++  SY+  + GL ++ K+ EA  V   M 
Sbjct: 203 YNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMV 262

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G   +  S+NI++ GLC    +  A  L  L  SSG    T TYT ++ G     +  
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVS 322

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           +   VL +M+ +GC+ +     IL+ S+ ++ ++ +       M + G V D  T   ++
Sbjct: 323 EANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVI 382

Query: 625 HGLADGSQLHLVSSGINK------------------LVSDSEVLDSSM-----YNILING 661
            GL +  +L      +N                   LV DS+     M     Y+ +I+G
Sbjct: 383 DGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISG 442

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           L K G   +A      M+GK   PD+  + + + S
Sbjct: 443 LCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 229/557 (41%), Gaps = 77/557 (13%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G  D  F +  E+ +AG+ P V T N L++ L ++ R+E A     RM + G  P+  
Sbjct: 233 KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 292

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TF I+I GL    R  +   +L EM  LG+      Y  +I   CR+    +A+RLF  M
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 352

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT------------------- 339
               + P  +TY  +   LC+   ++ A  ILEDM+ IG+T                   
Sbjct: 353 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 412

Query: 340 -----------------PTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNA 378
                            P D +    +R LC+ GK  E+V      L    G   +  NA
Sbjct: 413 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNA 472

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C       A  +++ M ++ I  D  ++NI IR  C++ ++ +A +L G M    
Sbjct: 473 LIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 532

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             PD  T++  +   C L   E+   +  Q+  + L  D +SY  +++G C+ + I +A 
Sbjct: 533 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK 592

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E    +   G   +   +N LI G      +  AI       S+G   T  TY  +M  +
Sbjct: 593 EYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWM 652

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
                 ++   + +Q       L V  Y I+IQ   +  K+ +   +F  M   G+ P++
Sbjct: 653 CHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNK 712

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
            T  +L++  +                                   K G + +AS L D 
Sbjct: 713 LTYTTLMYAYS-----------------------------------KSGNSEEASKLFDE 737

Query: 678 MLGKGWVPDATTHGLLV 694
           M+G G +PD  T+G L+
Sbjct: 738 MVGSGVIPDNITYGTLI 754



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/494 (21%), Positives = 219/494 (44%), Gaps = 7/494 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGL 247
            ++ +   G  P++ T N  LE L    ++++A + F  M + +    N  ++  +IK L
Sbjct: 172 AFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKAL 231

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               +VD    +L E++  G+Q  +  Y  ++  LC+  ++EEA RL   M    + P  
Sbjct: 232 CKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSV 291

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +T+  LIN L    R  +   +L++M  +G++P + ++ +++   C  G   +++   ++
Sbjct: 292 VTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDE 351

Query: 368 ----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE-NE 421
               K       +N + +  C  G+   A+ ILE M    +   C  +N  + WL +   
Sbjct: 352 MVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTR 411

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +     +   MV   + P+    +A +   CK   +++A+ ++ +   + L ++  + +
Sbjct: 412 RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSN 471

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GLC+ + + EA +V   M   G  L S ++NI+I G C   K+++AI+L       
Sbjct: 472 ALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR 531

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      T+  ++     L + ++   +L QM  EG   D+ +Y  +I    +   ++  
Sbjct: 532 GFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKA 591

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
             +   ++  GL P+     +L+ G      +      +  + S+     +  Y  L+  
Sbjct: 592 KEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYW 651

Query: 662 LWKEGLTSQASYLL 675
           +   GL  +A  + 
Sbjct: 652 MCHAGLVEEAKTIF 665



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 32/406 (7%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A R+L +M S G  +   +FN V+  +++  R     V +  EMV  G+ PN   +   +
Sbjct: 380 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 439

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +  + + A+  + +   KG   N  T   +I GL     + ++  ++  M + GI+
Sbjct: 440 RELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIE 499

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
           L+   Y  +I   C+++K+EEAI+L   M      PD  T+  L++  C   ++++   +
Sbjct: 500 LDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHL 559

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
           L+ M   GL P      DIV                          +  +++  C A   
Sbjct: 560 LDQMKTEGLQP------DIV-------------------------SYGTIIDGHCKAKDI 588

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             AK  L ++ DR +  +   +N  I     N +I  A + +  M  + + P   TY + 
Sbjct: 589 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 648

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   C     E+A  +F Q    ++ L  I Y+ +++G C++ K+ EAV  F  M   G 
Sbjct: 649 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 708

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           S +  ++  L+Y        ++A +L      SG      TY  ++
Sbjct: 709 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/478 (20%), Positives = 193/478 (40%), Gaps = 32/478 (6%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD-LGIQLELSFYTCII 279
           A D FR +  +G  P+ +T    ++ L+   ++D +  +  EM +   + L    YT +I
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC+  K++    +   +    L P  +TY  L++ LC++ R+++A  +   M   G+T
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           P+   F  ++ GL    +F E    L++      SP+  +                    
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVI-------------------- 328

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                     +N  I W C      +A  L   MV+  + P   TY+      CK    E
Sbjct: 329 ----------YNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEME 378

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQ-VEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            A R+   + +  + +    ++ +V  L Q   ++   V +   M   G   +       
Sbjct: 379 RAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTAC 438

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           +  LC   K  +A+ +     + G     +T   ++ GL + +  K+   V+  ML +G 
Sbjct: 439 MRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGI 498

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
            LD   Y I+I+   + +K+++       M + G  PD  T  +LLH   +  ++     
Sbjct: 499 ELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFH 558

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            ++++ ++    D   Y  +I+G  K     +A   L  ++ +G  P+   +  L+G 
Sbjct: 559 LLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 616


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 238/521 (45%), Gaps = 7/521 (1%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           V   M + G K  V  FN ++ A+    +     V + +EM   G+ P+  T   L++  
Sbjct: 76  VYSEMGARGIKPDVVTFNTLMKALCRAHQ-VRTAVLMLEEMSSRGVAPDETTFTTLMQGF 134

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            E   IE+AL    RM + GC     T  ++I G     RV+D++  + +    G + + 
Sbjct: 135 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 194

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y   +  LC+ + +  A+++  +M      PD  TY  ++NCLC+N +L++A  IL  
Sbjct: 195 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 254

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGK 388
           M+  G  P    F  ++  LC   + +E+++          SP     N L+   C  G 
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 314

Query: 389 FFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             LA  + E+M +     D  ++N  I  LC   ++ KA +LL  M  +       TY+ 
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK    E+A  VF Q+  Q +  ++I+++ L++GLC+ +KI +A E+   M   G
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              ++ ++N ++   C    + KA  +     ++G      TY  ++ GL K  R +  L
Sbjct: 435 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 494

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            VL  M ++G     +AY  ++QS+  +N ++D    F  M + G  PD  T   +  GL
Sbjct: 495 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 554

Query: 628 -ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
              G  +      + ++V    + + S + +L  GL   G+
Sbjct: 555 CRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 595



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 247/549 (44%), Gaps = 34/549 (6%)

Query: 151 MRVLV-NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA--GIVPNVDTLNY 207
           M+VLV  M   G ++ + V +  L +  E ++ F D V +    ++   GI  +    N+
Sbjct: 1   MKVLVAEMRREGHQVKLGVVHSFLDS-YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNH 59

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           LL VL E ++++     +  M  +G  P+  TF  ++K L    +V  +V +L EM   G
Sbjct: 60  LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +  + + +T ++     E  +E A+R+   M  +     ++T   LIN  C+  R++DA 
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAG 387
             ++  I  G  P    +   V GLC+            D  G+     + +++      
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQ-----------NDHVGHALKVMDVMVQ------ 222

Query: 388 KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                        +    D  ++NI +  LC+N ++ +A  +L +MV    +PD  T++ 
Sbjct: 223 -------------EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   C     E+AL + RQV+ + +  D  +++ L+  LC+V     A+ +F  M  +G
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C+    ++N LI  LC + K+ KA+ L     S+G   +T TY  I+ GL K  R ++  
Sbjct: 330 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            V  QM ++G + +   +  LI  + +  K+ D     N M+  GL P+  T  S+L   
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                +   +  +  + ++   +D   Y  LINGL K G T  A  +L  M  KG  P  
Sbjct: 450 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 509

Query: 688 TTHGLLVGS 696
             +  ++ S
Sbjct: 510 KAYNPVLQS 518



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 5/246 (2%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D++ Y+ L+  L +  K+     V+  M   G      +FN L+  LC   +V  A+ + 
Sbjct: 53  DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               S G +   +T+T +M G V+    +  L V A+ML  GC+       +LI    + 
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            +++D   +    +  G  PD+ T  + ++GL     +      ++ +V +    D   Y
Sbjct: 173 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 232

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFD 710
           NI++N L K G   +A  +L+ M+ +G +PD TT   L+     G+ + E +D  R    
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292

Query: 711 SSSFPD 716
               PD
Sbjct: 293 KGVSPD 298


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/663 (22%), Positives = 286/663 (43%), Gaps = 37/663 (5%)

Query: 53  KIQSLRHNLSP---DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           K  +L  +LSP   D L   +    +  + L  F + S   +F+ T  +YC +IL L  +
Sbjct: 63  KCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRS 122

Query: 110 GNVEEMEGLCQNMVKERYP-----------NVREALISLVFSFVNHYRVNGAMRVLVNMN 158
             +     L   ++    P            +  AL  L  S V  +    A  +L+++ 
Sbjct: 123 KFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLT-SVVGRFEWTQAFDLLIHVY 181

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           S  F+                  GF+  V V+  + + G  P++ T N+LL  L + N  
Sbjct: 182 STQFR----------------NLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEF 225

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E   + FR M  +G CP+  +F  VI  L    ++++++ +  +M  LGI   +  Y CI
Sbjct: 226 EKCCEVFRVM-SEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCI 284

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+  +L+ A  L + M    + P+  TY  LIN L +    D  N +L++MI  G 
Sbjct: 285 INGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGF 344

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAKC 394
            P   VF +++ G C++G  + ++   +       +P +    +L++  C + +   A+ 
Sbjct: 345 NPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAEN 404

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            LE++    ++   D+    + WLC+      A+     M+  +  P     +  V G C
Sbjct: 405 ALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLC 464

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K   + +A  ++ ++  +      ++ + L+ GLC   K+ EA  +   M + G  +   
Sbjct: 465 KDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRI 524

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI G C   KV+   RLR      G      TY  ++ GL  + +  D + +  + 
Sbjct: 525 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 584

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              G   ++  Y I+++   + N+++D    FN ++   +  +      ++        +
Sbjct: 585 KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 644

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 +  + S   + + + Y+ LI+G+   GL   A +L+D M  +G+VP+   +  L
Sbjct: 645 AAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 704

Query: 694 VGS 696
           +G 
Sbjct: 705 IGG 707



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 205/470 (43%), Gaps = 13/470 (2%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           F +  D YCKM       GN+E    +   M+ +        L SL+  F    ++  A 
Sbjct: 351 FNNLIDGYCKM-------GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 403

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
             L  + S G  +  D    V+  + ++ R  + F F  K M+     P+   L  L+  
Sbjct: 404 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFT-KMMLSRNFRPSDLLLTMLVCG 462

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L +  +   A + + R+ +KG   +  T   +I GL    ++ ++  I+ EM + G+ ++
Sbjct: 463 LCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMD 522

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
              Y  +I   C E K+E   RL + M    + PD  TY  L+  LC   +LDDA  + +
Sbjct: 523 RITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWD 582

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAG 387
           +    GL      +  ++ G C+  + ++  N     L  K    +  +N +++  C  G
Sbjct: 583 EFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNG 642

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  +LE M  + I  +C +++  I  +C    +  A  L+  M     VP+   Y+
Sbjct: 643 NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 702

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           A + G CKL   + A   + ++ + ++  +  +Y+ +++G C++  + +A  +   M ++
Sbjct: 703 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES 762

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           G      ++N+L  G C    +D A ++     + G      TYT ++ G
Sbjct: 763 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 223/501 (44%), Gaps = 43/501 (8%)

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR--IESALD 223
           V VFN +LG++V++K  ++  + + K+M  + I PNV TL  L+  L  +NR  +  A  
Sbjct: 69  VVVFNKLLGSLVKKKH-YSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFS 127

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              +M K G  P   TF  ++ GL + +++ D+V +  E+  +G    L  YT II  LC
Sbjct: 128 ALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLC 187

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +      A++L K M      PD + Y  +I+ LC++ R ++A     +M+  G+ P   
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVV 247

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKM 399
            +  I+ G C +G+ +E+ +  +   G    P+      L++  C  G    A+ + E M
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307

Query: 400 ADRKI------------------------------------ADCDSWNIPIRWLCENEEI 423
            +  +                                         +NI I   C++  +
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A  LL  M    + PD  TYS  + G C+    + A ++F+++ +  L+ DSI+YS L
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++GLC+   + EA  +   M ++        +NILI G+C   K++ A  L S  +  G 
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             +  TYT ++ GL+K   + +   +  +M+V GC  +   Y + IQ         +   
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVR 547

Query: 604 FFNVMVKAGLVPDRETMLSLL 624
               MV  G   D  T   LL
Sbjct: 548 LIEEMVGRGFSADSSTFQMLL 568



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 246/574 (42%), Gaps = 63/574 (10%)

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G  P   +  + +   F T+   +       +   G C N                V
Sbjct: 1   METGTFPKFRSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLH----------SV 50

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D+V+   ++  +     +  +  ++  L ++      I L K M   ++ P+  T   L
Sbjct: 51  ADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTIL 110

Query: 314 INCLCENLR--LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KC 369
           INCLC + R  +  A   L  M  +GL PT   F  ++ GLC   K  ++V   ++  K 
Sbjct: 111 INCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKM 170

Query: 370 GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           G+  S   +  +++  C  G    A  +L+KM ++    D  ++N  I  LC++    +A
Sbjct: 171 GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEA 230

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
                 MV   + P+  TYS+ + G C L    +A  +F+Q+  ++++ ++++++ LV+G
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+   I EA  VF  M++NG    + +++ L+ G C+  ++D+A +L  +    G + +
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y  ++ G  K +R  +   +L++M       D   Y  L+Q   +  + +     F 
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQL-----------------HLVSSGI--------N 641
            M   GL+PD  T   LL GL     L                 H+    I         
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470

Query: 642 KLVSDSEVLDS----------SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           KL +  E+  +            Y ++I+GL KEGL+++A  +   M+  G +P++ T+ 
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYN 530

Query: 692 LLVGSSVG-----------EEIDSRRFAFDSSSF 714
           + +   +            EE+  R F+ DSS+F
Sbjct: 531 VAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTF 564



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 8/326 (2%)

Query: 409 SWNIPIRWLCEN--EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           +  I I  LC +  + +  A+  LG+M    + P   T+   + G C      DA+++F 
Sbjct: 106 TLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFD 165

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++         I+Y+ +++GLC++   T A+++   M + GC     ++N +I  LC  R
Sbjct: 166 EIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR 225

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           + ++A+   S     G      TY+ I+ G   L +  +   +  QM+      +   + 
Sbjct: 226 RANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFT 285

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           IL+  + ++  + +    F +M + G+ PD  T  +L+ G    SQ+       + +V  
Sbjct: 286 ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDS 704
                  +YNILING  K    ++A  LL  M  +   PD  T+  L+      G    +
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVA 405

Query: 705 RRFAFDSSSF---PDSVS-DILAEGL 726
           ++   +  S+   PDS++  IL +GL
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGL 431



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 31/186 (16%)

Query: 115 MEGLCQNMVKERYPNVREALI-----------SLVFSFV-----NHYRVNGAMRVLVNMN 158
           M+G CQ       P V + L            S+ +S +      H  ++ A R+L  M 
Sbjct: 393 MQGFCQ----AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQ 448

Query: 159 SGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
               +  + ++N+++  +     +E  R     +FV       GI P+V T   ++  L 
Sbjct: 449 ESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFV------KGIQPSVVTYTVMISGLL 502

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +      A + FR+M   GC PNS T+ + I+G + N    ++V ++ EM   G   + S
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562

Query: 274 FYTCII 279
            +  ++
Sbjct: 563 TFQMLL 568


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 253/559 (45%), Gaps = 14/559 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           L+ ++V   ++         +   GF +S++  N +LGAIV  K G+ D  + VY++ VK
Sbjct: 160 LIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIV--KVGWVDLAWKVYEDFVK 217

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G + NV TLN ++  L +  ++++       M +KG   +  T+  ++        V +
Sbjct: 218 SGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSE 277

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++  M   G++  L  Y  +I  LC+E   E A R+   M  + L P+  T+  ++ 
Sbjct: 278 AFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLV 337

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C    + +A  +  +M+  G+ P    F  IV      G+   ++ + E   G    P
Sbjct: 338 ESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVP 397

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
               +  L+   C       A  +  +M +R  + D  ++N  +  LC  + +  A EL 
Sbjct: 398 DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV   V PD  T +  + G CK  N   AL +F  ++ +SL  D ++Y+ L++G C+V
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKV 517

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +A E++  M       S  SF+ILI G C +  V +A RL       G   T  T 
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577

Query: 551 TKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             I+ G ++   L +A D L     M+ EG   D   Y  LI S  ++          N 
Sbjct: 578 NTIIKGYLRAGNLSKANDFL---NTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINN 634

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M + GL+P+  T  ++L G +   ++      ++K++      D S Y  LING   +  
Sbjct: 635 MEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDN 694

Query: 668 TSQASYLLDLMLGKGWVPD 686
             +A  + D ML +G+VPD
Sbjct: 695 MKEAFRVHDEMLQRGFVPD 713



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/503 (21%), Positives = 217/503 (43%), Gaps = 11/503 (2%)

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           V   + L+    +  ++    + F+ + K+G C +      ++  ++    VD +  +  
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +    G  + +     ++  LC++ KL+        M    +  D +TY  L+N  C   
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----N 377
            + +A  +++ M   GL P    +  ++ GLC+ G ++ +   L++  G    P+    N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            +L   C     + A+ +  +M  R +  D  S++  +     N E+ +A     +M   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            +VPD   Y+  + G C+  +   AL++  ++  +  V+D ++Y+ L+ GLC+ + + +A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            E+F  M + G      +   LI+G C    + KA+ L              TY  +M G
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 557 LVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
             K   +++AK+L      M+         ++ ILI        + +    ++ M + G+
Sbjct: 514 FCKVGEMEKAKELWY---DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 570

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P   T  +++ G      L   +  +N ++S+    D   YN LIN   KE    +A +
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFF 630

Query: 674 LLDLMLGKGWVPDATTHGLLVGS 696
           L++ M  +G +P+  T+  ++G 
Sbjct: 631 LINNMEERGLLPNLVTYNAILGG 653



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 67/154 (43%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EM + GI P + T N +++       +  A D    M  +G  P+  T+  +I   +
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                D +  ++  M + G+   L  Y  I+    R  +++EA  +   M    + PD+ 
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKS 680

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           TY  LIN       + +A  + ++M+  G  P D
Sbjct: 681 TYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 256/573 (44%), Gaps = 45/573 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA--IVEEKRGFADFVFVYKEM 193
           S+V   V   R+  A+ +   + + G K+SV +   ++    +  E R   D   +++E 
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALD---IFEET 308

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G+VP   T   L+    E    E A +  R+M   G  P++  F +VIKGL+ +   
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D+VS+  EM D GI    + Y  +I  LC+  K+ EA+ L++ M    + P  +TY  L
Sbjct: 369 KDAVSLFKEMADSGIPDAFT-YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           + C C N  +D+A  +  +M   G TP    +  +++G      FD+             
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK------------- 474

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGR 432
                             A  +L +M    ++  D ++N  I  LC    + +  E+L R
Sbjct: 475 ------------------AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKR 516

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
                 VP   TY++ + G  K      A  V++Q+ A+ +  + ++Y+  ++G C+   
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
              A+++   +   G     +++N LI+G C    +  A+++  L    G     S Y  
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            + G   L+  ++ L +  +M+ EG  LD   Y  LI   S+   +      ++ MV  G
Sbjct: 637 FITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696

Query: 613 LVPDRETMLSLLHGL---ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            +PD  T  +L HGL    D      +   +N+L     VL   MYN+LING  + G   
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL---MYNMLINGYLRNGKLQ 753

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVG-SSVGEE 701
           +A  L D ML +  +PD TT+ +LVG  S+G +
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYDILVGMKSLGSD 786



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 244/576 (42%), Gaps = 72/576 (12%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G  L   +F+VV+ A  +E   + D V ++ EM  + I P+    +  +  L +  
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGM-YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               AL   R+M   G  P   TF  V+  L+   R+++++ I  E+   G ++ +   T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++   C + ++ +A+ +F+      L+P ++TY  LI    E    + A ++   M   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           GL P+ + F  +++GL     + ++V+                               + 
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVS-------------------------------LF 375

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           ++MAD  I D  ++NI I WLC+  +IR+A  L  +M  + V P   TY + +L  C   
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNG 435

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ++A++++ ++  +    + ++Y+ L++G        +A  +   M +NG S +  ++N
Sbjct: 436 CMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYN 495

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI GLCV+ +V +   +     + G   T  TY  I+ G +K         V  QM  +
Sbjct: 496 TLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAK 555

Query: 577 G--------------------CAL---------------DVEAYCILIQSMSEQNKLKDC 601
           G                    C L               D+ AY  LI    ++  +   
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHA 615

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                +M+K GL+P+     S + G  +   +        K++ +   LD++ Y  LI+G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDG 675

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGL 692
             K+G  + A  L   M+ KG +PD     A THGL
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 219/508 (43%), Gaps = 51/508 (10%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +G  P++++   ++     ++   D++++L EM   G  L+   +  ++    +E  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND---ILEDMIVIGLTPTDDV 344
            ++A+RLF  M A ++ PD+      I  LC   +L DAN    +L  M   G  P D  
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLC---KLRDANRALLVLRKMQDAGFVPWDFT 249

Query: 345 FVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
           F  +V  L + G+ +E+++  ++      K   V +    L+   C   +   A  I E+
Sbjct: 250 FNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA--TTLMHGYCLQREVRKALDIFEE 307

Query: 399 MADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                +   D ++ + IR   E     KAYEL  +M    ++P    ++  + G      
Sbjct: 308 TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL 367

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           ++DA+ +F+++ A S + D+ +Y+ L+  LCQ  KI EA+ ++  M++ G      +++ 
Sbjct: 368 WKDAVSLFKEM-ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L+   CV   +D+A++L +     G +    TYT +M G +          +LA+M   G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 578 CALDVEAYCILIQSMS---------------EQNKLKDCALFFNVM----VKAGLV---- 614
            + +   Y  LI  +                E       A+ +N +    +KAG++    
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 615 ------------PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
                       P+  T  S + G    S   L    +N +       D + YN LI G 
Sbjct: 547 AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGF 606

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +EG  S A  +L LML  G +P+ + +
Sbjct: 607 CQEGNMSHALQVLVLMLKDGLLPNISVY 634


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 148/591 (25%), Positives = 261/591 (44%), Gaps = 57/591 (9%)

Query: 139 FSFVNHYRVNGAM---RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           F F NH+ ++ +    +  +  N+GGF +S +  N+ +           D +  +  MV+
Sbjct: 33  FLFFNHHHISTSACTRKPSLPQNNGGF-VSNNSTNISID----------DALASFYRMVR 81

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
               P+V      L    +  +  + +    +M   G   N  +  ++I  L   + VD 
Sbjct: 82  MNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDF 141

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +VSILG+MF LGI    S +  +I  LC E K++EA+ LF  M      P+ ++Y  +IN
Sbjct: 142 AVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIIN 201

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+      A D+ + M   G  P    +  I+  LC+    ++++ FL +        
Sbjct: 202 GLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSE-------- 253

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                                  M DR I  +  ++N  +   C   ++ +A  L   MV
Sbjct: 254 -----------------------MLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              V+PD  T +  V G CK     +A  VF  ++ + +  +  +Y+ L++G C    + 
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA +VF  M + GC+    S+NILI G C  R++D+A  L +  Y    +  T TY+ +M
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL +  R K+ L +  +M   G   ++  Y IL+    +   L +       M +  L 
Sbjct: 411 QGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE 470

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P+      L+ G+    +L +     +KL +D        Y ++I GL KEGL+ +A  L
Sbjct: 471 PNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDL 530

Query: 675 LDLMLGKGWVPDATTHGLLV-------GSSVG----EEIDSRRFAFDSSSF 714
              M   G++P++ ++ +++        SS      +E+  +RF+ + S+F
Sbjct: 531 FRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTF 581



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/560 (23%), Positives = 254/560 (45%), Gaps = 50/560 (8%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           +V MN    + SV  F   LG+  ++K+ ++  V +  +M   G+  NV +LN L+  L 
Sbjct: 79  MVRMNP---RPSVAEFGKFLGSFAKKKQ-YSTVVSLCNQMDLFGVTHNVYSLNVLINCLC 134

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
             N ++ A+    +M K G  P + TF  +I GL    ++ ++V +  EM   G +  + 
Sbjct: 135 RLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVI 194

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  II  LC+      A+ +FK M      PD +TY  +I+ LC++  ++DA + L +M
Sbjct: 195 SYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEM 254

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKF 389
           +  G+ P    +  +V G C +G+ +E+    ++  G    P       L++  C  G  
Sbjct: 255 LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMV 314

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A+ + E M ++ +  +  ++N  +   C    + +A ++   M+     P   +Y+  
Sbjct: 315 SEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNIL 374

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G CK    ++A  +  ++  ++L  D+++YS L++GLCQ  +  EA+ +F  M   G 
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKD 565
             +  +++IL+ G C    +D+A++L               +T ++ G+    KL+ AK+
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKE 494

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           L    +++  +G    +  Y ++I+ + ++    +    F  M   G +P          
Sbjct: 495 L---FSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP---------- 541

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                                    +S  YN++I G  +   +S A  L+D M+GK +  
Sbjct: 542 -------------------------NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSA 576

Query: 686 DATTHGLLVGSSVGEEIDSR 705
           + +T  +L+     +EI S+
Sbjct: 577 NLSTFQMLLDLESQDEIISQ 596



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 23/196 (11%)

Query: 115 MEGLCQ--------NMVKER-----YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+GLCQ        N+ KE       PN+    I L+  F  H  ++ A+++L +M    
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI-LLDGFCKHGHLDEALKLLKSMQEKK 468

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA----GIVPNVDTLNYLLEVLFETNR 217
            +      N+V   I+ E    A  + V KE+       GI P + T   +++ L +   
Sbjct: 469 LEP-----NIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGL 523

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            + A D FR+M   G  PNS ++ ++I+G + N     ++ ++ EM        LS +  
Sbjct: 524 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQM 583

Query: 278 IIPMLCRENKLEEAIR 293
           ++ +  ++  + + +R
Sbjct: 584 LLDLESQDEIISQFMR 599


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 136/571 (23%), Positives = 246/571 (43%), Gaps = 50/571 (8%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF--VYKEMV 194
           +V S+ +   ++ A+  +    S GF   V  +N VL AIV   RG        VY+EM+
Sbjct: 148 MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVR-SRGSVKLSAEEVYREMI 206

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           ++ + PNV T N L+        ++  L  F  M + GC PN  T+  +I       R+D
Sbjct: 207 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 266

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++  +L  M   G+Q  L  Y  II  LCRE  ++EA  + + M      PDE+TY  L+
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 326

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N  C+      A  I  +M+  G++P+   +  ++  +C+    + ++ F          
Sbjct: 327 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF---------- 376

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRM 433
                                 ++M  R +   + ++   I        + +AY +L  M
Sbjct: 377 ---------------------FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
             S   P   TY+AF+ G C L   E+AL V +++  + L  D +SYS ++ G C+  ++
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A ++   M + G S  + +++ LI GLC MR++ +A  L       G      TYT +
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 535

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +            L +  +M+ +G   D   Y +LI  +++Q + ++       ++    
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 595

Query: 614 VP---------------DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           VP               + +++++L+ G      +H        +V  +     ++YN++
Sbjct: 596 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 655

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           I+G  + G   +A  L   M+  G+VP   T
Sbjct: 656 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVT 686



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 229/530 (43%), Gaps = 43/530 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALIS---LVFSFVNHYRVNGAMR 152
           D YCKM       G ++E  GL ++M  K   PN    LIS   ++        +  A  
Sbjct: 257 DAYCKM-------GRIDEAFGLLKSMSSKGMQPN----LISYNVIINGLCREGSMKEAWE 305

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           +L  M   GF      +N +L    +E   F   + ++ EMV+ G+ P+V T   L+  +
Sbjct: 306 ILEEMGYKGFTPDEVTYNTLLNGYCKEGN-FHQALVIHAEMVRNGVSPSVVTYTALINSM 364

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +   +  A++ F +M  +G  PN RT+  +I G      ++++  IL EM + G    +
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y   I   C   ++EEA+ + + M    L PD ++Y  +I+  C    LD A  + ++
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           M+  G++P    +  +++GLCE+ +  E+ +  ++       P    +  L+   C  G 
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 389 FFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  + ++M  +  + D  ++++ I  L +    R+A  LL +++    VP   TY  
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 604

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   C   N E     F+ V A            L++G C    + EA  VF  M +  
Sbjct: 605 LI-ENCS--NIE-----FKSVVA------------LIKGFCMKGLMHEADRVFESMVERN 644

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                + +N++I+G C    + KA  L      SG    T T   ++  L K    +++ 
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 704

Query: 568 VVLAQMLVEGCAL-DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
            V+   L   C L + E   +L++   ++  ++        M K GL+P+
Sbjct: 705 EVIGDTL-RSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 206/452 (45%), Gaps = 44/452 (9%)

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN---LRLDDANDILEDMIVIGLTPTD 342
           N +++A+    + ++   MP  L+Y  +++ +  +   ++L  A ++  +MI   ++P  
Sbjct: 156 NMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS-AEEVYREMIRSRVSPNV 214

Query: 343 DVFVDIVRGLCEVGKFDESVN-FLE---DKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
             +  ++RG C VG+  + +  F E   + C      +N L++  C  G+   A  +L+ 
Sbjct: 215 YTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 274

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M+ + +  +  S+N+ I  LC    +++A+E+L  M      PD  TY+  + G CK  N
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           +  AL +  ++    +    ++Y+ L+  +C+   +  A+E F  M   G   +  ++  
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI G      +++A R+ +    SG S +  TY   + G   L+R ++ L V+ +M+ +G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL---- 633
            A DV +Y  +I     + +L         MV+ G+ PD  T  SL+ GL +  +L    
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514

Query: 634 ------------------------HLVSSGINK-------LVSDSEVLDSSMYNILINGL 662
                                   + V   +NK       ++    + D+  Y++LINGL
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K+  T +A  LL  ++ +  VP   T+  L+
Sbjct: 575 NKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 159/358 (44%), Gaps = 7/358 (1%)

Query: 344 VFVDIVRGLCEVGKFDESVNF--LEDKCGYVTS--PHNALLECCCNAG---KFFLAKCIL 396
           VF  +V+    +   D++VN   L    G++     +N++L+    +    K    +   
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           E +  R   +  ++NI IR  C   E++K     G M  +  +P+  TY+  +   CK+ 
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ++A  + + +S++ +  + ISY+ ++ GLC+   + EA E+   M   G +    ++N
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            L+ G C      +A+ + +    +G S +  TYT ++  + K +     +    QM + 
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   +   Y  LI   S Q  L +     N M ++G  P   T  + +HG     ++   
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 443

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              + ++V      D   Y+ +I+G  ++G   +A  +   M+ KG  PDA T+  L+
Sbjct: 444 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 265/563 (47%), Gaps = 35/563 (6%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           S+ ++NV+L + + E R   + V ++YK+MV A + P   T N L+ +L ++  +E A +
Sbjct: 111 SIYLYNVLLKSCIRENR--VELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F +M  +GC PN  TF I+++G          + +LG+M  +GI      Y  +I   C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV---IGLT- 339
           +E K  +A +L   MR   L+P   T+   I+ LC + ++ +A+ I  DM +   +GL  
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 340 PTDDVFVDIVRGLCEVGKFDES---VNFLEDKCGYVT-SPHNALLECCCNAGKFFLAKCI 395
           P    +  ++ G C+ G  +E+   V+ ++    ++    +N  L      GK   A  +
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L++M    I  D  S+NI +  LC+N  +  A  L+G M+ + ++PD  TYS  + G C 
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                +A  +  ++ + +   ++ + + L+  L +  +I+EA  +   M++ G  + + +
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVT 468

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-----------------------TYT 551
            NI+I  LC   ++DKAI + +  ++ G++   +                       TY+
Sbjct: 469 CNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYS 528

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I+ GL K  R  D      +M+ +G   D   Y   I S   + K+         M K 
Sbjct: 529 TIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR 588

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G     +T  SL+ GL   +Q+  +   I+++       D   YN ++N L + G  + A
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDA 648

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             +LD ML KG  P+ ++  +L+
Sbjct: 649 PSVLDEMLQKGISPNISSFRILI 671



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 150/619 (24%), Positives = 270/619 (43%), Gaps = 49/619 (7%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
            + +L  M + G   +  ++N ++ +  +E +   D   +  +M + G+VP+V+T N  +
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTH-DAEKLVDKMREDGLVPHVETFNSRI 259

Query: 210 EVLFETNRIESALDQFRRMH---KKGCC-PNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L  + +I  A   FR M    + G   PN  T+++++ G      ++++ +++  M  
Sbjct: 260 SALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKR 319

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
               + L  Y   +  L R  KL EA  + K M  + + PD  +Y  +++ LC+N  L D
Sbjct: 320 NANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSD 379

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLE 381
           A  ++  MI  G+ P    +  ++ G C  GK  E+ N L +      SP+    N LL 
Sbjct: 380 ARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLH 439

Query: 382 CCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL----------- 429
                G+   A+ +L+KM ++    D  + NI I  LC N ++ KA E+           
Sbjct: 440 SLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAA 499

Query: 430 ---LGRMVVSSV---------VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
              LG   +  V          PD  TYS  + G CK    +DA + F ++ ++ L  DS
Sbjct: 500 LGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDS 559

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             Y   +   C+  KI+ A +V   M K GC+ +  ++N LI GL    ++ +   L   
Sbjct: 560 AIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDE 619

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G S    TY  ++  L +  R  D   VL +ML +G + ++ ++ ILI++  +   
Sbjct: 620 MREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACD 679

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLL-HGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            K     F + +   +   +E + +L+ + L  G ++          +  S  + + +Y 
Sbjct: 680 FKASHEVFEIALN--VCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYK 737

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGW-------VPDATTHGLLVGSSVGEEIDSRRFAF 709
            LI+ L K+     AS +L  ++ KG+       +P     G +    V +E+  R    
Sbjct: 738 DLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEM 797

Query: 710 DSSS------FPDSVSDIL 722
            S S      +P+    IL
Sbjct: 798 ASESNKENKAYPNVKGHIL 816



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/428 (22%), Positives = 192/428 (44%), Gaps = 42/428 (9%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRA--LDLMPDELTYEELI-NCLCENLRLDDANDILEDMI 334
           ++ +L +     +AI  FK +R+   +  P    Y  L+ +C+ EN R++  + + +DM+
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIREN-RVELVSWLYKDMV 139

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
           +  ++P    F                               N L+   C++G    A+ 
Sbjct: 140 LARVSPEAYTF-------------------------------NLLIGLLCDSGHLEDARE 168

Query: 395 ILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           + +KM  R     + ++ I +R  C      K  ELLG+M    ++P+   Y+  +   C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K     DA ++  ++    LV    +++  +  LC   KI EA  +F  M  +   L   
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE-ELGLP 287

Query: 514 SFNILIY-----GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             N++ Y     G C    +++A  L      +       +Y   +LGL++  +  +  +
Sbjct: 288 HPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWI 347

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           VL +ML  G   D+ +Y I++  + +   L D  +   +M++ G++PD  T  +LLHG  
Sbjct: 348 VLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYC 407

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              ++   ++ +++++S++   ++   N+L++ LWKEG  S+A  LL  M  KG+  D  
Sbjct: 408 SKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTV 467

Query: 689 THGLLVGS 696
           T  +++ +
Sbjct: 468 TCNIIINA 475



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 19/369 (5%)

Query: 95  TADTY-CKMILK-LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR 152
           + +TY C ++L  L   G + E E L Q M ++ Y         ++ +  N+ +++ A+ 
Sbjct: 428 SPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIE 487

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           ++  M + G        +  LG +     G  D     K+       P++ T + ++  L
Sbjct: 488 IVNGMWTHG--------SAALGNLGNSFIGLVDDTISGKK-----CTPDLVTYSTIISGL 534

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +  R++ A  +F  M  KG  P+S  ++  I       ++  +  +L +M   G    L
Sbjct: 535 CKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTL 594

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y  +I  L  +N++ E   L   MR   + PD  TY  ++NCLCE  R++DA  +L++
Sbjct: 595 QTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDE 654

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---DKCGYVTSPHNALLECCCNAGKF 389
           M+  G++P    F  +++  C+   F  S    E   + CG+  + +  +       GK 
Sbjct: 655 MLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKV 714

Query: 390 FLAKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             AK + E   DR     +  +   I  LC++E++  A ++L R++      D A++   
Sbjct: 715 AEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPV 774

Query: 449 VLGKCKLCN 457
           + G  K+ N
Sbjct: 775 IDGFGKMGN 783


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 150/627 (23%), Positives = 274/627 (43%), Gaps = 46/627 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I   G      E + + + M  +       A  +L+  F+       A RV   M
Sbjct: 308 TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM 367

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFV---FVYKEMVKAGIVPNVDTLNYLLEVLFE 214
            + G KL++  +N ++  + +    F D      +  EM+  GI P+  T N ++E   +
Sbjct: 368 LARGVKLNLFTYNALVKGVCK----FGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLK 423

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
                   D    M K    P + T  ++I GL  +  ++D+  +   M  LG++     
Sbjct: 424 EQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVI 483

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT +I    +E + +EA+R+ K+M    + PD L Y  +I  LC++ ++++A D L +MI
Sbjct: 484 YTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMI 543

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFF 390
             GL P    +  ++ G C+ G+   +  + ++  G   +P++    AL++  C  G   
Sbjct: 544 ERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTT 603

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  I   M  R +  D  +++  I  L  N +++ A ELL   +   +VPD  TY++ +
Sbjct: 604 EATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSII 663

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G CK      A ++   +  + +  + I+Y+ L+ GLC+  +I  A E+F  +   G +
Sbjct: 664 SGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLA 723

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRL-----------RSLAYSS--------GTS------ 544
            ++ ++  +I G C    + KA RL            S  YS+        G +      
Sbjct: 724 HNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL 783

Query: 545 ---------YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                     +TS+   +M G  K  +  +   +L  M+ +    D   Y ILI    + 
Sbjct: 784 FLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKT 843

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             LK+   FF  M K  L+P+  T  +LL G     +   + +  +++++     D   +
Sbjct: 844 GFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTW 903

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKG 682
           +++I+   KEG   +   L+D ML KG
Sbjct: 904 SVMIDAHLKEGDHVKTLKLVDDMLKKG 930



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 140/589 (23%), Positives = 251/589 (42%), Gaps = 15/589 (2%)

Query: 144 HYRVNGAM---RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV-KAGIV 199
           H+R   A    R+L  M   G   S+  +NVV+G +   + G  D  F  K+++ K G+V
Sbjct: 246 HFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLC--RAGEVDEAFELKKLMDKKGLV 303

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
            +V T + L++   +  R   A      M  KG  P    +  +I G +      ++  +
Sbjct: 304 ADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRV 363

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM   G++L L  Y  ++  +C+   +E+A  L   M  + + PD  TY  +I    +
Sbjct: 364 KEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLK 423

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
                   D+L +M    L PT      I+ GLC  G  +++    E        P    
Sbjct: 424 EQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVI 483

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +  L++     G+F  A  IL+ M  + +  D   +N  I  LC++ ++ +A + L  M+
Sbjct: 484 YTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMI 543

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              + P+  TY A + G CK    + A R F+++    +  + +  + L++G C+    T
Sbjct: 544 ERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTT 603

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA  +F CM          +++ LI+GL    K+  A+ L S     G      TY  I+
Sbjct: 604 EATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSII 663

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G  K         +   M  +G + ++  Y  LI  + +  +++     F+ +   GL 
Sbjct: 664 SGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLA 723

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            +  T  +++ G      L       +++       DS +Y+ LI+G  KEG T +A  L
Sbjct: 724 HNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL 783

Query: 675 LDLMLGKGWVPDATTHGLLVG-SSVGEEIDSRRF---AFDSSSFPDSVS 719
               + KG+   ++ + L+ G    G+ I++ +      D    PD V+
Sbjct: 784 FLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVT 832



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 160/700 (22%), Positives = 273/700 (39%), Gaps = 73/700 (10%)

Query: 49  DYEAKIQSLRHNLSPDHLIRVL-DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLG 107
           ++E+ +  + + LSPD +  V+    ND    L  F WV  Q  F     ++  + L L 
Sbjct: 53  NWESLLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILC 112

Query: 108 LAGNVEEMEGLCQNMVKERYPNVREALISLVFS--------------------------F 141
            +      + +   M+        E L SL+ S                           
Sbjct: 113 NSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELL 172

Query: 142 VNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           ++ Y+  G    A+   +     GF + +   N +L  +++  +    F   Y  M++A 
Sbjct: 173 IDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANK-LELFWRFYNGMLEAN 231

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           ++ +V T  +L+   F     +        M +KGC P+  T+ +VI G           
Sbjct: 232 VLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGG----------- 280

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
                                   LCR  +++EA  L K+M    L+ D  TY  LI+  
Sbjct: 281 ------------------------LCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGF 316

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS--- 374
            +  R  +A  +LE+M   GL P    +  ++ G    G   E+    E+          
Sbjct: 317 GKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNL 376

Query: 375 -PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +NAL++  C  G    A  +L +M    I  D  ++N  I    + +   +  +LL  
Sbjct: 377 FTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSE 436

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M  S++VP   T    + G C+  + EDA RVF  + +  +  +++ Y+ L++G  Q  +
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
             EAV +   M K G       +N +I GLC  RK+++A          G      TY  
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K    +       +ML  G A +      LI    ++    +    F  M+   
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           + PD  T  +L+HGL    +L      +++ +    V D   YN +I+G  K+G   +A 
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676

Query: 673 YLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS 711
            L + M  KG  P+  T+  L+ G     EI+  R  FD 
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 252/597 (42%), Gaps = 9/597 (1%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            TY  MI       N   ++ L   M K            ++     H  +  A RV   M
Sbjct: 413  TYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIM 472

Query: 158  NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
             S G K +  ++  ++   V+E R F + V + K M K G+ P+V   N ++  L ++ +
Sbjct: 473  VSLGVKPNAVIYTTLIKGHVQEGR-FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRK 531

Query: 218  IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            +E A D    M ++G  PN  T+  +I G   +  +  +     EM   GI       T 
Sbjct: 532  MEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTA 591

Query: 278  IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            +I   C+E    EA  +F+ M    + PD  TY  LI+ L  N +L  A ++L + +  G
Sbjct: 592  LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651

Query: 338  LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
            L P    +  I+ G C+ G   ++    E  C    SP    +NAL+   C AG+   A+
Sbjct: 652  LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAR 711

Query: 394  CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             + + +  + +A +  ++   I   C++  + KA+ L   M +  V PD   YSA + G 
Sbjct: 712  ELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771

Query: 453  CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
             K  N E AL +F + S Q     + S + L++G C+  K+ EA ++   M         
Sbjct: 772  RKEGNTEKALSLFLE-SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDH 830

Query: 513  SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             ++ ILI   C    + +A +               TYT ++ G     R  ++  +  +
Sbjct: 831  VTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890

Query: 573  MLVEGCALDVEAYCILIQS-MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M+ +    D   + ++I + + E + +K   L  +++ K G V  +     L+  L    
Sbjct: 891  MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNV-SKNVCHVLIDPLCRKE 949

Query: 632  QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
             +  V   + K+      L  +  + L+    K G    A+ +L  M+   WVPD+T
Sbjct: 950  HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDST 1006



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/561 (20%), Positives = 233/561 (41%), Gaps = 50/561 (8%)

Query: 115  MEGLCQNMVKERYPNVREALISL------------VFSFVNHYRVNGAMRVLVNMNSGGF 162
            + GLC++   E    V E ++SL            +   V   R   A+R+L  M+  G 
Sbjct: 453  INGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512

Query: 163  KLSVDVFNVVLGAIVEEK--------------RGFADFVFVY------------------ 190
            +  V  +N V+  + + +              RG    V+ Y                  
Sbjct: 513  QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR 572

Query: 191  --KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
              KEM+  GI PN      L++   +      A   FR M  +   P+ RT+  +I GL+
Sbjct: 573  YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL 632

Query: 249  ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             N ++  ++ +L E  + G+  ++  Y  II   C++  + +A +L + M    + P+ +
Sbjct: 633  RNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNII 692

Query: 309  TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            TY  LIN LC+   ++ A ++ + +   GL      +  I+ G C+ G   ++    ++ 
Sbjct: 693  TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752

Query: 369  CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
                  P    ++AL++ C   G    A  +  +   +  A   S N  +   C++ ++ 
Sbjct: 753  TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812

Query: 425  KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            +A +LL  MV   V PD  TY+  +   CK    ++A + F  +  ++L+ ++++Y+ L+
Sbjct: 813  EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872

Query: 485  EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
             G     + +E   +F  M          +++++I          K ++L       G +
Sbjct: 873  SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGN 932

Query: 545  YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             + +    ++  L + +   ++L VL ++  +G  L +     L++   +  K+   A  
Sbjct: 933  VSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARV 992

Query: 605  FNVMVKAGLVPDRETMLSLLH 625
               MV+   VPD   +  L++
Sbjct: 993  LKSMVRFKWVPDSTELNDLIN 1013



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 14/253 (5%)

Query: 87   SIQKRFQHTA------DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS 140
            S+QK F  T+      D +CK       +G V E   L ++MV +           L+  
Sbjct: 787  SVQKGFASTSSLNALMDGFCK-------SGKVIEANQLLEDMVDKHVKPDHVTYTILIDY 839

Query: 141  FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
                  +  A +  V+M       +   +  +L       R  ++   ++ EM+   I P
Sbjct: 840  HCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRR-SEMFALFDEMIAKDIEP 898

Query: 201  NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
            +  T + +++   +       L     M KKG   +     ++I  L     V + + +L
Sbjct: 899  DGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVL 958

Query: 261  GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
             ++ + G+ L L+  + ++    +  K++ A R+ K M     +PD     +LIN   ++
Sbjct: 959  EKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDS 1018

Query: 321  LRLDDANDILEDM 333
               ++A D L+ M
Sbjct: 1019 TDSENAGDFLKQM 1031



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 9/280 (3%)

Query: 73   TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
            + +LS A ++F  +++ K     +  Y  +I      GN E+   L    V++ + +   
Sbjct: 739  SGNLSKAFRLFDEMTL-KGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAST-S 796

Query: 133  ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF---ADFVFV 189
            +L +L+  F    +V  A ++L +M     K     + +++      K GF   A+  FV
Sbjct: 797  SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILID--YHCKTGFLKEAEQFFV 854

Query: 190  YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
              +M K  ++PN  T   LL       R       F  M  K   P+  T+ ++I   + 
Sbjct: 855  --DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912

Query: 250  NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
                  ++ ++ +M   G  +  +    +I  LCR+  + E +++ + +    L     T
Sbjct: 913  EGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLAT 972

Query: 310  YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
               L+ C  +  ++D A  +L+ M+     P      D++
Sbjct: 973  CSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 248/529 (46%), Gaps = 37/529 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L +I + K  ++  + +  +M   GI P+V TLN L+       R+  A     ++
Sbjct: 153 FTKLLTSIAKMKH-YSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL 211

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K GC P++ TF  +I+GL    ++ +++ +  +    G Q ++  Y  ++  LC+    
Sbjct: 212 LKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNT 271

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  P+ + Y  +I+ LC++ ++ +A ++  +MI  G++P  D+F   
Sbjct: 272 SAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP--DIFT-- 327

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                      +N+L+   CN  ++     +L +M + KI  + 
Sbjct: 328 ---------------------------YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 360

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
             ++  +  LC+   I  A++++  M+   V PD  TY+A + G C     ++A++VF  
Sbjct: 361 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 420

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +  V +  SY+ L+ G CQ++++ +A+ +   MS  G    + ++N LI+GLC + +
Sbjct: 421 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 480

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE--AY 585
           +  AI L     +SG      TY  ++  L K     + +V+L    +EG  LD +   Y
Sbjct: 481 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA--IEGSNLDADILVY 538

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            I I  M    +L+     F+ +   GL PD  T   ++HGL     L   +    K+  
Sbjct: 539 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 598

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    D  +YN +I G  +   T  A+ LL  ML +G+  D +T  L+V
Sbjct: 599 NGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIV 647



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 217/464 (46%), Gaps = 8/464 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVK 195
           L+ SF +  R+  A  VL  +   G +     FN ++ G  VE K G A  + ++ + + 
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA--LHLFDKTIG 248

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P+V T   L+  L +     +A+   R M +K C PN   +  +I  L  + +V +
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + ++  EM   GI  ++  Y  +I  LC   + +    L   M    +MP+ + +  +++
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGY 371
            LC+   +  A+D+++ MI  G+ P    +  ++ G C   + DE+V      +   C  
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
               +N L+   C   +   A  +LE+M+ +  IAD  ++N  I  LC    ++ A  L 
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV S  +PD  TY   +   CK  +  +A+ + + +   +L  D + Y+  ++G+C+ 
Sbjct: 489 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 548

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++  A ++F  +S  G      ++NI+I+GLC    +D+A +L      +G S     Y
Sbjct: 549 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIY 608

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             I+ G ++         +L +ML EG + DV    ++++ +S+
Sbjct: 609 NTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSD 652



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           +T  +TK++  + K++    +L +  QM   G   DV    ILI S     +L       
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 208

Query: 606 NVMVKAGLVPDRETMLSLLHGL----ADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
             ++K G  PD  T  +L+ GL      G  LHL     +K + +    D   Y  L+NG
Sbjct: 209 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL----FDKTIGEGFQPDVVTYGTLMNG 264

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           L K G TS A  LL  M+ K   P+   +  ++ S
Sbjct: 265 LCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 299


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 248/532 (46%), Gaps = 7/532 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           SV  +N+VL ++               EM + G+ P + T N ++  L ++N + + ++ 
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F  + K+G  P+  T+  +I  L     ++++  + G M   G    +  Y+ +I  LC+
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 285 ENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMI--VIGLTP 340
             +++EA  L + M  ++ D++P+ +TY   ++ LC+     +A +++  +    + ++P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS--PHNALLECCCNAGKFFLAKCILEK 398
               F  ++ GLC+ G+ DE+ N      GYV +   +NAL+   C A K   A  ++E 
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIES 283

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M D+ +  D  ++++ +   C+   + +A ELL  M      P+  T+++ + G CK   
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
             +A ++  QV  + LV D ++++ L+ G C+     +A  +F  M          +F  
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI GLC   +V+ A  +  L  + G      TY  ++ GL K  R ++    L +M+  G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           C  +   Y  L+ ++   ++  D     + +   G  PD  T   L+ GL    +     
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           + + ++V      DS  +     GL + G  +    LL ++L KG +PDATT
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 240/533 (45%), Gaps = 58/533 (10%)

Query: 240 FEIVIKGLIANSRVDDSVSIL-GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           + IV++ L        ++ I  GEM   G+   +  Y  II  LC+ N+L   + LF+ +
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD +TY  LI+ LC+   L++A  +   M   G  P    +  ++ GLC+VG+ 
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 359 DESVNFLED----KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMAD---RKIADCDS 409
           DE+   +++     C  + +   +N+ L+  C       A  ++  + D   R   D  +
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           ++  I  LC+  +  +A      M+    VP+  TY+A V G CK    E A  +   + 
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + +  D I+YS LV+  C+  ++ EA+E+   M+  GC+ +  +FN +I GLC   +  
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 530 KAIRLRSLAYS-------------------SGTSYTTS----------------TYTKIM 554
           +A ++    Y+                   +G     S                T+  ++
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 555 LGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            GL K   ++ A+D+L ++  +   G   +V  Y +L+  + +  ++++   F   MV +
Sbjct: 406 DGLCKAGQVEAARDILDLMGNL---GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS 462

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G VP+  T  SL++ L   S+       ++KL S     D+  YNIL++GLWK G T QA
Sbjct: 463 GCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQA 522

Query: 672 SYLLDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
             +L+ M+GKG  PD+ T      GL    ++   ++  R        PD+ +
Sbjct: 523 ITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 232/512 (45%), Gaps = 47/512 (9%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   ++  +N ++  + +        + +++E+VK G  P+V T N L++ L +  
Sbjct: 72  MARDGVAPTIVTYNTIINGLCKSNE-LGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAG 130

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF--DLGIQLELSF 274
            +E A      M  +GC PN  T+ ++I GL    R+D++  ++ EM      +   +  
Sbjct: 131 DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 190

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMR--ALDLMPDELTYEELINCLCENLRLDDANDILED 332
           Y   +  LC+++   EA  L + +R  +L + PD +T+  LI+ LC+  + D+A +  +D
Sbjct: 191 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DD 248

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           MI  G  P    +  +V GLC+  K + +   +E       +P    ++ L++  C A +
Sbjct: 249 MIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 308

Query: 389 FFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +L  MA R    +  ++N  I  LC+++   +A+++  ++    +VPD  T++ 
Sbjct: 309 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNI 368

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDS------------------------------ 477
            + G CK  N+E A  +F ++ A+++  D                               
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 428

Query: 478 -----ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
                ++Y+ LV GLC+  +I E  E    M  +GC   S ++  L+Y LC   + D A+
Sbjct: 429 VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDAL 488

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +L S   S G    T TY  ++ GL K  + +  + VL +M+ +G   D   +      +
Sbjct: 489 QLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGL 548

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
                L        V++  G++PD  T  S+L
Sbjct: 549 HRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 168/335 (50%), Gaps = 6/335 (1%)

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           +M +GG+  +V  +N ++  + +  +       + + MV  G+ P+V T + L++   + 
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI-ESMVDKGVTPDVITYSVLVDAFCKA 306

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           +R++ AL+    M  +GC PN  TF  +I GL  + R  ++  I  ++++  +  +   +
Sbjct: 307 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTF 366

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C+    E+A  LF+ M A ++ PD +T+  LI+ LC+  +++ A DIL+ M  
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFL 391
           +G+ P    +  +V GLC+ G+ +E   FLE+     C   +  + +L+   C A +   
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  ++ K+       D  ++NI +  L ++ +  +A  +L  MV     PD  T++A   
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           G  +  N    + + R V A+ ++ D+ + S +++
Sbjct: 547 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 3/208 (1%)

Query: 109 AGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           AGN E+   L + MV K   P+V     +L+       +V  A  +L  M + G   +V 
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVM-TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 434

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +NV++  + +  R      F+ +EMV +G VP   T   L+  L   +R + AL    +
Sbjct: 435 TYNVLVHGLCKSGRIEEPCEFL-EEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSK 493

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           +   G  P++ T+ I++ GL  + + + ++++L EM   G Q +   +      L R   
Sbjct: 494 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGN 553

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELIN 315
           L   + L +++ A  ++PD  T   +++
Sbjct: 554 LAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 245/551 (44%), Gaps = 25/551 (4%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++ +V  +N +L  +  E R       V++EM+     P+  T   LL  L  +N++E 
Sbjct: 2   GYEHNVFTYNKLLLQLTREHR-HDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A     RM + GC P+   +  +I G         +   L EM        +  YT I+ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+  +  +A++L   MR     P+  TY  ++  LCE  +LD+A  +LE+M V G  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFL------EDKCGYVTSPHNALLECCCNAGKFFLAKC 394
               +   ++GLC+  + DE+  FL       D   Y T     ++   C +G    A  
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTT-----VINGLCKSGDLDSASR 235

Query: 395 ILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +L+ M++R    D  +++  I   C+  E+ +A  LL  M+     P+   Y++ +    
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           +L +   A  +  ++  +    D +SY+  ++GLC+ E++ +A  VF  M + GC+ ++S
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355

Query: 514 SFNILIY----------GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML-GLVKLQR 562
           S+++LI           GLC   + D+A  L S             +  +ML    K ++
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
               L +  QML + C  +V  + IL+  +   ++L D       MV  G +PD  T  +
Sbjct: 416 IDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 474

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+  +    +         + V    V D   Y+ LI GL  E +  +A  L   ++ + 
Sbjct: 475 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERR 534

Query: 683 WVPDATTHGLL 693
           WVPD  T GLL
Sbjct: 535 WVPDDKTLGLL 545



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 121/533 (22%), Positives = 232/533 (43%), Gaps = 54/533 (10%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           ++H   TY K++L+L      ++   + Q M+ +           L+       ++  A 
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           ++L  M   G      ++N ++    + K     F F+  EMVK   +P V T   +++ 
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL-AEMVKNHCLPTVVTYTNIVDG 121

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L +  R   A+     M  KGC PN  T+ ++++GL    ++D++  +L EM   G   +
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  Y   I  LC+ ++++EA +    M    + PD ++Y  +IN LC++  LD A+ +L+
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
            M   G TP    +  ++ G C+ G+ + ++  L+        P    +N+LL      G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A+ +L +M  R    D  S+N  I  LC+ E ++KA  +  RMV     P+ ++YS
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 447 AFVL----------GKCKLCNYEDALRVFRQVSAQSL----------VLDS--------- 477
             ++          G CK   +++A  +F +V  + +          +LDS         
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 478 ----------------ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
                           ++++ LV GLC  +++++A  +   M   G      ++  L+  
Sbjct: 419 ALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +C   K   A+ L   A   G      TY+ ++ GLV    A++  ++  +++
Sbjct: 479 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLV 531



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 222/484 (45%), Gaps = 59/484 (12%)

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           +G +  +  Y  ++  L RE++ ++A  +F+ M      PD  T+  L+  LC + +L+ 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLE 381
           A  +L  M  +G  P D ++  ++ G  +   F ++  FL    ++ C      +  +++
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 382 CCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C A +   A  +L++M D+  + +  ++N+ +  LCE  ++ +A ++L  M V    P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  TY++F+ G CK C+  D  R F  ++   +  D +SY+ ++ GLC+   +  A  + 
Sbjct: 181 DVVTYNSFIKGLCK-CDRVDEARKF--LARMPVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             MS  GC+    +++ LI G C   +V++A+ L       G       Y  ++  L +L
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 561 ---QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
               +A+D+LV   +M   G   DV +Y   I  + +  ++K     F+ MV+ G  P+ 
Sbjct: 298 GHIGKAEDMLV---EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354

Query: 618 E--TML--------SLLHGLADGSQLH----LVSSGINKLVSDSEV------LDSS---- 653
              +ML         LL GL  G +      L S  +++ + + +V      LDS     
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414

Query: 654 ---------------------MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                                 +NIL++GL  +   S A  +L  M+ +G++PD  T+G 
Sbjct: 415 QIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 474

Query: 693 LVGS 696
           LV +
Sbjct: 475 LVDA 478



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 5/321 (1%)

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  + ++M D+    D  ++ I +R LC + ++ KA +LLGRM     VPD A Y+A + 
Sbjct: 26  ASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALIS 85

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  K  ++  A +   ++     +   ++Y+ +V+GLC+ E+  +AV++   M   GCS 
Sbjct: 86  GYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSP 145

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++N+++ GLC  RK+D+A ++       G      TY   + GL K  R  +    L
Sbjct: 146 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL 205

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           A+M V     DV +Y  +I  + +   L   +   + M   G  PD  T  SL+ G   G
Sbjct: 206 ARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++      ++ ++      +   YN L+  L + G   +A  +L  M  +G+ PD  ++
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322

Query: 691 GLLV-GSSVGEEIDSRRFAFD 710
              + G    E +   +  FD
Sbjct: 323 NACIDGLCKAERVKKAKAVFD 343


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 161/666 (24%), Positives = 294/666 (44%), Gaps = 62/666 (9%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL---GLAG 110
           ++S+   +SP H+  +     D  +AL    W+S   R++H+  +Y  ++  L   G  G
Sbjct: 81  LKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 140

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
            V ++  L   M+K    +V +AL  L        ++N   R  +      +KL +  +N
Sbjct: 141 VVFKIRLL---MIKS-CDSVGDALYVLDLC----RKMNKDERFELK-----YKLIIGCYN 187

Query: 171 VVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            +L ++   + G  D    VY EM++  + PN+ T N ++    +   +E A     ++ 
Sbjct: 188 TLLNSLA--RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           + G  P+  T+  +I G      +D +  +  EM   G +     YT +I  LC   +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           EA+ LF  M+  +  P   TY  LI  LC + R  +A +++++M   G+ P    +  ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA 405
             LC   KF+++   L         P    +NAL+   C  G    A  ++E M  RK++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  ++N  I+  C++  + KA  +L +M+   V+PD  TY++ + G+C+  N++ A R+
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
              ++ + LV D  +Y+ +++ LC+ +++ EA ++F  + + G + +   +  LI G C 
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             KVD+A                                    ++L +ML + C  +   
Sbjct: 545 AGKVDEA-----------------------------------HLMLEKMLSKNCLPNSLT 569

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           +  LI  +    KLK+  L    MVK GL P   T   L+H L          S   +++
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS 704
           S     D+  Y   I    +EG    A  ++  M   G  PD  T+  L+      ++  
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY--GDLGQ 687

Query: 705 RRFAFD 710
             FAFD
Sbjct: 688 TNFAFD 693



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 160/645 (24%), Positives = 285/645 (44%), Gaps = 29/645 (4%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREA 133
           DL SA K+F  + + K  +     Y  +I  L +A  ++E   L   M  +  +P VR  
Sbjct: 268 DLDSAFKVFNEMPL-KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
            + L+ S     R + A+ ++  M   G K ++  + V++ ++  + + F     +  +M
Sbjct: 327 TV-LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK-FEKARELLGQM 384

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G++PNV T N L+    +   IE A+D    M  +   PN+RT+  +IKG    S V
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNV 443

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             ++ +L +M +  +  ++  Y  +I   CR    + A RL  +M    L+PD+ TY  +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+ LC++ R+++A D+ + +   G+ P   ++  ++ G C+ GK DE+   LE       
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563

Query: 374 SPH----NALLECCCNAGKFFLAKCILEKMADRKIADCDSWN-IPIRWLCENEEIRKAYE 428
            P+    NAL+   C  GK   A  + EKM    +    S + I I  L ++ +   AY 
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
              +M+ S   PD  TY+ F+   C+     DA  +  ++    +  D  +YS L++G  
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILI-------YG--------LCVMRKV---DK 530
            + +   A +V   M   GC  S  +F  LI       YG        LC M  +   D 
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV-EGCALDVEAYCILI 589
            + L         +    +Y K++LG+ ++   +    V   M   EG +     +  L+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
               +  K  + A   + M+  G +P  E+   L+ GL    +    +S    L+     
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            D   + I+I+G+ K+GL      L ++M   G    + T+ LL+
Sbjct: 864 EDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/492 (20%), Positives = 200/492 (40%), Gaps = 63/492 (12%)

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVN 148
           ++      TY ++I K     NV +  G+   M++ +  P+V     SL+         +
Sbjct: 422 RKLSPNTRTYNELI-KGYCKSNVHKAMGVLNKMLERKVLPDVV-TYNSLIDGQCRSGNFD 479

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            A R+L  MN  G       +  ++ ++ + KR   +   ++  + + G+ PNV     L
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR-VEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++   +  +++ A     +M  K C PNS TF  +I GL A+ ++ ++  +  +M  +G+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           Q  +S  T +I  L ++   + A   F+ M +    PD  TY   I   C   RL DA D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGK------------------------------- 357
           ++  M   G++P    +  +++G  ++G+                               
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718

Query: 358 ----------------------FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
                                 FD  V  LE    +  +P    +  L+   C  G   +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778

Query: 392 AKCILEKMA-DRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           A+ + + M  +  I+  +  +N  +   C+ ++  +A +++  M+    +P   +    +
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G  K    E    VF+ +       D +++  +++G+ +   +    E+F  M KNGC 
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898

Query: 510 LSSSSFNILIYG 521
            SS ++++LI G
Sbjct: 899 FSSQTYSLLIEG 910


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 146/619 (23%), Positives = 288/619 (46%), Gaps = 13/619 (2%)

Query: 81  KIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS 140
           ++F   S   RF H      + +L  G  G        C   V++ +  VR     +  +
Sbjct: 3   RLFAISSTGNRFVH------RSLLGKGKCGTAPPSFSHCSFWVRD-FSGVRYDYRKISIN 55

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
            +N  +++ A+ +  +M       S+  F+ +L AI +  + F   + + ++M   GI  
Sbjct: 56  RLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISH 114

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N+ T + L+      +++  AL    +M K G  P+  T   ++ G    +R+ D+VS++
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
           G+M ++G Q +   +  +I  L R N+  EA+ L   M      PD +TY  ++N LC+ 
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
             +D A  +L+ M    + P   ++  I+  LC     ++++N   +       P    +
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N+L+ C CN G++  A  +L  M +RKI  +  +++  I    +  ++ +A +L   M+ 
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            S+ PD  TYS+ + G C     ++A  +F  + ++    + ++Y+ L++G C+ +++ E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
            +E+F  MS+ G   ++ ++  LI+G    R+ D A  +     S G      TY+ ++ 
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL    + +  LVV   +       D+  Y I+I+ M +  K++D    F  +   G+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  +++ G           +   ++  +  + DS  YN LI    ++G  + ++ L+
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594

Query: 676 DLMLGKGWVPDATTHGLLV 694
             M    +V DA+T GL+ 
Sbjct: 595 REMRSCRFVGDASTIGLVT 613



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 261/561 (46%), Gaps = 25/561 (4%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V ++ +MVK+   P++   + LL  + + N+ +  +    +M   G   N  T+ I+I
Sbjct: 64  DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                 S++  ++++L +M  LG + ++     ++   C  N++ +A+ L   M  +   
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD  T+  LI+ L  + R  +A  +++ M+V G  P    +  +V GLC+ G  D +++ 
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L+        P    +N +++  CN      A  +  +M ++ I  +  ++N  IR LC 
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
                 A  LL  M+   + P+  T+SA +    K     +A +++ ++  +S+  D  +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L+ G C  +++ EA  +F  M    C  +  ++N LI G C  ++VD+ + L     
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G    T TYT ++ G  + +   +  +V  QM+ +G   D+  Y IL+  +    K++
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDSSMY 655
              + F  + ++ + PD  T   ++ G+    ++     L  S   K V  + V     Y
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV----TY 539

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-----------EIDS 704
             +++G  ++GL  +A  L   M  +G +PD+ T+  L+ + + +           E+ S
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599

Query: 705 RRFAFDSSSFPDSVSDILAEG 725
            RF  D+S+    V+++L +G
Sbjct: 600 CRFVGDASTI-GLVTNMLHDG 619



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 223/499 (44%), Gaps = 6/499 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A+ VL  M   G++  +   N +L       R  +D V +  +MV+ 
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR-ISDAVSLVGQMVEM 180

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+  T N L+  LF  NR   A+    RM  KGC P+  T+ IV+ GL     +D +
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +S+L +M    I+  +  Y  II  LC    + +A+ LF  M    + P+ +TY  LI C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC   R  DA+ +L DMI   + P    F  ++    + GK  E+    ++       P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
              +++L+   C   +   AK + E M  +    +  ++N  I+  C+ + + +  EL  
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    +V +  TY+  + G  +    ++A  VF+Q+ +  ++ D ++YS L++GLC   
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+  A+ VF  + ++       ++NI+I G+C   KV+    L       G      TYT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +M G  +    ++   +  +M  EG   D   Y  LI++          A     M   
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600

Query: 612 GLVPDRETMLSLLHGLADG 630
             V D  T+  + + L DG
Sbjct: 601 RFVGDASTIGLVTNMLHDG 619



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 175/422 (41%), Gaps = 13/422 (3%)

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN-- 377
           +L+LDDA ++  DM+     P+   F  ++  + ++ KFD  ++  E       S HN  
Sbjct: 59  DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLY 117

Query: 378 ---ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM 433
               L+ C C   +  LA  +L KM       D  + N  +   C    I  A  L+G+M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           V     PD  T++  + G  +     +A+ +  ++  +    D ++Y  +V GLC+   I
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A+ +   M +         +N +I  LC  + V+ A+ L +   + G      TY  +
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +  L    R  D   +L+ M+      +V  +  LI +  ++ KL +    ++ M+K  +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD  T  SL++G     +L         ++S     +   YN LI G  K     +   
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417

Query: 674 LLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS----SSFPDSVS-DILAEGLG 727
           L   M  +G V +  T+  L+ G     E D+ +  F         PD ++  IL +GL 
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477

Query: 728 NT 729
           N 
Sbjct: 478 NN 479


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 247/577 (42%), Gaps = 87/577 (15%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE----KRGFADFVFVYKEMVKAGIVPNV 202
           V  A+ +L   N  GF  +V  +N VL A++       R + D   V+++MV+ G+ PNV
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNV 207

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T N ++  +     +E  L   R+M K+G  PN  T+  +I       +V +++++L  
Sbjct: 208 YTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRA 267

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G+   L  Y  +I  LC + ++ E   L + MR   L+PDE+TY  L+N  C+   
Sbjct: 268 MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGN 327

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
           L     +L +M+  GL+P                          +   Y T     L+ C
Sbjct: 328 LHQGLVLLSEMVGKGLSP--------------------------NVVTYTT-----LINC 356

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C AG    A  I ++M  R +   + ++   I   C+   + +AY++L  M+VS   P 
Sbjct: 357 MCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPS 416

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TY+A V G C L   ++A+ + R +  + L  D +SYS ++ G C+  ++ +A ++  
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKE 476

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G    + +++ LI GLC+ +K+ +A  L       G      TYT +        
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSL-------- 528

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
                               + AYC+         +L       + MV+ G +PD  T  
Sbjct: 529 --------------------INAYCV-------DGELSKALRLHDEMVQRGFLPDNVTYS 561

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI---------------NGLWKEG 666
            L++GL   ++  +    + KL  +  V D   YN LI                G   +G
Sbjct: 562 VLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKG 621

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEI 702
           L ++A  +   ML +   P+A  + L++ G S G  +
Sbjct: 622 LMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNV 658



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/526 (23%), Positives = 220/526 (41%), Gaps = 54/526 (10%)

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           A F  V K + + G VP   TL +L                    ++ G  P   ++  V
Sbjct: 133 AVFDLVVKSLSRLGFVPKALTLLHL-------------------ANRHGFAPTVLSYNAV 173

Query: 244 IKGLI----ANSR-VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           +  L+    +N R  DD+  +  +M   G+   +  Y  II  +  +  LE+ +   + M
Sbjct: 174 LDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM 233

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               + P+ +TY  LI+  C+  ++ +A  +L  M V G+      +  ++ GLC  G+ 
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRM 293

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
            E    +E+  G    P                              D  ++N  +   C
Sbjct: 294 SEVGELVEEMRGKGLVP------------------------------DEVTYNTLVNGFC 323

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +   + +   LL  MV   + P+  TY+  +   CK  N   A+ +F Q+  + L  +  
Sbjct: 324 KEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNER 383

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ L++G CQ   + EA +V   M  +G S S  ++N L++G C + +V +A+ +    
Sbjct: 384 TYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM 443

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G      +Y+ ++ G  + +       +  +M+ +G   D   Y  LIQ +  Q KL
Sbjct: 444 VERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKL 503

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            +    F  M++ GL PD  T  SL++      +L       +++V    + D+  Y++L
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVL 563

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS 704
           INGL K+  T  A  LL  +  +  VPD  T+  L+ +    E  S
Sbjct: 564 INGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKS 609


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 265/597 (44%), Gaps = 67/597 (11%)

Query: 139 FSFVNHYRVNGAM---RVLVNMNSGGF-----------------------KLSVDVFNVV 172
           F F NH+ +  +    +  +  N+GGF                       + SV  F   
Sbjct: 39  FLFFNHHHITTSTCTKKRSLPQNNGGFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRF 98

Query: 173 LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
           LG+I ++K+ ++  V +  +M   G+  NV +LN L+  L   N +  A+    +M K G
Sbjct: 99  LGSIAKKKQ-YSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLG 157

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P++ TF  +I G      + ++V +  EM   G Q ++  Y+ +I  LC+      A+
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           +L + M      P+ + Y  +I+ LC++  ++DA D+L +M+  G+ P    +  I+ G 
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277

Query: 353 CEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           C +G  +E+     +  G    P+      L++  C  G    A+C+ E M  +    + 
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNA 337

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N  +   C N ++ +A ++L  MV     P   +Y+  + G CK    ++A  +  +
Sbjct: 338 YTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE 397

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +S + L  D+++YS L++GLCQV +  EA+ +F  M  +G      +++ L+ GLC    
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D+A++L                      L  +Q +K                D+  Y I
Sbjct: 458 LDEALKL----------------------LKSMQESK-------------IEPDIVLYNI 482

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI+ M    KL+     F+ +   G+ P   T   ++ GL              K+  D 
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS 704
            + +S  YN++I G  +   +S A  L+D M+GK +  D++T  +L+     +EI S
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDEIIS 599



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 232/544 (42%), Gaps = 78/544 (14%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I+ AL  F RM +    P+   F   +  +    +    VS+  +M   G+   +     
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LCR N +  AI +   M  L + PD +T+  LIN  C    + +A  +  +M+  G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
             P    +  ++ GLC+                               +G   +A  +L 
Sbjct: 193 HQPDVISYSTVINGLCK-------------------------------SGNTSMALQLLR 221

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           KM ++    +  ++   I  LC++  +  A +LL  MV   + PD  TYS  + G C L 
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK----------- 505
           +  +A  +F ++  ++++ ++++++ LV+GLC+   ++EA  VF  M+K           
Sbjct: 282 HLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYN 341

Query: 506 ------------------------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
                                    GC+    S+NILI G C  R++D+A  L       
Sbjct: 342 ALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEK 401

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
             +  T TY+ +M GL ++ R ++ L +  +M   G   D+  Y  L+  + +   L + 
Sbjct: 402 ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA 461

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                 M ++ + PD      L+ G+    +L +     +KL +D        Y I+I G
Sbjct: 462 LKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKG 521

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-------GSSVG----EEIDSRRFAFD 710
           L KEGL+ +A  L   M   G++P++ ++ +++        SS      +E+  +RF+ D
Sbjct: 522 LLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSAD 581

Query: 711 SSSF 714
           SS+F
Sbjct: 582 SSTF 585



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 193/417 (46%), Gaps = 9/417 (2%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREA 133
           ++  A+ +F  + +++  Q    +Y  +I  L  +GN      L + M ++   PN+  A
Sbjct: 177 EIKEAVGLFNEM-VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV-A 234

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
             +++ S      VN AM +L  M   G    V  ++ +L           +   ++ EM
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH-LNEATILFNEM 293

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           V   ++PN  T   L++ L +   +  A   F  M KKG  PN+ T+  ++ G   N+++
Sbjct: 294 VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQM 353

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           D++  +L  M D G    +  Y  +I   C+  +L+EA  L   M   +L PD +TY  L
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           +  LC+  R  +A ++ ++M   GL P    +  ++ GLC+ G  DE++  L+       
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            P    +N L+E    AGK  +AK +  K+ AD       ++ I I+ L +     +AYE
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           L  +M     +P+  +Y+  + G  +  +   A+R+  ++  +    DS ++  L++
Sbjct: 534 LFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 203/416 (48%), Gaps = 5/416 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + V+K M + G+ P+V T N L+  L +  R   A   F  M K+G  PNS T+  ++
Sbjct: 291 DAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G      +     +L  M   GIQ +   +  +I    +  K+++A+ LF  MR   L 
Sbjct: 351 HGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLN 410

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +TY  +++ LC   ++DDA      +I  GLTP   VF +++ GLC   K+D++   
Sbjct: 411 PDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEEL 470

Query: 365 LEDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
             +  G    P+N     LL   C  G    AK I + M    +  D  ++N  I   C 
Sbjct: 471 AVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCL 530

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           + ++ +A +LL  MV+  V P+  TY+  + G CK    EDA  +FRQ++++ +    ++
Sbjct: 531 HGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVT 590

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS +++GL Q  +   A E++  M K+G      ++NI++ GLC     D A+R+    Y
Sbjct: 591 YSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLY 650

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                    T+  ++  L+K  R  +   + A +L  G   +V  Y ++++S+ EQ
Sbjct: 651 LIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 706



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 233/582 (40%), Gaps = 46/582 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+      F+ +L A+ ++KR         + M   G  PNV +   LL+ L + NR + 
Sbjct: 121 GWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQ 180

Query: 221 ALDQFRRM-----HKKGCCPNSRTFEIVIKGLIANSR-VDDSVSILGEMFDLGIQLELSF 274
           AL     M      + G  P+  ++  VI GL+   R +D +  +  +M D G+  ++  
Sbjct: 181 ALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVT 240

Query: 275 YTCIIPML-----------------------------------CRENKLEEAIRLFKMMR 299
           Y  II  L                                   C   K  +AI +FK M 
Sbjct: 241 YNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMC 300

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + PD  TY  L+  LC+N R  +A  I + M+  G  P    +  ++ G    G   
Sbjct: 301 RDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLV 360

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           +  + L+        P     N L+      GK   A  +  KM  + +  D  ++ I +
Sbjct: 361 KMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVM 420

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC   ++  A    GR++   + PD   +   + G C    ++ A  +  ++  + + 
Sbjct: 421 DALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC 480

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            ++I ++ L+  LC+   +  A  +F  M +        ++N LI G C+  KVD+A +L
Sbjct: 481 PNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKL 540

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G      TY  ++ G  K  R +D   +  QM  +G    +  Y  ++Q + +
Sbjct: 541 LEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQ 600

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             +       +  M+K+G+  D  T   +L GL   +           L      L++  
Sbjct: 601 ARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRT 660

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +NI+I+ L K G   +A  L   +L +G VP+  T+ L++ S
Sbjct: 661 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 702


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 182/763 (23%), Positives = 317/763 (41%), Gaps = 91/763 (11%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           E  + +L     P+ +I VL    D++ A++ F+W   +    H  ++Y  ++L +    
Sbjct: 53  ENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112

Query: 111 NVEEM---------------------------------EGL--CQNMVKERYPNVREALI 135
           N + +                                 EG    QNM K ++     A  
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYT 172

Query: 136 SLV--FSFVNHY---------------------------------RVNGAMRVLVNMNSG 160
           +L+  FS VNH                                  RV+ A+ +L  M S 
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETNRIE 219
                + ++NV + +    K G  D  + +   ++A G+ P+  T   ++ VL + NR++
Sbjct: 233 SLDADIVLYNVCIDSF--GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A++ F  + K    P +  +  +I G  +  + D++ S+L      G    +  Y CI+
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             L +  K++EA+R+F+ M+  D  P+  TY  LI+ LC   +LD A ++ + M   GL 
Sbjct: 351 TCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLF 409

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAKCI 395
           P       +V  LC+  K DE+    E     V +P      +L++     G+   A  I
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKI 469

Query: 396 LEKMADRKIADCDSWNIPIRWLCEN--EEIRK--AYELLGRMVVSSVVPDCATYSAFVLG 451
            EKM D   +DC + +I    L +N     RK   +++   MV  +  PD    + ++  
Sbjct: 470 YEKMLD---SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDC 526

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K    E    +F ++ ++  V D+ SYS L+ GL +     E  E+F  M + GC L 
Sbjct: 527 MFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           + ++NI+I G C   KV+KA +L     + G   T  TY  ++ GL K+ R  +  ++  
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +   +   L+V  Y  LI    +  ++ +  L    +++ GL P+  T  SLL  L    
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAE 706

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +++        +       +   Y ILINGL K    ++A      M  +G  P   ++ 
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766

Query: 692 LLV-GSSVGEEIDSRRFAFD----SSSFPDSV-SDILAEGLGN 728
            ++ G +    I      FD    +   PDS   + + EGL N
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 138/581 (23%), Positives = 256/581 (44%), Gaps = 17/581 (2%)

Query: 59  HNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + L PD      +I VL   N L  A+++F+ +   +R   T   Y  MI+  G AG  +
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFD 325

Query: 114 EMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           E   L +    K   P+V  A   ++       +V+ A+RV   M       ++  +N++
Sbjct: 326 EAYSLLERQRAKGSIPSVI-AYNCILTCLRKMGKVDEALRVFEEMKKDAAP-NLSTYNIL 383

Query: 173 LGAIVEEKRGFADFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           +  +   + G  D  F  ++ M KAG+ PNV T+N +++ L ++ +++ A   F +M  K
Sbjct: 384 IDMLC--RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYK 441

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
            C P+  TF  +I GL    RVDD+  I  +M D   +     YT +I       + E+ 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
            +++K M   +  PD       ++C+ +    +    + E++      P    +  ++ G
Sbjct: 502 HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHG 561

Query: 352 LCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
           L + G  +E+        E  C   T  +N +++  C  GK   A  +LE+M  +     
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++   I  L + + + +AY L        +  +   YS+ + G  K+   ++A  +  
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++  + L  +  +++ L++ L + E+I EA+  F  M +  C+ +  ++ ILI GLC +R
Sbjct: 682 ELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K +KA          G   +T +YT ++ GL K     +   +  +    G   D   Y 
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +I+ +S  N+  D    F    + GL    +T + LL  L
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 265/570 (46%), Gaps = 32/570 (5%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +MV++  +P+V     L+ V+    R++  +   R+M  +    N+
Sbjct: 54  HEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNA 113

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I++K   + S++  ++S  G++  LG    +  ++ ++  LC E+++ EA+ LF  
Sbjct: 114 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQ 173

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL P    +  IV G+C++G 
Sbjct: 174 M----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229

Query: 358 FDESVNFLED-------KCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKIADC 407
              ++N L         K   V  P      ++   C++G++  A+ +L++M +RK    
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 408 D--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++N  I    +  +  +A EL   M+   ++P   TYS+ + G CK    + A  +F
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
             ++ +    D I+++ L+ G C+ +++ + +++   M++ G   ++ ++  LI+G C +
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML----------- 574
             ++ A  L     SSG      T   ++ GL    + KD L +   M            
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   DV+ Y ILI  +  + K  +    +  M   G+VPD  T  S++HGL   S+L 
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT----- 689
             +   + + S S   +   +  LING  K G       L   M  +G V +A T     
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589

Query: 690 HGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           HG     ++   +D  +    S  +PD+++
Sbjct: 590 HGFRKVGNINGALDIFQEMMASGVYPDTIT 619



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 133/592 (22%), Positives = 258/592 (43%), Gaps = 35/592 (5%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           H I+ L++  DL   +       ++ R   +   +CK++  +   G ++ +  L + M  
Sbjct: 54  HEIKGLEDAIDLFGDM-------VRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEM 106

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
            R P    +   L+  F +  ++  A+     +   GF  +V  F+ +L  +  E R  +
Sbjct: 107 RRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDR-IS 165

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           + + ++ +M K    PNV T   L+  L    R+  A+    RM + G  PN  T+  ++
Sbjct: 166 EALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIV 221

Query: 245 KGLIANSRVDDSVSILGEMFDLG------IQLELSFYTCIIPMLCRENKLEEAIRLFK-M 297
            G+        ++++L +M ++       +   L   TC+I   C   +  EA +L + M
Sbjct: 222 DGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEM 281

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           +    + PD +TY  LIN   +  +  +A ++ ++M+  G+ P+   +  ++ G C+  +
Sbjct: 282 LERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNR 341

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNI 412
            D + +          SP     N L+   C A +      +L +M +   +A+  ++  
Sbjct: 342 LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 401

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I   C+  ++  A +LL  MV S V P+  T +  + G C     +DAL +F+ +    
Sbjct: 402 LIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 461

Query: 473 LVLDSI-----------SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           + +D+            +Y+ L+ GL    K  EA E++  M   G    + ++N +I+G
Sbjct: 462 MDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG 521

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           LC   ++D+A ++     S   S    T+T ++ G  K  R  D L +  +M   G   +
Sbjct: 522 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              Y  LI    +   +      F  M+ +G+ PD  T+ ++L GL    +L
Sbjct: 582 AITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEEL 633



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 120/534 (22%), Positives = 229/534 (42%), Gaps = 35/534 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           L++   + + L  AL  F  ++ +  F  T  T+  ++  L +   + E   L   M K 
Sbjct: 119 LMKCFCSCSKLPFALSTFGKIT-KLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK- 176

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
             PNV     +L+       RV  A+ +L  M   G + +     +  G IV+      D
Sbjct: 177 --PNV-VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPN----QITYGTIVDGMCKMGD 229

Query: 186 FVFVYKEMVK----AGIVPNV-----DTLNYLLEVLFETNRIESALDQFRRM-HKKGCCP 235
            V     + K    + I PNV     +    ++     + R   A    + M  +K   P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           +  T+  +I   +   +  ++  +  EM   GI      Y+ +I   C++N+L+ A  +F
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
            +M      PD +T+  LI   C   R+DD   +L +M   GL      +  ++ G C+V
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 356 GKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI------- 404
           G  + + + L++       P+    N LL+  C+ GK   A  + + M   K+       
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469

Query: 405 -----ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                 D  ++NI I  L    +  +A EL   M    +VPD  TY++ + G CK    +
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A ++F  + ++S   + ++++ L+ G C+  ++ + +E+FC M + G   ++ ++  LI
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +G   +  ++ A+ +     +SG    T T   ++ GL   +  K  + +L  +
Sbjct: 590 HGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 150/628 (23%), Positives = 287/628 (45%), Gaps = 26/628 (4%)

Query: 82  IFKWVSIQKRFQHTADTYCKMILK-LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS 140
           +F   S+ ++F     T C ++L  L   G + + E + Q M   R PN      +++  
Sbjct: 216 LFLKESLDRKFPLDVTT-CNIVLNSLCTQGKLSKAESMLQKMKNCRLPNA-VTYNTILNW 273

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
           +V   R   A+R+L +M   G +  +  +N+++  + + KR    ++ + K M +  + P
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL-KRMREVNLTP 332

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +  + N L+   F   +I  A+  F +M ++   P+  T+  +I G   N R D++  +L
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM   G++     Y+ ++   C+ +KL  A+ L K +R+  +  +   Y  LI+  C+ 
Sbjct: 393 YEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQL 452

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
             +  A  IL+ M+  G+ P    +  ++ G+C++G   E+   L         P+N L 
Sbjct: 453 GEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLY 512

Query: 381 ECC----CNAG------KFFLAKCILEKMADRKIAD---CDSWNIPIRWLCENEEIRKAY 427
                  C AG      K+F+       +A+  I +   C  +   +  + E E+ +   
Sbjct: 513 TTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM--IAEAEQFK--- 567

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           + + RM +S    D A+++  +   C+  N  +A  V+  +       D  +Y  L+ GL
Sbjct: 568 QYMSRMKISF---DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 624

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           CQ   + +A E    + +  C++   + N L+ G+C    +D+A+ L     +      T
Sbjct: 625 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 684

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN- 606
            TYT ++ G  K  +    L++L  ML +G   D  AY  L+  +  + ++K  +  F  
Sbjct: 685 YTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQE 744

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           ++ K GL  D     S+++G   G Q++ +   +  +  +     S+ YNIL++G  K+G
Sbjct: 745 IICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG 804

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
             S+  YL   M+ +G  PD  T+ LL+
Sbjct: 805 QLSRTLYLYRDMVKEGIKPDNVTYRLLI 832



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/582 (24%), Positives = 263/582 (45%), Gaps = 12/582 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY-KEMVK 195
           LV ++V   +V  A   +  M+  GFK S+   N +L A+V   +  +++V+++ KE + 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINK--SEYVWLFLKESLD 223

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVD 254
                +V T N +L  L    ++  A    ++M  K C  PN+ T+  ++   +   R  
Sbjct: 224 RKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCK 281

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ IL +M   GI+ +L  Y  +I  LC+  +   A  L K MR ++L PDE +Y  LI
Sbjct: 282 SALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLI 341

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +      +++ A  I   M+   L P+   +  ++ G C  G+ DE+   L +       
Sbjct: 342 HGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVR 401

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL 429
           P    ++ALL   C   K   A  +++ +  R I+ +   + I I   C+  E+ KA ++
Sbjct: 402 PSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQI 461

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M+   + PD  TYSA + G CK+    +   +  ++    ++ +++ Y+ LV   C+
Sbjct: 462 LKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCK 521

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
                EA++ F  + ++G   +S   N L+        + +A + +        S+  ++
Sbjct: 522 AGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVAS 581

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           +  I+    +     +   V   M+  G   D+  Y  L++ + +   L     F   ++
Sbjct: 582 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 641

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           +     D +T+ +LL G+     L        K+V+ + + D+  Y IL++G  K G   
Sbjct: 642 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 701

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFD 710
            A  LL +ML KG VPD   +  L+   V E ++ +  + F 
Sbjct: 702 PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQ 743



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 149/708 (21%), Positives = 292/708 (41%), Gaps = 82/708 (11%)

Query: 60   NLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
            NL+PD      LI        ++ A+ IF  + +++  + +  TY  +I      G  +E
Sbjct: 329  NLTPDECSYNTLIHGFFGEGKINLAIYIFNQM-LRQSLKPSVATYTALIDGYCRNGRTDE 387

Query: 115  MEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
               +   M   +   VR + ++   L+  +  H ++  A+ ++  + S    ++  ++ +
Sbjct: 388  ARRVLYEM---QITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTI 444

Query: 172  V------LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
            +      LG + + K+       + K M+  GI P+V T + L+  + +   I    +  
Sbjct: 445  LIDGFCQLGEVSKAKQ-------ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 497

Query: 226  RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             RM K G  PN+  +  ++          +++    +++  G+      +  ++    RE
Sbjct: 498  SRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYRE 557

Query: 286  NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
              + EA +  + M  + +  D  ++  +I+  C+   + +A  + ++M+  G  P    +
Sbjct: 558  GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 617

Query: 346  VDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              ++RGLC+ G   ++  F    LE  C       N LL   C  G    A  + EKM  
Sbjct: 618  GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677

Query: 402  RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
            R I  D  ++ I +   C+  ++  A  LL  M+   +VPD   Y+  + G       + 
Sbjct: 678  RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 737

Query: 461  ALRVFRQV-SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A  +F+++   + L  D I+Y+ ++ G  +  +I E   +   M +N    SS+S+NIL+
Sbjct: 738  ASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 797

Query: 520  YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            +G     ++ + + L       G      TY  ++ GL +    +  +  L +M++EG  
Sbjct: 798  HGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVF 857

Query: 580  LDVEAYCILIQSMSEQNKLKDCALFFNVM------------------------------- 608
             D  A+ ILI++ SE++K+ +    F+ M                               
Sbjct: 858  PDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSI 917

Query: 609  --------------------VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
                                ++AG+VP   T  +L+HGL    ++         + S   
Sbjct: 918  VRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGL 977

Query: 649  VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             +D   YN+LI GL  +     A  L + M  KG +P+ TT+  L G+
Sbjct: 978  KVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGA 1025



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 211/485 (43%), Gaps = 25/485 (5%)

Query: 163  KLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            K+S DV  FN ++ +  +       F  VY  MV+ G  P++ T   LL  L +   +  
Sbjct: 574  KISFDVASFNCIIDSYCQRGNVLEAFS-VYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 632

Query: 221  ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
            A +    + +K C  + +T   ++ G+  +  +D+++ +  +M    I  +   YT ++ 
Sbjct: 633  AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 692

Query: 281  MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI-GLT 339
              C+  K+  A+ L +MM    L+PD + Y  L+N L    ++  A+ + +++I   GL 
Sbjct: 693  GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 752

Query: 340  PTDDVFVDIVRGLCEVGKFDE----SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
                 +  ++ G  + G+ +E      N  E++    ++ +N L+      G+      +
Sbjct: 753  ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 812

Query: 396  LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
               M    I  D  ++ + I  LCE   I  A + L +MV+  V PD   +   +    +
Sbjct: 813  YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 872

Query: 455  LCNYEDALRVF----------------RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
                 +AL++F                  + A  +V   ++ S +V GLC+  K+ EA+ 
Sbjct: 873  KSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 932

Query: 499  VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
            VF  + + G   + ++F  L++GLC   K+D A  L+ L  S G      TY  ++ GL 
Sbjct: 933  VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 992

Query: 559  KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
              +   D L +  +M  +G   ++  Y  L  +M     ++D       +   G+VP  +
Sbjct: 993  NKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYK 1052

Query: 619  TMLSL 623
               SL
Sbjct: 1053 HPESL 1057



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/448 (22%), Positives = 186/448 (41%), Gaps = 35/448 (7%)

Query: 57   LRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
            +RH   PD      L+R L     L  A K F    ++K       T   +++ +   G 
Sbjct: 606  VRHGWPPDICTYGSLLRGLCQGGHLVQA-KEFMVYLLEKACAIDEKTLNTLLVGICKHGT 664

Query: 112  VEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
            ++E   LC+ MV     P+     I L+  F    +V  A+ +L  M   G       + 
Sbjct: 665  LDEALDLCEKMVTRNILPDTYTYTI-LLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYT 723

Query: 171  VVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             +L  +V E +  A   ++++E++ K G+  +    N ++    +  +I       R MH
Sbjct: 724  CLLNGLVNEGQVKAA-SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMH 782

Query: 230  KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
            +    P+S ++ I++ G I   ++  ++ +  +M   GI+ +   Y  +I  LC    +E
Sbjct: 783  ENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIE 842

Query: 290  EAIRLFKMMRALDLMPDELTYEELINCLCENLRL----------------DDANDILEDM 333
             A++  + M    + PD L ++ LI    E  ++                D A ++ EDM
Sbjct: 843  IAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDM 902

Query: 334  IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKF 389
              +G+ P++     IVRGLC+ GK +E++       + G V +      L+   C   K 
Sbjct: 903  KALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 962

Query: 390  ---FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               F  K ++E    +   D  ++N+ I  LC  + I  A +L   M    ++P+  TY 
Sbjct: 963  DDAFHLKQLMESCGLK--VDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 1020

Query: 447  AFVLGKCKLCNYEDALRVFRQVSAQSLV 474
                        +D  ++ + +  + +V
Sbjct: 1021 TLTGAMYATGTMQDGEKLLKDIEDRGIV 1048



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 19/249 (7%)

Query: 110  GNVEEMEGLCQNMVKE--RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
            G +     L ++MVKE  +  NV   L  L+F    +  +  A++ L  M   G      
Sbjct: 804  GQLSRTLYLYRDMVKEGIKPDNVTYRL--LIFGLCEYGLIEIAVKFLEKMVLEGVFPDNL 861

Query: 168  VFNVVLGAIVEEKR--------------GFADFVFVYKEMVKA-GIVPNVDTLNYLLEVL 212
             F++++ A  E+ +              G  D  F  KE +KA G+VP+    + ++  L
Sbjct: 862  AFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGL 921

Query: 213  FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
             +  ++E A+  F  + + G  P   TF  ++ GL    ++DD+  +   M   G+++++
Sbjct: 922  CKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDV 981

Query: 273  SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
              Y  +I  LC +  + +A+ L++ M++  L+P+  TY  L   +     + D   +L+D
Sbjct: 982  VTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKD 1041

Query: 333  MIVIGLTPT 341
            +   G+ P+
Sbjct: 1042 IEDRGIVPS 1050


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 268/567 (47%), Gaps = 17/567 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           ++V  +    R+  A R++  M    F      FN ++ A+    R   D + V+ +M+ 
Sbjct: 224 TMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGR-IPDALAVFDDMLH 279

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P+V T + LL+   + +    A+     M  KGC P+  T+ ++I  +     VD+
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +++IL  +   G + +   YT ++  LC   + +E   L   M + +  PDE+T+  ++ 
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+   +D A ++++ M   G       +  I+ GLC+VG+ D++V  L     Y   P
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAY 427
               +  +L+  C+  ++  A+   E MA+   +DC     ++N  +  LC+   + +A 
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAE---ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            ++ +M  +   PD  TY+  + G C     +DA+ +   + +     D ++++ L++GL
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C V++  +A ++   M ++ C     +FN +I  LC    + +AI    +   +G    +
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
           STY+ ++  L+K  +A+  L +L+ M   G   D+  Y  +I ++++  K+++      V
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGM-TNGTP-DLITYNTVISNLTKAGKMEEALDLLRV 694

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV  GL PD  T  SL +G+            + ++       D++ YN ++ G  ++  
Sbjct: 695 MVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRR 754

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
           T  A      M+  G +PD +T+ +L+
Sbjct: 755 TDLAIDCFAHMVSSGCMPDESTYVILL 781



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 253/564 (44%), Gaps = 28/564 (4%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVF--NVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           S V    ++ A+ +  +M SGG +    V   N+++      KR  +D      E V A 
Sbjct: 159 SLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILI------KRLCSDGRVSDAERVFAA 212

Query: 198 IVPN--VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           + P+  V T N ++       RIE   D  R ++     P++ TF  +I+ L    R+ D
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIE---DARRLINGMPFPPDTFTFNPLIRALCVRGRIPD 269

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++++  +M   G    +  Y+ ++   C+E+   +A+ L   MRA    PD +TY  LIN
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            +C    +D+A +IL ++   G  P    +  +++ LC   ++ E    L +      +P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389

Query: 376 H----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
                N ++   C  G    A  +++ M++   +AD  +++  +  LC+   +  A ELL
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            R+      PD   Y+  + G C    +E A  +  ++       D ++++ +V  LCQ 
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             +  A+ V   MS+NGCS    ++N +I GLC    +D A+ L S   S G      T+
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTF 569

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ GL  + R +D   ++A M+   C  D   +  +I S+ ++  L        +M +
Sbjct: 570 NTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAE 629

Query: 611 AGLVPDRET----MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            G VP+  T    + +LL      + L L+S   N         D   YN +I+ L K G
Sbjct: 630 NGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG------TPDLITYNTVISNLTKAG 683

Query: 667 LTSQASYLLDLMLGKGWVPDATTH 690
              +A  LL +M+  G  PD TT+
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTY 707



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 146/615 (23%), Positives = 269/615 (43%), Gaps = 15/615 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI+ L +   +S A ++F  +        T  TY  M+     AG +E+   L   M   
Sbjct: 193 LIKRLCSDGRVSDAERVFAALGPSA----TVVTYNTMVNGYCRAGRIEDARRLINGMP-- 246

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            +P        L+ +     R+  A+ V  +M   G   SV  ++++L A  +E  G+  
Sbjct: 247 -FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKES-GYRQ 304

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + +  EM   G  P++ T N L+  +     ++ AL+    +   GC P++ T+  V+K
Sbjct: 305 AMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L  + R  +   +L EM       +   +  I+  LC++  ++ AI +   M     + 
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA 424

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +TY  +++ LC+  R+DDA ++L  +   G  P    +  +++GLC   +++ +   +
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELM 484

Query: 366 ED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
            +     C       N ++   C  G    A  ++E+M++   + D  ++N  I  LC  
Sbjct: 485 AEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNE 544

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             I  A ELL  +      PD  T++  + G C +  +EDA ++   +   +   D +++
Sbjct: 545 SCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTF 604

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++  LCQ   +T+A+E    M++NGC  +SS+++I++  L    K   A+ L S   +
Sbjct: 605 NTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS-GMT 663

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           +GT     TY  ++  L K  + ++ L +L  M+  G   D   Y  L   +  ++    
Sbjct: 664 NGTPDLI-TYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDR 722

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                  +   GL PD      +L G     +  L       +VS   + D S Y IL+ 
Sbjct: 723 AVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLE 782

Query: 661 GLWKEGLTSQASYLL 675
            L   GL  +A  LL
Sbjct: 783 ALAYGGLLDEAKRLL 797



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 5/234 (2%)

Query: 107 GLAG--NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
           GL G    E+ E L  NM++   P       +++ S      +  A+  L  M   G   
Sbjct: 575 GLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVP 634

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +   +++V+ A++  K G A         +  G  P++ T N ++  L +  ++E ALD 
Sbjct: 635 NSSTYSIVVDALL--KAGKAQAALELLSGMTNG-TPDLITYNTVISNLTKAGKMEEALDL 691

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            R M   G CP++ T+  +  G+      D +V +L  + D G+  + +FY  ++   CR
Sbjct: 692 LRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCR 751

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           + + + AI  F  M +   MPDE TY  L+  L     LD+A  +L  +  +G+
Sbjct: 752 DRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 76/176 (43%), Gaps = 3/176 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           +V + +   +   A+ +L  M +G   L    +N V+  + +  +   + + + + MV  
Sbjct: 642 VVDALLKAGKAQAALELLSGMTNGTPDLIT--YNTVISNLTKAGK-MEEALDLLRVMVSN 698

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ P+  T   L   +   +  + A+   RR+   G  P++  +  V+ G   + R D +
Sbjct: 699 GLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLA 758

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +     M   G   + S Y  ++  L     L+EA RL   + +L ++  +L  EE
Sbjct: 759 IDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKLIEEE 814


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 267/581 (45%), Gaps = 15/581 (2%)

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
            R P V + L+    ++    RV  A  V++ M   G   S+   N +L  ++      A
Sbjct: 44  HRSPAVLDVLVD---TYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRAD-AMA 99

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
               V + MV AGI P+V T + L+E   +    ++A      M ++GC  N+ T+ ++I
Sbjct: 100 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 159

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GL  +  V+++     +M D G+  +   Y  +I  LC+  +  EA  L   M   +L 
Sbjct: 160 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ + Y  LI+        D+A  ++++M+  G+ P    + ++VRGLC++G+ D +   
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
           L+        P    +N ++E          A  +L +M +  I+ +  +++I I  LC+
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           + E  KA +LL  M    + P+   Y+  + G C+  N   A  +F +++  +++ D   
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ GL +V ++ E+ + F  M + G   +  +++ LI+G      ++ A +L     
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            +G       Y  ++    K    + +      ML +G  LD   Y ILI ++S    ++
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGL---ADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
                 + + K G VPD     SL+ GL   AD  +   +   ++K   D  ++    YN
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV---CYN 576

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
            LI+GL K G  S A  + + +L KG VP+  T+  L+  S
Sbjct: 577 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 148/600 (24%), Positives = 250/600 (41%), Gaps = 48/600 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI--SLVFSFVNHYRVNGAMRVLV 155
           TY  +I  L  +G VEE  G  ++M  E Y  V +     +L+       R N A  +L 
Sbjct: 154 TYNVLIAGLCRSGAVEEAFGFKKDM--EDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 211

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFE 214
            M+    K +V V+  ++   + E  G AD  F + KEMV AG+ PN  T + L+  L +
Sbjct: 212 EMSCAELKPNVVVYANLIDGFMRE--GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             +++ A    ++M +    P++ T+ ++I+G   +    D+  +L EM + GI   +  
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y+ +I  LC+  + E+A  L + M    L P+   Y  LI+  C    +  A +I + M 
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            + + P    +  ++ GL +VG+ +ES  +          P    ++ L+      G   
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449

Query: 391 LAKCILEKMADRKIADCDSWNIPI-RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A+ ++++M D  +   D   I +     ++++I K       M+   V+ D   Y   +
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
                  N E A RV  ++     V D   YS L+ GLC+     +A  +   MSK G  
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 569

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            +   +N LI GLC                S   SY  + +  I                
Sbjct: 570 PNIVCYNALIDGLC---------------KSGDISYARNVFNSI---------------- 598

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           LA+ LV  C      Y  LI    +   + +    +N M+  G+ PD      L  G + 
Sbjct: 599 LAKGLVPNCV----TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 654

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              L      I ++        SS +N L++G  K G   +   LL +++G+G VP+A T
Sbjct: 655 AGDLEQAMFLIEEMFLRGHASISS-FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 713



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 192/450 (42%), Gaps = 47/450 (10%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM  AGI PNV T + ++  L ++   E A D    M  KG  PN+  +  +I G     
Sbjct: 317 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 376

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V  +  I  +M  + +  +L  Y  +I  L +  ++EE+ + F  M+   L+P+E TY 
Sbjct: 377 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 436

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI----------------------- 348
            LI+   +N  L+ A  +++ M+  GL P D +++D+                       
Sbjct: 437 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 496

Query: 349 ------------VRGLCEVGKFDESVNFLED--KCGYVTSPH--NALLECCCNAGKFFLA 392
                       +  L   G  + +   L +  K G V   H  ++L+   C       A
Sbjct: 497 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKA 556

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             IL++M+ + +  +   +N  I  LC++ +I  A  +   ++   +VP+C TY++ + G
Sbjct: 557 FGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 616

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK+ +  +A  ++ ++ A  +  D+  YS L  G      + +A+ +   M   G + S
Sbjct: 617 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-S 675

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLV 568
            SSFN L+ G C   K+ + ++L  +    G      T   I+ GL    KL     + V
Sbjct: 676 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 735

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            L Q   E  A     +  L   M  Q K+
Sbjct: 736 ELQQKTSESAA---RHFSSLFMDMINQGKI 762



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/374 (20%), Positives = 153/374 (40%), Gaps = 57/374 (15%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + M+  G+ PN      LLE  F+++ IE     F+ M  +G   ++R + I+I  L ++
Sbjct: 456 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             ++ +  +L E+   G   ++  Y+ +I  LC+    E+A  +   M    + P+ + Y
Sbjct: 516 GNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 575

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+ LC++  +  A ++   ++  GL P    +  ++ G C+VG    +     +   
Sbjct: 576 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 635

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
              +P    ++ L   C +AG    A  ++E+M  R  A   S+N  +   C+  ++++ 
Sbjct: 636 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQET 695

Query: 427 YELLGRMVVSSVVPDCATYSAFVLG----------------------------------- 451
            +LL  ++   +VP+  T    + G                                   
Sbjct: 696 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 755

Query: 452 ------------------KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                              CK  N + AL +   + A+S  +   SY  +V+ LC+  K+
Sbjct: 756 MINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 815

Query: 494 TEAVEVFCCMSKNG 507
           +EA+ +   M K G
Sbjct: 816 SEALNLLKEMDKRG 829



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 27/238 (11%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  ++  G+VPN  T   L++   +   I +A   +  M   G  P++  + ++  G  
Sbjct: 594 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 653

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           +   ++ ++ ++ EMF  G    +S +  ++   C+  K++E ++L  ++    L+P+ L
Sbjct: 654 SAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712

Query: 309 TYEELINCLCENLRLDDANDI-------------------LEDMIVIGLTPTDDVFVDIV 349
           T E +I+ L E  +L + + I                     DMI  G  P  DV  D++
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL-DVVDDMI 771

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPHN-----ALLECCCNAGKFFLAKCILEKMADR 402
           R  C+ G  D+++  L D     ++P       A+++  C  GK   A  +L++M  R
Sbjct: 772 RDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 221/447 (49%), Gaps = 6/447 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + +++EMVK    P++   N LL  + +  + +  +   ++M   G   +  TF IVI
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +V  ++S+LG+M  LG + +      ++   CR N++ +A+ L   M  +   
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD + Y  +I+ LC+  R++DA D  +++   G+ P    +  +V GLC  G+++++   
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L D      +P    ++ALL+     GK   AK I E+M    I  D  +++  I  LC 
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           ++ I +A ++   MV     PD  +Y+  + G CK    ED +++FR++S + LV ++++
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G  QV  + +A E F  M   G S    ++NIL+ GLC    ++KA+ +     
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            S       TYT ++ G+ K  + +D   +   + ++G   D+  Y  ++  +  +    
Sbjct: 428 KSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQH 487

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHG 626
           +    +  M + GL+ + ++ML L  G
Sbjct: 488 EVEALYTKMKQEGLMKN-DSMLCLGDG 513



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 182/383 (47%), Gaps = 39/383 (10%)

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMVKAGIVPN 201
           ++V+ A+ VL  M     KL  +   V +G++V     +   +D V +  +MV+ G  P+
Sbjct: 134 FQVSLALSVLGKM----LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPD 189

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           +   N +++ L +T R+  ALD F+ + +KG  PN  T+  ++ GL  + R +D+  +L 
Sbjct: 190 IVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLR 249

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +M    I   +  Y+ ++    +  K+ EA  +F+ M  + + PD +TY  LIN LC + 
Sbjct: 250 DMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHD 309

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           R+D+AN + + M+  G  P    +  ++ G C+  + ++ +                   
Sbjct: 310 RIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMK------------------ 351

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                        +  KM+ R + +   ++N  I+   +  ++ KA E   +M    V P
Sbjct: 352 -------------LFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  TY+  + G C     E AL +F  +    + LD ++Y+ +++G+C+  K+ +A  +F
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458

Query: 501 CCMSKNGCSLSSSSFNILIYGLC 523
           C +S  G      ++  ++ GLC
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 174/386 (45%), Gaps = 31/386 (8%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M+K  Y   R  + SLV  F    RV+ A+ ++  M   G++  +  +N ++ ++ + +R
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRR 205

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
              D +  +KE+ + GI PNV T   L+  L  + R   A    R M K+   PN  T+ 
Sbjct: 206 -VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYS 264

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            ++   + N +V ++  I  EM  + I  ++  Y+ +I  LC  ++++EA ++F +M + 
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              PD ++Y  LIN  C+  R++D   +   M   GL      +  +++G  +VG  D++
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
             F      +  SP                              D  ++NI +  LC+N 
Sbjct: 385 QEFFSQMDSFGVSP------------------------------DIWTYNILLGGLCDNG 414

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + KA  +   M  S +  D  TY+  + G CK    EDA  +F  +S + L  D ++Y+
Sbjct: 415 LLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYT 474

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNG 507
            ++ GLC      E   ++  M + G
Sbjct: 475 TMMSGLCTKGLQHEVEALYTKMKQEG 500



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 129/291 (44%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++NI I   C   ++  A  +LG+M+     PD  T  + V G C+     DA+ + 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++       D ++Y+ +++ LC+  ++ +A++ F  + + G   +  ++  L+ GLC  
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            + + A RL         +    TY+ ++   VK  +  +   +  +M+      D+  Y
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI  +   +++ +    F++MV  G  PD  +  +L++G     ++        K+  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              V ++  YN LI G ++ G   +A      M   G  PD  T+ +L+G 
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 6/257 (2%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++   LV G C+  ++++AV +   M + G      ++N +I  LC  R+V+ A+   
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFF 213

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TYT ++ GL    R  D   +L  M+      +V  Y  L+ +  + 
Sbjct: 214 KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKN 273

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+ +    F  MV+  + PD  T  SL++GL    ++   +   + +VS     D   Y
Sbjct: 274 GKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSY 333

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSS 713
           N LING  K         L   M  +G V +  T+  L+     VG+   ++ F     S
Sbjct: 334 NTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDS 393

Query: 714 F---PDSVS-DILAEGL 726
           F   PD  + +IL  GL
Sbjct: 394 FGVSPDIWTYNILLGGL 410



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 110/273 (40%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++  A  L   MV +   P    ++  +    K+  Y+  + + +++    +  D  +++
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++   C   +++ A+ V   M K G      +   L+ G C   +V  A+ L       
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  I+  L K +R  D L    ++  +G   +V  Y  L+  +    +  D 
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           A     M+K  + P+  T  +LL       ++        ++V  S   D   Y+ LING
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L       +A+ + DLM+ KG  PD  ++  L+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLI 337


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 151/612 (24%), Positives = 263/612 (42%), Gaps = 46/612 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V + LI +   ++    +  ++ +   M   GF  SV   N +LG++V+     + + 
Sbjct: 123 PSVYDILIRV---YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           F+ KEM+K  I P+V T N L+ VL      E +    ++M K G  P   T+  V+   
Sbjct: 180 FL-KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R   ++ +L  M   G+  ++  Y  +I  LCR N++ +   L + MR   + P+E
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN--FL 365
           +TY  LIN      ++  A+ +L +M+  GL+P    F  ++ G    G F E++   ++
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 366 EDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
            +  G   S   +  LL+  C   +F LA+    +M    +     ++   I  LC+N  
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY------------------------ 458
           + +A  LL  M    + PD  TYSA + G CK+  +                        
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 459 -----------EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
                      ++A+R++  +  +    D  +++ LV  LC+  K+ EA E   CM+ +G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              ++ SF+ LI G     +  KA  +       G   T  TY  ++ GL K    ++  
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             L  +     A+D   Y  L+ +M +   L      F  MV+  ++PD  T  SL+ GL
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSS-MYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               +  +      +  +   VL +  MY   ++G++K G      Y  + M   G  PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 687 -ATTHGLLVGSS 697
             TT+ ++ G S
Sbjct: 719 IVTTNAMIDGYS 730



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 124/535 (23%), Positives = 220/535 (41%), Gaps = 42/535 (7%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV-SI 259
           N    + L+ V      I+ +L+ FR M   G  P+  T   ++ G +  S  D SV S 
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL-GSVVKSGEDVSVWSF 180

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM    I  +++ +  +I +LC E   E++  L + M      P  +TY  +++  C+
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             R   A ++L+ M   G+      +  ++  LC   +  +    L D    +  P    
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 376 HNALLECCCNAGKFFLAKCILEKM---------------ADRKIADCD------------ 408
           +N L+    N GK  +A  +L +M                D  I++ +            
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 409 ---------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                    S+ + +  LC+N E   A     RM  + V     TY+  + G CK    +
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+ +  ++S   +  D ++YS L+ G C+V +   A E+ C + + G S +   ++ LI
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           Y  C M  + +AIR+       G +    T+  ++  L K  +  +    +  M  +G  
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +  ++  LI       +       F+ M K G  P   T  SLL GL  G  L      
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  L +    +D+ MYN L+  + K G  ++A  L   M+ +  +PD+ T+  L+
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 216/508 (42%), Gaps = 21/508 (4%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEE 290
           C  N   ++I+I+  +    + DS+ I   M   G     S YTC  I+  + +  +   
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYG--FNPSVYTCNAILGSVVKSGEDVS 176

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
                K M    + PD  T+  LIN LC     + ++ +++ M   G  PT   +  ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 351 GLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             C+ G+F  ++  L+         D C Y     N L+   C + +      +L  M  
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTY-----NMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 402 RKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           R I   + ++N  I       ++  A +LL  M+   + P+  T++A + G     N+++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL++F  + A+ L    +SY  L++GLC+  +   A   +  M +NG  +   ++  +I 
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC    +D+A+ L +     G      TY+ ++ G  K+ R K    ++ ++   G + 
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +   Y  LI +      LK+    +  M+  G   D  T   L+  L    ++      +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVG 699
             + SD  + ++  ++ LING    G   +A  + D M   G  P   T+G LL G   G
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 700 EEI-DSRRFAFDSSSFPDSVSDILAEGL 726
             + ++ +F     + P +V  ++   L
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTL 619



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 126/591 (21%), Positives = 257/591 (43%), Gaps = 30/591 (5%)

Query: 150  AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
            A+R+   M   G       FNV++ ++ +  +  A+     + M   GI+PN  + + L+
Sbjct: 492  AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK-VAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 210  EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
                 +     A   F  M K G  P   T+  ++KGL     + ++   L  +  +   
Sbjct: 551  NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 270  LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++   Y  ++  +C+   L +A+ LF  M    ++PD  TY  LI+ LC   +   A   
Sbjct: 611  VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670

Query: 330  LEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCC 384
             ++    G + P   ++   V G+ + G++   + F E  D  G+       NA+++   
Sbjct: 671  AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730

Query: 385  NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
              GK      +L +M ++    +  ++NI +    + +++  ++ L   ++++ ++PD  
Sbjct: 731  RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 790

Query: 444  TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            T  + VLG C+    E  L++ +    + + +D  +++ L+   C   +I  A ++   M
Sbjct: 791  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850

Query: 504  SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            +  G SL   + + ++  L    +  ++  +       G S  +  Y  ++ GL ++   
Sbjct: 851  TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 910

Query: 564  KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            K   VV  +M+         A   +++++++  K  +  L    M+K  LVP   +  +L
Sbjct: 911  KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970

Query: 624  LH------GLADGSQLHLVSS--GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
            +H       + +  +L +V S  G+         LD   YN+LI GL  +G  + A  L 
Sbjct: 971  MHLCCKNGNVIEALELRVVMSNCGLK--------LDLVSYNVLITGLCAKGDMALAFELY 1022

Query: 676  DLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGL 726
            + M G G++ +ATT+  L+       + +R  AF  +     + D+LA G 
Sbjct: 1023 EEMKGDGFLANATTYKALI-----RGLLARETAFSGADII--LKDLLARGF 1066



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 1/206 (0%)

Query: 147  VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
            +N A  ++  M S G  L  D  + ++  +    R F +   V  EM K GI P      
Sbjct: 840  INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR-FQESRMVLHEMSKQGISPESRKYI 898

Query: 207  YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
             L+  L     I++A      M     CP +     +++ L    + D++  +L  M  +
Sbjct: 899  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958

Query: 267  GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
             +   ++ +T ++ + C+   + EA+ L  +M    L  D ++Y  LI  LC    +  A
Sbjct: 959  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018

Query: 327  NDILEDMIVIGLTPTDDVFVDIVRGL 352
             ++ E+M   G       +  ++RGL
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGL 1044


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 151/612 (24%), Positives = 263/612 (42%), Gaps = 46/612 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V + LI +   ++    +  ++ +   M   GF  SV   N +LG++V+     + + 
Sbjct: 163 PSVYDILIRV---YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           F+ KEM+K  I P+V T N L+ VL      E +    ++M K G  P   T+  V+   
Sbjct: 220 FL-KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R   ++ +L  M   G+  ++  Y  +I  LCR N++ +   L + MR   + P+E
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN--FL 365
           +TY  LIN      ++  A+ +L +M+  GL+P    F  ++ G    G F E++   ++
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398

Query: 366 EDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
            +  G   S   +  LL+  C   +F LA+    +M    +     ++   I  LC+N  
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY------------------------ 458
           + +A  LL  M    + PD  TYSA + G CK+  +                        
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518

Query: 459 -----------EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
                      ++A+R++  +  +    D  +++ LV  LC+  K+ EA E   CM+ +G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              ++ SF+ LI G     +  KA  +       G   T  TY  ++ GL K    ++  
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             L  +     A+D   Y  L+ +M +   L      F  MV+  ++PD  T  SL+ GL
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSS-MYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               +  +      +  +   VL +  MY   ++G++K G      Y  + M   G  PD
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758

Query: 687 -ATTHGLLVGSS 697
             TT+ ++ G S
Sbjct: 759 IVTTNAMIDGYS 770



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 124/535 (23%), Positives = 220/535 (41%), Gaps = 42/535 (7%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV-SI 259
           N    + L+ V      I+ +L+ FR M   G  P+  T   ++ G +  S  D SV S 
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL-GSVVKSGEDVSVWSF 220

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM    I  +++ +  +I +LC E   E++  L + M      P  +TY  +++  C+
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             R   A ++L+ M   G+      +  ++  LC   +  +    L D    +  P    
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340

Query: 376 HNALLECCCNAGKFFLAKCILEKM---------------ADRKIADCD------------ 408
           +N L+    N GK  +A  +L +M                D  I++ +            
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400

Query: 409 ---------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                    S+ + +  LC+N E   A     RM  + V     TY+  + G CK    +
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+ +  ++S   +  D ++YS L+ G C+V +   A E+ C + + G S +   ++ LI
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           Y  C M  + +AIR+       G +    T+  ++  L K  +  +    +  M  +G  
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +  ++  LI       +       F+ M K G  P   T  SLL GL  G  L      
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  L +    +D+ MYN L+  + K G  ++A  L   M+ +  +PD+ T+  L+
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 216/508 (42%), Gaps = 21/508 (4%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEE 290
           C  N   ++I+I+  +    + DS+ I   M   G     S YTC  I+  + +  +   
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYG--FNPSVYTCNAILGSVVKSGEDVS 216

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
                K M    + PD  T+  LIN LC     + ++ +++ M   G  PT   +  ++ 
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276

Query: 351 GLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             C+ G+F  ++  L+         D C Y     N L+   C + +      +L  M  
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTY-----NMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 402 RKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           R I   + ++N  I       ++  A +LL  M+   + P+  T++A + G     N+++
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL++F  + A+ L    +SY  L++GLC+  +   A   +  M +NG  +   ++  +I 
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC    +D+A+ L +     G      TY+ ++ G  K+ R K    ++ ++   G + 
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +   Y  LI +      LK+    +  M+  G   D  T   L+  L    ++      +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVG 699
             + SD  + ++  ++ LING    G   +A  + D M   G  P   T+G LL G   G
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 700 EEI-DSRRFAFDSSSFPDSVSDILAEGL 726
             + ++ +F     + P +V  ++   L
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTL 659



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 118/548 (21%), Positives = 239/548 (43%), Gaps = 29/548 (5%)

Query: 193  MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            M   GI+PN  + + L+     +     A   F  M K G  P   T+  ++KGL     
Sbjct: 574  MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633

Query: 253  VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            + ++   L  +  +   ++   Y  ++  +C+   L +A+ LF  M    ++PD  TY  
Sbjct: 634  LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693

Query: 313  LINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKC 369
            LI+ LC   +   A    ++    G + P   ++   V G+ + G++   + F E  D  
Sbjct: 694  LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753

Query: 370  GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
            G+       NA+++     GK      +L +M ++    +  ++NI +    + +++  +
Sbjct: 754  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813

Query: 427  YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            + L   ++++ ++PD  T  + VLG C+    E  L++ +    + + +D  +++ L+  
Sbjct: 814  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873

Query: 487  LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
             C   +I  A ++   M+  G SL   + + ++  L    +  ++  +       G S  
Sbjct: 874  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933

Query: 547  TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
            +  Y  ++ GL ++   K   VV  +M+         A   +++++++  K  +  L   
Sbjct: 934  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993

Query: 607  VMVKAGLVPDRETMLSLLH------GLADGSQLHLVSS--GINKLVSDSEVLDSSMYNIL 658
             M+K  LVP   +  +L+H       + +  +L +V S  G+         LD   YN+L
Sbjct: 994  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK--------LDLVSYNVL 1045

Query: 659  INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSV 718
            I GL  +G  + A  L + M G G++ +ATT+  L+       + +R  AF  +     +
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI-----RGLLARETAFSGADII--L 1098

Query: 719  SDILAEGL 726
             D+LA G 
Sbjct: 1099 KDLLARGF 1106



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/401 (21%), Positives = 171/401 (42%), Gaps = 14/401 (3%)

Query: 187  VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            +F  +   +  ++PN       ++ +F+  + ++ +    +M   G  P+  T   +I G
Sbjct: 709  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768

Query: 247  LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 +++ +  +L EM +      L+ Y  ++    +   +  +  L++ +    ++PD
Sbjct: 769  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828

Query: 307  ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +LT   L+  +CE+  L+    IL+  I  G+      F  ++   C  G+    +N+  
Sbjct: 829  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE----INWAF 884

Query: 367  DKCGYVTSPHNALLECCCNA--------GKFFLAKCILEKMADRKIADCDSWNIP-IRWL 417
            D    +TS   +L +  C+A         +F  ++ +L +M+ + I+      I  I  L
Sbjct: 885  DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 944

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            C   +I+ A+ +   M+   + P     SA V    K    ++A  + R +    LV   
Sbjct: 945  CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 1004

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             S++ L+   C+   + EA+E+   MS  G  L   S+N+LI GLC    +  A  L   
Sbjct: 1005 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1064

Query: 538  AYSSGTSYTTSTYTKIMLGLVKLQRA-KDLLVVLAQMLVEG 577
                G     +TY  ++ GL+  + A     ++L  +L  G
Sbjct: 1065 MKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1105



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 1/206 (0%)

Query: 147  VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
            +N A  ++  M S G  L  D  + ++  +    R F +   V  EM K GI P      
Sbjct: 880  INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR-FQESRMVLHEMSKQGISPESRKYI 938

Query: 207  YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
             L+  L     I++A      M     CP +     +++ L    + D++  +L  M  +
Sbjct: 939  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998

Query: 267  GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
             +   ++ +T ++ + C+   + EA+ L  +M    L  D ++Y  LI  LC    +  A
Sbjct: 999  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058

Query: 327  NDILEDMIVIGLTPTDDVFVDIVRGL 352
             ++ E+M   G       +  ++RGL
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIRGL 1084


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 255/551 (46%), Gaps = 47/551 (8%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQ-KRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           +P  + RV+++  D   AL  F+W       F HTA ++  ++  L       E   L +
Sbjct: 42  TPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFR 101

Query: 121 N-MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL--------------- 164
           + ++    P+V    I ++  F N   ++ A+ +L  M S GF                 
Sbjct: 102 SELLASCEPDVCSYNI-VISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA 160

Query: 165 -----------------SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
                            +V  +  ++ A    K+   + + + +EM + G  PN+ T N 
Sbjct: 161 GDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKK-LEEAMKLLEEMRERGCPPNLVTYNV 219

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++ L + + + +A D  ++M + G  PN  TF  ++ G      VDD+  +LG M   G
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++  +  Y+ +I  LC+  K  EA  + + M+   + PD  TY  LI+ LC+  ++++A 
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECC 383
            +L  M   G TP   V+  I+   C+ GK  E+   L++      SP    +N +++  
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 399

Query: 384 CNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
           C  GK   A+ ILE+M +    + D  +++  I  LC+++ + +A +LL RM  +   PD
Sbjct: 400 CKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 459

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TY+  + G CK    E+A  + + +       + ++Y+ L+ GLC+  K+ EA  V  
Sbjct: 460 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 519

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL--RSLAYSSGTSYTTSTYTKIMLGLVK 559
            M   GC  +  ++N ++ GLCV  ++ +A +L  R     +  S   +TY  I+  L+ 
Sbjct: 520 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS 579

Query: 560 ---LQRAKDLL 567
              +Q A+ LL
Sbjct: 580 SDLVQEAEQLL 590



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 231/514 (44%), Gaps = 42/514 (8%)

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-- 263
           N LL+VL    +   A D FR      C P+  ++ IVI G      +  ++ +L EM  
Sbjct: 81  NSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKS 140

Query: 264 ------------------------------FDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
                                           +G    +  YT +I    R  KLEEA++
Sbjct: 141 AGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMK 200

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L + MR     P+ +TY  L++ LC+   +  A D+++ MI  G  P    F  +V G C
Sbjct: 201 LLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFC 260

Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCD 408
           + G  D++   L         P    ++AL++  C + KF  AK +LE+M  R +  D  
Sbjct: 261 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           +++  I  LC+ ++I +A ++L RM  S   PD   YS+ +   CK     +A +  +++
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS-SSFNILIYGLCVMRK 527
             Q    D ++Y+ +++GLC++ KI EA  +   M ++G  L    +++ +I GLC    
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           + +A +L      +G +    TYT I+ GL K  R ++   +L  M   GCA +V  Y  
Sbjct: 441 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 500

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI  + +  K+ +       M  AG  P+  T  ++++GL    ++      + ++  D 
Sbjct: 501 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KDG 559

Query: 648 EV---LDSSMYNILINGLWKEGLTSQASYLLDLM 678
                 D++ Y  ++N L    L  +A  LL+ M
Sbjct: 560 RAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 210/445 (47%), Gaps = 11/445 (2%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM  AG  P+  T   ++  +     ++ A+D  R M   GC PN  T+  +I      
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARA 192

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++++++ +L EM + G    L  Y  ++  LC+ + +  A  + K M      P+ +T+
Sbjct: 193 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTF 252

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             L++  C+   +DDA  +L  M+  G+ P    +  ++ GLC+  KF E+   LE+   
Sbjct: 253 NSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT 312

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
              +P    ++AL+   C A K   A+ +L +MA      D   ++  I   C++ ++ +
Sbjct: 313 RGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE 372

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL-DSISYSKLV 484
           A + L  M      PD  TY+  + G CKL    +A  +  Q+     VL D ++YS ++
Sbjct: 373 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVI 432

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+ + + EA ++   M K GC+    ++  +I GLC   ++++A  L      +G +
Sbjct: 433 NGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCA 492

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TYT ++ GL K ++  +   V+ +M   GC  ++  Y  ++  +    ++K+    
Sbjct: 493 PNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQL 552

Query: 605 FNVMV--KAGLVPDRETMLSLLHGL 627
              M   +A   PD  T  ++++ L
Sbjct: 553 VQRMKDGRAECSPDAATYRTIVNAL 577



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 197/423 (46%), Gaps = 3/423 (0%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  ++ +L R  K  EA  LF+        PD  +Y  +I+  C    L  A ++LE+M 
Sbjct: 80  WNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMK 139

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSPHNALLECCCNAGKFFLAK 393
             G  P       I+  +   G  D +++ L    C      + AL+     A K   A 
Sbjct: 140 SAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAM 199

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +LE+M +R    +  ++N+ +  LC+   +  A +++ +M+     P+  T+++ V G 
Sbjct: 200 KLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGF 259

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK  N +DA ++   + A+ +  + ++YS L++GLC+ +K  EA EV   M   G +  +
Sbjct: 260 CKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDA 319

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +++ LI+GLC   K+++A ++      SG +     Y+ I+    K  +  +    L +
Sbjct: 320 FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 379

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG-LVPDRETMLSLLHGLADGS 631
           M  +  + DV  Y  +I  + +  K+ +  +    M ++G ++PD  T  ++++GL    
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            L      ++++       D   Y  +I+GL K G   +A YLL  M   G  P+  T+ 
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499

Query: 692 LLV 694
            L+
Sbjct: 500 TLI 502



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/354 (20%), Positives = 141/354 (39%), Gaps = 68/354 (19%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           SWN  ++ L   ++ R+A +L    +++S  PD  +Y+  + G C   +   AL +  ++
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 469 SAQSLVLDS--------------------------------ISYSKLVEGLCQVEKITEA 496
            +     D+                                ++Y+ L+    + +K+ EA
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEA 198

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLC----------VMRK------------------- 527
           +++   M + GC  +  ++N+L+  LC          V++K                   
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDG 258

Query: 528 ------VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                 VD A +L  +  + G      TY+ ++ GL K Q+  +   VL +M   G   D
Sbjct: 259 FCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPD 318

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
              Y  LI  + + +K+++       M  +G  PD     S++H      +L      + 
Sbjct: 319 AFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQ 378

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV-PDATTHGLLV 694
           ++    +  D   YN +I+GL K G  ++A  +L+ M   G V PD  T+  ++
Sbjct: 379 EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVI 432



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 12/268 (4%)

Query: 436 SSVVPDCATYSAF-----VLGKC--KLCNYEDALRVFRQVSAQ--SLVLDSISYSKLVEG 486
           S++ PD + +S       ++G+    L + + AL  FR   A        + S++ L++ 
Sbjct: 27  SAIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQV 86

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           L + +K  EA ++F       C     S+NI+I G C    +  A+ L     S+G +  
Sbjct: 87  LVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPD 146

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             T+T I+  +     A DL   +  +   GC  +V  Y  LI + +   KL++      
Sbjct: 147 AFTHTPIITAMAN---AGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLE 203

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M + G  P+  T   L+  L   S +      + K++      +   +N L++G  K G
Sbjct: 204 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 263

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
               A  LL +M+ KG  P+  T+  L+
Sbjct: 264 NVDDARKLLGIMVAKGMRPNVVTYSALI 291


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 252/529 (47%), Gaps = 37/529 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +I + K   +  + +  +M   GI PN+ TL+ L+      NR+  A     ++
Sbjct: 64  FNKLLTSIAKMKH-HSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKI 122

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I+G+    ++ +++ +  +M   G + ++  Y  +I  LC+    
Sbjct: 123 LKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNT 182

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL   M   +  P+   Y  +I+ LC++ ++ +A ++  +M+  G++P  D+F   
Sbjct: 183 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP--DIFT-- 238

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                      +N+L+   CN  ++     +L +M D KI  D 
Sbjct: 239 ---------------------------YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S+N  +  LC+  ++ +A++++ +M+   V P+  TY+A + G C L   ++A++VF  
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +  + + ISY+ L+ G C++++I +A+ +F  M +      + +++ LI+GLC + +
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 391

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL--DVEAY 585
           +  AI L     +        TY  ++  L K +   + + +L    +EG  L  D++  
Sbjct: 392 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA--IEGSNLDPDIQVN 449

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            I I  M    +L+     F+ +   GL PD  T   +++GL     L   S    ++  
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +   L+  +YN +  G  +   TS+A  LL  M+ +G+  DA+T  L V
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 558



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 209/479 (43%), Gaps = 8/479 (1%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M+S G   ++   ++++ +     R GFA    V  +++K G  P+  T   L+  ++  
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFA--FSVLAKILKLGHQPDTATFTTLIRGIYVE 144

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +I  AL  F +M  +G  P+  T+  +I GL        ++ +LG M     Q  +  Y
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             II  LC++ ++ EA  LF  M    + PD  TY  LI+ LC          +L +M+ 
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
             + P    F  +V  LC+ GK  E+ + ++        P    + AL++  C   +   
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDE 324

Query: 392 AKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  + + M  +  + +  S+N  I   C+ + I KA  L G M    ++PD  TYS  + 
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 384

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C +   +DA+ +F ++ A S + + ++Y  L++ LC+   + EA+ +   +  +    
Sbjct: 385 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 444

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
                NI I G+C   +++ A  L S   S G      TY+ ++ GL +     +   + 
Sbjct: 445 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
            +M   GC L+   Y  + +     N+          MV  G   D  TM   +  L+D
Sbjct: 505 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 563



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/479 (21%), Positives = 203/479 (42%), Gaps = 30/479 (6%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N I+ A+  F RM +    P++  F  ++  +         +S+  +M   GI   +   
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C  N++  A  +   +  L   PD  T+  LI  +    ++ +A  + + MI 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG 159

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            G  P    +  ++ GLC+VG    ++  L            ++++  C    F      
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLL-----------GSMVQKNCQPNVF------ 202

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                        ++N  I  LC++ ++ +A+ L   MV   + PD  TY++ +   C L
Sbjct: 203 -------------AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           C ++    +  ++    ++ D +S++ +V+ LC+  K+TEA +V   M + G   +  ++
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             L+ G C++ ++D+A+++       G      +Y  ++ G  K+QR    + +  +M  
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 369

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +    D   Y  LI  +    +L+D    F+ MV    +P+  T   LL  L     L  
Sbjct: 370 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 429

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             + +  +   +   D  + NI I+G+ + G    A  L   +  KG  PD  T+ +++
Sbjct: 430 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 488



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 167/390 (42%), Gaps = 9/390 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L    + S+A+++   + +QK  Q     Y  +I  L     V E   L   MV +
Sbjct: 172 LINGLCKVGNTSAAIRLLGSM-VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                     SL+ +  N         +L  M        V  FN V+ A+ +E +   +
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK-VTE 289

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
              V  +M++ G+ PNV T   L++     + ++ A+  F  M  KGC PN  ++  +I 
Sbjct: 290 AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN 349

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G     R+D ++ + GEM    +  +   Y+ +I  LC   +L++AI LF  M A   +P
Sbjct: 350 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 409

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + +TY  L++ LC+N  L +A  +L+ +    L P   V    + G+C  G+ + + +  
Sbjct: 410 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR--KIADCDSWNIPIRWLCE 419
            +       P    ++ ++   C  G    A  +  +M +    +  C  +N   R    
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC-IYNTITRGFLR 528

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           N E  +A +LL  MV      D +T + FV
Sbjct: 529 NNETSRAIQLLQEMVARGFSADASTMTLFV 558



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 63/142 (44%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           + R  A+ + + K +  + + P++   N  ++ +     +E+A D F  +  KG  P+  
Sbjct: 423 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 482

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ I+I GL     +D++  +  EM + G  L    Y  I     R N+   AI+L + M
Sbjct: 483 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 542

Query: 299 RALDLMPDELTYEELINCLCEN 320
            A     D  T    +  L ++
Sbjct: 543 VARGFSADASTMTLFVKMLSDD 564


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 160/645 (24%), Positives = 284/645 (44%), Gaps = 32/645 (4%)

Query: 80  LKIFKWVSIQKRFQHTA-DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS-- 136
           L  F W S Q      A D +  + + L          GL   M++  YP+    L S  
Sbjct: 105 LDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRA-YPSPPVVLASIH 163

Query: 137 ----------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
                           LV ++    RV  A  V++ M   G   S+   N +L  ++   
Sbjct: 164 RALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRAD 223

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
              A    V + MV AGI P+V T + L+E   +    ++A      M ++GC  N+ T+
Sbjct: 224 -AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTY 282

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            ++I GL  +  V+++     +M D G+  +   Y  +I  LC+  +  EA  L   M  
Sbjct: 283 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 342

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
            +L P+ + Y  LI+        D+A  ++++M+  G+ P    + ++VRGLC++G+ D 
Sbjct: 343 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 402

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIR 415
           +   L+        P    +N ++E          A  +L +M +  I+ +  +++I I 
Sbjct: 403 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH 462

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC++ E  KA +LL  M    + P+   Y+  + G C+  N   A  +F +++  +++ 
Sbjct: 463 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 522

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D   Y+ L+ GL +V ++ E+ + F  M + G   +  +++ LI+G      ++ A +L 
Sbjct: 523 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 582

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                +G       Y  ++    K    + +      ML +G  LD   Y ILI ++S  
Sbjct: 583 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGL---ADGSQLHLVSSGINKLVSDSEVLDS 652
             ++      + + K G VPD     SL+ GL   AD  +   +   ++K   D  ++  
Sbjct: 643 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV-- 700

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
             YN LI+GL K G  S A  + + +L KG VP+  T+  L+  S
Sbjct: 701 -CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 148/600 (24%), Positives = 249/600 (41%), Gaps = 48/600 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI--SLVFSFVNHYRVNGAMRVLV 155
           TY  +I  L  +G VEE  G  ++M  E Y  V +     +L+       R N A  +L 
Sbjct: 281 TYNVLIAGLCRSGAVEEAFGFKKDM--EDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 338

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFE 214
            M+    K +V V+  ++   + E  G AD  F + KEMV AG+ PN  T + L+  L +
Sbjct: 339 EMSCAELKPNVVVYANLIDGFMRE--GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 396

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             +++ A    ++M +    P++ T+ ++I+G   +    D+  +L EM + GI   +  
Sbjct: 397 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 456

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y+ +I  LC+  + E+A  L + M    L P+   Y  LI+  C    +  A +I + M 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            + + P    +  ++ GL +VG+ +ES  +          P    ++ L+      G   
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576

Query: 391 LAKCILEKMADRKIADCDSWNIPI-RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A+ ++++M D  +   D   I +     ++++I K       M+   V+ D   Y   +
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
                  N E A RV   +     V D   YS L+ GLC+     +A  +   MSK G  
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 696

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            +   +N LI GLC                S   SY  + +  I                
Sbjct: 697 PNIVCYNALIDGLC---------------KSGDISYARNVFNSI---------------- 725

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           LA+ LV  C      Y  LI    +   + +    +N M+  G+ PD      L  G + 
Sbjct: 726 LAKGLVPNCV----TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              L      I ++        SS +N L++G  K G   +   LL +++G+G VP+A T
Sbjct: 782 AGDLEQAMFLIEEMFLRGHASISS-FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 840



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 140/635 (22%), Positives = 260/635 (40%), Gaps = 75/635 (11%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  +I      GN +E   + + MV       +    +LV       +++ A  +L  M 
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 159 SGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
               +     +N+++ G      +   D   +  EM  AGI PNV T + ++  L ++  
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSK--KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            E A D    M  KG  PN+  +  +I G      V  +  I  +M  + +  +L  Y  
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 529

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  L +  ++EE+ + F  M+   L+P+E TY  LI+   +N  L+ A  +++ M+  G
Sbjct: 530 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 589

Query: 338 LTPTDDVFVDI-----------------------------------VRGLCEVGKFDESV 362
           L P D +++D+                                   +  L   G  + + 
Sbjct: 590 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 649

Query: 363 NFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             L   +K G V   H  ++L+   C       A  IL++M+ + +  +   +N  I  L
Sbjct: 650 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C++ +I  A  +   ++   +VP+C TY++ + G CK+ +  +A  ++ ++ A  +  D+
Sbjct: 710 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 769

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             YS L  G      + +A+ +   M   G + S SSFN L+ G C   K+ + ++L  +
Sbjct: 770 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHV 828

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G      T   I+ GL +  +  ++  +  +               L Q  SE   
Sbjct: 829 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE---------------LQQKTSESAA 873

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK-------LVSDSEVL 650
               +LF + M+  G +P        L  + D  + H     ++K       +V+ S  +
Sbjct: 874 RHFSSLFMD-MINQGKIP--------LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPM 924

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
             S Y  +++ L ++G  S+A  LL  M  +G  P
Sbjct: 925 GCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/593 (19%), Positives = 233/593 (39%), Gaps = 98/593 (16%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           A K+ K + +    Q    TY  ++  L   G ++    L + MV++ +   R   I+  
Sbjct: 368 AFKMIKEM-VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH---RPDTITYN 423

Query: 139 FSFVNHYRVNG---AMRVLVNMNSGGFKLSVDVFNVVLGAIVE----EK----------R 181
                H+R +    A R+L  M + G   +V  +++++  + +    EK          +
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483

Query: 182 GFADFVFVYK--------------------EMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           G     FVY                     +M K  ++P++   N L+  L +  R+E +
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
              F +M ++G  PN  T+  +I G + N  ++ +  ++  M D G++     Y  ++  
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 603

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
             + + +E+    FK M    +M D   Y  LI+ L  +  ++ A  +L  +   G  P 
Sbjct: 604 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 663

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
             V+  ++ GLC+    +++   L++       P    +NAL++  C +G    A+ +  
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723

Query: 398 K-MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF-------- 448
             +A   + +C ++   I   C+  +I  A+ L   M+ + + PD   YS          
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783

Query: 449 --------------------------VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
                                     V G CK    ++ L++   +  + LV ++++   
Sbjct: 784 DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL------------------CV 524
           ++ GL +  K++E   +F  + +     ++  F+ L   +                  C 
Sbjct: 844 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 903

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
              +DKA+ LR +  +       S+Y  I+  L +  +  + L +L +M   G
Sbjct: 904 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 956



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/389 (20%), Positives = 158/389 (40%), Gaps = 57/389 (14%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + M+  G+ PN      LLE  F+++ IE     F+ M  +G   ++R + I+I  L ++
Sbjct: 583 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             ++ +  +L  +   G   ++  Y+ +I  LC+    E+A  +   M    + P+ + Y
Sbjct: 643 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 702

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+ LC++  +  A ++   ++  GL P    +  ++ G C+VG    +     +   
Sbjct: 703 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 762

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
              +P    ++ L   C +AG    A  ++E+M  R  A   S+N  +   C+  ++++ 
Sbjct: 763 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQET 822

Query: 427 YELLGRMVVSSVVPDCATYSAFVLG----------------------------------- 451
            +LL  ++   +VP+  T    + G                                   
Sbjct: 823 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 882

Query: 452 ------------------KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                              CK  N + AL +   + A+S  +   SY  +V+ LC+  K+
Sbjct: 883 MINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 942

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           +EA+ +   M K G   S +   IL+  L
Sbjct: 943 SEALNLLKEMDKRGICPSENQCLILLTNL 971


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/567 (24%), Positives = 268/567 (47%), Gaps = 17/567 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           ++V  +    R+  A R++  M    F      FN ++ A+    R   D + V+ +M+ 
Sbjct: 135 TMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGR-VPDALAVFDDMLH 190

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P+V T + LL+   + +    A+     M  KGC P+  T+ ++I  +     VD+
Sbjct: 191 RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 250

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +++IL ++   G + +   YT ++  LC   + +E   LF  M +    PDE+T+  ++ 
Sbjct: 251 ALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVT 310

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+   +D A  +++ M   G  P    +  I+ GLC+VG+ D++V  L     Y   P
Sbjct: 311 SLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 370

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAY 427
               +  +L+  C+  ++  A+   E MA+   +DC     ++N  I  LC+   + +A 
Sbjct: 371 DTIAYTTVLKGLCSIEQWEHAE---ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +++ +M  +   PD  TY++ + G C     +DA+ +   + +     D ++++ L++GL
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C V++  +A ++   M  + C   +++FN +I  LC    + +AI    +   +G     
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQ 547

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
           STY  ++  L+K  + ++ L +L+ M       D+  Y  +I ++++  K+++      V
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEALDLLRV 605

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV  GL PD  T  SL +G+            + +L       D++ YN ++ G  +   
Sbjct: 606 MVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWR 665

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
           T  A      M+  G +PD +T+ +L+
Sbjct: 666 TDIAIDCFAHMVSSGCMPDESTYIILL 692



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 215/462 (46%), Gaps = 8/462 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ +  N   V+ A+ +L ++ S G K     +  VL ++   +R + +   ++ EM   
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER-WKEVEELFAEMASN 296

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
              P+  T N ++  L +   ++ A+     M + GC P+  T+  ++ GL    RVDD+
Sbjct: 297 KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDA 356

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           V +L  +   G + +   YT ++  LC   + E A  L   M   D  PDE+T+  +I  
Sbjct: 357 VELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIAS 416

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC+   +D A  ++E M   G  P    +  I+ GLC     D+++  L +   Y   P 
Sbjct: 417 LCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPD 476

Query: 377 ----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
               N LL+  C+  ++  A+ ++  M       D  ++N  I  LC+   + +A E L 
Sbjct: 477 IVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLK 536

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M  +  +P+ +TY+  V    K    ++AL++   ++  +   D I+Y+ ++  + +  
Sbjct: 537 IMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTP--DLITYNTVISNITKAG 594

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+ EA+++   M  NG S  + ++  L YG+C     D+AIR+       G S   + Y 
Sbjct: 595 KMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
            I+LG  +  R    +   A M+  GC  D   Y IL+++++
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALA 696



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 133/595 (22%), Positives = 254/595 (42%), Gaps = 59/595 (9%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGG-----FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
           S +    ++ A+ ++ ++ SGG       L V   N+++  +    R  AD   V+  + 
Sbjct: 67  SLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGR-VADAERVFATL- 124

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G    V T N ++       RIE   D  R +      P++ TF  +I+ L    RV 
Sbjct: 125 --GASATVVTYNTMVNGYCRAGRIE---DARRLISGMPFPPDTFTFNPLIRALCVRGRVP 179

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D++++  +M   G    +  Y+ ++   C+ +   +A+ L   MRA    PD +TY  LI
Sbjct: 180 DALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLI 239

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N                                    +C  G  DE++N L D   +   
Sbjct: 240 N-----------------------------------AMCNEGDVDEALNILSDLPSHGCK 264

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL 429
           P    +  +L+  C + ++   + +  +MA  K A D  ++N  +  LC+   + +A ++
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKV 324

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           +  M     +PD  TYS+ + G C +   +DA+ +  ++ +     D+I+Y+ +++GLC 
Sbjct: 325 VDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 384

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           +E+   A E+   M  + C     +FN +I  LC    VD+AI++      +G +    T
Sbjct: 385 IEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT 444

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  I+ GL   +   D + +L+ +   GC  D+  +  L++ +   ++ +D       M+
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            +   PD  T  +++  L     L      +  +  +  + + S YNI+++ L K G T 
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFDSSSFPDSVS 719
           +A  LL  M      PD  T+  ++        + E +D  R    +   PD+++
Sbjct: 565 EALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTIT 617



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 211/473 (44%), Gaps = 7/473 (1%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  + N  D+  AL I   +      +  A TY  ++  L  +   +E+E L   M   
Sbjct: 238 LINAMCNEGDVDEALNILSDLP-SHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASN 296

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           +         ++V S      V+ A++V+ +M+  G    +  ++ +L  + +  R   D
Sbjct: 297 KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR-VDD 355

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            V +   +   G  P+      +L+ L    + E A +    M    C P+  TF  VI 
Sbjct: 356 AVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIA 415

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L     VD ++ ++ +M + G   ++  Y  II  LC E  +++A+ L   +++    P
Sbjct: 416 SLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +T+  L+  LC   R +DA  ++ +M+     P    F  ++  LC+ G   +++  L
Sbjct: 476 DIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETL 535

Query: 366 ----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
               E+ C    S +N +++    AGK   A  +L  M +    D  ++N  I  + +  
Sbjct: 536 KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN-GTPDLITYNTVISNITKAG 594

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ +A +LL  MV + + PD  TY +   G C+    + A+R+  ++    L  D+  Y+
Sbjct: 595 KMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            ++ G CQ  +   A++ F  M  +GC    S++ IL+  L     +D+A +L
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQL 707



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 34/267 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++    N   ++ AM +L N+ S G K  +  FN +L  +    R + D   +   M+ 
Sbjct: 447 SIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR-WEDAEQLMVNMMH 505

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +   P+  T N ++  L +   +  A++  + M + GC PN  T+ IV+  L+   +  +
Sbjct: 506 SDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQE 565

Query: 256 SVSILG--------------------------EMFDL-------GIQLELSFYTCIIPML 282
           ++ +L                           E  DL       G+  +   Y  +   +
Sbjct: 566 ALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGI 625

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           CRE+  + AIR+   ++ + L PD   Y +++   C+N R D A D    M+  G  P +
Sbjct: 626 CREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDE 685

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKC 369
             ++ ++  L      DE+   L + C
Sbjct: 686 STYIILLEALAYECLLDEAKQLLVNLC 712



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 3/226 (1%)

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           E+ E L  NM+    P       +++ S      +  A+  L  M   G   +   +N+V
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553

Query: 173 LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
           + A++  K G           +  G  P++ T N ++  + +  ++E ALD  R M   G
Sbjct: 554 VDALL--KAGKTQEALKLLSGMTNG-TPDLITYNTVISNITKAGKMEEALDLLRVMVSNG 610

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P++ T+  +  G+      D ++ +L  + D+G+  + +FY  I+   C+  + + AI
Sbjct: 611 LSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAI 670

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
             F  M +   MPDE TY  L+  L     LD+A  +L ++  +G+
Sbjct: 671 DCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716



 Score = 42.7 bits (99), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 76/176 (43%), Gaps = 3/176 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           +V + +   +   A+++L  M +G   L    +N V+  I +  +   + + + + MV  
Sbjct: 553 VVDALLKAGKTQEALKLLSGMTNGTPDLIT--YNTVISNITKAGK-MEEALDLLRVMVSN 609

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ P+  T   L   +   +  + A+    R+   G  P++  +  ++ G   N R D +
Sbjct: 610 GLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIA 669

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +     M   G   + S Y  ++  L  E  L+EA +L   + +L ++   L  EE
Sbjct: 670 IDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSLIEEE 725


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 251/528 (47%), Gaps = 33/528 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +I + K   +  + + ++M   GI P+V TL  ++  L   NR++ A     ++
Sbjct: 73  FNRLLTSIAKTKH-HSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKI 131

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I+GL    ++ +++ +  +M   G Q  +  Y  +I  LC+    
Sbjct: 132 LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 191

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  P+ + +  LI+ LC++ ++ +A +I  +MI  G++P    +  +
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           + GLC++ ++            +VT+                    ++ +M D KI  D 
Sbjct: 252 IHGLCKLCEWK-----------HVTT--------------------LMNEMVDSKIMPDV 280

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            + N  +  LC+   + +A++++  M+   V P+  TY+A + G C     + A++VF  
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +  V + ISY+ L+ G C+++ + +A+ +F  MS+   + ++ ++N LI+GLC + +
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  AI L     + G      TY  +   L K +     + +L  +       D++ Y  
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           ++  M    +L+D    F+ +   GL P+  T   ++HGL     L   S   +++  + 
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
              +   YN++  G  +     +   LL+ ML +G+  D +T  LLVG
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 223/514 (43%), Gaps = 16/514 (3%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F RM  K   P++  F  ++  +         +S+  +M   GI  ++   
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I  LC  N+++ A      +  L   PD  T+  LI  LC   ++ +A  + + MI 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG    ++  L    +  C       + L++  C   +   
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  I  +M  + I+ +  ++N  I  LC+  E +    L+  MV S ++PD  T +  V 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  V   +  + +  + ++Y+ L++G C   ++  AV+VF  M    C  
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  S+N LI G C ++ VDKA+ L         +  T TY  ++ GL  + R +D + + 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D+  Y  L   + +   L         +  +   PD +   ++L G+   
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S     +   YNI+I+GL K+GL ++AS L   M   G  P+  T+
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 691 GLLVGS-----------SVGEEIDSRRFAFDSSS 713
            L+               + EE+ +R F+ D S+
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVST 562



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 141/300 (47%), Gaps = 1/300 (0%)

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A     RM+     P    ++  +    K  ++   L + RQ+ +  +  D  + + ++
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
             LC + ++  A      + K G    +++F  LI GLCV  K+ +A+ L       G  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL K+      + +L  M    C  +V  +  LI S+ +  ++ +    
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ M+  G+ P+  T  SL+HGL    +   V++ +N++V    + D    N +++ L K
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILA 723
           EG+ ++A  ++D+M+ +G  P+  T+  L+ G  +  E+D     FD+    D V+++++
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 170/691 (24%), Positives = 300/691 (43%), Gaps = 66/691 (9%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL---GLAG 110
           ++S+   +SP H+  +     D  +AL    W+S   R++H+  +Y  ++  L   G  G
Sbjct: 81  LKSMVPAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 140

Query: 111 NVEEME-----------------GLCQNMVKERYPNVREALI-----SLVFSFVNHYRVN 148
            V ++                   LC+ M K+    ++  LI     +L+ S      V+
Sbjct: 141 VVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVD 200

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVF--------------- 188
              +V + M       ++  +N ++        VEE   +   +                
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLI 260

Query: 189 --------------VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
                         V+KEM   G   N     +L+  L    RI+ A+D F +M    C 
Sbjct: 261 MGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCY 320

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P  RT+ ++IK L  + R  ++++++ EM + GI+  +  YT +I  LC + KLE+A  L
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M    LMP+ +TY  LIN  C+   ++DA D++E M    L P    + ++++G C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 355 --VGKFDESVN-FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
             V K    +N  LE K       +N+L++  C +G F  A  +L  M DR +   D W 
Sbjct: 441 RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP-DPWT 499

Query: 412 IP--IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
               I  LC+++ + +A +L   +    V+P+   Y+A + G CK     +A  +  ++ 
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           +++ + +S++++ L+ GLC   K+ EA  +   M K     + S+  ILI+ L      D
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A R      SSGT     TYT  +    +  R +D   ++A+M   G + D+  Y  LI
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           +   +  +     +    M   G  P + T LSL+  L +  +   V  G   +   S +
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE-MKYGKVKGGEPGVCVMSNM 738

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           ++  +   L+  + + G+T  A     LMLG
Sbjct: 739 MEFDIVVELLEKMVEHGVTPNAKSYEKLMLG 769



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 157/645 (24%), Positives = 282/645 (43%), Gaps = 29/645 (4%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREA 133
           DL SA K+FK + + K  +     Y  +I  L +   ++E   L   M  +  YP VR  
Sbjct: 268 DLDSAFKVFKEMPL-KGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTY 326

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
            + L+ +     R + A+ ++  M   G K ++  + V++ ++  + +       +  +M
Sbjct: 327 TV-LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCK-LEKARELLGQM 384

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G++PNV T N L+    +   IE ALD    M  +   PN+RT+  +IKG    + V
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-V 443

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             ++ +L +M +  +  ++  Y  +I   CR    + A RL  +M    L+PD  TY  +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+ LC++ R+++A D+ + +    + P   ++  ++ G C+ GK +E+   LE       
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNC 563

Query: 374 SPH----NALLECCCNAGKFFLAKCILEKMADRKIADCDSWN-IPIRWLCENEEIRKAYE 428
            P+    NAL+   C  GK   A  + EKM    +    S + I I  L ++ +   AY 
Sbjct: 564 LPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYR 623

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
              +M+ S   PD  TY+ F+   C+    +DA  +  ++    +  D  +YS L++G  
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYG 683

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIY---------------GLCVMRKV---DK 530
            + +   A  V   M   GC  S  +F  LI                G+CVM  +   D 
Sbjct: 684 DLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDI 743

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV-EGCALDVEAYCILI 589
            + L       G +    +Y K+MLG+ ++   +    V   M   EG +     +  L+
Sbjct: 744 VVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALL 803

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
               +  K  + A   + M+  G +P  E+   L+  L    +    +S    L+     
Sbjct: 804 SCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYY 863

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            D   + I+I+G+ K+GL      L ++M   G    + T+ LL+
Sbjct: 864 DDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 246/544 (45%), Gaps = 17/544 (3%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           +K SV  +  +L  ++    G+   VF  + ++        DTL ++L++  + N+ ES 
Sbjct: 119 YKHSVYSYASLLTLLINN--GYVGVVFKIRLLMIKSCDSVADTL-FVLDLCRKMNKDESF 175

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
             +++ +   GC      +  ++  L     VD+   +  EM +  +   +  Y  ++  
Sbjct: 176 ELKYKLI--IGC------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG 227

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C+   +EEA +   M+    L PD  TY  LI   C+   LD A  + ++M + G    
Sbjct: 228 YCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRN 287

Query: 342 DDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           +  +  ++ GLC   + DE+++      +D C      +  L++  C + +   A  +++
Sbjct: 288 EVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVK 347

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M ++ I  +  ++ + I  LC   ++ KA ELLG+M+   ++P+  TY+A + G CK  
Sbjct: 348 EMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             EDAL V   + +++L  ++ +Y++L++G C+   + +A+ V   M +        ++N
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYN 466

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI G C     D A RL SL    G      TYT ++  L K +R ++   +   +  +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
               +V  Y  LI    +  K+ +  L    M+    +P+  T  +L+HGL    +L   
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +    K+V        S   ILI+ L K+G    A      ML  G  PDA T+   + +
Sbjct: 587 TLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQT 646

Query: 697 SVGE 700
              E
Sbjct: 647 YCRE 650



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/434 (20%), Positives = 178/434 (41%), Gaps = 62/434 (14%)

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           + A R+L  MN  G       +  ++ ++ + KR   +   ++  + +  ++PNV     
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR-VEEACDLFDSLEQKDVIPNVVMYTA 537

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++   +  ++  A     +M  K C PNS TF  +I GL  + ++ ++  +  +M  + 
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +Q  +S  T +I  L ++   + A R F+ M +    PD  TY   I   C   RL DA 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE 657

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV-----------------------NF 364
           D++  M   G++P    +  +++G  ++G+ + +                        + 
Sbjct: 658 DMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
           LE K G V      +     N  +F +   +LEKM +  +  +  S+   +  +CE   +
Sbjct: 718 LEMKYGKVKGGEPGVC-VMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL 776

Query: 424 RKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYEDALRV------------------ 464
           R A ++   M     + P    ++A +   CKL  + +A +V                  
Sbjct: 777 RVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKI 836

Query: 465 -----------------FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
                            F+ +       D +++  +++G+ +   +    E+F  M KNG
Sbjct: 837 LICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896

Query: 508 CSLSSSSFNILIYG 521
           C+ SS ++++LI G
Sbjct: 897 CTFSSQTYSLLIEG 910


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 239/524 (45%), Gaps = 36/524 (6%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   G+ PNV TLN L+      NR+  A     ++ K G  P+  TF  +I+GL    
Sbjct: 90  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 149

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++ +++ +  +M D G Q  +  Y  +I  LC+      AIRL + M   +  PD + Y 
Sbjct: 150 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 209

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+ LC++ ++ +A ++   M+  G++P  D+F                          
Sbjct: 210 SIIDSLCKDRQVTEAFNLFSQMVGQGISP--DIFT------------------------- 242

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               + +L+   CN  ++     +L +M + KI  D   ++  +  LC+  ++ +A+E++
Sbjct: 243 ----YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 298

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+   V PD  TY+  + G C     ++A++VF  +  +    D ISY+ L+ G C++
Sbjct: 299 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            KI +A+ +F  M +      + ++N L+YGLC + ++  AI L     + G      TY
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + ++  L K +  ++ + +L  +       D++ Y I+I  M    +L+     F+ +  
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            GL P   T   ++HGL     L+  +    ++  +    D   YN +  G  +   T +
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538

Query: 671 ASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSF 714
           A  LL+ ML +G+  D+    L    SV  E D R F F    F
Sbjct: 539 AIQLLEEMLARGFSADSCFLML----SVLSEDDRRYFIFIPEGF 578



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 209/480 (43%), Gaps = 5/480 (1%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F R+      P+   F  ++  +         +S+  +M   G+   +   
Sbjct: 44  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 103

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C  N++  A  +   +  L   PD  T+  LI  LC   ++ +A  + + MI 
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG    ++  L    +  C      + ++++  C   +   
Sbjct: 164 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 223

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  +M  + I+ D  ++   +  LC   E +    LL +MV S ++PD   +S  V 
Sbjct: 224 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 283

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  +   +  + +  D ++Y+ L++G C   ++ EAV+VF  M + G + 
Sbjct: 284 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 343

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S+  LI G C + K+DKA+ L            T TY  +M GL  + R +D + + 
Sbjct: 344 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALF 403

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D+  Y IL+ S+ +   L++       +  + L PD +    ++ G+   
Sbjct: 404 HEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA 463

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S         YNI+I+GL K GL ++A+ L   M G    PD  T+
Sbjct: 464 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTY 523



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 197/447 (44%), Gaps = 5/447 (1%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD++S    +  +     +  +  ++  + +       + L   M +  + P+  T   
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN  C   R+  A  +L  ++ +G  P    F  ++RGLC  GK  E+++  +      
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    +  L+   C  G    A  +L  M       D   +   I  LC++ ++ +A+
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L  +MV   + PD  TY++ V   C LC ++    +  Q+    ++ D + +S +V+ L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+TEA E+   M + G      ++  L+ G C+  ++D+A+++  +    G +   
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +YT ++ G  K+ +    + +  +M  +    D + Y  L+  +    +L+D    F+ 
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV  G +PD  T   LL  L     L    + +  + + +   D  +YNI+I+G+ + G 
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
              A  L   +  KG  P   T+ +++
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMI 492



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 4/223 (1%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+  MV+ G  P+V +   L+    + ++I+ A+  F  M +K   P+++T+  ++ G
Sbjct: 330 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYG 389

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+ D++++  EM   G   +L  Y+ ++  LC+   LEEA+ L K + A +L PD
Sbjct: 390 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPD 449

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
              Y  +I+ +C    L+ A D+  ++   GL P+   +  ++ GLC+ G  +E+     
Sbjct: 450 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 509

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA 405
           +  G   SP    +N +        +   A  +LE+M  R  +
Sbjct: 510 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 110/252 (43%), Gaps = 1/252 (0%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           IQ+  +    TY  ++    L   ++E   +   MV++ +     +  +L+  +   +++
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 361

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           + AM +   M    +      +N ++  +    R   D + ++ EMV  G +P++ T + 
Sbjct: 362 DKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR-LQDAIALFHEMVARGQMPDLVTYSI 420

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           LL+ L +   +E A+   + +      P+ + + I+I G+     ++ +  +   +   G
Sbjct: 421 LLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 480

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +   +  Y  +I  LC+   L EA +LF  M   D  PD  TY  +     +N     A 
Sbjct: 481 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 540

Query: 328 DILEDMIVIGLT 339
            +LE+M+  G +
Sbjct: 541 QLLEEMLARGFS 552


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 240/517 (46%), Gaps = 9/517 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + ++  M++    P++   + LL  +       + L  +++M   G   N+ T  I+I
Sbjct: 37  DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILI 96

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                 +R+  + S+LG++  LG Q   + +T +I  LC E K+ EA++LF  M      
Sbjct: 97  NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ 156

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD LTY  LIN LC+      A   L  M      PT  V+  I+  LC+  +  E+++ 
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSL 216

Query: 365 LEDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
             D      SP+N    +L+   C  G +  A  +   M  RKI  D  ++N  +  LC+
Sbjct: 217 FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCK 276

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              + KA+ ++  M+ S + PD  TY++ + G C        + VF  +  +  V   IS
Sbjct: 277 EGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVIS 336

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ G C+++ + +A+ +F  MS+ G    + ++N LI+GLC + ++  AI L     
Sbjct: 337 YTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 396

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL--DVEAYCILIQSMSEQNK 597
             G      TY  +   L K  R  + +V+L   ++EG  L  D+  Y I++  M    +
Sbjct: 397 VYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK--VIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L+     F+ +   GL PD  T   +++GL     L   S    ++  +    ++  YN+
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  G  +   T +A  L   ML +G+  D +T  LLV
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 224/515 (43%), Gaps = 57/515 (11%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD++S+   M  +     +  ++ ++  + R       + L+K M +  +  +  T   
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN  C   RL  A  +L D++ +G  P+   F  ++RGLC  GK  E++   +   G  
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDS----WNIPIRWLCENEEIR 424
             P    +  L+   C  G    A   L  M  R   +C      ++  I  LC++ ++ 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR---NCRPTVVVYSTIIDSLCKDRQLT 211

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  L   M+   + P+  TYS+ + G C L ++++A+R+F  +  + ++ D ++++ LV
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 485 EGLCQVEKITEA-----------------------------------VEVFCCMSKNGCS 509
           + LC+   + +A                                   V VF  M + GC 
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            S  S+  LI G C ++ +DKA+ L       G    T TY  ++ GL  + R +D + +
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             +M+V G   D+  Y IL   + + ++L +  +   V+    L PD      ++ G+  
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 451

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             +L       +KL S     D   Y I+INGL ++GL ++AS L   M   G  P+A T
Sbjct: 452 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACT 511

Query: 690 HGLLVGS-----------SVGEEIDSRRFAFDSSS 713
           + L+               + +E+ SR F+ D S+
Sbjct: 512 YNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVST 546



 Score = 45.8 bits (107), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 60/293 (20%), Positives = 107/293 (36%), Gaps = 71/293 (24%)

Query: 490 VEKITEAVEVFCCMSKN-----------------------------------GCSLSSSS 514
           V  I +A+ +F  M +                                    G   ++ +
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
            NILI   C + ++  A  +       G   +T+T+T ++ GL    +  + L +  +M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 575 VEGCALDVEAYCILI----------------QSMSEQN-------------------KLK 599
            EG   DV  Y  LI                +SM ++N                   +L 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    F+ M+  G+ P+  T  SL+HGL               ++    + D   +N L+
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDS 711
           + L KEG+  +A Y++D+M+     PD  T+  L+ G  +  E+      FD+
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDT 324


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 258/561 (45%), Gaps = 33/561 (5%)

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           V ++N+VL + + E +    F ++YK+MV AG+ P   TLN L+  L ++ R E A + F
Sbjct: 116 VYLYNMVLESSLREDK-VDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVF 174

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
            +M  KGC PN  +F I+++G         ++ +L  M   G+Q     Y  +I   CRE
Sbjct: 175 DKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCRE 234

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV---IGLT-PT 341
            + EEA RL + MR   L PD +T+   I+ LC   ++ +A+ I  DM +   +GL  P 
Sbjct: 235 GRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPN 294

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT--SPHNALLECCCNAGKFFLAKCILE 397
              F  ++ G C+ G  +E+   +E   + G +     +N  L      GK   A+  L+
Sbjct: 295 ITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALK 354

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M D+ I  +  S+N  +  LC+N  I  A  ++G M+ S + PD  TYS  + G C   
Sbjct: 355 EMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTG 414

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
               A  +  ++  +    ++ + + L+  L +  +I EA ++   M++    L + + N
Sbjct: 415 KVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCN 474

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-----------------------TYTKI 553
           I+I GLC   K+D+A+ +    +  G++   +                       TY+ I
Sbjct: 475 IVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSII 534

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + GL K  R  +      +M+ +    D   Y   I S  +  K+         M K G 
Sbjct: 535 INGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGC 594

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
               +T  SL+ GL   +Q+  +   ++ +       +   YN +I+ L + G    A+ 
Sbjct: 595 NKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATS 654

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           LLD ML KG  P+ ++  LL+
Sbjct: 655 LLDEMLQKGISPNISSFRLLI 675



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 147/610 (24%), Positives = 272/610 (44%), Gaps = 41/610 (6%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ +L  M S G + +  ++N ++ +   E R   +   + + M + G+ P+V T N  +
Sbjct: 205 ALELLDGMGSFGVQPNKVIYNTLISSFCREGRN-EEAERLVERMREDGLFPDVVTFNSRI 263

Query: 210 EVLFETNRIESALDQFRRMH---KKGCC-PNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L    +I  A   FR M    + G   PN  TF ++++G      ++++ +++  M  
Sbjct: 264 SALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKR 323

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G  +EL  Y   +  L R  KL EA    K M    + P+  ++  +++ LC+N  + D
Sbjct: 324 NGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISD 383

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLE 381
           A  I+  MI  G+ P    +  ++ G C  GK  ++ N L +      SP+    N LL 
Sbjct: 384 ARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLH 443

Query: 382 CCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS--- 437
                G+ F A+ +L+KM +R    D  + NI I  LC++ ++ +A E++  M +     
Sbjct: 444 SLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAA 503

Query: 438 --------------------VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                                +PD  TYS  + G CK    ++A + F ++  +SL  DS
Sbjct: 504 LGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDS 563

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           I Y   +   C+  KI+ A  V   M K GC+ S  ++N LI GL    ++ +   L   
Sbjct: 564 IIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDD 623

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G +    TY  ++  L +  R KD   +L +ML +G + ++ ++ +LI++  + + 
Sbjct: 624 MKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD 683

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLL-HGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
                  F + +   +   +E + SL+ + L  G ++       +  +     L +  YN
Sbjct: 684 FGVVKEVFEIALS--ICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYN 741

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPD 716
            LI  L K+ +   AS +L  M+ KG+  D  +   ++     + +  R    D+    +
Sbjct: 742 DLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVI-----DGLGKRGKKHDADELAE 796

Query: 717 SVSDILAEGL 726
            + D+ +EG+
Sbjct: 797 RMMDMASEGM 806



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 5/143 (3%)

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           V  Y ++++S   ++K+   +  +  MV AG+ P+  T+  L+ GL D  +        +
Sbjct: 116 VYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFD 175

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVG 699
           K+       +   + IL+ G  + GL+ +A  LLD M   G  P+   +  L+ S    G
Sbjct: 176 KMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREG 235

Query: 700 EEIDSRRFA---FDSSSFPDSVS 719
              ++ R      +   FPD V+
Sbjct: 236 RNEEAERLVERMREDGLFPDVVT 258


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 249/535 (46%), Gaps = 18/535 (3%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAG----IVPNVDTLNYLLEVLFETNRIESALDQF 225
           N +L A V  +R F+D    +  +        I PN+ T N +L  L     ++ A+  F
Sbjct: 123 NALLDAFVRARR-FSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLF 181

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             + ++   P+  T+  ++ GL    R+D ++ +L EM    +Q ++  Y  ++    + 
Sbjct: 182 DSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKA 241

Query: 286 NKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            + E+ +R++ K+++     P+  TY  +++ LC+  R  +  ++ E M+   L P    
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVIT 301

Query: 345 FVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMA 400
           +  ++ GLC  G  D +     +  K G V   + +N+L++  C AG+   A    +   
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG 361

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYE 459
              + +  ++NI I+ L ++  + +A EL   +    + +PD  T+   + G C+     
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A  +F +       LD  SYS ++ GLC V ++ +AV+V+  M K+GC  +S  +N LI
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C + +   A+R+ S    +G S T  TY  ++ GL K ++ ++   V  +M+  G  
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHL 635
            D+  Y  LI+ +    K+ D    +  ++  GL  D      L+HGL    +    LH+
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            S    K      ++    YN L++GL++ G   +A+ L   +   G  PD  ++
Sbjct: 602 FSDMKEKKNCPPNLV---TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/581 (22%), Positives = 265/581 (45%), Gaps = 55/581 (9%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV----DVFNVVLGAIVEEKRGFAD-FVFVY 190
           +L+ +FV   R + A     +++ G F   +      +N+VL ++    RG  D  V ++
Sbjct: 124 ALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLC--ARGDLDRAVTLF 181

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
             + +  + P+  T + L+  L + +R++ ALD    M +    P+   +  ++ G    
Sbjct: 182 DSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKA 241

Query: 251 SRVDDSVSILGEMF-DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  + +  ++  D G +  L+ Y  ++  LC+  + +E   +++ M A +L PD +T
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVIT 301

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  LI+ LC +  +D A  +  ++I  GL     ++  +V+G C+ G+  E+  F  D  
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-DSA 360

Query: 370 GYVT----SPHNALLECCCNAGKFFLAKCI-LEKMADRKIA---DCDSWNIPIRWLCENE 421
           G+        +N +++   ++G   + + I L  + ++ +A   D  ++   I  LC+N 
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSG--MVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNG 418

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
              KA+ +     VS    D  +YS+ + G C +    DA++V+ ++       +S  Y+
Sbjct: 419 FANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ G CQV + ++AV ++  M+ NGCS +  ++N LI GLC   K  +A  +      +
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN 538

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM--------- 592
           G +   +TY  ++ GL   ++  D L +  Q+L +G  +DV  + ILI  +         
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598

Query: 593 ----SEQNKLKDC-----------------------ALFFNVMVKAGLVPDRETMLSLLH 625
               S+  + K+C                       A  +  + + GL PD  +  + + 
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           GL    ++H     +++++S   +     +NIL+  + K G
Sbjct: 659 GLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 216/518 (41%), Gaps = 73/518 (14%)

Query: 219 ESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----FDLGIQLELS 273
           ++ALD FR +    GC P  R+   ++   +   R  D+ +    +    F   I   L 
Sbjct: 100 DAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 159

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  ++  LC    L+ A+ LF  +R   + PD +TY  L+  L +  RLD A D+L++M
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEM 219

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
                 P   V  D+V                   C      +NALL  C  AG+F    
Sbjct: 220 ------PRSRVQPDVV-------------------C------YNALLGGCFKAGEFEKVM 248

Query: 394 CILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            + +K+     A  +  ++N+ +  LC+    ++  E+  RMV +++ PD  TY   + G
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA--------------- 496
            C+  + + A RV+ ++    LV+D+  Y+ LV+G CQ  ++ EA               
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNL 368

Query: 497 -------------------VEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
                              +E++  + K+  C   + +F  LI+GLC     +KA  +  
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
            A  SG      +Y+ ++ GL  + R  D + V  +M  +GC  +   Y  LI    +  
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +  D    ++ M   G  P   T  +L+ GL    +    SS   ++V +    D + Y 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            LI GL+ +     A  +   +L KG   D   H +L+
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILI 586



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 132/291 (45%), Gaps = 49/291 (16%)

Query: 115 MEGLCQN-MVKERYPNVREALISL----VFSF-------VNHYRVNGAMRVLVNMNSGGF 162
           + GLCQN    + +    EA +S     VFS+        N  R+  A++V   M+  G 
Sbjct: 411 IHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGC 470

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K +  ++N ++    +  R  +D V +Y +M   G  P V T N L++ L +  + + A 
Sbjct: 471 KPNSHIYNALISGFCQVYRT-SDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              R M + G  P+  T+  +I+GL ++ ++DD++SI  ++   G+++++  +  +I  L
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589

Query: 283 CRENKLEEAIRLFKMMRA--------------LD----------------------LMPD 306
           C   K++EA+ +F  M+               +D                      L PD
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            ++Y   I  LC   R+ +   +L++++  G+ PT   +  +VR + + G 
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGP 700


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 161/648 (24%), Positives = 283/648 (43%), Gaps = 50/648 (7%)

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           +F+     Y  +I       + + M  L Q M +  Y        +L+  F    RV+ A
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLL 209
           + +L  M S      + ++NV + +    K G  D  + +   ++A G+ P+  T   ++
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSF--GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
            VL + NR++ A++ F  + K    P +  +  +I G  +  + D++ S+L      G  
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y CI+  L +  K++EA+++F+ M+  D  P+  TY  LI+ LC   +LD A ++
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFEL 399

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCN 385
            + M   GL P       +V  LC+  K DE+    E+    V +P      +L++    
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN--EEIRK--AYELLGRMVVSSVVPD 441
            G+   A  + EKM D   +DC + +I    L +N     RK   +++   M+  +  PD
Sbjct: 460 VGRVDDAYKVYEKMLD---SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
               + ++    K    E    +F ++ A+  V D+ SYS L+ GL +     E  E+F 
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + GC L + ++NI+I G C   KV+KA +L     + G   T  TY  ++ GL K+ 
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R  +  ++  +   +   L+V  Y  LI    +  ++ +  L    +++ GL P+  T  
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696

Query: 622 SLLHGLADGSQLH-----------------LVSSGI-----------NK-LVSDSEVLDS 652
           SLL  L    +++                  V+ GI           NK  V   E+   
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 653 SM------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            M      Y  +I+GL K G  ++A  L D     G VPD+  +  ++
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 164/709 (23%), Positives = 287/709 (40%), Gaps = 92/709 (12%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           E  + +L     P+ +I VL    D++ A++ F+W   +    H  ++Y  ++L +    
Sbjct: 53  ENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV-F 169
           N + ++                                   ++L  M+  GF  SV+   
Sbjct: 113 NFDALD-----------------------------------QILGEMSVAGFGPSVNTCI 137

Query: 170 NVVLGAIVEEK-RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
            +VLG +   K R   D V   + M K    P       L+      N  +  L  F++M
Sbjct: 138 EMVLGCVKANKLREGYDVV---QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G  P    F  +I+G     RVD ++S+L EM    +  ++  Y   I    +  K+
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + A + F  + A  L PDE+TY  +I  LC+  RLD+A ++ E +      P    +  +
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G    GKFDE+ + LE +    + P    +N +L C    GK   A  + E+M     
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  ++NI I  LC   ++  A+EL   M  + + P+  T +  V   CK    ++A  +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI----- 519
           F ++  +    D I++  L++GL +V ++ +A +V+  M  + C  +S  +  LI     
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494

Query: 520 ----------------------------YGLCVM--------RKVDKAIRLRSLAYSSGT 543
                                       Y  C+         R + + I+ R     +  
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA-- 552

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                +Y+ ++ GL+K   A +   +   M  +GC LD  AY I+I    +  K+     
Sbjct: 553 ----RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
               M   G  P   T  S++ GLA   +L        +  S    L+  +Y+ LI+G  
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV-GEEIDSRRFAFDS 711
           K G   +A  +L+ ++ KG  P+  T   L+ + V  EEI+     F S
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 255/581 (43%), Gaps = 17/581 (2%)

Query: 59  HNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + L PD      +I VL   N L  A+++F+ +   +R   T   Y  MI+  G AG  +
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFD 325

Query: 114 EMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           E   L +    K   P+V  A   ++       +V+ A++V   M       ++  +N++
Sbjct: 326 EAYSLLERQRAKGSIPSVI-AYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNIL 383

Query: 173 LGAIVEEKRGFADFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           +  +   + G  D  F  ++ M KAG+ PNV T+N +++ L ++ +++ A   F  M  K
Sbjct: 384 IDMLC--RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
            C P+  TF  +I GL    RVDD+  +  +M D   +     YT +I       + E+ 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
            +++K M   +  PD       ++C+ +    +    + E++      P    +  ++ G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561

Query: 352 LCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
           L + G  +E+        E  C   T  +N +++  C  GK   A  +LE+M  +     
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++   I  L + + + +AY L        +  +   YS+ + G  K+   ++A  +  
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++  + L  +  +++ L++ L + E+I EA+  F  M +  C+ +  ++ ILI GLC +R
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K +KA          G   +T +YT ++ GL K     +   +  +    G   D   Y 
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +I+ +S  N+  D    F    + GL    +T + LL  L
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/541 (21%), Positives = 247/541 (45%), Gaps = 9/541 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  MI  L  A  ++E   + +++ K R      A  +++  + +  + + A  +L   
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G   SV  +N +L  +   K G  D      E +K    PN+ T N L+++L    +
Sbjct: 335 RAKGSIPSVIAYNCILTCL--RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-FDLGIQLELSFYT 276
           +++A +    M K G  PN RT  I++  L  + ++D++ ++  EM + +    E++F +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  L +  ++++A ++++ M   D   + + Y  LI     + R +D + I +DMI  
Sbjct: 453 -LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
             +P   +    +  + + G+ ++     E+       P    ++ L+     AG     
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571

Query: 393 KCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +   M ++  + D  ++NI I   C+  ++ KAY+LL  M      P   TY + + G
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K+   ++A  +F +  ++ + L+ + YS L++G  +V +I EA  +   + + G + +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++N L+  L    ++++A+           +    TY  ++ GL K+++     V   
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M  +G      +Y  +I  +++   + +    F+     G VPD     +++ GL++G+
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811

Query: 632 Q 632
           +
Sbjct: 812 R 812



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 119/539 (22%), Positives = 227/539 (42%), Gaps = 53/539 (9%)

Query: 207 YLLEVLFETNRIESALDQFRRMHKK---GCCPNSRTFEIVIKGLIANSRVDDSV-SILGE 262
           +++ VL     +  A++ FR   ++     CP S    +++   +A  R  D++  ILGE
Sbjct: 67  FVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV---MARCRNFDALDQILGE 123

Query: 263 MFDLGIQLELSFYTCIIPML--CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
           M   G    ++  TCI  +L   + NKL E   + +MMR     P    Y  LI      
Sbjct: 124 MSVAGFGPSVN--TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
              D    + + M  +G  PT  +F  ++RG  + G+ D +++ L++           L 
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241

Query: 381 ECCCNA----GKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
             C ++    GK  +A K   E  A+    D  ++   I  LC+   + +A E+   +  
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           +  VP    Y+  ++G      +++A  +  +  A+  +   I+Y+ ++  L ++ K+ E
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A++VF  M K+    + S++NILI  LC   K+D A  LR     +G      T   ++ 
Sbjct: 362 ALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            L K Q+  +   +  +M  + C  D   +C LI  + +  ++ D    +  M+ +    
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480

Query: 616 DRETMLSLL-----HGLA-DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           +     SL+     HG   DG +++        +++ +   D  + N  ++ ++K G   
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIY------KDMINQNCSPDLQLLNTYMDCMFKAGEPE 534

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGN 728
           +                        G ++ EEI +RRF  D+ S+   +  ++  G  N
Sbjct: 535 K------------------------GRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 246/559 (44%), Gaps = 47/559 (8%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           +N A+ ++    S GF   V  +N +L A++  K+       ++KEMV++G+ PNV T N
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+        +E  L  F  M + GC PN  T+  +I       ++ ++  +L  M   
Sbjct: 208 ILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+   L  Y  +I  LCRE +++E   + + M     +PD +T+  LIN  C       A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
             +  +M+  GL+P    +  ++  +C+ G  + ++ F                      
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF---------------------- 365

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                    L++M DR +  +  ++   I    +   +++AY+++  MV +   P   TY
Sbjct: 366 ---------LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +A + G C L   EDA  + +++  +  + D +SYS ++ G C+ +++ +A ++   M  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G S   ++++ LI GLC  R++ +   L     S G      TYT ++           
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDK 536

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR-------- 617
            L +  +M+ +G + D+  Y +LI   ++Q++ K+       ++    VP+         
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596

Query: 618 -------ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
                  ++ L+L+ G      ++     +  ++     L+  +YN++I+G  K G   +
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656

Query: 671 ASYLLDLMLGKGWVPDATT 689
           A  L   ML  G+ P + T
Sbjct: 657 AYNLYKEMLHSGFAPHSVT 675



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 236/549 (42%), Gaps = 61/549 (11%)

Query: 197 GIVPNVDTLNYLLEVLFETNR-IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           G +P V + N +L+ +  T + ++ A   F+ M + G  PN  T+ I+I+G      ++ 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +   GEM   G    +  Y  II   C+  K+ EA +L ++M    L P+ ++Y  +IN
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC   ++ + ++ILE+M      P    F  ++ G C VG F +++    +      SP
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               +  L+   C AG    A   L++M DR +  +  ++   I    +   +++AY+++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV +   P   TY+A + G C L   EDA  + +++  +  + D +SYS ++ G    
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF--- 458

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
                                           C  ++++KA +L+    + G S   +TY
Sbjct: 459 --------------------------------CRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + ++ GL K +R  ++  +  +ML  G   D   Y  LI +   +  L       + M++
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN---------- 660
            G  PD  T   L++G    S+       + KL+ +  V +   YN LI+          
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 661 -----GLWKEGLTSQASYLLDLMLGKGW-----VPDATTHGLLVGSSVGEEIDSRRFAFD 710
                G   +GL ++A  +L+ ML KG+     V +   HG     ++ +  +  +    
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666

Query: 711 SSSFPDSVS 719
           S   P SV+
Sbjct: 667 SGFAPHSVT 675



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 205/481 (42%), Gaps = 33/481 (6%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR-VDDSVSILGEMFDLGIQLELSF 274
           N I  AL         G  P   ++  ++  +I   + V  +  I  EM + G+   +  
Sbjct: 146 NLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYT 205

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I   C    LE  +  F  M     +P+ +TY  +I+  C+  ++ +A  +L  M 
Sbjct: 206 YNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
           + GL P    +  ++ GLC  G+  E+                                 
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSE------------------------------- 294

Query: 395 ILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           ILE+M+ R+ + D  ++N  I   C      +A  L   MV + + P+  TY+  +   C
Sbjct: 295 ILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMC 354

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K  N   A+    Q+  + L  +  +Y+ L++G  Q   + +A ++   M +NG + +  
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI G C++ +++ A  L       G      +Y+ I+ G  + Q  +    +  +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           + +G + DV  Y  LIQ + +Q +L +    F  M+  GL PD  T  SL++       L
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  ++++      D   YN+LING  K+  T +A  LL  +L +  VP+  T+  L
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 694 V 694
           +
Sbjct: 595 I 595



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 206/462 (44%), Gaps = 17/462 (3%)

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTC---------IIPMLCRENKLEEAIRLFKMM 298
           +A   V ++V   GE  DL   L+ S+Y C         ++    R N + +A+ +  + 
Sbjct: 101 LAEEVVVNTVDETGE--DLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLA 158

Query: 299 RALDLMPDELTYEELINCLCENLR-LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           ++   MP  L+Y  +++ +    + +  A  I ++M+  G++P    +  ++RG C  G 
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218

Query: 358 FDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
            +  + F      + C      +N +++  C   K   A  +L  MA + +  +  S+N+
Sbjct: 219 LEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC   ++++  E+L  M     VPD  T++  + G C + N+  AL +  ++    
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  + ++Y+ L+  +C+   +  A+E    M   G   +  ++  LI G      + +A 
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           ++      +G + T  TY  ++ G   L R +D   +L +M+  G   DV +Y  +I   
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
               +L+        MV  G+ PD  T  SL+ GL    +L  V     +++S     D 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             Y  LIN    EG   +A  L D M+ KG+ PD  T+ +L+
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 103/261 (39%), Gaps = 40/261 (15%)

Query: 441 DCATYSA---FVLGKCKLCNY-EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            C + SA    V+  C   N    AL +     +   +   +SY+ +++ + + ++  + 
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186

Query: 497 VE-VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
            E +F  M ++G S +  ++NILI G C    ++  +        +G      TY  I+ 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              KL++  +   +L  M ++G   ++ +Y ++I  +  + ++K+ +     M K   VP
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           DR T                                   +N LING    G   QA  L 
Sbjct: 307 DRVT-----------------------------------FNTLINGYCNVGNFHQALVLH 331

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             M+  G  P+  T+  L+ S
Sbjct: 332 AEMVKNGLSPNVVTYTTLINS 352


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 157/642 (24%), Positives = 276/642 (42%), Gaps = 80/642 (12%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL-ISLVFSFVNHYRVNGAMRV 153
           T   Y  +I +L  AG +++++    +      P+  + L ++ + ++    R+  A+  
Sbjct: 34  TIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVL 212
              M+      +   +N ++ A+V     + D    VY  M+ AG+ P+  T    L+  
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNA--AYHDQAHKVYVRMLAAGVAPDARTHTVRLKSF 151

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
             T R   AL   R + ++GC      +  V++GL A+          G  ++       
Sbjct: 152 CLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAH----------GHGYN------- 194

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
                             A  LF  M   D+ PD  T+  +++ LC+   + ++  +L  
Sbjct: 195 ------------------ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAK 236

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS---PHNALLECCCNAGKF 389
           ++  G++         +RGLCE G+ +E+V  +E    YV      +N L+   C   K 
Sbjct: 237 VLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKV 296

Query: 390 FLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A   L +M ++  I D  ++N  I   C++  +++A ELL   V    VPD  TY + 
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G C   + E AL +F +  A+ L  D + Y+ LV+GLC+   I  A++V   M + GC
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416

Query: 509 SLSSSSFNILIYGLCVMR-----------------------------------KVDKAIR 533
                ++NI+I GLC M                                    K+D A++
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQ 476

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L    ++ G +    TY  ++ GL K  +AK++     +M+++GC  +   Y ILI++  
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 536

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           + N+L++ +     M + GLVPD  +  +L+HG      L        KL        + 
Sbjct: 537 KINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATAD 596

Query: 654 MYNILINGLWKEGLTSQ-ASYLLDLMLGKGWVPDATTHGLLV 694
            +NILI G +   L  Q A  +   M+ KG+ PD  T+ +LV
Sbjct: 597 TFNILI-GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILV 637



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 146/677 (21%), Positives = 306/677 (45%), Gaps = 19/677 (2%)

Query: 25  SSLSCANTIPLSSE--TDMIKSHQTTDYEAKIQSLRHNLSPDHL-------IRVLDNTND 75
           SS   A+TIP       +++ + +  D +A + S R +L+PD L       I+       
Sbjct: 27  SSELTASTIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGR 86

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREAL 134
           L +A+  F+ + +       A  Y  ++  L  A   ++   +   M+     P+ R   
Sbjct: 87  LRAAVDAFERMDLFA-CPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHT 145

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
           + L  SF    R + A+R+L +++  G       +  V+  +     G+ +   ++ EM+
Sbjct: 146 VRLK-SFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY-NARHLFDEML 203

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
              + P+V T N +L  L +   +  +     ++ K+G   N  T  I I+GL  + R++
Sbjct: 204 GRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLE 263

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++V+++ E     +  ++  Y  ++  LC+++K++EA +    M     +PD+ TY  +I
Sbjct: 264 EAVALV-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTII 322

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +  C++  L +A ++L+D +  G  P    +  ++ GLC  G  + ++    +       
Sbjct: 323 DGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLK 382

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           P    +N+L++  C  G    A  ++ +M +     D  ++NI I  LC+   I  A  +
Sbjct: 383 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVV 442

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           +   +V   +PD  T++  + G CK    + AL++  ++    +  D I+Y+ ++ GLC+
Sbjct: 443 MNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCK 502

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             K  E  E F  M   GC  ++ ++NILI   C + ++++A  +       G      +
Sbjct: 503 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           +  ++ G  +        ++  ++  +G +   + + ILI + S +  ++     F  M+
Sbjct: 563 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 622

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G  PD  T   L+ GL   + +    + + +++S   V   + +  ++N L      S
Sbjct: 623 SKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVS 682

Query: 670 QASYLLDLMLGKGWVPD 686
           +A  ++ +M+  G VP+
Sbjct: 683 EAVAIIHIMVRMGVVPE 699



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 223/486 (45%), Gaps = 12/486 (2%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E + A + P+V T N L+  L + ++++ A     RM  +GC P+  T+  +I G   + 
Sbjct: 270 ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSG 329

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            + ++  +L +    G   +   Y  +I  LC E  +E A+ LF   +A DL PD + Y 
Sbjct: 330 MLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYN 389

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC-- 369
            L+  LC    +  A  ++ +M+  G  P    +  I+ GLC++G   ++   + D    
Sbjct: 390 SLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVK 449

Query: 370 GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
           GY+      N L++  C   K   A  ++E+M    IA D  ++N  +  LC+  + ++ 
Sbjct: 450 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEV 509

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            E    M++    P+  TY+  +   CK+   E+A  V  ++    LV D++S++ L+ G
Sbjct: 510 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHG 569

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C+   +  A  +F  + + G S ++ +FNILI        +  A ++     S G    
Sbjct: 570 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ GL K          LA+M+ +G    +  +  ++  ++  +++ +     +
Sbjct: 630 LYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIH 689

Query: 607 VMVKAGLVPD-RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           +MV+ G+VP+  +T+LS      D  ++      + +L+    +     Y +L  G+   
Sbjct: 690 IMVRMGVVPEVVDTILS-----TDKKEIAAPKILVEELMKKGHI-SYRAYEVLHEGVRDN 743

Query: 666 GLTSQA 671
            LT +A
Sbjct: 744 KLTRKA 749



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/302 (20%), Positives = 133/302 (44%), Gaps = 2/302 (0%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +R A +   RM + +  P    Y+A +        ++ A +V+ ++ A  +  D+ +++
Sbjct: 86  RLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHT 145

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             ++  C   +   A+ +   +S+ GC    +++  ++ GL        A  L       
Sbjct: 146 VRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGR 205

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
                 +T+  ++  L +     +   +LA++L  G + +     I I+ + E  +L++ 
Sbjct: 206 DVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA 265

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                 M  A + PD  T  +L+ GL   S++   +  + ++++   + D   YN +I+G
Sbjct: 266 VALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDG 324

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDSSSFPDSVSD 720
             K G+  +A+ LL   + KG+VPD  T+  L+     E +I+     F+ +   D   D
Sbjct: 325 YCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPD 384

Query: 721 IL 722
           ++
Sbjct: 385 LV 386



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 1/185 (0%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           I K  +  A TY  +I        +EE  G+   M ++       +  +L+  F  +  +
Sbjct: 517 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDL 576

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           +GA  +   ++  G+  + D FN+++GA    K        ++ EM+  G  P++ T   
Sbjct: 577 DGAYLLFQKLDEKGYSATADTFNILIGAY-SSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++ L +   ++ A      M  KG  P+  TF  ++  L  N RV ++V+I+  M  +G
Sbjct: 636 LVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMG 695

Query: 268 IQLEL 272
           +  E+
Sbjct: 696 VVPEV 700


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/612 (24%), Positives = 263/612 (42%), Gaps = 46/612 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V + LI +   ++    +  ++ +   M   GF  SV   N +LG++V+     + + 
Sbjct: 123 PSVYDILIRV---YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           F+ KEM+K  I P+V T N L+ VL      E +    ++M K G  P   T+  V+   
Sbjct: 180 FL-KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R   ++ +L  M   G+  ++  Y  +I  LCR N++ +   L + MR   + P+E
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN--FL 365
           +TY  LIN      ++  A+ +L +M+  GL+P    F  ++ G    G F E++   ++
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 366 EDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
            +  G   S   +  LL+  C   +F LA+    +M    +     ++   I  LC+N  
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY------------------------ 458
           + +A  LL  M    + PD  TYSA + G CK+  +                        
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 459 -----------EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
                      ++A+R++  +  +    D  +++ LV  LC+  K+ EA E   CM+ +G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              ++ SF+ LI G     +  KA  +       G   T  TY  ++ GL K    ++  
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             L  +     A+D   Y  L+ +M +   L      F  MV+  ++PD  T  SL+ GL
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSS-MYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               +  +      +  +   VL +  MY   ++G++K G      Y  + M   G  PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 687 -ATTHGLLVGSS 697
             TT+ ++ G S
Sbjct: 719 IVTTNAMIDGYS 730



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 124/535 (23%), Positives = 220/535 (41%), Gaps = 42/535 (7%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV-SI 259
           N    + L+ V      I+ +L+ FR M   G  P+  T   ++ G +  S  D SV S 
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL-GSVVKSGEDVSVWSF 180

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM    I  +++ +  +I +LC E   E++  L + M      P  +TY  +++  C+
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             R   A ++L+ M   G+      +  ++  LC   +  +    L D    +  P    
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 376 HNALLECCCNAGKFFLAKCILEKM---------------ADRKIADCD------------ 408
           +N L+    N GK  +A  +L +M                D  I++ +            
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 409 ---------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                    S+ + +  LC+N E   A     RM  + V     TY+  + G CK    +
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+ +  ++S   +  D ++YS L+ G C+V +   A E+ C + + G S +   ++ LI
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           Y  C M  + +AIR+       G +    T+  ++  L K  +  +    +  M  +G  
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +  ++  LI       +       F+ M K G  P   T  SLL GL  G  L      
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  L +    +D+ MYN L+  + K G  ++A  L   M+ +  +PD+ T+  L+
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 216/508 (42%), Gaps = 21/508 (4%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEE 290
           C  N   ++I+I+  +    + DS+ I   M   G     S YTC  I+  + +  +   
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNP--SVYTCNAILGSVVKSGEDVS 176

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
                K M    + PD  T+  LIN LC     + ++ +++ M   G  PT   +  ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 351 GLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             C+ G+F  ++  L+         D C Y     N L+   C + +      +L  M  
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTY-----NMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 402 RKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           R I   + ++N  I       ++  A +LL  M+   + P+  T++A + G     N+++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL++F  + A+ L    +SY  L++GLC+  +   A   +  M +NG  +   ++  +I 
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC    +D+A+ L +     G      TY+ ++ G  K+ R K    ++ ++   G + 
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +   Y  LI +      LK+    +  M+  G   D  T   L+  L    ++      +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVG 699
             + SD  + ++  ++ LING    G   +A  + D M   G  P   T+G LL G   G
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 700 EEI-DSRRFAFDSSSFPDSVSDILAEGL 726
             + ++ +F     + P +V  ++   L
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTL 619



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 118/548 (21%), Positives = 239/548 (43%), Gaps = 29/548 (5%)

Query: 193  MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            M   GI+PN  + + L+     +     A   F  M K G  P   T+  ++KGL     
Sbjct: 534  MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 253  VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            + ++   L  +  +   ++   Y  ++  +C+   L +A+ LF  M    ++PD  TY  
Sbjct: 594  LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 313  LINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKC 369
            LI+ LC   +   A    ++    G + P   ++   V G+ + G++   + F E  D  
Sbjct: 654  LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713

Query: 370  GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
            G+       NA+++     GK      +L +M ++    +  ++NI +    + +++  +
Sbjct: 714  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 427  YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            + L   ++++ ++PD  T  + VLG C+    E  L++ +    + + +D  +++ L+  
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 487  LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
             C   +I  A ++   M+  G SL   + + ++  L    +  ++  +       G S  
Sbjct: 834  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 547  TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
            +  Y  ++ GL ++   K   VV  +M+         A   +++++++  K  +  L   
Sbjct: 894  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953

Query: 607  VMVKAGLVPDRETMLSLLH------GLADGSQLHLVSS--GINKLVSDSEVLDSSMYNIL 658
             M+K  LVP   +  +L+H       + +  +L +V S  G+         LD   YN+L
Sbjct: 954  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK--------LDLVSYNVL 1005

Query: 659  INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSV 718
            I GL  +G  + A  L + M G G++ +ATT+  L+       + +R  AF  +     +
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI-----RGLLARETAFSGADII--L 1058

Query: 719  SDILAEGL 726
             D+LA G 
Sbjct: 1059 KDLLARGF 1066



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/401 (21%), Positives = 171/401 (42%), Gaps = 14/401 (3%)

Query: 187  VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            +F  +   +  ++PN       ++ +F+  + ++ +    +M   G  P+  T   +I G
Sbjct: 669  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 247  LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 +++ +  +L EM +      L+ Y  ++    +   +  +  L++ +    ++PD
Sbjct: 729  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 307  ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +LT   L+  +CE+  L+    IL+  I  G+      F  ++   C  G+    +N+  
Sbjct: 789  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE----INWAF 844

Query: 367  DKCGYVTSPHNALLECCCNA--------GKFFLAKCILEKMADRKIADCDSWNIP-IRWL 417
            D    +TS   +L +  C+A         +F  ++ +L +M+ + I+      I  I  L
Sbjct: 845  DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            C   +I+ A+ +   M+   + P     SA V    K    ++A  + R +    LV   
Sbjct: 905  CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             S++ L+   C+   + EA+E+   MS  G  L   S+N+LI GLC    +  A  L   
Sbjct: 965  ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024

Query: 538  AYSSGTSYTTSTYTKIMLGLVKLQRA-KDLLVVLAQMLVEG 577
                G     +TY  ++ GL+  + A     ++L  +L  G
Sbjct: 1025 MKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1065



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 1/206 (0%)

Query: 147  VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
            +N A  ++  M S G  L  D  + ++  +    R F +   V  EM K GI P      
Sbjct: 840  INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR-FQESRMVLHEMSKQGISPESRKYI 898

Query: 207  YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
             L+  L     I++A      M     CP +     +++ L    + D++  +L  M  +
Sbjct: 899  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958

Query: 267  GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
             +   ++ +T ++ + C+   + EA+ L  +M    L  D ++Y  LI  LC    +  A
Sbjct: 959  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018

Query: 327  NDILEDMIVIGLTPTDDVFVDIVRGL 352
             ++ E+M   G       +  ++RGL
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGL 1044


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 251/528 (47%), Gaps = 33/528 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +I + K   +  + + ++M   GI P+V TL  ++  L   NR++ A     ++
Sbjct: 73  FNRLLTSIAKTKH-HSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKI 131

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I+GL    ++ +++ +  +M   G Q  +  Y  +I  LC+    
Sbjct: 132 LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 191

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  P+ + +  LI+ LC++ ++ +A +I  +MI  G++P    +  +
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           + GLC++ ++            +VT+                    ++ +M D KI  D 
Sbjct: 252 IHGLCKLCEWK-----------HVTT--------------------LMNEMVDSKIMPDV 280

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            + N  +  LC+   + +A++++  M+   V P+  TY+A + G C     + A++VF  
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +  V + ISY+ L+ G C+++ + +A+ +F  MS+   + ++ ++N LI+GLC + +
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  AI L     + G      TY  +   L K +     + +L  +       D++ Y  
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           ++  M    +L+D    F+ +   GL P+  T   ++HGL     L   S   +++  + 
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
              +   YN++  G  +     +   LL+ ML +G+  D +T  LLVG
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 223/514 (43%), Gaps = 16/514 (3%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F RM  K   P++  F  ++  +         +S+  +M   GI  ++   
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I  LC  N+++ A      +  L   PD  T+  LI  LC   ++ +A  + + MI 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG    ++  L    +  C       + L++  C   +   
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  I  +M  + I+ +  ++N  I  LC+  E +    L+  MV S ++PD  T +  V 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  V   +  + +  + ++Y+ L++G C   ++  AV+VF  M    C  
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  S+N LI G C ++ VDKA+ L         +  T TY  ++ GL  + R +D + + 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D+  Y  L   + +   L         +  +   PD +   ++L G+   
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S     +   YNI+I+GL K+GL ++AS L   M   G  P+  T+
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 691 GLLVGS-----------SVGEEIDSRRFAFDSSS 713
            L+               + EE+ +R F+ D S+
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVST 562



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 141/300 (47%), Gaps = 1/300 (0%)

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A     RM+     P    ++  +    K  ++   L + RQ+ +  +  D  + + ++
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
             LC + ++  A      + K G    +++F  LI GLCV  K+ +A+ L       G  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL K+      + +L  M    C  +V  +  LI S+ +  ++ +    
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ M+  G+ P+  T  SL+HGL    +   V++ +N++V    + D    N +++ L K
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILA 723
           EG+ ++A  ++D+M+ +G  P+  T+  L+ G  +  E+D     FD+    D V+++++
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352



 Score = 38.9 bits (89), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 48/121 (39%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P++     +L+ +     +E A D F  +  KG  PN  T+ I+I GL     + ++  +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM   G       Y  I     R N+    I L + M A     D  T   L+  L +
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 572

Query: 320 N 320
           +
Sbjct: 573 D 573


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 227/506 (44%), Gaps = 42/506 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV++G  P+  T N L+     TN+++ A D F +M  +G   +  ++  +I+G     R
Sbjct: 37  MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGR 96

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D++V + GEM     Q ++  Y  ++  LC+  + EE + + + M+ L   P    Y  
Sbjct: 97  IDEAVELFGEM----DQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAA 152

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DK 368
           +++  C   +  +A ++L++M   GL P       ++   C+ G+  +++  LE      
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
           C      +NAL++  CN GK                                  + KA  
Sbjct: 213 CKPNVWTYNALVQGFCNEGK----------------------------------VHKAMA 238

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL +M V  V PD  TY+  + G+C   + E A R+ R +    L+ D  +Y+ L+  LC
Sbjct: 239 LLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 298

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  +  +A  +F  +   G   ++ +FN LI GLC   KVD A +      S+G +  T 
Sbjct: 299 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTY 358

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY+  +  L K++ +++ L  + +ML +        Y I+I  + ++      A  +  M
Sbjct: 359 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           V +G  PD  T  + +       +L+   + + ++  +   +D+  YN L++G    G T
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV 694
             A  +L  M     VP+  T+ +L+
Sbjct: 479 DHAVSILKQMTSVASVPNQFTYFILL 504



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 142/649 (21%), Positives = 271/649 (41%), Gaps = 55/649 (8%)

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           TN +  A  +F  + + + F     +Y  +I      G ++E   L   M +   P++  
Sbjct: 59  TNQVDVARDLFDKMPL-RGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ---PDM-H 113

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
              +LV       R    + +L  M   G++ S   +  V+     E++   +   + +E
Sbjct: 114 MYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKA-KEAEEMLQE 172

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ P V T   ++    +  R+  AL     M  +GC PN  T+  +++G     +
Sbjct: 173 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 232

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V  ++++L +M   G+  +   Y  +I   C +  +E A RL ++M    L+ D+ TY  
Sbjct: 233 VHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 292

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN LC++ R D A  + + +   G+ P    F  ++ GLC+ GK D +  FLE      
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLE------ 346

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                          K   A C           D  +++  I  LC+ +  ++    +G 
Sbjct: 347 ---------------KMVSAGC---------TPDTYTYSSFIEHLCKMKGSQEGLSFIGE 382

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+   V P    Y+  +    K  NY    R + ++ +     D ++Y+  +   C   +
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 442

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA  V   MSKNG ++ + ++N L+ G   + + D A+ +     S  +     TY  
Sbjct: 443 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++  LV+++  +D+L +    + +                    +L D    F+VM K  
Sbjct: 503 LLRHLVRMRLVEDVLPLTPAGVWKAI------------------ELTDVFGLFDVMKKNE 544

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
            +P+  T  S+L G ++  +    +S ++ +  DS  L+  +Y  L+    K      A 
Sbjct: 545 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 604

Query: 673 YLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDSSSFPDSVSD 720
            L+  M+  G++P   ++  L+   + E + D  +  F +S + D   D
Sbjct: 605 VLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 653



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 135/554 (24%), Positives = 235/554 (42%), Gaps = 33/554 (5%)

Query: 150 AMRVLVNMNSGGFKLSVDVFN-VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
           A+R L  M   G++     FN +++G     +   A  +F   +M   G   +V +   L
Sbjct: 30  ALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLF--DKMPLRGFAQDVVSYAAL 87

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           +E   ET RI+ A++ F  M +    P+   +  ++KGL    R ++ + +L  M +LG 
Sbjct: 88  IEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGW 143

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           +     Y  ++   C E K +EA  + + M    L P  +T   +IN  C+  R+ DA  
Sbjct: 144 RPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALR 203

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CGYVTSP----HNALLEC 382
           +LE M + G  P    +  +V+G C  GK  +++  L     CG   +P    +N L+  
Sbjct: 204 VLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG--VNPDAVTYNLLIRG 261

Query: 383 CCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G    A  +L  M  D  IAD  ++N  I  LC++    +A  L   +    + P+
Sbjct: 262 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 321

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T+++ + G CK    + A +   ++ +     D+ +YS  +E LC+++   E +    
Sbjct: 322 AVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 381

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M +     S+ ++ I+I+ L   R      R      SSG +    TYT  M       
Sbjct: 382 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 441

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R  +   VL +M   G  +D  AY  L+   +   +          M     VP++ T  
Sbjct: 442 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 501

Query: 622 SLLHGLAD----GSQLHLVSSGINKLVSDSEVL-------------DSSMYNILINGLWK 664
            LL  L         L L  +G+ K +  ++V              +S  Y+ ++ G  +
Sbjct: 502 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 561

Query: 665 EGLTSQASYLLDLM 678
           +G T +A+ L+ LM
Sbjct: 562 DGRTEEATSLVSLM 575



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 128/631 (20%), Positives = 250/631 (39%), Gaps = 55/631 (8%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR 152
           Q     Y  ++  L  AG  EE   + + M +  +     A  ++V       +   A  
Sbjct: 109 QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEE 168

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           +L  M   G    V     V+ A  +E R  +D + V + M   G  PNV T N L++  
Sbjct: 169 MLQEMFEKGLAPCVVTCTAVINAYCKEGR-MSDALRVLELMKLRGCKPNVWTYNALVQGF 227

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
               ++  A+    +M   G  P++ T+ ++I+G   +  ++ +  +L  M   G+  + 
Sbjct: 228 CNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 287

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y  +I  LC++ + ++A  LF  +    + P+ +T+  LIN LC++ ++D A   LE 
Sbjct: 288 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEK 347

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           M+  G TP    +   +  LC++    E ++F+ +       P                 
Sbjct: 348 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV-------------- 393

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
                           ++ I I  L +           G MV S   PD  TY+  +   
Sbjct: 394 ----------------NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 437

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C      +A  V  ++S   + +D+++Y+ L++G   + +   AV +   M+      + 
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT-----------------TSTYTKIML 555
            ++ IL+  L  MR V+  + L           T                 + TY+ I+ 
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 557

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  +  R ++   +++ M  +  +L+ + Y  L+    +  +  D  +    M++ G +P
Sbjct: 558 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 617

Query: 616 DRETMLSLLHGL-ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
              +   LL GL  +G         +N    D    D  ++ ++I+GL K+G +  +  +
Sbjct: 618 HLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSP-DEIVWKVIIDGLIKKGHSDISREM 676

Query: 675 LDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           + ++      P   T+ +L      EE+  R
Sbjct: 677 IIMLERMNCRPSHQTYAMLT-----EELPDR 702



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 4/288 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  IR LC   ++  A   L  MV S   PD  T+++ ++G C+    + A  +F ++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    D +SY+ L+EG C+  +I EAVE+F  M +    +    +  L+ GLC   + 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHM----YAALVKGLCKAGRG 128

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++ + +       G   +T  Y  ++      ++AK+   +L +M  +G A  V     +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I +  ++ ++ D      +M   G  P+  T  +L+ G  +  ++H   + +NK+     
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             D+  YN+LI G   +G    A  LL LM G G + D  T+  L+ +
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 296


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 221/483 (45%), Gaps = 57/483 (11%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M K G  PN  T+  ++ GL    R+ D+ ++   M   G   ++  Y  ++   C+  +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA+++F        +PD +TY  LIN  C+  +LD+A  IL+ M+   L P    +  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN-------AGKFFLAKCIL 396
           +V GLC+ G+ DE+   + DK G+  SP    ++ L+   C        A K F +  +L
Sbjct: 121 LVNGLCKNGRVDEARMLIVDK-GF--SPNVITYSTLISGLCRELRGVSEALKLFGS--VL 175

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           ++  + ++    ++NI I  L + + + +A+EL   +V   + PD  TY+ F+ G CK  
Sbjct: 176 KQGYEPEVP---TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 232

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             EDAL + + +  +  V D +S++ ++ GLC+ +++ EA  +   M   GCS ++ SFN
Sbjct: 233 RVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ---RAKDLLVVLAQM 573
            LI G C   K  KA+         G   T  TY  ++ GL K +   R K+ + +   M
Sbjct: 293 TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 352

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           + +G   DV  Y  LI  + +  KL D       M   G +P+  T              
Sbjct: 353 IEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT-------------- 398

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                                YN LI+GL       +A  L   M+ KG VPD  T+G +
Sbjct: 399 ---------------------YNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTI 437

Query: 694 VGS 696
           + +
Sbjct: 438 ISA 440



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 209/436 (47%), Gaps = 17/436 (3%)

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           MR     P+ +TY  L++ LC   R+ DA  + E MI  G +P    +  ++ G C+VG+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 358 FDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNI 412
            DE++   +   K G+V     +NAL+   C A K   A+ IL++M ++  + D  ++N 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK-LCNYEDALRVFRQVSAQ 471
            +  LC+N  + +A  L+   V     P+  TYS  + G C+ L    +AL++F  V  Q
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               +  +Y+ L++GL + +++ EA E+F  + K+G    + ++ + I GLC   +V+ A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + +       G      ++  ++ GL K +R  +  V+L+ M  +GC+ +  ++  LI  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI---NKLVSDSE 648
                K K     F  M+K G+ P   T   L+ GL    Q   +   I   + ++    
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-EEIDSRRF 707
           V D   Y+ LI+GL K G    A  LL  M  KG +P+  T+  L+    G E++D    
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 708 AF----DSSSFPDSVS 719
            F    +    PD+++
Sbjct: 418 LFVAMVEKGCVPDTIT 433



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 195/407 (47%), Gaps = 19/407 (4%)

Query: 57  LRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           ++   SPD      L+       +L  ALKIF   ++++ F     TY  +I     A  
Sbjct: 37  IKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDG-AVKRGFVPDVVTYNALINGFCKADK 95

Query: 112 VEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           ++E + + Q MV E   P+V     SLV     + RV+ A  ++V+    GF  +V  ++
Sbjct: 96  LDEAQRILQRMVSENLVPDVV-TYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYS 151

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            ++  +  E RG ++ + ++  ++K G  P V T N L++ L + +R+  A + F  + K
Sbjct: 152 TLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 211

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            G  P++ T+ + I GL    RV+D++ +L +M + G   ++  +  +I  LC+E +++E
Sbjct: 212 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 271

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A  L   M A    P+ +++  LI   C   +   A    ++M+  G+ PT   +  +V 
Sbjct: 272 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 331

Query: 351 GLCEV---GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           GLC+    G+  E++   +        P    ++AL++    AGK   A+ +L  M  + 
Sbjct: 332 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 391

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            I +  ++N  I  LC  E++ +A EL   MV    VPD  TY   +
Sbjct: 392 CIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/537 (23%), Positives = 241/537 (44%), Gaps = 39/537 (7%)

Query: 128  PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE--------- 178
            PNV    I L+ ++ +  R+  A R+L  M+  G    +  +N ++  + +         
Sbjct: 471  PNVVVYSI-LIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529

Query: 179  -----EKRG-------FADFVFVYK-------------EMVKAGIVPNVDTLNYLLEVLF 213
                 + RG       F  F+  Y              EM+  G++PN      L+   F
Sbjct: 530  YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589

Query: 214  ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
            +   +  AL  FRR+H  G  P+ +T    I GL+ N RV +++ +  E+ + G+  ++ 
Sbjct: 590  KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649

Query: 274  FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
             Y+ +I   C++ ++E+A  L   M    + P+   Y  L++ LC++  +  A  + + M
Sbjct: 650  TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709

Query: 334  IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
               GL P    +  ++ G C+     E+ +   +       PH    NAL+  CC  G  
Sbjct: 710  PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769

Query: 390  FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
              A  +  +M  +  A   S+N  I   C++ +I++A +L   M+   ++PD  TY+  +
Sbjct: 770  EKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 829

Query: 450  LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
               CK    E+A  +F+++  ++L++D+++Y+ L+ G  ++ + +E   +F  M   G  
Sbjct: 830  DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVK 889

Query: 510  LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
                ++ ++IY  C    + +A +LR      G     + +  ++  L K +   +   +
Sbjct: 890  PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 949

Query: 570  LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
            L +M   G    + A   L++S  E  K+ +    F  +   GLVPD  T++ L++G
Sbjct: 950  LDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/641 (23%), Positives = 277/641 (43%), Gaps = 44/641 (6%)

Query: 96  ADTYCKMILKLGL--AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV 153
            +TY   I+  GL  A  + E +   + M K        A  +L+  F+    ++  +R+
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 355

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
              M S G  +++  +NV++  + +  +       + K MV  G  PN  T   L+E   
Sbjct: 356 KDVMVSCGIPINLITYNVLIHGLCKFGK-MEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
             + +  AL+    M K+   P++ ++  +I GL     +  +  +L +M   G++  + 
Sbjct: 415 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 474

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y+ +I     E ++EEA RL   M    + PD   Y  +I+CL +  ++++A+  L ++
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN----AGKF 389
              GL P    F   + G  + GK  E+  + ++   +   P+N L     N    AG  
Sbjct: 535 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 594

Query: 390 FLAKCILEKM--------------------------------ADRK----IADCDSWNIP 413
             A  I  ++                                ++ K    + D  +++  
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I   C+  E+ KA+EL   M +  + P+   Y+A V G CK  + + A ++F  +  + L
Sbjct: 655 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             DS++YS +++G C+ E + EA  +F  M   G    S  +N L++G C    ++KA+ 
Sbjct: 715 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L       G + TT ++  ++ G  K  + ++   +  +M+ +    D   Y  +I    
Sbjct: 775 LFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 833

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           +  K+++  L F  M +  L+ D  T  SL++G     Q   V +   K+V+     D  
Sbjct: 834 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            Y ++I    KE    +A  L D ++GKG +   T H LL+
Sbjct: 894 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 934



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/554 (23%), Positives = 244/554 (44%), Gaps = 6/554 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           + GA RVL+ M+  G   +  ++++V+  + +      + V + + M + G+VPN  T  
Sbjct: 244 LRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD-IDEAVELKRSMGEKGLVPNTYTYT 302

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            +   L    R+  A   F  M K G  P+      +I G +    +D+ + I   M   
Sbjct: 303 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 362

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           GI + L  Y  +I  LC+  K+E+A  + K M  L   P+  T+  LI   C    +  A
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRA 422

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
            ++L++M    L P+   +  ++ GLC       +   LE        P    ++ L+  
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482

Query: 383 CCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
             + G+   A+ +L+ M+   +A D   +N  I  L +  ++ +A   L  +    + PD
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T+ AF+LG  K     +A + F ++    L+ ++  Y+ L+ G  +   + EA+ +F 
Sbjct: 543 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 602

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            +   G      + +  I+GL    +V +A+++ S     G      TY+ ++ G  K  
Sbjct: 603 RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 662

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
             +    +  +M ++G A ++  Y  L+  + +   ++     F+ M + GL PD  T  
Sbjct: 663 EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYS 722

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           +++ G      +    S  +++ S      S +YN L++G  KEG   +A  L   ML K
Sbjct: 723 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 782

Query: 682 GWVPDATTHGLLVG 695
           G+    + + L+ G
Sbjct: 783 GFATTLSFNTLIDG 796



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 219/514 (42%), Gaps = 5/514 (0%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F  VY  M+ A +  +V T  YL+  L +T  +  A      M +KG  PN   + +VI+
Sbjct: 212 FWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIE 271

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G+     +D++V +   M + G+      YT I   LCR  ++ EA   F+ M+   L P
Sbjct: 272 GMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKP 331

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D      LI+       +D+   I + M+  G+      +  ++ GLC+ GK +++   L
Sbjct: 332 DYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL 391

Query: 366 EDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN 420
           +        P++     L+E  C       A  +L++M  R  +    S+   I  LC  
Sbjct: 392 KGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC 451

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           +++  A +LL +M  S + P+   YS  ++        E+A R+   +S   +  D   Y
Sbjct: 452 KDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCY 511

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++  L +  K+ EA      +   G    + +F   I G     K+ +A +       
Sbjct: 512 NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 571

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G       YT ++ G  K     + L +  ++   G   DV+     I  + +  ++++
Sbjct: 572 HGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQE 631

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ + + GLVPD  T  SL+ G     ++       +++       +  +YN L++
Sbjct: 632 ALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD 691

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL K G   +A  L D M  KG  PD+ T+  ++
Sbjct: 692 GLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 725



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 189/425 (44%), Gaps = 39/425 (9%)

Query: 189  VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            +++ +   G++P+V T +  +  L +  R++ AL  F  + +KG  P+  T+  +I G  
Sbjct: 600  IFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 659

Query: 249  ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                V+ +  +  EM   GI   +  Y  ++  LC+   ++ A +LF  M    L PD +
Sbjct: 660  KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719

Query: 309  TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
            TY  +I+  C++  + +A  +  +M   G+ P   V+  +V G C+ G  ++++N   + 
Sbjct: 720  TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 779

Query: 368  -KCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
             + G+ T+   N L++  C + K   A  + ++M  ++I  D  ++   I W C+  ++ 
Sbjct: 780  LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 839

Query: 425  KA-----------------------------------YELLGRMVVSSVVPDCATYSAFV 449
            +A                                   + L  +MV   V PD  TY   +
Sbjct: 840  EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 899

Query: 450  LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
               CK  N  +A ++  +V  + ++     +  L+  LC+ E +TEA ++   M + G  
Sbjct: 900  YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 959

Query: 510  LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
             S ++ N L+       K+D+A R+     S G    T+T   ++ G +    ++D   +
Sbjct: 960  PSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019

Query: 570  LAQML 574
            + Q++
Sbjct: 1020 IKQLV 1024



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 144/311 (46%), Gaps = 1/311 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N+LL+     G   L   +   M D K+  D  ++   +  LC+  ++R A  +L  M  
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P+   YS  + G C++ + ++A+ + R +  + LV ++ +Y+ +  GLC+ +++ E
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNE 316

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A   F  M K G     ++ + LI G      +D+ +R++ +  S G      TY  ++ 
Sbjct: 317 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIH 376

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL K  + +    +L  M+  GC  +   +C+LI+    ++ +       + M K  LVP
Sbjct: 377 GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 436

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
              +  ++++GL     L L +  + K+       +  +Y+ILI     EG   +A  LL
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496

Query: 676 DLMLGKGWVPD 686
           D M   G  PD
Sbjct: 497 DGMSCSGVAPD 507



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/283 (19%), Positives = 121/283 (42%), Gaps = 17/283 (6%)

Query: 59   HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHT------ADTYCKMILKLGLAGNV 112
            H+   + L+       D+  A+ +F+ + +QK F  T       D YCK       +  +
Sbjct: 752  HSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDGYCK-------SCKI 803

Query: 113  EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
            +E   L Q M+ ++         +++       ++  A  +   M      L VD     
Sbjct: 804  QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER--NLIVDTVTYT 861

Query: 173  LGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
                   K G +  VF ++++MV  G+ P+  T   ++    + + +  A      +  K
Sbjct: 862  SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921

Query: 232  GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
            G        +++I  L     + ++  +L EM +LG++  L+    ++       K++EA
Sbjct: 922  GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEA 981

Query: 292  IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
             R+F+ +++L L+PD  T  +L+N    +   +DA ++++ ++
Sbjct: 982  TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 246/559 (44%), Gaps = 47/559 (8%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           +N A+ ++    S GF   V  +N +L A++  K+       ++KEMV++G+ PNV T N
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+        +E  L  F  M + GC PN  T+  +I       ++ ++  +L  M   
Sbjct: 208 ILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+   L  Y  +I  LCRE +++E   + + M     +PD +T+  LIN  C       A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
             +  +M+  GL+P    +  ++  +C+ G  + ++ F                      
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF---------------------- 365

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                    L++M DR +  +  ++   I    +   +++AY+++  MV +   P   TY
Sbjct: 366 ---------LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +A + G C L   EDA  + +++  +  + D +SYS ++ G C+ +++ +A ++   M  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G S   ++++ LI GLC  R++ +   L     S G      TYT ++           
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDK 536

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR-------- 617
            L +  +M+ +G + D+  Y +LI   ++Q++ K+       ++    VP+         
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596

Query: 618 -------ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
                  ++ L+L+ G      ++     +  ++     L+  +YN++I+G  K G   +
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656

Query: 671 ASYLLDLMLGKGWVPDATT 689
           A  L   ML  G+ P + T
Sbjct: 657 AYNLYKEMLHSGFAPHSVT 675



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 236/549 (42%), Gaps = 61/549 (11%)

Query: 197 GIVPNVDTLNYLLEVLFETNR-IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           G +P V + N +L+ +  T + ++ A   F+ M + G  PN  T+ I+I+G      ++ 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +   GEM   G    +  Y  II   C+  K+ EA +L ++M    L P+ ++Y  +IN
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC   ++ + ++ILE+M      P    F  ++ G C VG F +++    +      SP
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               +  L+   C AG    A   L++M DR +  +  ++   I    +   +++AY+++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV +   P   TY+A + G C L   EDA  + +++  +  + D +SYS ++ G    
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF--- 458

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
                                           C  ++++KA +L+    + G S   +TY
Sbjct: 459 --------------------------------CRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + ++ GL K +R  ++  +  +ML  G   D   Y  LI +   +  L       + M++
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN---------- 660
            G  PD  T   L++G    S+       + KL+ +  V +   YN LI+          
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 661 -----GLWKEGLTSQASYLLDLMLGKGW-----VPDATTHGLLVGSSVGEEIDSRRFAFD 710
                G   +GL ++A  +L+ ML KG+     V +   HG     ++ +  +  +    
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666

Query: 711 SSSFPDSVS 719
           S   P SV+
Sbjct: 667 SGFAPHSVT 675



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 205/481 (42%), Gaps = 33/481 (6%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR-VDDSVSILGEMFDLGIQLELSF 274
           N I  AL         G  P   ++  ++  +I   + V  +  I  EM + G+   +  
Sbjct: 146 NLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYT 205

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I   C    LE  +  F  M     +P+ +TY  +I+  C+  ++ +A  +L  M 
Sbjct: 206 YNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
           + GL P    +  ++ GLC  G+  E+                                 
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSE------------------------------- 294

Query: 395 ILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           ILE+M+ R+ + D  ++N  I   C      +A  L   MV + + P+  TY+  +   C
Sbjct: 295 ILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMC 354

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K  N   A+    Q+  + L  +  +Y+ L++G  Q   + +A ++   M +NG + +  
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI G C++ +++ A  L       G      +Y+ I+ G  + Q  +    +  +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           + +G + DV  Y  LIQ + +Q +L +    F  M+  GL PD  T  SL++       L
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  ++++      D   YN+LING  K+  T +A  LL  +L +  VP+  T+  L
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 694 V 694
           +
Sbjct: 595 I 595



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 206/462 (44%), Gaps = 17/462 (3%)

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTC---------IIPMLCRENKLEEAIRLFKMM 298
           +A   V ++V   GE  DL   L+ S+Y C         ++    R N + +A+ +  + 
Sbjct: 101 LAEEVVVNTVDETGE--DLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLA 158

Query: 299 RALDLMPDELTYEELINCLCENLR-LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           ++   MP  L+Y  +++ +    + +  A  I ++M+  G++P    +  ++RG C  G 
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218

Query: 358 FDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
            +  + F      + C      +N +++  C   K   A  +L  MA + +  +  S+N+
Sbjct: 219 LEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC   ++++  E+L  M     VPD  T++  + G C + N+  AL +  ++    
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  + ++Y+ L+  +C+   +  A+E    M   G   +  ++  LI G      + +A 
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           ++      +G + T  TY  ++ G   L R +D   +L +M+  G   DV +Y  +I   
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
               +L+        MV  G+ PD  T  SL+ GL    +L  V     +++S     D 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             Y  LIN    EG   +A  L D M+ KG+ PD  T+ +L+
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 103/261 (39%), Gaps = 40/261 (15%)

Query: 441 DCATYSA---FVLGKCKLCNY-EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            C + SA    V+  C   N    AL +     +   +   +SY+ +++ + + ++  + 
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186

Query: 497 VE-VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
            E +F  M ++G S +  ++NILI G C    ++  +        +G      TY  I+ 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              KL++  +   +L  M ++G   ++ +Y ++I  +  + ++K+ +     M K   VP
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           DR T                                   +N LING    G   QA  L 
Sbjct: 307 DRVT-----------------------------------FNTLINGYCNVGNFHQALVLH 331

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             M+  G  P+  T+  L+ S
Sbjct: 332 AEMVKNGLSPNVVTYTTLINS 352


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 252/545 (46%), Gaps = 14/545 (2%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKR--GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           G   ++ +V   ++ A  E  R    AD V    EM   G+   V+T N++L V  ET  
Sbjct: 105 GSLPMAHEVMRGMVAAFGEAGRLPEAADMVL---EMRSHGLPLCVETANWVLRVGLETGS 161

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
              A   F  M + G CP+ R+F  ++       +V++  ++L  M+  G  L+ +  T 
Sbjct: 162 FVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTV 221

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  LC + + ++    F+ M      P+ + Y   I+ LC+   +  A  +LE+M+  G
Sbjct: 222 VVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 281

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVN-FLE--DKCGYVTSPHN--ALLECCCNAGKFFLA 392
           L P       ++ GLC++G  + +   FL+      Y  + H    ++   C  GK   A
Sbjct: 282 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 341

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + +L +M ++ +  + +++   I   C+     +A+EL+ +M     +P+  TY+A + G
Sbjct: 342 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 401

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK    ++A +V R  ++Q L  D I+Y+ L+   C+   IT A+++F  M +NGC   
Sbjct: 402 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 461

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++  LI   C  R+++++ +        G   T  TYT ++ G  K+ R+   L V  
Sbjct: 462 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE 521

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M+  GC  D   Y  LI  + ++++L++    +  M+   LVP   T ++L        
Sbjct: 522 RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRRE 581

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +  +  S +++L    +V      ++++  L   G    AS  L  +L + +  D  T+ 
Sbjct: 582 KTSIAVSVLDRLDKRQQV---HTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYT 638

Query: 692 LLVGS 696
             + S
Sbjct: 639 GFINS 643


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 278/593 (46%), Gaps = 8/593 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYR 146
           I K  +    TY  +I  L  A  V+  EG+ Q+M+ K   P+V     +++        
Sbjct: 261 IDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV-VTYNTIIDGLCKAQA 319

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A  VL +M     K  +  +N ++   +     + + V   +EM   G+ P+V T +
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE-WKEVVRRLEEMYARGLDPDVVTYS 378

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LL+ L +  +   A   F  M +KG  PN   + I++ G  A   + D   +L  M   
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           GI      +  ++    ++  ++EA+ +F  M    L PD +TY  LI+ LC+  R+DDA
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLEC 382
                 MI  G+TP   VF  +V GLC V +++++     +       P+    N ++  
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            CN G+  +A+ +++ M    +  +  S+N  I   C      +A +LL  MV   + PD
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +Y   + G CK    ++A  +FR++  + +   +++YS +++GL    + +EA E++ 
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M K+G      ++NI++ GLC    VD+A ++     S        T+T ++  L K  
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R KD + + A +   G   +V  YCI+++++ ++  L +    F  M K+G  PD   + 
Sbjct: 739 RKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLN 798

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           +++  L    ++    + ++K+   +  L++S  ++LI+   +E   + A  L
Sbjct: 799 AIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 144/617 (23%), Positives = 263/617 (42%), Gaps = 88/617 (14%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++++  V N +L  + + KR       + + M + G +PNV + N LL+ L    R+E 
Sbjct: 120 GWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEE 179

Query: 221 ALDQFRRMHKKG---CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           AL+    M + G   C PN  T+  +I GL     VD +  +L  M D G++L++  Y+ 
Sbjct: 180 ALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYST 239

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II  LC+   ++ A  + + M    + PD +TY  +I+ LC+   +D A  +L+ MI  G
Sbjct: 240 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG 299

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           + P    +  I+ GLC+    D +   L+        P    +N L+    + G++    
Sbjct: 300 VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             LE+M  R +  D  ++++ + +LC+N +  +A ++   M+   + P+   Y   + G 
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419

Query: 453 CK-----------------------------LCNY------EDALRVFRQVSAQSLVLDS 477
                                          LC Y      ++A+ +F ++S   L  D 
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDV 479

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y  L++ LC++ ++ +AV  F  M  +G + +S  FN L+YGLC + + +KA  L   
Sbjct: 480 VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE-----GCALDVEAYCILIQSM 592
            +  G       +  IM  L    +     V++AQ L++     G   +V +Y  LI   
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQ-----VMVAQRLIDSMERVGVRPNVISYNTLIGGH 594

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL--------HLVSSGIN--- 641
               +  + A   +VMV  GL PD  +  +LL G     ++         ++  G+    
Sbjct: 595 CLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGA 654

Query: 642 ------------------------KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
                                    ++   +  D   YNI++NGL K     +A  +   
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714

Query: 678 MLGKGWVPDATTHGLLV 694
           +  K   P+  T  +++
Sbjct: 715 LCSKDLRPNIITFTIMI 731



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 233/522 (44%), Gaps = 40/522 (7%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSR 238
           + GFA F  +    +K G   N   +N LL  L +  R++ A+D   RRM + GC PN  
Sbjct: 107 EHGFAAFGLI----LKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVV 162

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLG---IQLELSFYTCIIPMLCRENKLEEAIRLF 295
           +   ++KGL    RV++++ +L  M + G       +  Y  II  LC+   ++ A  + 
Sbjct: 163 SCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVL 222

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           + M    +  D +TY  +I+ LC+   +D A  +L+ MI  G+ P    +  I+ GLC+ 
Sbjct: 223 QHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKA 282

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
              D                                A+ +L+ M D+ +  D  ++N  I
Sbjct: 283 QAVDR-------------------------------AEGVLQHMIDKGVKPDVVTYNTII 311

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC+ + + +A  +L  M+   V PD  TY+  + G      +++ +R   ++ A+ L 
Sbjct: 312 DGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLD 371

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            D ++YS L++ LC+  K TEA ++F CM + G   + + + IL++G      +     L
Sbjct: 372 PDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDL 431

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             L  ++G S     +  ++    K     + + + ++M   G + DV  Y ILI ++ +
Sbjct: 432 LDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCK 491

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             ++ D  L FN M+  G+ P+     SL++GL    +         ++       +   
Sbjct: 492 LGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVF 551

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +N ++  L  EG    A  L+D M   G  P+  ++  L+G 
Sbjct: 552 FNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGG 593



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 140/623 (22%), Positives = 254/623 (40%), Gaps = 62/623 (9%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPN 201
           V+ A  VL +M   G KL V  ++ ++  +     V+   G      V + M+  G+ P+
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEG------VLQHMIDKGVKPD 268

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           V T N +++ L +   ++ A    + M  KG  P+  T+  +I GL     VD +  +L 
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            M D  ++ ++  Y C+I       + +E +R  + M A  L PD +TY  L++ LC+N 
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNG 388

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           +  +A  I   MI  G+ P   ++  ++ G    G   +  + L+       SP+N +  
Sbjct: 389 KCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFN 448

Query: 382 C--CCNAGKFFL--AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
              C  A K  +  A  I  +M+   ++ D  ++ I I  LC+   +  A     +M+  
Sbjct: 449 IVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND 508

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVF-------------------------RQVSAQ 471
            V P+   +++ V G C +  +E A  +F                          QV   
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA 568

Query: 472 SLVLDS----------ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             ++DS          ISY+ L+ G C   +  EA ++   M   G      S++ L+ G
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            C   ++D A  L       G +    TY+ I+ GL   +R  +   +   M+  G   D
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWD 688

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  Y I++  + + N + +    F  +    L P+  T   ++  L  G +         
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFA 748

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE- 700
            + S   V +   Y I++  + +EGL  +   L   M   G  PD+     ++ S +G  
Sbjct: 749 SIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRG 808

Query: 701 ----------EIDSRRFAFDSSS 713
                     +ID   F+ ++S+
Sbjct: 809 EIMRAGAYLSKIDEMNFSLEAST 831


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 241/534 (45%), Gaps = 65/534 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S  FS  NH         L++M        +  FN +LGA+ + KR F D + +YK M  
Sbjct: 74  SEAFSVFNH---------LIDMQP---TPPISSFNTLLGAVAKIKRYF-DVISLYKRMSL 120

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+  TLN L+      N+++  L     M ++G  PN+ TF  ++KGL   SR+ +
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180

Query: 256 SVSILGEMFDLG-----------------------------------------IQLELSF 274
           +  +L +M  +G                                         I+  L  
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVC 240

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  II  LC++  +++   LF  M+   + PD + Y  +I+ +C   R + A  +  +M+
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G+ P    F  ++  LC+ GK +E+ + L+       SP    +N L++  C  G+  
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A+ +   M  + I  D  S+N+ I   C++  + +A +L   M+   ++P   TY+  +
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G  +     DA  +F ++    L  +S +Y+ L++GLC+   ++EA+E+F  +  +   
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDL 566
            S   FN LI GLC  RK++ A  L +     G      TYT ++ GL K   L+ AKDL
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            + + +   +GCA ++  +  L++   + ++++        M +    PD  T+
Sbjct: 541 FLGMEE---KGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTI 591



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 117/517 (22%), Positives = 226/517 (43%), Gaps = 11/517 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  ++     P + + N LL  + +  R    +  ++RM   G  P+  T  I+I    
Sbjct: 79  VFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYC 138

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             ++VD  +++LGEM   G       +T ++  LC  +++ EA  L + M  +   P+ +
Sbjct: 139 NLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVV 198

Query: 309 TYEELINCLCENLRLDDANDILEDMI------VIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           TY  L+N LC       A  + E+M+       + + P    +  I+  LC+ G  D+  
Sbjct: 199 TYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGK 258

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
               +  G   SP    +++++   C+ G++  AK +  +M D  +  +  ++N+ I  L
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDAL 318

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+  ++ +A  LL  M+     PD  TY+  + G C     +DA  +F  + ++ +  D+
Sbjct: 319 CKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDA 378

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           +SY+ L+ G C+  ++ EA +++  M       +  ++N L+ GL    KV  A  L   
Sbjct: 379 VSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGE 438

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
                 +  + TY  ++ GL K     + + +   +        ++ +  LI  + +  K
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++     FN +   GL P+  T   ++HGL    QL         +       +   +N 
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L+ G  +     +   LL  M  K + PDA+T  ++V
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 204/458 (44%), Gaps = 16/458 (3%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
              SLV       R++ A  +L  M   G++ +V  +  +L  +          V +++E
Sbjct: 164 TFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLA-VKLHEE 222

Query: 193 MVKAG------IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           M+         I PN+     +++ L +   I+   + F  M  +G  P+   +  +I G
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           +    R + +  +  EM D G+   +  +  +I  LC+  K+EEA  L K+M      PD
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI-VRGLCEVGKFDESVN-F 364
             TY  LI+  C   R+DDA D+   M   G+  TD V  ++ + G C+ G+  E+   +
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIE-TDAVSYNVLINGYCKSGRMVEAKKLY 401

Query: 365 LEDKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMA--DRKIADCDSWNIPIRWLCE 419
            E  C  +      +N LL      GK   A  +  +M   D     C ++NI +  LC+
Sbjct: 402 REMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC-TYNILLDGLCK 460

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N  + +A EL   +      P    ++  + G CK    E A  +F ++S + L  + I+
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ ++ GLC+  ++  A ++F  M + GC+ +  +FN L+ G C   ++ K + L     
Sbjct: 521 YTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMA 580

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
               S   ST + ++  L K ++ ++ L +L     +G
Sbjct: 581 EKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 197/455 (43%), Gaps = 19/455 (4%)

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++ S+   + D+     +S +  ++  + +  +  + I L+K M  + L PD +T   LI
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV 372
           NC C   ++D    +L +M+  G +P    F  +V+GLC   +  E+   L    + GY 
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194

Query: 373 TS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRW-----------LCE 419
            +   +  LL   C  G   LA  + E+M +        + + I+            LC+
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGN----GGFGVTIKPNLVCYCTIIDSLCK 250

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           +  I K  EL   M    + PD   YS+ + G C    +E A  +F ++  + +  + ++
Sbjct: 251 DGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVT 310

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           ++ L++ LC+  K+ EA  +   M + G S  + ++N LI G C+  ++D A  L     
Sbjct: 311 FNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSME 370

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S G      +Y  ++ G  K  R  +   +  +M+ +     V  Y  L+  +  + K++
Sbjct: 371 SKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVR 430

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           D    F  M    L P+  T   LL GL   + L       + L +        ++N LI
Sbjct: 431 DAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI 490

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +GL K      A  L + +  +G  P+  T+ +++
Sbjct: 491 DGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 21/306 (6%)

Query: 84  KWVSIQKRFQHTAD--------TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           +W   +  F    D        T+  +I  L  AG +EE   L + M++           
Sbjct: 288 RWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYN 347

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFV 189
           +L+  F    R++ A  + V+M S G +     +NV++      G +VE K+       +
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKK-------L 400

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y+EM+   I+P V T N LL  LF   ++  A + F  M      P S T+ I++ GL  
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           N+ + +++ +   + +   Q  +  + C+I  LC+  K+E A  LF  +    L P+ +T
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  +I+ LC++ +L++A D+   M   G  P    F  ++RG C+  +  + V  L++  
Sbjct: 521 YTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMA 580

Query: 370 GYVTSP 375
               SP
Sbjct: 581 EKDFSP 586


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 158/689 (22%), Positives = 288/689 (41%), Gaps = 66/689 (9%)

Query: 63  PDHLIRVLDN-TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           PD  +RVL +       AL++F+W   Q  F+ +   +C ++  L     +     + + 
Sbjct: 81  PDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMER 140

Query: 122 MVKERYPNVREALIS--------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           ++      + + LI               L++ +     V   + V   M        V 
Sbjct: 141 VINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVK 200

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
             N +L  I+ +K   +  V VY+ M + GI P + T N LL+   +  +++  LD    
Sbjct: 201 NCNRIL-RILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSE 259

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M ++GC PN  T+ ++I GL      + +  ++GEM   G+++    Y  +I     +  
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L EA+ L + M      P   TY   I  LC+  R+ DA   L DM+   L P    +  
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C +G   ++    ++       P    +N LL+  C  G                
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQG---------------- 423

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                             E+  A +L   M+   + PD  TY+  V G CK+ +   A  
Sbjct: 424 ------------------ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            F ++  + L LDS +Y+  + G  ++   + A  +   M   G       +N+++ GLC
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
            +  +++A  L     S G      TYT I+   ++  R +    +  +ML +G    V 
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y +LI   + + +L+   ++F+ M + G++P+  T  SL++GL    ++    +   ++
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645

Query: 644 VSDSEVLDSSMYNILIN-----GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
           V      +   Y ILIN     G W+E L+     L   ML +G  PD+ TH  L+   +
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALS-----LYKQMLDRGVQPDSCTHSALL-KQL 699

Query: 699 GEEIDSRRFAFDSSSFPDSVSDILAEGLG 727
           G++    +    +S+ P +  D+L++ +G
Sbjct: 700 GKDC-KLQAVHGTSTMPTAKVDLLSQTVG 727


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 222/443 (50%), Gaps = 15/443 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
            ++ +  N   ++GAM  L +M   G   +V  +  ++ A    K+   + + + +EM +
Sbjct: 30  PIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKK-LEEAMKLLEEMRE 85

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PN+ T N L++ L + + + +A D  ++M + G  PN  TF  ++ G      VDD
Sbjct: 86  RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDD 145

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +LG M   G++  +  Y+ +I  LC+  K  EA  + + M+A  + PD  TY  LI+
Sbjct: 146 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIH 205

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+  ++++A  +L  M   G TP   V+  I+   C+ GK  E+   L++      SP
Sbjct: 206 GLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP 265

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYEL 429
               +N +++  C  GK   A+ IL++M +    + D  +++  I  LC+++ + +A +L
Sbjct: 266 DVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 325

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L RM  +   PD  TY+  + G CK    E+A  + + +       + ++Y+ L+ GLC+
Sbjct: 326 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 385

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL--RSLAYSSGTSYTT 547
             K+ EA  V   M   GC  +  ++N ++ GLCV  ++ +A +L  R     +  S   
Sbjct: 386 ARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 445

Query: 548 STYTKIMLGLVK---LQRAKDLL 567
           +TY  I+  L+    +Q A+ LL
Sbjct: 446 ATYRTIVNALMSSDLVQEAEQLL 468



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 218/487 (44%), Gaps = 46/487 (9%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +AL+    M   G  P++ T   +I  +     +D ++  L  M   G    +  YT 
Sbjct: 6   LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTA 62

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    R  KLEEA++L + MR     P+ +TY  L++ LC+   +  A D+++ MI  G
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             P    F  +V G C+ G  D++   L         P    ++AL++  C + KF  AK
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182

Query: 394 CILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +LE+M A     D  +++  I  LC+ ++I +A ++L RM  S   PD   YS+ +   
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK     +A +  +++  Q    D ++Y+ +++GLC++ KI EA  +   M ++G  L  
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302

Query: 513 S-SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             +++ +I GLC    + +A +L      +G +    TYT I+ GL K  R ++   +L 
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M   GCA +V  Y  LI  + +  K+ +       M  AG  P+  T            
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT------------ 410

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML-GKGWV-PDATT 689
                                  YN ++NGL   G   +A  L+  M  G+    PDA T
Sbjct: 411 -----------------------YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAAT 447

Query: 690 HGLLVGS 696
           +  +V +
Sbjct: 448 YRTIVNA 454



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 220/492 (44%), Gaps = 45/492 (9%)

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
           N   ++ A+ +L  M S GF  + D F      I+       D       +   G  PNV
Sbjct: 2   NAGDLHAALELLEEMKSAGF--APDAFTHT--PIITAMANAGDLDGAMDHLRSMGCDPNV 57

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T   L+       ++E A+     M ++GC PN  T+ +++  L   S V  +  ++ +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M + G    +  +  ++   C+   +++A +L  +M A  + P+ +TY  LI+ LC++ +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
             +A ++LE+M   G+TP    +  ++ GLC+  K +E+   L    G   +P    +++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++   C +GK   A+  L++M  +                     RK+            
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQ---------------------RKS------------ 264

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL-DSISYSKLVEGLCQVEKITEAV 497
            PD  TY+  + G CKL    +A  +  Q+     VL D ++YS ++ GLC+ + + EA 
Sbjct: 265 -PDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 323

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           ++   M K GC+    ++  +I GLC   ++++A  L      +G +    TYT ++ GL
Sbjct: 324 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGL 383

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV--KAGLVP 615
            K ++  +   V+ +M   GC  ++  Y  ++  +    ++K+       M   +A   P
Sbjct: 384 CKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSP 443

Query: 616 DRETMLSLLHGL 627
           D  T  ++++ L
Sbjct: 444 DAATYRTIVNAL 455



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 177/418 (42%), Gaps = 44/418 (10%)

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C    L  A+ L + M++    PD  T+  +I  +     LD A D L  M   G  P  
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
             +  ++       K +E++  LE+     C      +N L++  C       A+ +++K
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 399 MADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M +   A +  ++N  +   C+   +  A +LLG MV   + P+  TYSA + G CK   
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           + +A  V  ++ A  +  D+ +YS L+ GLC+ +KI EA ++   M+ +GC+     ++ 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           +I+  C   K+ +A +          S    TY  ++ GL KL +  +  V+L QM   G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 578 CAL-DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
             L DV  Y  +I  + + + L +     + M KAG  PD  T                 
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT----------------- 340

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                             Y  +I+GL K G   +A YLL  M   G  P+  T+  L+
Sbjct: 341 ------------------YTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 380


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/537 (22%), Positives = 239/537 (44%), Gaps = 39/537 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE--------- 178
           PNV     +L+  + +  R+  A R+L  M+  G    +  +N ++  + +         
Sbjct: 382 PNVV-VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 179 -----EKRG-------FADFVFVYK-------------EMVKAGIVPNVDTLNYLLEVLF 213
                + RG       F  F+  Y              EM+  G++PN      L+   F
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +   +  AL  FR +H  G  P+ +T    I GL+ N RV +++ +  E+ + G+  ++ 
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y+ +I   C++ ++E+A  L   M    + P+   Y  L++ LC++  +  A  + + M
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
              GL P    +  ++ G C+     E+ +   +       PH    NAL+  CC  G  
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 680

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A  +  +M  +  A   S+N  I   C++ +I++A +L   M+   ++PD  TY+  +
Sbjct: 681 EKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              CK    E+A  +F+++  ++L++D+++Y+ L+ G  ++ + +E   +F  M   G  
Sbjct: 741 DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVK 800

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++ ++IY  C    + +A +LR      G     + +  ++  L K +   +   +
Sbjct: 801 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 860

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L +M   G    + A   L++S  E  K+ +    F  +   GLVPD  T++ L++G
Sbjct: 861 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 145/641 (22%), Positives = 276/641 (43%), Gaps = 44/641 (6%)

Query: 96  ADTYCKMILKLGL--AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV 153
            +TY   I+  GL  A  + E +   + M K        A  +L+  F+    ++  +R+
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
              M S G  +++  +NV++  + +  +       + K M+  G  PN  T   L+E   
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGK-MEKAAEILKGMITLGCKPNSRTFCLLIEGYC 325

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
             + +  AL+    M K+   P++ ++  +I GL     +  +  +L +M   G++  + 
Sbjct: 326 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 385

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y+ +I     E ++EEA RL   M    + PD   Y  +I+CL +  ++++A+  L ++
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA------- 386
              GL P    F   + G  + GK  E+  + ++   +   P+N L     N        
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505

Query: 387 --------------------------------GKFFLAKCILEKMADRK-IADCDSWNIP 413
                                           G+   A  +  ++ ++  + D  +++  
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I   C+  E+ KA+EL   M +  + P+   Y+A V G CK  + + A ++F  +  + L
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 625

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             DS++YS +++G C+ E + EA  +F  M   G    S  +N L++G C    ++KA+ 
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 685

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L       G + TT ++  ++ G  K  + ++   +  +M+ +    D   Y  +I    
Sbjct: 686 LFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 744

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           +  K+++  L F  M +  L+ D  T  SL++G     Q   V +   K+V+     D  
Sbjct: 745 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 804

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            Y ++I    KE    +A  L D ++GKG +   T H LL+
Sbjct: 805 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/546 (22%), Positives = 229/546 (41%), Gaps = 39/546 (7%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           L +M   G   +   + ++   +   KR   +    ++EM K G+ P+ +  + L++   
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKR-MNEAKLTFEEMQKTGLKPDYNACSALIDGFM 255

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
               I+  L     M   G   N  T+ ++I GL    +++ +  IL  M  LG +    
Sbjct: 256 REGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 315

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  +I   CRE+ +  A+ L   M   +L+P  ++Y  +IN LC    L  AN +LE M
Sbjct: 316 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 375

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
              GL P   V+  ++ G    G+ +E+   L+       +P    +NA++ C   AGK 
Sbjct: 376 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 435

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A   L                               E+ GR     + PD  T+ AF+
Sbjct: 436 EEASTYL------------------------------LEIQGR----GLKPDAVTFGAFI 461

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
           LG  K     +A + F ++    L+ ++  Y+ L+ G  +   + EA+ +F  +   G  
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 521

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               + +  I+GL    +V +A+++ S     G      TY+ ++ G  K    +    +
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 581

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             +M ++G A ++  Y  L+  + +   ++     F+ M + GL PD  T  +++ G   
Sbjct: 582 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 641

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              +    S  +++ S      S +YN L++G  KEG   +A  L   ML KG+    + 
Sbjct: 642 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF 701

Query: 690 HGLLVG 695
           + L+ G
Sbjct: 702 NTLIDG 707



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 189/425 (44%), Gaps = 39/425 (9%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +++ +   G++P+V T +  +  L +  R++ AL  F  + +KG  P+  T+  +I G  
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 570

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               V+ +  +  EM   GI   +  Y  ++  LC+   ++ A +LF  M    L PD +
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
           TY  +I+  C++  + +A  +  +M   G+ P   V+  +V G C+ G  ++++N   + 
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 690

Query: 368 -KCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
            + G+ T+   N L++  C + K   A  + ++M  ++I  D  ++   I W C+  ++ 
Sbjct: 691 LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 750

Query: 425 KA-----------------------------------YELLGRMVVSSVVPDCATYSAFV 449
           +A                                   + L  +MV   V PD  TY   +
Sbjct: 751 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 810

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              CK  N  +A ++  +V  + ++     +  L+  LC+ E +TEA ++   M + G  
Sbjct: 811 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 870

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            S ++ + L+       K+D+A R+     S G    T+T   ++ G +    ++D   +
Sbjct: 871 PSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930

Query: 570 LAQML 574
           + Q++
Sbjct: 931 IKQLV 935



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 182/450 (40%), Gaps = 35/450 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT I   LCR  ++ EA   F+ M+   L PD      LI+       +D+   I + M+
Sbjct: 212 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 271

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G+      +  ++ GLC+ GK +++   L+   G +T      L C  N+  F    C
Sbjct: 272 SCGIPINLITYNVLIHGLCKFGKMEKAAEILK---GMIT------LGCKPNSRTF----C 318

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +L                 I   C    + +A ELL  M   ++VP   +Y A + G C 
Sbjct: 319 LL-----------------IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 361

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             +   A ++  +++   L  + + YS L+ G     +I EA  +   MS +G +     
Sbjct: 362 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 421

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N +I  L    K+++A          G      T+   +LG  K  +  +      +ML
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   +   Y +LI    +   L +    F  +   G++PD +T  + +HGL    ++ 
Sbjct: 482 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 541

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 ++L     V D   Y+ LI+G  K+G   +A  L D M  KG  P+   +  LV
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 601

Query: 695 -GSSVGEEIDSRRFAFDSSS----FPDSVS 719
            G     +I   R  FD        PDSV+
Sbjct: 602 DGLCKSGDIQRARKLFDGMPEKGLEPDSVT 631



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/283 (19%), Positives = 122/283 (43%), Gaps = 17/283 (6%)

Query: 59  HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHT------ADTYCKMILKLGLAGNV 112
           H+   + L+       D+  A+ +F+ + +QK F  T       D YCK       +  +
Sbjct: 663 HSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDGYCK-------SCKI 714

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           +E   L Q M+ ++         +++       ++  A  +   M      L VD     
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER--NLIVDTVTYT 772

Query: 173 LGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
                  K G +  VF ++++MV  G+ P+  T   ++    + + +  A      +  K
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G        +++I  L     + ++  +L EM +LG++  L+  + ++       K++EA
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
            R+F+ +++L L+PD  T  +L+N    +   +DA ++++ ++
Sbjct: 893 TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 236/513 (46%), Gaps = 16/513 (3%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ AL  F RM +    P+   F   +       +    VS+  +M    +   +     
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LCR N ++ ++ +   M  L + PD +T+  LIN LC   ++ +A ++  +M+  G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAK 393
             P    +  ++ GLC+ G    +V+      ++ C      ++ +++  C       A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             L +M +R I  +  ++N  +   C   ++ +A  L   MV   V+P+  T++  V G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK     +A  VF  ++ + +  D  +Y+ L++G C    + EA +VF  M + GC+  +
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            S+NILI G C  R++D+A  L +  Y    +  T TY+ +M GL +L R K+ L +  +
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   ++  Y IL+    +   L +       M +  L P+      L+ G+    +
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L +     +KL  D    D   Y ++I GL KEGL+ +A  L   M   G++P++ ++ +
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553

Query: 693 LV-------GSSVG----EEIDSRRFAFDSSSF 714
           ++        SS      +E+  +RF+ + S+F
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTF 586



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/551 (23%), Positives = 253/551 (45%), Gaps = 47/551 (8%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           + SV  F   LG+  ++K+ ++  V +  +M    +  NV +LN L+  L   N ++ ++
Sbjct: 90  RPSVVEFGKFLGSFAKKKQ-YSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSV 148

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
               +M K G  P++ TF  +I GL    ++ ++V +  EM   G +  +  YT +I  L
Sbjct: 149 SVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGL 208

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C+      A+ +FK M      P+ +TY  +I+ LC++  ++DA + L +M+  G+ P  
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEK 398
             +  IV G C +G+ +E+    ++  G    P+      L++  C  G    A+ + E 
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M ++ +  D  ++N  +   C    + +A ++   M+     P   +Y+  + G CK   
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            ++A  +  ++  ++L  D+++YS L++GLCQ+ +  EA+ +F  M   G   +  ++ I
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQML 574
           L+ G C    +D+A++L               YT ++ G+    KL+ AK+L    +++ 
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL---FSKLF 505

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G   D+  Y ++I+ + ++    +    F  M   G +P                   
Sbjct: 506 GDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP------------------- 546

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                           +S  YN++I G  +   +S A  L+D M+GK +  + +T  +L+
Sbjct: 547 ----------------NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590

Query: 695 GSSVGEEIDSR 705
                +EI S+
Sbjct: 591 DLESQDEIISQ 601



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 207/430 (48%), Gaps = 8/430 (1%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVL 154
           A T+  +I  L   G ++E   L   MVK  + PNV  +  +++         + A+ V 
Sbjct: 163 AITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVI-SYTTVINGLCKTGNTSMAVDVF 221

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M   G K +V  ++ ++ ++ ++ R   D +    EMV+ GI PNV T N ++     
Sbjct: 222 KKMEQNGCKPNVVTYSTIIDSLCKD-RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCN 280

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             ++  A   F+ M  +   PN+ TF I++ GL     V ++  +   M + G++ ++S 
Sbjct: 281 LGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIST 340

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++   C +  + EA ++F++M      P   +Y  LIN  C++ R+D+A  +L +M 
Sbjct: 341 YNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMY 400

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
              L P    +  +++GLC++G+  E++N  ++ C Y   P    +  LL+  C  G   
Sbjct: 401 HKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD 460

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +L+ M ++K+  +   + I I  +    ++  A EL  ++      PD  TY+  +
Sbjct: 461 EALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G  K    ++A  +FR++     + +S SY+ +++G  Q +  + A+ +   M     S
Sbjct: 521 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFS 580

Query: 510 LSSSSFNILI 519
           ++ S+F +L+
Sbjct: 581 VNLSTFQMLL 590



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 93/193 (48%), Gaps = 17/193 (8%)

Query: 115 MEGLCQ--------NMVKE-----RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+GLCQ        N+ KE      +PN+   +I L+  F  H  ++ A+++L +M    
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI-LLDGFCKHGHLDEALKLLKSMKEKK 473

Query: 162 FKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            + ++  + +++ G  +  K   A  +F   ++   G  P++ T   +++ L +    + 
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELF--SKLFGDGTRPDIRTYTVMIKGLLKEGLSDE 531

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A D FR+M   G  PNS ++ ++I+G + N     ++ ++ EM      + LS +  ++ 
Sbjct: 532 AYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591

Query: 281 MLCRENKLEEAIR 293
           +  ++  + + +R
Sbjct: 592 LESQDEIISQFMR 604


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 150/646 (23%), Positives = 289/646 (44%), Gaps = 36/646 (5%)

Query: 54  IQSLRHNLSPDHLIRVLDNTN-DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           I  L    S D +  VL N   + +++L  F++VS Q+ F+    +YCK++  L      
Sbjct: 59  ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMY 118

Query: 113 EEMEGLCQNMV-----KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           +E       +V     K+R   + + L+ +       YR               F  S  
Sbjct: 119 DETRAYLNQLVDLCKFKDRGNVIWDELVGV-------YR--------------EFAFSPT 157

Query: 168 VFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           VF+++L   VE  +G   + ++V+  M K G +P++ + N LL  L +     +A   ++
Sbjct: 158 VFDMILKVYVE--KGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQ 215

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M + G  P+     I++     + +VD++   + +M +LG++  +  Y  +I       
Sbjct: 216 QMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLG 275

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV-IGLTPTDDVF 345
            +E A  + K M    +  + +TY  LI   C+  ++D+A  +L  M     L P +  +
Sbjct: 276 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 335

Query: 346 VDIVRGLCEVGKFDESVNFLED--KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMAD 401
             ++ G C  GK D++V  L++  + G  T+    N+L+   C  G+   A+ ++ +M D
Sbjct: 336 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 395

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +  D  S+N  +   C      +A+ L  +M+   + P   TY+  + G C++  ++D
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL+++  +  + +  D + YS L++GL ++E    A  ++  +   G + S  +FN +I 
Sbjct: 456 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC M K+ +A  +       G S    TY  ++ G  K         V   M  E  + 
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            +E Y  LI  + +  +L +       M   GL P+  T  +L+ G      L    S  
Sbjct: 576 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            ++  +    +  + + +++GL++ G   +A+ L+  M+  G+ PD
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/549 (23%), Positives = 239/549 (43%), Gaps = 45/549 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G + E EG+   MV         +  +L+  +      + A  +   
Sbjct: 375 NGYCK-------RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 427

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G + +V  +N +L  +      F D + ++  M+K G+ P+    + LL+ LF+  
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVG-AFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 486

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E A   ++ +  +G   +  TF  +I GL    ++ ++  I  +M DLG   +   Y 
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C+ + + +A ++   M    + P    Y  LI+ L ++ RL +  D+L +M + 
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 606

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDK----------CGYVTS---------PH 376
           GLTP    +  ++ G C+ G  D++ + + E            C  + S           
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666

Query: 377 NALLECCCNAGKFFLAKCILEK----MADRKIAD-----CDS--------WNIPIRWLCE 419
           N L++   + G F   +C L+      A +KIAD     C +        +NI I  LC+
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++  A      + +   VPD  TY   + G     N ++A R+  ++  + LV + ++
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ GLC+ E +  A  +F  + + G   +  ++N LI G C +  +D A +L+    
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G S +  TY+ ++ GL K    +  + +L QM+  G    +  YC L+Q      +++
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQ 906

Query: 600 DCALFFNVM 608
                +++M
Sbjct: 907 KIHKLYDMM 915



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/526 (22%), Positives = 220/526 (41%), Gaps = 38/526 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           + V VY+E       P V   + +L+V  E    ++AL  F  M K G  P+ R+   ++
Sbjct: 144 ELVGVYREF---AFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 198

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
             L+ N     +  +  +M  +GI  ++   + ++   C++ K++EA    K M  L + 
Sbjct: 199 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 258

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  LIN       ++ A  +L+ M   G++     +  +++G C+  K DE    
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE---- 314

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEE 422
                                      A+ +L  M +    + D  ++ + I   C   +
Sbjct: 315 ---------------------------AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I  A  LL  M+   +  +    ++ + G CK     +A  V  ++   +L  DS SY+ 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++G C+    +EA  +   M + G   +  ++N L+ GLC +   D A+++  L    G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +     Y+ ++ GL K++  +    +   +L  G       +  +I  + +  K+ +  
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F+ M   G  PD  T  +L+ G    S +         +  +       MYN LI+GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA 708
           +K     + + LL  M  +G  P+  T+G L+     E +  + F+
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 164/370 (44%), Gaps = 12/370 (3%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M +  I P+++  N L+  LF++ R+    D    M  +G  PN  T+  +I G      
Sbjct: 568 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D + S   EM + G+   +   + ++  L R  +++EA  L + M      PD   +E 
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HEC 684

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCG 370
            +        +    D L++     L P + V+   + GLC+ GK D++  F       G
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744

Query: 371 YVTSPHN----ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
           +V  P N     L+     AG    A  + ++M  R  + +  ++N  I  LC++E + +
Sbjct: 745 FV--PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 802

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L  ++    + P+  TY+  + G CK+ N + A ++  ++  + +    ++YS L+ 
Sbjct: 803 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC+   I  ++++   M K G       +  L+ G     ++ K  +L  + +    S 
Sbjct: 863 GLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLST 922

Query: 546 TTSTYTKIML 555
           T  ++ ++ L
Sbjct: 923 TAISHKQVDL 932


>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
          Length = 486

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 192/378 (50%), Gaps = 7/378 (1%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L+P  + +++ +  D   A++IF+  S Q  F+H+  TY  +I KLG A   + MEGL Q
Sbjct: 98  LTPARVHKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQ 157

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M K+  P      + ++  +      N A++    M   G++     FNV+L  ++E K
Sbjct: 158 QMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHK 217

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
                 + ++K++ + GI PN  T N L+     ++++  A   F +MHK+GC P+  T+
Sbjct: 218 -CLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETY 276

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I+++GL   S+V  ++ +L EM + G   +   Y  ++  LCR+  L EA RL   M+ 
Sbjct: 277 SILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKV 336

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           +   PD + Y  +I   C   R  DA  IL DM   G  P    +  +V GLC  GKFDE
Sbjct: 337 MGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDE 396

Query: 361 SVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCDS-WNIPIR 415
           + +F+E+       PH    + L+   CN GK   A  +L  M  + +A  +S W++ + 
Sbjct: 397 AKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLM 456

Query: 416 WLCENEEIRKAYELLGRM 433
            +CE+ +  +A EL+ ++
Sbjct: 457 RICEDSQT-EARELVDKL 473



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 114/236 (48%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E AL +F+++    +  ++ +Y+ L+   C  +K++ A  +F  M K GC     +++IL
Sbjct: 220 ETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSIL 279

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           + GLC   +V  A+ +     + G      TY  ++  L +    ++   +L++M V GC
Sbjct: 280 MQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGC 339

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y  +I     + +  D       M + G +P+  +  +L++GL +  +      
Sbjct: 340 NPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKD 399

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            + +++S+  +   S+Y++LI GL  EG   +A  +L +M  +   P  +T  +L+
Sbjct: 400 FVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLL 455



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 40/329 (12%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----- 363
           TY  LI  L    +      +++ M   G   T  +FVDI+    EVG  +E++      
Sbjct: 135 TYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQM 194

Query: 364 ------------------FLEDKC------------GYVTSP----HNALLECCCNAGKF 389
                              +E KC             +  SP    +N L+   C++ K 
Sbjct: 195 LEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKL 254

Query: 390 FLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  +  KM  +  I D ++++I ++ LC   +++ A  +L  M+    VPD  TY+  
Sbjct: 255 SHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTL 314

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   C+  N  +A R+  ++       D I+Y+ ++ G C+  +  +A ++   M +NGC
Sbjct: 315 LNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGC 374

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             ++ S+  L+ GLC   K D+A        S+G     S Y  ++ GL    +  +   
Sbjct: 375 LPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACE 434

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           VL  M  +  A     + +L+  + E ++
Sbjct: 435 VLVMMTKQTLAPHESTWSVLLMRICEDSQ 463



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 19/290 (6%)

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSA--QSLVLDSISYSK-----LVEGLCQVEKITEA 496
           +YS +    CKL       R F+ +    Q +  D   Y+      ++E   +V    EA
Sbjct: 132 SYSTYHTLICKL----GRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEA 187

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           ++ F  M + G    +  FN+L+  L   + ++ A+ L    +  G S  T TY  ++  
Sbjct: 188 IKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRA 247

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
                +      +  +M  +GC  DVE Y IL+Q +  ++++K      + M+  G VPD
Sbjct: 248 HCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPD 307

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +LL+ L     L      ++K+       D   YN +I G  +EG    A  +L 
Sbjct: 308 ALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILR 367

Query: 677 LMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGL 726
            M   G +P+A ++  LV     E        FD +   D V ++++ G 
Sbjct: 368 DMPENGCLPNALSYRTLVNGLCNEG------KFDEAK--DFVEEMISNGF 409



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 5/237 (2%)

Query: 461 ALRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN--I 517
           A+ +F   S Q     S S Y  L+  L +  +      +   M K+GC  +   F   I
Sbjct: 116 AMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDII 175

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            IYG   M   ++AI+        G       +  +++ L++ +  +  L +  ++   G
Sbjct: 176 EIYGEVGM--PNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFG 233

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
            + +   Y ILI++    +KL      FN M K G +PD ET   L+ GL   SQ+    
Sbjct: 234 ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTAL 293

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             ++++++   V D+  YN L+N L ++    +A  LL  M   G  PD   +  ++
Sbjct: 294 GVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVI 350


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 242/523 (46%), Gaps = 47/523 (8%)

Query: 181 RG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           RG  AD + V  EM + G  P     + +LE         SA+     +H +GC  +   
Sbjct: 172 RGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGN 231

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
             +V+  +     VD+++ +L ++   G + ++  Y  ++  LC   +      L + M 
Sbjct: 232 CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 291

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            +   P+ +T+  LI+ LC N   +  +++L  M+  G TP   ++  I+ G+C+ G  +
Sbjct: 292 RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLE 351

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWN 411
            +   L     Y   P    +N LL+  C+A ++   + +L +M D+   DC     ++N
Sbjct: 352 VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK---DCPLDDVTFN 408

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           I + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++A+ + + ++A 
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 468

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               ++ISY+ +++GLC  E+  +A ++   M + GC L+  +FN LI  LC    V++A
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           I L                                   L QMLV GC+ D+ +Y  +I  
Sbjct: 529 IEL-----------------------------------LKQMLVNGCSPDLISYSTVIDG 553

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           + +  K  +     NVMV  G+ P+     S+   L+   +++ V    + +   +   D
Sbjct: 554 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 613

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +YN +I+ L K G T +A   L  M+  G VP+ +T+ +L+
Sbjct: 614 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 656



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 195/452 (43%), Gaps = 43/452 (9%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++   CR  +LE A RL     A+ + P+  TY  ++  LC   R+ DA  +L++M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKF-----------------------------------D 359
             G  P   ++  I+   C  G F                                   D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E+++ L D   +   P    +NA+L+  C A ++   + ++E+M       +  ++N  I
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            +LC N    + +E+L +MV     PD   Y+  + G CK  + E A  +  ++ +  L 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + + Y+ L++GLC  E+  E  E+   M    C L   +FNIL+   C    VD+ I L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G      TYT ++ G  K     + +++L  M   GC  +  +Y I+++ +  
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             +  D     + M++ G   +  T  +L++ L     +      + +++ +    D   
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           Y+ +I+GL K G T +A  LL++M+ KG  P+
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 578


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 202/429 (47%), Gaps = 7/429 (1%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G  D V+  Y +M+ AG VPN  T  YLL  L +  R E A   FR M  +GC PN  
Sbjct: 29  KSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF 88

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++ I+I GL    +VD++  +L EM D G Q  +  Y  ++  LC+  KL+EA+ LF  M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD + Y  LI+   +   + +A  + E+M+  G  PT   +  ++ G    G+F
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 359 DESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIP 413
               +  +D       P+    N LL+  C  G    A +  LE  +     D  S+N  
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           IR +C   +  +A  LL  M+ S V PD  +Y+  + G  K    + A+++F ++    L
Sbjct: 269 IRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D+ SYS +++ LC+  K+  A  VF  M  NG +  ++    L+ GLC   ++ ++  
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCE 388

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L               Y  +M  L K +R+ D+  +  ++   G + DVE   ++++++ 
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 594 EQNKLKDCA 602
             +  KD A
Sbjct: 449 RSDD-KDAA 456



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 175/417 (41%), Gaps = 40/417 (9%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           + NYLLEVL ++ R +     +  M   GC PN+ T+  +++ L                
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSL---------------- 62

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
                              C+  + EEA  +F+ M A    P+  +Y  LI  LC   ++
Sbjct: 63  -------------------CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKV 103

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
           D+A ++L +MI  G  P    +  ++ GLC++GK  E+V+           P    +N L
Sbjct: 104 DEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVL 163

Query: 380 LECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++     G    A  + E+M ++  I    ++N  +       E  +   L   M+    
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           VP+  T++  + G CK+ +  +A R+F ++ +     D +SY+ L+ G+C   K  EA  
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQR 283

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M ++G      S+NILI G      +D AI+L      SG      +Y+ I+  L 
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           +  +     VV   M+  G A D      L+  +    +L +    F  MVK   VP
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 191/452 (42%), Gaps = 35/452 (7%)

Query: 80  LKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLV 138
           +  F+W   Q  + H   +Y  ++  L  +G  + + G   +M+     PN       L+
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTY-TYGYLL 59

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
            S     R   A  V   M + G   +V  +++++  +   ++   +   +  EM+  G 
Sbjct: 60  RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK-VDEAAELLNEMIDGGH 118

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PNV T   LL  L +  +++ A+D F RM  +GC P+   + ++I G      + ++  
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +  EM + G    +  Y  ++    R+ +      LFK M     +P+  T+  L++  C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA 378
           +   + +A+ +  +M  +G  P    +  ++RG+C  GK                 PH  
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK-----------------PHE- 280

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                        A+ +L +M    +  D  S+NI I    ++  +  A +L   +  S 
Sbjct: 281 -------------AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + PD  +YS  +   C+      A  VF+ + A     D+     LV GLC+ E++TE+ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           E+F  M K  C      +N+L+Y LC  ++ D
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 8/283 (2%)

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           VL K   C++      +  + A   V ++ +Y  L+  LCQ ++  EA  VF  M+  GC
Sbjct: 26  VLAKSGRCDH--VYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGC 83

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           S +  S++ILI GLC  +KVD+A  L +     G      TY  ++ GL K+ + K+ + 
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           + ++M+  GC  D   Y +LI   S++  + +    F  M++ G +P   T  SLL G +
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              +   V S    ++    V +   +N L++G  K G   +A  L   M   G  PD  
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 689 THGLLVGS--SVGEEIDSRRFAFD---SSSFPDSVS-DILAEG 725
           ++  L+    S G+  +++R   +   S   PD VS +IL +G
Sbjct: 264 SYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 170/392 (43%), Gaps = 5/392 (1%)

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           L+Y  L+  L ++ R D       DM+  G  P    +  ++R LC+  +F+E+ +    
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEE 422
                 SP    ++ L+   C   K   A  +L +M D     +  ++   +  LC+  +
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +++A +L  RMV     PD   Y+  + G  K  +  +A R+F ++  +  +    +Y+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ G  +  +      +F  M + GC  +  +FN L+ G C M  + +A RL     S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 +Y  ++ G+    +  +   +L +M+  G   D+ +Y ILI   S+   L    
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  + K+GL PD  +  +++  L    ++         ++++    D+++   L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +    +++  L   M+    VP    + LL+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 67/151 (44%)

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           ++ T +Y  ++  L K  R   +      ML  GC  +   Y  L++S+ +  + ++   
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  M   G  P+  +   L+ GL  G ++   +  +N+++      +   Y  L++GL 
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           K G   +A  L   M+ +G  PD   + +L+
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 246/548 (44%), Gaps = 25/548 (4%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++ A+ ++    + GF   V  +N VL A +  KR  +    V+KEM+++ + PNV T N
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+        I+ AL  F +M  KGC PN  T+  +I G     ++DD   +L  M   
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  L  Y  +I  LCRE +++E   +   M       DE+TY  LI   C+      A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             +  +M+  GLTP+   +  ++  +C+ G  + ++ FL+        P    +  L++ 
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389

Query: 383 CCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
               G    A  +L +M D   +    ++N  I   C   ++  A  +L  M    + PD
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +YS  + G C+  + ++ALRV R++  + +  D+I+YS L++G C+  +  EA +++ 
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G      ++  LI   C+   ++KA++L +     G      TY+ ++ GL K  
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R ++   +L ++  E        Y  LI++ S            N+  K        +++
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCS------------NIEFK--------SVV 609

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           SL+ G      +         ++  +   D + YNI+I+G  + G   +A  L   M+  
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669

Query: 682 GWVPDATT 689
           G++    T
Sbjct: 670 GFLLHTVT 677



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 209/485 (43%), Gaps = 46/485 (9%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR-VDDSVSILGEMFDLGIQLELSFYT 276
           I+ AL         G  P   ++  V+   I + R +  + ++  EM +  +   +  Y 
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C    ++ A+ LF  M     +P+ +TY  LI+  C+  ++DD   +L  M + 
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           GL P    +  ++ GLC  G+  E V+F                              +L
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKE-VSF------------------------------VL 298

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  R  + D  ++N  I+  C+     +A  +   M+   + P   TY++ +   CK 
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N   A+    Q+  + L  +  +Y+ LV+G  Q   + EA  V   M+ NG S S  ++
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI G CV  K++ AI +       G S    +Y+ ++ G  +     + L V  +M+ 
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG------LAD 629
           +G   D   Y  LIQ   EQ + K+    +  M++ GL PD  T  +L++       L  
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP-DAT 688
             QLH      N++V    + D   Y++LINGL K+  T +A  LL  +  +  VP D T
Sbjct: 539 ALQLH------NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592

Query: 689 THGLL 693
            H L+
Sbjct: 593 YHTLI 597



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 159/355 (44%), Gaps = 22/355 (6%)

Query: 98  TYCKMILKLGLAGNVEE-MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  +  AGN+   ME L Q  V+   PN R    +LV  F     +N A RVL  
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER-TYTTLVDGFSQKGYMNEAYRVLRE 405

Query: 157 MNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           MN  GF  SV  +N ++ G  V  K    D + V ++M + G+ P+V + + +L     +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGK--MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             ++ AL   R M +KG  P++ T+  +I+G     R  ++  +  EM  +G+  +   Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T +I   C E  LE+A++L   M    ++PD +TY  LIN L +  R  +A  +L  +  
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
               P+D  +  ++   C   +F   V               +L++  C  G    A  +
Sbjct: 584 EESVPSDVTYHTLIEN-CSNIEFKSVV---------------SLIKGFCMKGMMTEADQV 627

Query: 396 LEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            E M       D  ++NI I   C   +IRKAY L   MV S  +    T  A V
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 239/526 (45%), Gaps = 40/526 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L AIV+  + +   + + K+M  AG+ P++ TL+ L++      R++ A   F +M
Sbjct: 97  FTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKM 156

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I GL    +   +V    +    G Q  +  YT II  LC+  + 
Sbjct: 157 IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGET 216

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A  LFK M      P+ +TY  LI+ LC++  +++A DI   M    ++P    +  +
Sbjct: 217 TAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSL 276

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI 404
           ++GLC   ++ E+   L +       P+    N L++  C  GK   A+ + + M +  +
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  +       EI +A +L   M+     PD  +Y+  + G CK    ++A +
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  Q L  D+++Y+ L+ GLCQ+ ++ EA ++F  M  NG      ++++L+ G C
Sbjct: 397 LFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFC 456

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               + KA RL  +          STY K                            D+ 
Sbjct: 457 KEGYLGKAFRLFRV--------MQSTYLKP---------------------------DIA 481

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y ILI +M +   LKD    F+ +   GL+P+ +   ++++ L     L         +
Sbjct: 482 MYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNM 541

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             D    D   YN++I G  +    S+A+ L+  M  +G+V +A T
Sbjct: 542 EGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 216/494 (43%), Gaps = 6/494 (1%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL-GIQLELSFYT 276
           I+ AL  F  M  +   P    F  ++  ++   +   +V  L +  +L G+  ++   +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I       +++ A  +F  M  L L PD +T+  LIN LC+  +   A +  +D    
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLA 392
           G  PT   +  I+ GLC++G+   +        E  C      +N L++  C       A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             I   M  ++I+ D  ++N  I+ LC     ++A  LL  M   +++P+  T++  V  
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK     +A  VF+ ++   +  D ++YS L+ G     +I EA ++F  M   GC   
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           + S+NILI G C  +++D+A +L +     G +     Y  ++ GL +L R ++   +  
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M   G   D+  Y +L+    ++  L      F VM    L PD      L+  +    
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            L       ++L     + +  +Y  +IN L KEGL  +A      M G G  PD  ++ 
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554

Query: 692 LLVGSSVGEEIDSR 705
           +++   +  + +SR
Sbjct: 555 VIIRGFLQYKDESR 568



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 6/274 (2%)

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           Y   + + +Q+    L  D  + S L++    ++++  A  VF  M K G    + +FN 
Sbjct: 111 YGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNT 170

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI GLC + K  +A+       +SG   T  TYT I+ GL K+        +  +M   G
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG 230

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           C  +V  Y ILI S+ +   + +    F+ M    + PD  T  SL+ GL +  +    S
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGS 696
           + +N++ S + + +   +N+L++ + KEG  S+A  +   M   G  PD  T+  L+ G 
Sbjct: 291 ALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGY 350

Query: 697 SVGEEIDSRRFAFDS----SSFPDSVS-DILAEG 725
           S+  EI   R  FD+       PD+ S +IL +G
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKG 384


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 238/508 (46%), Gaps = 32/508 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            +  M+     P+    N LL  + +T    + L   R+M   G  P+  T  IVI  L 
Sbjct: 32  TFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLC 91

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             +RVD + S L ++  LG Q + + +T +I  LC E K+ EA+ LF  M      P+ +
Sbjct: 92  HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 151

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LIN LC++ ++ +A +I  +MI  G++P    +  ++ GLC++ ++          
Sbjct: 152 TYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK--------- 202

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             +VT+                    ++ +M D KI  D  + N  +  LC+   + +A+
Sbjct: 203 --HVTT--------------------LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 240

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +++  M+   V P+  TY+A + G C     + A++VF  +  +  V + ISY+ L+ G 
Sbjct: 241 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 300

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+++ + +A+ +F  MS+   + ++ ++N LI+GLC + ++  AI L     + G     
Sbjct: 301 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 360

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  +   L K +     + +L  +       D++ Y  ++  M    +L+D    F+ 
Sbjct: 361 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 420

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   GL P+  T   ++HGL     L   S   +++  +    +   YN++  G  +   
Sbjct: 421 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 480

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVG 695
             +   LL+ ML +G+  D +T  LLVG
Sbjct: 481 ALRTIELLEEMLARGFSVDVSTTTLLVG 508



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 138/614 (22%), Positives = 254/614 (41%), Gaps = 91/614 (14%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +I + K   +  + + ++M   GI P+V TL  ++  L   NR++ A     ++
Sbjct: 48  FNRLLTSIAKTKH-HSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKI 106

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I+GL    ++ +++ +  +M   G Q  +  Y  +I  LC++ ++
Sbjct: 107 LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQV 166

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV-- 346
            EA  +F  M    + P+ +TY  LI+ LC+         ++ +M+   + P  DVF   
Sbjct: 167 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP--DVFTLN 224

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            +V  LC+ G   E+ + ++        P    +NAL++  C   +  +A  + + M  +
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284

Query: 403 K-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
             +A+  S+N  I   C+ + + KA  L   M    + P+  TY+  + G C +   +DA
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344

Query: 462 LRVFRQVSAQSLVLDSISYSKL-----------------------------------VEG 486
           + +F ++ A+  + D ++Y  L                                   ++G
Sbjct: 345 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 404

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           +C+  ++ +A ++F  +S  G   +  ++NI+I+GLC    + +A +L S    +G S  
Sbjct: 405 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 464

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ----------- 595
             TY  I  G ++   A   + +L +ML  G ++DV    +L+  +S+            
Sbjct: 465 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILC 524

Query: 596 -----------------------------------NKLKDCALFFNVMVKAGLVPDRETM 620
                                              N L D    FN M+     P     
Sbjct: 525 KPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDF 584

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             LL  +A       V S   ++ S     D    NILIN          A  +L  +L 
Sbjct: 585 TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLK 644

Query: 681 KGWVPDATTHGLLV 694
            G+ PD  T+G L+
Sbjct: 645 LGFQPDVVTYGTLM 658



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 142/640 (22%), Positives = 271/640 (42%), Gaps = 44/640 (6%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISL 137
           A+ +F+ +S Q+   +T  TY  +I  L   G +++   L   MV + + P++     +L
Sbjct: 309 AMYLFEEMSRQELTPNTV-TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV-TYRTL 366

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
                 +  ++ AM +L  +    +   + ++  +L  +        D   ++  +   G
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE-LEDARDLFSNLSSKG 425

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + PNV T N ++  L +   +  A   F  M+K GC PN  T+ ++ +G + N+    ++
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 485

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF------------KMMRALDLMP 305
            +L EM   G  +++S  T ++ ML  ++ L+++++                MR+L  + 
Sbjct: 486 ELLEEMLARGFSVDVSTTTLLVGML-SDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLF 544

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
              ++  L +       LDDA      M+ +   P+   F  ++  + ++  +   ++  
Sbjct: 545 LSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLS 604

Query: 366 EDKCGYVTSPH----NALLECCCNAGKFFLAKCILEK----------------------M 399
                +   P     N L+   C+  +   A  +L K                      M
Sbjct: 605 TQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKM 664

Query: 400 ADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             + I+ D  ++N  I  LC   E +    LL  MV S ++P+   +S  V   CK    
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 724

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
             A  V   +  + +  D ++Y+ L++G C   ++ EAV+VF  M   GC  +  S+NIL
Sbjct: 725 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 784

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C ++++DKA+ L       G    T TY  ++ GL  + R +  + +  +M+  G 
Sbjct: 785 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 844

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D+  Y IL+  + + + L +  +    +  + L  D       + G+    +L     
Sbjct: 845 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 904

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
             + L S     D   YNI+I+GL K GL  +A+ L   M
Sbjct: 905 LFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 168/688 (24%), Positives = 289/688 (42%), Gaps = 51/688 (7%)

Query: 52  AKIQSLRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           AKI  L H   PD      LIR L     +  AL +F  + I + FQ    TY  +I  L
Sbjct: 104 AKILKLGH--QPDATTFTTLIRGLCVEGKIGEALHLFDKM-IGEGFQPNVVTYGTLINGL 160

Query: 107 GLAGNVEEMEGLCQNMV-KERYPNV--REALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
                V E   +   M+ K   PN+    +LI  +        V   M  +V+      K
Sbjct: 161 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-----K 215

Query: 164 LSVDVF--NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           +  DVF  N V+ A+ +E    A+   V   M+  G+ PNV T N L++     N ++ A
Sbjct: 216 IMPDVFTLNTVVDALCKEGM-VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 274

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +  F  M  K C  N  ++  +I G      VD ++ +  EM    +      Y  +I  
Sbjct: 275 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 334

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC   +L++AI LF  M A   +PD +TY  L + LC+N  LD A  +L+ +      P 
Sbjct: 335 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 394

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
             ++  I+ G+C  G+ +++ +   +       P    +N ++   C  G    A  +  
Sbjct: 395 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 454

Query: 398 KMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG----- 451
           +M     +  D ++N+  R    N E  +  ELL  M+      D +T +  ++G     
Sbjct: 455 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDD 513

Query: 452 ------KCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
                 K  LC    + R    Q+ +   +  S S++ L         + +A+  F  M 
Sbjct: 514 GLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRML 573

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
                 S+  F  L+  +  M+     + L +   S G      T   ++     L+R  
Sbjct: 574 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLG 633

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
               VLA++L  G   DV  Y  L+  + +             M+  G+ PD  T  SL+
Sbjct: 634 YAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLI 680

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           H L +  +   V++ +N++V+   + +  +++ +++ L KEG+ + A  ++D+M+ +G  
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 740

Query: 685 PDATTH-GLLVGSSVGEEIDSRRFAFDS 711
           PD  T+  L+ G  +  E+D     FD+
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDT 768



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 183/397 (46%), Gaps = 26/397 (6%)

Query: 142 VNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAGIVP 200
           + HY     + +   M+S G    V   N+++ +    +R G+A    V  +++K G  P
Sbjct: 594 MKHYST--VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYA--FSVLAKLLKLGFQP 649

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +V T   L+  L              +M  KG  P+  T+  +I  L          ++L
Sbjct: 650 DVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 696

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM +  I   +  ++ ++  LC+E  +  A  +  MM    + PD +TY  L++  C  
Sbjct: 697 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 756

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYV--TSPH 376
             +D+A  + + M+  G  P    +  ++ G C++ + D+++  LE     G +  T  +
Sbjct: 757 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 816

Query: 377 NALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+   C+ G+   A  +  +M A  +I D  ++ I + +LC+N  + +A  LL  +  
Sbjct: 817 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 876

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S++  D   Y+  + G C+    E A  +F  +S++ L  D  +Y+ ++ GLC+   + E
Sbjct: 877 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 936

Query: 496 AVEVFCCMSKNGC---SLSSSSFNILIYGLCVMRKVD 529
           A ++F  M +N     S SS +   LIY   ++ ++D
Sbjct: 937 ANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEID 973


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 244/535 (45%), Gaps = 12/535 (2%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKAGI 198
           +F    +V  A+++   M   G   +V  FN V+  +     G  D  F++KE MV+ G+
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL--GMCGRYDEAFMFKEKMVERGM 339

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P + T + L++ L    RI  A    + M KKG  PN   +  +I   I    ++ ++ 
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           I   M   G+ L  S Y  +I   C+  + + A RL K M ++    ++ ++  +I  LC
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYV-- 372
            +L  D A   + +M++  ++P   +   ++ GLC+ GK  +++     FL    G+V  
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVD 517

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
           T   NALL   C AGK   A  I +++  R  + D  S+N  I   C  +++ +A+  L 
Sbjct: 518 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 577

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            MV   + PD  TYS  + G   +   E+A++ +       ++ D  +YS +++G C+ E
Sbjct: 578 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +  E  E F  M       ++  +N LI   C   ++  A+ LR      G S  ++TYT
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G+  + R ++  ++  +M +EG   +V  Y  LI    +  ++         M   
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            + P++ T   ++ G A    +   S  +N++     V DS  Y   I G  K+G
Sbjct: 758 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 226/523 (43%), Gaps = 36/523 (6%)

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G  VEE       V ++ +M +AG+ PNV T N +++ L    R + A     +M ++G 
Sbjct: 286 GGKVEEA------VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P   T+ I++KGL    R+ D+  +L EM   G    +  Y  +I        L +AI 
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           +  +M +  L     TY  LI   C+N + D+A  +L++M+ IG       F  ++  LC
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
               FD ++ F+ +      SP   LL                                 
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTL------------------------------ 489

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC++ +  KA EL  + +    V D  T +A + G C+    ++A R+ +++  +  
Sbjct: 490 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 549

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           V+D +SY+ L+ G C  +K+ EA      M K G    + +++ILI GL  M KV++AI+
Sbjct: 550 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 609

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                  +G      TY+ ++ G  K +R ++      +M+ +    +   Y  LI++  
Sbjct: 610 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 669

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
              +L         M   G+ P+  T  SL+ G++  S++        ++  +    +  
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            Y  LI+G  K G   +   LL  M  K   P+  T+ +++G 
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 772



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 229/499 (45%), Gaps = 13/499 (2%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYTC 277
           ALD F  +  KG  P+  T  I++  L+  +          E FD+   G+  ++  +T 
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCC----EAFDVVCKGVSPDVYLFTT 278

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I   C+  K+EEA++LF  M    + P+ +T+  +I+ L    R D+A    E M+  G
Sbjct: 279 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 338

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           + PT   +  +V+GL    +  ++   L++       P    +N L++    AG    A 
Sbjct: 339 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 398

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I + M  + ++    ++N  I+  C+N +   A  LL  M+      +  ++++ +   
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C    ++ ALR   ++  +++       + L+ GLC+  K ++A+E++      G  + +
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            + N L++GLC   K+D+A R++      G      +Y  ++ G    ++  +  + L +
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+  G   D   Y ILI  +   NK+++   F++   + G++PD  T   ++ G     +
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-G 691
                   ++++S +   ++ +YN LI    + G  S A  L + M  KG  P++ T+  
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698

Query: 692 LLVGSSVGEEIDSRRFAFD 710
           L+ G S+   ++  +  F+
Sbjct: 699 LIKGMSIISRVEEAKLLFE 717



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 201/445 (45%), Gaps = 17/445 (3%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           ++LI        L+ A++I K + + K    T+ TY  +I      G  +  E L + M+
Sbjct: 382 NNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMR-----VLVNMNSGGFKLSVDVFNVVLGAIVE 178
              +   + +  S++    +H   + A+R     +L NM+ GG  L+     ++ G    
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT----LISGLCKH 496

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            K   A  + ++ + +  G V +  T N LL  L E  +++ A    + +  +GC  +  
Sbjct: 497 GKHSKA--LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 554

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++  +I G     ++D++   L EM   G++ +   Y+ +I  L   NK+EEAI+ +   
Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +   ++PD  TY  +I+  C+  R ++  +  ++M+   + P   V+  ++R  C  G+ 
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 674

Query: 359 DESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
             ++   ED      SP++A    L++      +   AK + E+M    +  +   +   
Sbjct: 675 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I    +  ++ K   LL  M   +V P+  TY+  + G  +  N  +A R+  ++  + +
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794

Query: 474 VLDSISYSKLVEGLCQVEKITEAVE 498
           V DSI+Y + + G  +   + EA +
Sbjct: 795 VPDSITYKEFIYGYLKQGGVLEAFK 819


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 242/538 (44%), Gaps = 47/538 (8%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  F  +L +I + K  ++  + +  +M   GI PN+ TLN L+       R+  A   
Sbjct: 67  SIADFTKLLISITKMKH-YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             ++ K G  PN  TF  +I+GL    ++ + + +  +M   G Q  +  Y  +I  LC+
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
                 AIRL + M   +  PD + Y  +I+ LC++ ++  A ++  +MI  G++P+   
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMA 400
           +  ++  LC + ++      L +       P+    + +++  C  GK   A  +++ M 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            R +  +  ++N  +   C   E+ +A ++   MV     PD  +YS  + G CK+   E
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A+ +F ++  + L+ ++++YS L+ GLC V ++ +A+ +F  M   G      S+ IL+
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVE 576
             LC  R++D+AI L      S        YT ++ G+ +   L+ A+DL   L+    +
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS---K 482

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   +V  Y I+I  + +Q  L + +  F  M + G  P+  T                 
Sbjct: 483 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT----------------- 525

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                             YN++  G  +   T +   LL  ML +G+  D +T  +LV
Sbjct: 526 ------------------YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 225/514 (43%), Gaps = 16/514 (3%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F RM      P+   F  ++  +         +S+  +M   GI   +   
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C   +L  A  +   +  L   P+  T+  LI  LC   ++ +   + + MI 
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG    ++  L    +  C      + ++++  C   +   
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 392 AKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  +M  + I+    ++N  I  LC   E +    LL  MV S ++P+   +S  V 
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  V   +  + +  + ++Y+ L++G C   ++ EAV+VF  M   G + 
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 346

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S++ LI G C +++++KA+ L            T TY+ +M GL  + R +D + + 
Sbjct: 347 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 406

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D  +YCIL+  + +  +L +       +  + + PD +    ++ G+   
Sbjct: 407 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S     +   Y I+INGL ++GL ++AS L   M  KG+ P+  T+
Sbjct: 467 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526

Query: 691 GLLV-----------GSSVGEEIDSRRFAFDSSS 713
            L+            G  + +E+ +R F+ D S+
Sbjct: 527 NLITRGFLRNNETLRGIQLLQEMLARGFSADVST 560


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 246/538 (45%), Gaps = 8/538 (1%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKAGI 198
           +F    +V  A+ +   M   G   +V  +N V+  +    R   D  F++KE MV+ G+
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGR--YDEAFMFKEKMVERGV 318

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P + T + L++ L +  RI  A    + M +KG  PN   +  +I  LI    ++ ++ 
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIE 378

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           I   M   G+ L  S Y  +I   C+  + + A RL K M ++    ++ ++  +I  LC
Sbjct: 379 IKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLC 438

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTS 374
            +   D A   + +M++  ++P   +   ++ GLC+ GK  ++V     FL       T 
Sbjct: 439 SHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTK 498

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRM 433
             NALL   C AGK      I +++  R  + D  S+N  I   C N+++ +A+  +  M
Sbjct: 499 TSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEM 558

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           V   + PD  TYS  + G   +   E+A++ +       ++ D  +YS +++G C+ E+ 
Sbjct: 559 VKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERT 618

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            E  ++F  M  N    ++  +N LI   C   ++  A+ LR      G S  ++TYT +
Sbjct: 619 EEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSL 678

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G+  + R ++  ++L +M +EG   +V  Y  LI    +  ++         M    +
Sbjct: 679 IKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 738

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            P++ T   ++ G A    +   S  ++++     V DS  Y   I G  K+G   QA
Sbjct: 739 HPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA 796



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 125/534 (23%), Positives = 240/534 (44%), Gaps = 40/534 (7%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ P+V      +    +  ++E A++ F +M + G  PN  T+  VI GL  + R D++
Sbjct: 247 GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEA 306

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
                +M + G++  L  Y+ ++  L +  ++ +A  + K M      P+ + Y  LI+ 
Sbjct: 307 FMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDS 366

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS 374
           L E   L+ A +I + M+  GL+ T   +  +++G C+ G+ D +   L++    G+  +
Sbjct: 367 LIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVN 426

Query: 375 PHNALLECC--CNAGKFFLAKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLG 431
             +     C  C+   F  A   + +M  R ++         I  LC++ +  KA EL  
Sbjct: 427 QGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWL 486

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           + +    + D  T +A + G C+    E+  R+ +++  +  V+D +SY+ L+ G C  +
Sbjct: 487 KFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNK 546

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+ EA      M K G    + +++ILI GL  M KV++AI+       +G      TY+
Sbjct: 547 KLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYS 606

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLV-----------------------------------E 576
            ++ G  K +R ++   +  +M+                                    +
Sbjct: 607 VMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHK 666

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G + +   Y  LI+ MS  +++++  L    M   GL P+     +L+ G     Q+  V
Sbjct: 667 GISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 726

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
              + ++ S +   +   Y ++I G  ++G  ++AS LL  M  KG VPD+ T+
Sbjct: 727 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITY 780



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/482 (22%), Positives = 223/482 (46%), Gaps = 12/482 (2%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYTC 277
           ALD F  +  KG  P+  T  I++  L+  +          E F +   G+  ++  +T 
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCC----EAFHVVCKGVSPDVYLFTT 257

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I   C+  K+EEAI LF  M    ++P+ +TY  +I+ L  + R D+A    E M+  G
Sbjct: 258 AINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERG 317

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           + PT   +  +V+GL +  +  ++   L++       P    +N L++    AG    A 
Sbjct: 318 VEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAI 377

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I + M  + ++    ++N  I+  C++ +   A  LL  M+      +  ++++ +   
Sbjct: 378 EIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLL 437

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C    ++ ALR   ++  +++       + L+ GLC+  K ++AVE++      G  + +
Sbjct: 438 CSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDT 497

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            + N L++GLC   K+++  R++      G      +Y  ++ G    ++  +  + + +
Sbjct: 498 KTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDE 557

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+ +G   D   Y ILI+ +   NK+++   F+    + G++PD  T   ++ G     +
Sbjct: 558 MVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAER 617

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                   ++++S++   ++ +YN LI    + G  S A  L + M  KG  P++ T+  
Sbjct: 618 TEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTS 677

Query: 693 LV 694
           L+
Sbjct: 678 LI 679


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 242/538 (44%), Gaps = 47/538 (8%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  F  +L +I + K  ++  + +  +M   GI PN+ TLN L+       R+  A   
Sbjct: 58  SIADFTKLLISITKMKH-YSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             ++ K G  PN  TF  +I+GL    ++ + + +  +M   G Q  +  Y  +I  LC+
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
                 AIRL + M   +  PD + Y  +I+ LC++ ++  A ++  +MI  G++P+   
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMA 400
           +  ++  LC + ++      L +       P+    + +++  C  GK   A  +++ M 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            R +  +  ++N  +   C   E+ +A ++   MV     PD  +YS  + G CK+   E
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A+ +F ++  + L+ ++++YS L+ GLC V ++ +A+ +F  M   G      S+ IL+
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVE 576
             LC  R++D+AI L      S        YT ++ G+ +   L+ A+DL   L+    +
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS---K 473

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   +V  Y I+I  + +Q  L + +  F  M + G  P+  T                 
Sbjct: 474 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT----------------- 516

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                             YN++  G  +   T +   LL  ML +G+  D +T  +LV
Sbjct: 517 ------------------YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 225/514 (43%), Gaps = 16/514 (3%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F RM      P+   F  ++  +         +S+  +M   GI   +   
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C   +L  A  +   +  L   P+  T+  LI  LC   ++ +   + + MI 
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG    ++  L    +  C      + ++++  C   +   
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 392 AKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  +M  + I+    ++N  I  LC   E +    LL  MV S ++P+   +S  V 
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  V   +  + +  + ++Y+ L++G C   ++ EAV+VF  M   G + 
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 337

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S++ LI G C +++++KA+ L            T TY+ +M GL  + R +D + + 
Sbjct: 338 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 397

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D  +YCIL+  + +  +L +       +  + + PD +    ++ G+   
Sbjct: 398 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S     +   Y I+INGL ++GL ++AS L   M  KG+ P+  T+
Sbjct: 458 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 517

Query: 691 GLLV-----------GSSVGEEIDSRRFAFDSSS 713
            L+            G  + +E+ +R F+ D S+
Sbjct: 518 NLITRGFLRNNETLRGIQLLQEMLARGFSADVST 551


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/535 (23%), Positives = 249/535 (46%), Gaps = 49/535 (9%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N+VL ++               EM + G+ P + T N ++  L ++N + + ++ F  +
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            ++G  P+  T+  +I  L     ++++  + G+M   G    +  Y+ +I  LC+  ++
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 289 EEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMI--VIGLTPTDDV 344
           +EA  L + M  ++ D++P+ +TY   ++ LC+     +A +++  +    + ++P    
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 345 FVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMA 400
           F  ++ GLC+ G+ DE+ +  +D    GYV +   +NAL+   C A K   A  ++E M 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 401 DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS-----VVPDCATYSAFVLGKCK 454
           D+ +  D  ++++ +   C+   + +A ELL  M         +VPD  T++  + G CK
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             N+E A  +F ++ A++L  D +++  L++GLC+  ++  A ++   M   G   +  +
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N L++GLC   ++++A +      SSG    + TY  ++  L +  R  D L +++++ 
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D   Y IL+  + +  K +        MV  G  P                   
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQP------------------- 464

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                           DS  +    +GL + G  +    LL ++L KG +PDATT
Sbjct: 465 ----------------DSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 236/503 (46%), Gaps = 26/503 (5%)

Query: 240 FEIVIKGLIANSRVDDSVSIL-GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           + IV++ L        ++ I  GEM   G+   +  Y  II  LC+ N L   + LF+ +
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD +TY  LI+ LC+   L++A  +  DM   G  P    +  ++ GLC+VG+ 
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 359 DESVNFLED----KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMAD---RKIADCDS 409
           DE+   +++     C  + +   +N+ L+  C       A  ++  + D   R   D  +
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           ++  I  LC+  +I +A  +   M+    VP+  TY+A V G CK    E A  +   + 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS-----SSSFNILIYGLCV 524
            + +  D I+YS LV+  C+  ++ EA+E+   M+  GC+ +       +FNILI G C 
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALD 581
               ++A  L     +        T+  ++ GL K   ++ A+D+L ++  +   G   +
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL---GVPPN 360

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           V  Y  L+  + +  ++++   F   MV +G VPD  T  SL++ L   S+       ++
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGS 696
           +L S     D+  YNIL++GLWK G T QA  +L+ M+GKG  PD+ T      GL    
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSG 480

Query: 697 SVGEEIDSRRFAFDSSSFPDSVS 719
           ++   ++  R        PD+ +
Sbjct: 481 NLAGTMELLRVVLAKGMLPDATT 503



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 220/469 (46%), Gaps = 14/469 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +++E+V+ G  P+V T N L++ L +   +E A      M  +GC PN  T+ ++I GL 
Sbjct: 59  LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLC 118

Query: 249 ANSRVDDSVSILGEMF--DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR--ALDLM 304
              R+D++  ++ EM      +   +  Y   +  LC+++   EA  L + +R  +L + 
Sbjct: 119 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 178

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +T+  LI+ LC+  ++D+A  + +DMI  G  P    +  +V GLC+  K + +   
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK------IADCDSWNIPI 414
           +E       +P    ++ L++  C A +   A  +L  MA R       + D  ++NI I
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C+     +A  L   MV  ++ PD  T+ A + G CK    E A  +   +    + 
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 358

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + ++Y+ LV GLC+  +I EA +    M  +GC   S ++  L+Y LC   + D A++L
Sbjct: 359 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 418

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            S   S G    T TY  ++ GL K  + +  + VL +M+ +G   D   +      +  
Sbjct: 419 VSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHR 478

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
              L        V++  G++PD  T  S+L  +    +L  V + I + 
Sbjct: 479 SGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEF 527



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 23/475 (4%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----GLAGNVEEMEGLCQN 121
           +++ L    D + AL+IF+    +     T  TY  +I  L     L   +E  E L + 
Sbjct: 7   VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVE- 65

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
             +  +P+V     +L+ S      +  A R+  +M+S G   +V  ++V++  + +  R
Sbjct: 66  --RGHHPDVV-TYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122

Query: 182 GFADFVFVYKEMVKAG--IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG--CCPNS 237
              +   + +EM +    ++PN+ T N  L+ L + +    A +  R +        P++
Sbjct: 123 -IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +I GL    ++D++ S+  +M   G    +  Y  ++  LC+ +K+E A  + + 
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT----DDVFVDI-VRGL 352
           M    + PD +TY  L++  C+  R+D+A ++L  M   G TP     D V  +I + G 
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 353 CEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
           C+ G F+++    E+       P      AL++  C AG+   A+ IL+ M +  +  + 
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N  +  LC++  I +A + L  MV S  VPD  TY + V   C+    +DAL++  +
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           + +     D+++Y+ LV+GL +  K  +A+ V   M   G    S +F     GL
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 169/725 (23%), Positives = 309/725 (42%), Gaps = 40/725 (5%)

Query: 37  SETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLD----------------------NTN 74
           +E    K H    Y + +  +  N   DHL R+L+                       + 
Sbjct: 115 AEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSR 174

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
            L  A  I + +  + +F+     Y  +I  L      + M  L   M +  Y       
Sbjct: 175 KLREAFDIIQTMR-KFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLF 233

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEM 193
            +L+  F    RV+ A+ +L  M S      + ++NV +      K G  D  +  + EM
Sbjct: 234 TTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCF--GKAGKVDMSWKFFHEM 291

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
              G++P+  T   ++ VL + NR++ A++ F ++ +    P +  +  +I G  +  + 
Sbjct: 292 KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKF 351

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           D++  +L      G    +  Y CI+  L ++ ++EEA+R+F+ M+  D +P+  TY  L
Sbjct: 352 DEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNIL 410

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+ LC   +L+ A +I +DM   GL P       ++  LC+  K +E+ +  E     V 
Sbjct: 411 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC 470

Query: 374 SPH----NALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIRKAYE 428
           +P+    ++L++     G+   A  + EKM D   +     +   IR   +       ++
Sbjct: 471 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHK 530

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   MV +   PD    + ++    K    E    +FR+++A   + D+ SYS L+ GL 
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +     E  E+F  M + GC L + ++N +I G C   KV+KA +L       G   T  
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  ++ GL K+ R  +  ++  +    G  L+V  Y  LI    +  ++ +  L    +
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           ++ GL P+  T   LL  L    +++        +       +   Y+ILINGL +    
Sbjct: 711 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 770

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDS----RRFAFDSSSFPDSVS-DI 721
           ++A      M   G  P+  T+  ++   +  G  +++     RF  +    PDS S + 
Sbjct: 771 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN-GGIPDSASYNA 829

Query: 722 LAEGL 726
           + EGL
Sbjct: 830 MIEGL 834



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 253/565 (44%), Gaps = 16/565 (2%)

Query: 59  HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           H L PD      +I VL   N L  A+++F+ +  Q R    A  Y  MI+  G AG  +
Sbjct: 294 HGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLE-QNRKVPCAYAYNTMIMGYGSAGKFD 352

Query: 114 EMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           E  GL +    K   P+V  A   ++       RV  A+R+   M       +V  +N++
Sbjct: 353 EAYGLLERQKAKGSIPSVI-AYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNIL 410

Query: 173 LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
           +  +  E +  A    +  +M +AG+ PNV T+N +++ L +  ++E A   F  M  K 
Sbjct: 411 IDMLCREGKLNAALE-IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C PN+ TF  +I GL    RVDD+ S+  +M D G       YT +I    +  + E+  
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           +++K M      PD       ++C+ +    +    +  ++   G  P    +  ++ GL
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589

Query: 353 CEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADC 407
            + G  +E+        E  C   T  +NA+++  C +GK   A  +LE+M  +      
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   I  L + + + +AY L      + +  +   YS+ + G  K+   ++A  +  +
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  + L  +  +++ L++ L + E+I EA+  F  M    C  +  +++ILI GLC +RK
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
            +KA          G    T TYT ++ GL K     +   + ++    G   D  +Y  
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829

Query: 588 LIQSMSEQNKLKDC-ALFFNVMVKA 611
           +I+ +S  NK  D  ALF    +K 
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKG 854



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 153/703 (21%), Positives = 280/703 (39%), Gaps = 80/703 (11%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           E  + +L     P+ +I VL    D ++A+  F+W   Q    H  + Y  +++ +    
Sbjct: 80  ENSLSALGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNT 139

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
             + +E + + M    +       I LV + V   ++  A  ++  M    F+ +   + 
Sbjct: 140 EFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYT 199

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           +++GA                                    L E    +  L  F +M +
Sbjct: 200 ILIGA------------------------------------LSEVREPDPMLILFHQMQE 223

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            G   N   F  +I+      RVD ++S+L EM    +  ++  Y   I    +  K++ 
Sbjct: 224 LGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDM 283

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           + + F  M++  LMPD++TY  +I  LC+  RLD+A ++ E +      P    +  ++ 
Sbjct: 284 SWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIM 343

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           G    GKFDE+   LE +    + P    +N +L C     +   A  I E+M    + +
Sbjct: 344 GYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPN 403

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++NI I  LC   ++  A E+   M  + + P+  T +  +   CK    E+A  +F 
Sbjct: 404 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV-----------------------FCC- 502
            +  +    +++++S L++GL +  ++ +A  +                       F C 
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523

Query: 503 -----------MSKNGCSLSSSSFNILIYGLCVMR--KVDKAIRLRSLAYSSGTSYTTST 549
                      M   GCS   +  N   Y  CV +  + +K   L     + G      +
Sbjct: 524 RKEDGHKIYKEMVHTGCSPDLTLINT--YMDCVFKAGETEKGRALFREINAHGFIPDARS 581

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y+ ++ GLVK   A +   +   M  +GC LD  AY  +I    +  K+         M 
Sbjct: 582 YSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMK 641

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G  P   T  S++ GLA   +L        +  S+   L+  +Y+ LI+G  K G   
Sbjct: 642 VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 701

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSV-GEEIDSRRFAFDS 711
           +A  +++ ++ KG  P+  T   L+ + V  EEI+     F S
Sbjct: 702 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQS 744



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/476 (22%), Positives = 209/476 (43%), Gaps = 41/476 (8%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G +P+V   N +L  L +  R+E AL  F  M K+   PN  T+ I+I  L    +++ +
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAA 423

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + I  +M   G+   +     +I  LC+  KLEEA  +F+ M      P+ +T+  LI+ 
Sbjct: 424 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           L +  R+DDA  + E M+  G  P   V+  ++R   + G+ ++     ++      SP 
Sbjct: 484 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543

Query: 377 ----NALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWL-------------- 417
               N  ++C   AG+    + +  ++ A   I D  S++I I  L              
Sbjct: 544 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 603

Query: 418 ---------------------CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
                                C++ ++ KAY+LL  M V    P   TY + + G  K+ 
Sbjct: 604 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 663

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ++A  +F +  +  + L+ + YS L++G  +V +I EA  +   + + G + +  ++N
Sbjct: 664 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            L+  L    ++++A+                TY+ ++ GL ++++     V   +M   
Sbjct: 724 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 783

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           G   +   Y  +I  +++   + + +  F+     G +PD  +  +++ GL+  ++
Sbjct: 784 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 839



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 5/339 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +YKEMV  G  P++  +N  ++ +F+    E     FR ++  G  P++R++ I+I GL+
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                +++  +   M + G  L+   Y  +I   C+  K+ +A +L + M+     P  +
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +I+ L +  RLD+A  + E+    G+     V+  ++ G  +VG+ DE+   +E+ 
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEI 423
                +P+    N LL+    A +   A    + M D K      +++I I  LC   + 
Sbjct: 711 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 770

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA+     M    + P+  TY+  + G  K  N  +A  +F +  A   + DS SY+ +
Sbjct: 771 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAM 830

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           +EGL    K  +A  +F      GC++ + +  +L+  L
Sbjct: 831 IEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 869



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 9/197 (4%)

Query: 99  YCKMILKLGLAGNVEE----MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           Y  +I   G  G ++E    ME L Q   K   PNV      L+ + V    +N A+   
Sbjct: 687 YSSLIDGFGKVGRIDEAYLIMEELMQ---KGLTPNVY-TWNCLLDALVKAEEINEALICF 742

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
            +M       +   +++++  +   ++    FVF ++EM K G+ PN  T   ++  L +
Sbjct: 743 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVF-WQEMQKLGLKPNTITYTTMISGLAK 801

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              I  A   F R    G  P+S ++  +I+GL + ++  D+ ++  E    G  +    
Sbjct: 802 AGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKT 861

Query: 275 YTCIIPMLCRENKLEEA 291
              ++  L +   LE+A
Sbjct: 862 CVVLLDALHKAECLEQA 878


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 149/603 (24%), Positives = 262/603 (43%), Gaps = 59/603 (9%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDL---SSALKIFKWVSIQKR 91
           L++ ++ IK+ +T      ++++  +    H I +++         S L  F ++S    
Sbjct: 46  LTTISEAIKNIETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPT 105

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           F HT  +YC M+                  ++  R     E+L+  V   V+      A 
Sbjct: 106 FSHTVQSYCSMV----------------HFLIAHRMNQQAESLLHFV---VSRKGKGSAS 146

Query: 152 RVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
            V  + + + G   S  VF+ ++ ++  E    +D +  ++   K  +    +    LLE
Sbjct: 147 SVFASILETKGTLSSSFVFDALM-SVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLE 205

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
            + + +    AL+ +  +   G  PN  TF +++  L    +V D+  I  E+   G+Q 
Sbjct: 206 RMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQP 265

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
               +  +I   C+   LEE  RL  +M    + PD  TY  LI+ LC+  +L+DAN + 
Sbjct: 266 TAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLF 325

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
           ++M   GL P D  F  ++ G C+ G+ D                               
Sbjct: 326 KEMCDRGLVPNDVTFTTLINGQCKNGRVD------------------------------- 354

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           LA  I ++M  + + AD   +N  I  LC+    R+A + +G M    ++PD  TY+  +
Sbjct: 355 LALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLL 414

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G CK  + E AL + +++  + + LD+++++ ++ GLC+  KI +A      M + G  
Sbjct: 415 DGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLK 474

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++ +++ G C    V    +L     S G      TY  +M GL K  + K+  ++
Sbjct: 475 PDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADML 534

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           L  ML  G   D   Y IL+Q   +  KL D   F NV  + GLV D  +  SLLH L+ 
Sbjct: 535 LNAMLNLGVVPDDITYNILLQGHCKHGKLGD---FQNVKTEMGLVSDYASYRSLLHELSK 591

Query: 630 GSQ 632
            S+
Sbjct: 592 ASK 594



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 1/319 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+   C  GK   A+ I +++    +     S+N  I   C++  + + + L   M  
Sbjct: 236 NVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEE 295

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             V PD  TYSA + G CK C  EDA  +F+++  + LV + ++++ L+ G C+  ++  
Sbjct: 296 FRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDL 355

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+E++  M   G       +N LI GLC      +A +        G      TYT ++ 
Sbjct: 356 ALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLD 415

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K    +  L +  +M+ EG  LD  A+  +I  +    K+ D       M++AGL P
Sbjct: 416 GSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKP 475

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T   ++ G      + +    + ++ SD  +     YN+L+NGL K+G    A  LL
Sbjct: 476 DDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLL 535

Query: 676 DLMLGKGWVPDATTHGLLV 694
           + ML  G VPD  T+ +L+
Sbjct: 536 NAMLNLGVVPDDITYNILL 554



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 35/286 (12%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ +  LC+  +++ A  +   +  + + P   +++  + G CK  N E+  R+   +
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVM 293

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               +  D  +YS L++GLC+  ++ +A  +F  M   G   +  +F  LI G C   +V
Sbjct: 294 EEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRV 353

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D A+                                    +  QM  +G   D+  Y  L
Sbjct: 354 DLALE-----------------------------------IYQQMFTKGLKADLVLYNTL 378

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  + +    ++   F   M K GL+PD+ T  +LL G      L L      ++V +  
Sbjct: 379 IDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGI 438

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            LD+  +  +I+GL ++G    A   L  ML  G  PD  T+ +++
Sbjct: 439 QLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVM 484



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 6/244 (2%)

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           DA++ FR     +L +       L+E + ++     A+E +  +  +G   +  +FN+L+
Sbjct: 180 DAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLM 239

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVE 576
             LC   KV  A  +      +G   T  ++  ++ G  K   L+    L +V+ +  V 
Sbjct: 240 NRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRV- 298

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
               DV  Y  LI  + ++ +L+D    F  M   GLVP+  T  +L++G     ++ L 
Sbjct: 299 --FPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLA 356

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                ++ +     D  +YN LI+GL K G   +A   +  M  +G +PD  T+  L+  
Sbjct: 357 LEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDG 416

Query: 697 SVGE 700
           S  E
Sbjct: 417 SCKE 420


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 244/535 (45%), Gaps = 12/535 (2%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKAGI 198
           +F    +V  A+++   M   G   +V  FN V+  +     G  D  F++KE MV+ G+
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL--GMCGRYDEAFMFKEKMVERGM 326

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P + T + L++ L    RI  A    + M KKG  PN   +  +I   I    ++ ++ 
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           I   M   G+ L  S Y  +I   C+  + + A RL K M ++    ++ ++  +I  LC
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYV-- 372
            +L  D A   + +M++  ++P   +   ++ GLC+ GK  +++     FL    G+V  
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVD 504

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
           T   NALL   C AGK   A  I +++  R  + D  S+N  I   C  +++ +A+  L 
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            MV   + PD  TYS  + G   +   E+A++ +       ++ D  +YS +++G C+ E
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +  E  E F  M       ++  +N LI   C   ++  A+ LR      G S  ++TYT
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G+  + R ++  ++  +M +EG   +V  Y  LI    +  ++         M   
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            + P++ T   ++ G A    +   S  +N++     V DS  Y   I G  K+G
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 226/523 (43%), Gaps = 36/523 (6%)

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G  VEE       V ++ +M +AG+ PNV T N +++ L    R + A     +M ++G 
Sbjct: 273 GGKVEEA------VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P   T+ I++KGL    R+ D+  +L EM   G    +  Y  +I        L +AI 
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           +  +M +  L     TY  LI   C+N + D+A  +L++M+ IG       F  ++  LC
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
               FD ++ F+ +      SP   LL                                 
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTL------------------------------ 476

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC++ +  KA EL  + +    V D  T +A + G C+    ++A R+ +++  +  
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           V+D +SY+ L+ G C  +K+ EA      M K G    + +++ILI GL  M KV++AI+
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                  +G      TY+ ++ G  K +R ++      +M+ +    +   Y  LI++  
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
              +L         M   G+ P+  T  SL+ G++  S++        ++  +    +  
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            Y  LI+G  K G   +   LL  M  K   P+  T+ +++G 
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 229/499 (45%), Gaps = 13/499 (2%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYTC 277
           ALD F  +  KG  P+  T  I++  L+  +          E FD+   G+  ++  +T 
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCC----EAFDVVCKGVSPDVYLFTT 265

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I   C+  K+EEA++LF  M    + P+ +T+  +I+ L    R D+A    E M+  G
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           + PT   +  +V+GL    +  ++   L++       P    +N L++    AG    A 
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I + M  + ++    ++N  I+  C+N +   A  LL  M+      +  ++++ +   
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C    ++ ALR   ++  +++       + L+ GLC+  K ++A+E++      G  + +
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            + N L++GLC   K+D+A R++      G      +Y  ++ G    ++  +  + L +
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+  G   D   Y ILI  +   NK+++   F++   + G++PD  T   ++ G     +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-G 691
                   ++++S +   ++ +YN LI    + G  S A  L + M  KG  P++ T+  
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685

Query: 692 LLVGSSVGEEIDSRRFAFD 710
           L+ G S+   ++  +  F+
Sbjct: 686 LIKGMSIISRVEEAKLLFE 704



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 201/445 (45%), Gaps = 17/445 (3%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           ++LI        L+ A++I K + + K    T+ TY  +I      G  +  E L + M+
Sbjct: 369 NNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMR-----VLVNMNSGGFKLSVDVFNVVLGAIVE 178
              +   + +  S++    +H   + A+R     +L NM+ GG  L+     ++ G    
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT----LISGLCKH 483

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            K   A  + ++ + +  G V +  T N LL  L E  +++ A    + +  +GC  +  
Sbjct: 484 GKHSKA--LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++  +I G     ++D++   L EM   G++ +   Y+ +I  L   NK+EEAI+ +   
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +   ++PD  TY  +I+  C+  R ++  +  ++M+   + P   V+  ++R  C  G+ 
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661

Query: 359 DESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
             ++   ED      SP++A    L++      +   AK + E+M    +  +   +   
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I    +  ++ K   LL  M   +V P+  TY+  + G  +  N  +A R+  ++  + +
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781

Query: 474 VLDSISYSKLVEGLCQVEKITEAVE 498
           V DSI+Y + + G  +   + EA +
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFK 806


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 242/523 (46%), Gaps = 47/523 (8%)

Query: 181 RG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           RG  AD + V  EM + G  P     + +LE         SA+     +H +GC  +   
Sbjct: 135 RGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGN 194

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
             +V+  +     VD+++ +L ++   G + ++  Y  ++  LC   +      L + M 
Sbjct: 195 CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            +   P+ +T+  LI+ LC N   +  +++L  M+  G TP   ++  I+ G+C+ G  +
Sbjct: 255 RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLE 314

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWN 411
            +   L     Y   P    +N LL+  C+A ++   + +L +M D+   DC     ++N
Sbjct: 315 VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK---DCPLDDVTFN 371

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           I + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++A+ + + ++A 
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               ++ISY+ +++GLC  E+  +A ++   M + GC L+  +FN LI  LC    V++A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           I L                                   L QMLV GC+ D+ +Y  +I  
Sbjct: 492 IEL-----------------------------------LKQMLVNGCSPDLISYSTVIDG 516

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           + +  K  +     NVMV  G+ P+     S+   L+   +++ V    + +   +   D
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +YN +I+ L K G T +A   L  M+  G VP+ +T+ +L+
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 196/456 (42%), Gaps = 43/456 (9%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++   CR  +LE A RL     A+ + P+  TY  ++  LC   R+ DA  +L++M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKF-----------------------------------D 359
             G  P   ++  I+   C  G F                                   D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E+++ L D   +   P    +NA+L+  C A ++   + ++E+M       +  ++N  I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            +LC N    + +E+L +MV     PD   Y+  + G CK  + E A  +  ++ +  L 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + + Y+ L++GLC  E+  E  E+   M    C L   +FNIL+   C    VD+ I L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G      TYT ++ G  K     + +++L  M   GC  +  +Y I+++ +  
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             +  D     + M++ G   +  T  +L++ L     +      + +++ +    D   
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           Y+ +I+GL K G T +A  LL++M+ KG  P+   +
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 244/535 (45%), Gaps = 12/535 (2%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKAGI 198
           +F    +V  A+++   M   G   +V  FN V+  +     G  D  F++KE MV+ G+
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL--GMCGRYDEAFMFKEKMVERGM 315

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P + T + L++ L    RI  A    + M KKG  PN   +  +I   I    ++ ++ 
Sbjct: 316 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 375

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           I   M   G+ L  S Y  +I   C+  + + A RL K M ++    ++ ++  +I  LC
Sbjct: 376 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 435

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYV-- 372
            +L  D A   + +M++  ++P   +   ++ GLC+ GK  +++     FL    G+V  
Sbjct: 436 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVD 493

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
           T   NALL   C AGK   A  I +++  R  + D  S+N  I   C  +++ +A+  L 
Sbjct: 494 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 553

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            MV   + PD  TYS  + G   +   E+A++ +       ++ D  +YS +++G C+ E
Sbjct: 554 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 613

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +  E  E F  M       ++  +N LI   C   ++  A+ LR      G S  ++TYT
Sbjct: 614 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 673

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G+  + R ++  ++  +M +EG   +V  Y  LI    +  ++         M   
Sbjct: 674 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 733

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            + P++ T   ++ G A    +   S  +N++     V DS  Y   I G  K+G
Sbjct: 734 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 788



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 226/523 (43%), Gaps = 36/523 (6%)

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G  VEE       V ++ +M +AG+ PNV T N +++ L    R + A     +M ++G 
Sbjct: 262 GGKVEEA------VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 315

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P   T+ I++KGL    R+ D+  +L EM   G    +  Y  +I        L +AI 
Sbjct: 316 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 375

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           +  +M +  L     TY  LI   C+N + D+A  +L++M+ IG       F  ++  LC
Sbjct: 376 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 435

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
               FD ++ F+ +      SP   LL                                 
Sbjct: 436 SHLMFDSALRFVGEMLLRNMSPGGGLL------------------------------TTL 465

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC++ +  KA EL  + +    V D  T +A + G C+    ++A R+ +++  +  
Sbjct: 466 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 525

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           V+D +SY+ L+ G C  +K+ EA      M K G    + +++ILI GL  M KV++AI+
Sbjct: 526 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 585

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                  +G      TY+ ++ G  K +R ++      +M+ +    +   Y  LI++  
Sbjct: 586 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 645

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
              +L         M   G+ P+  T  SL+ G++  S++        ++  +    +  
Sbjct: 646 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 705

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            Y  LI+G  K G   +   LL  M  K   P+  T+ +++G 
Sbjct: 706 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 748



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 229/499 (45%), Gaps = 13/499 (2%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYTC 277
           ALD F  +  KG  P+  T  I++  L+  +          E FD+   G+  ++  +T 
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCC----EAFDVVCKGVSPDVYLFTT 254

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I   C+  K+EEA++LF  M    + P+ +T+  +I+ L    R D+A    E M+  G
Sbjct: 255 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 314

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           + PT   +  +V+GL    +  ++   L++       P    +N L++    AG    A 
Sbjct: 315 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 374

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I + M  + ++    ++N  I+  C+N +   A  LL  M+      +  ++++ +   
Sbjct: 375 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 434

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C    ++ ALR   ++  +++       + L+ GLC+  K ++A+E++      G  + +
Sbjct: 435 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 494

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            + N L++GLC   K+D+A R++      G      +Y  ++ G    ++  +  + L +
Sbjct: 495 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 554

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+  G   D   Y ILI  +   NK+++   F++   + G++PD  T   ++ G     +
Sbjct: 555 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 614

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-G 691
                   ++++S +   ++ +YN LI    + G  S A  L + M  KG  P++ T+  
Sbjct: 615 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 674

Query: 692 LLVGSSVGEEIDSRRFAFD 710
           L+ G S+   ++  +  F+
Sbjct: 675 LIKGMSIISRVEEAKLLFE 693



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 201/445 (45%), Gaps = 17/445 (3%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           ++LI        L+ A++I K + + K    T+ TY  +I      G  +  E L + M+
Sbjct: 358 NNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 416

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMR-----VLVNMNSGGFKLSVDVFNVVLGAIVE 178
              +   + +  S++    +H   + A+R     +L NM+ GG  L+     ++ G    
Sbjct: 417 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT----LISGLCKH 472

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            K   A  + ++ + +  G V +  T N LL  L E  +++ A    + +  +GC  +  
Sbjct: 473 GKHSKA--LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 530

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++  +I G     ++D++   L EM   G++ +   Y+ +I  L   NK+EEAI+ +   
Sbjct: 531 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 590

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +   ++PD  TY  +I+  C+  R ++  +  ++M+   + P   V+  ++R  C  G+ 
Sbjct: 591 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 650

Query: 359 DESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
             ++   ED      SP++A    L++      +   AK + E+M    +  +   +   
Sbjct: 651 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 710

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I    +  ++ K   LL  M   +V P+  TY+  + G  +  N  +A R+  ++  + +
Sbjct: 711 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 770

Query: 474 VLDSISYSKLVEGLCQVEKITEAVE 498
           V DSI+Y + + G  +   + EA +
Sbjct: 771 VPDSITYKEFIYGYLKQGGVLEAFK 795


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 240/523 (45%), Gaps = 47/523 (8%)

Query: 181 RG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           RG  AD + V  EM + G  P     + +LE         SA+     +H +GC  +   
Sbjct: 135 RGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGN 194

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
             +V+  +     VD ++ +L ++   G + ++  Y  ++  LC   +      L + M 
Sbjct: 195 CNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            +   P+ +T+  LI+ LC N   +  +++L  M   G TP   ++  I+ G+C+ G   
Sbjct: 255 RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLK 314

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWN 411
            +   L     Y   P    +N LL+  C+A ++   + +L +M D+   DC     ++N
Sbjct: 315 VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK---DCPLDDVTFN 371

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           I + + C+N  + +  ELL +M+V   +PD  TY+  + G CK    ++A+ + + ++A 
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               ++ISY+ +++GLC  E+  +A ++   M + GC L+  +FN LI  LC    V++A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           I L                                   L QMLV GC+ D+ +Y  +I  
Sbjct: 492 IEL-----------------------------------LKQMLVNGCSPDLISYSTVIDG 516

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           + +  K  +     NVMV  G+ P+     S+   L+   +++ V    + +   +   D
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +YN +I+ L K G T +A   L  M+  G VP+ +T+ +L+
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 194/456 (42%), Gaps = 43/456 (9%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++   CR  +LE A RL     A+ + P+  TY  ++  LC   R+ DA  +L++M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-----------KCGYVTSP-------- 375
             G  P   ++  I+   C  G F  +V  LED            C  V +         
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 376 --------------------HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
                               +NA+L+  C A ++   + ++E+M       +  ++N  I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            +LC N    + +E+L +M      PD   Y+  + G CK  + + A  +  ++ +  L 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + + Y+ L++GLC  E+  E  E+   M    C L   +FNIL+   C    VD+ I L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G      TYT ++ G  K     + +++L  M   GC  +  +Y I+++ +  
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             +  D     + M++ G   +  T  +L++ L     +      + +++ +    D   
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           Y+ +I+GL K G T +A  LL++M+ KG  P+   +
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 153/653 (23%), Positives = 290/653 (44%), Gaps = 29/653 (4%)

Query: 61  LSPDHLIRVLDN-TNDLSSALKIFKWVSIQ-KRFQHTADTYCKMILKLGLAGNVEEMEGL 118
           L+P  ++ VL    NDL+   +    +      F+HT+ +   MI  L  +G + + +  
Sbjct: 76  LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 135

Query: 119 CQNMVKERYPNVREALISL-----------------VFSFVNHYRVNGAMRVLVNMNSGG 161
              M++    +  E + SL                 + ++V   ++  A      + S G
Sbjct: 136 LLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 195

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           F +S+D  N ++G++V  + G+ +  + VY+E+ ++G+  NV TLN ++  L +  ++E 
Sbjct: 196 FTVSIDACNALIGSLV--RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
                 ++ +KG  P+  T+  +I    +   ++++  ++  M   G    +  Y  +I 
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+  K E A  +F  M    L PD  TY  L+   C+   + +   +  DM    + P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCIL 396
               F  ++      G  D+++ +          P N     L++  C  G   +A  + 
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  +  A D  ++N  +  LC+ + + +A +L   M   ++ PD  T +  + G CKL
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N ++A+ +F+++  + + LD ++Y+ L++G  +V  I  A E++  M       +  S+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +IL+  LC    + +A R+     S     T      ++ G  +   A D    L +M+ 
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613

Query: 576 EGCALDVEAYCILIQS-MSEQNKLKDCALFFNVMV-KAGLVPDRETMLSLLHGLADGSQL 633
           EG   D  +Y  LI   + E+N  K   L   +   + GLVPD  T  S+LHG    +Q+
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                 + K++      D S Y  +ING   +   ++A  + D ML +G+ PD
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/510 (19%), Positives = 213/510 (41%), Gaps = 32/510 (6%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N    + L+    +  ++  A + F  +  KG   +      +I  L+    V+ +  + 
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            E+   G+ + +     ++  LC++ K+E+       ++   + PD +TY  LI+     
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
             +++A +++  M   G +P    +  ++ GLC+                          
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK-------------------------- 317

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                 GK+  AK +  +M    ++ D  ++   +   C+  ++ +  ++   M    VV
Sbjct: 318 -----HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV 372

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD   +S+ +    +  N + AL  F  V    L+ D++ Y+ L++G C+   I+ A+ +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M + GC++   ++N +++GLC  + + +A +L +          + T T ++ G  K
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           L   ++ + +  +M  +   LDV  Y  L+    +   +      +  MV   ++P   +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L++ L     L       ++++S +      + N +I G  + G  S     L+ M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612

Query: 680 GKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
            +G+VPD  ++  L+   V EE  S+ F  
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGL 642



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 6/236 (2%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREA 133
           +L +A+++F+ +  +KR +    TY  ++   G  G+++  + +  +MV KE  P     
Sbjct: 495 NLQNAMELFQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
            I LV +  +   +  A RV   M S   K +V + N ++              F+ K M
Sbjct: 554 SI-LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK-M 611

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK--GCCPNSRTFEIVIKGLIANS 251
           +  G VP+  + N L+        +  A    ++M ++  G  P+  T+  ++ G    +
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           ++ ++  +L +M + G+  + S YTC+I     ++ L EA R+   M      PD+
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 108/248 (43%), Gaps = 10/248 (4%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D +CK+       GN++    L Q M ++R         +L+  F     ++ A  +  +
Sbjct: 488 DGHCKL-------GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S     +   +++++ A+   K   A+   V+ EM+   I P V   N +++    + 
Sbjct: 541 MVSKEILPTPISYSILVNALCS-KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL--GIQLELSF 274
                     +M  +G  P+  ++  +I G +    +  +  ++ +M +   G+  ++  
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  I+   CR+N+++EA  + + M    + PD  TY  +IN       L +A  I ++M+
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719

Query: 335 VIGLTPTD 342
             G +P D
Sbjct: 720 QRGFSPDD 727



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 75  DLSSALKIFKWVS-IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           D+ +A +I  W   + K    T  +Y  ++  L   G++ E   +   M+ +   N++  
Sbjct: 530 DIDTAKEI--WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK---NIKPT 584

Query: 134 LI---SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           ++   S++  +      +     L  M S GF      +N ++   V E+     F  V 
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644

Query: 191 K-EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           K E  + G+VP+V T N +L      N+++ A    R+M ++G  P+  T+  +I G ++
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704

Query: 250 NSRVDDSVSILGEMFDLGIQLELSF 274
              + ++  I  EM   G   +  F
Sbjct: 705 QDNLTEAFRIHDEMLQRGFSPDDKF 729


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 260/570 (45%), Gaps = 20/570 (3%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+K  V  +N +L  +V+    F     VYK+++ +G  PN+ T   L+    +  +   
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGK-VYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL+  R + +    P+   F ++I GL  +   D +V +   M    ++ E+  Y  +I 
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140

Query: 281 MLCRENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
            LC+   LE+A  L + M  +     PD +TY  LIN      R+ +A    E M   G+
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CGYVTS--PHNALLECCCNAGKFFLAKC 394
            P       +V G+C+ G  +E++  L+     G V     +N+++   C AGK   A  
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           IL+ M+     D  ++N  +   C+   + +A E+L  M   +++PD  TY+  V G C+
Sbjct: 261 ILKTMSCS--PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           +   + A  +  ++  Q  + D I+Y+ LV+GLC+  +I EA ++   MS  GC      
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           ++ L+ G C    V KA  + +   S        TY  ++ GL+K       + +++ ++
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   DV  Y  LI  + + N++++     + M   G  P+  T+ S++ GL    ++ 
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD 498

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD-------- 686
              S + ++       +  +Y  LI+GL K      A  +LD M G+G   D        
Sbjct: 499 DAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLI 558

Query: 687 -ATTHGLLVGSSVG--EEIDSRRFAFDSSS 713
            + +HG  V  ++   +E+ +R F  D S+
Sbjct: 559 VSMSHGGRVAEAMAMYDEMVARGFLPDGST 588



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 233/489 (47%), Gaps = 27/489 (5%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAG--IVPNV 202
           A+++  NM S   K  +  +N V+  +     +E+ R         +EM++ G    P++
Sbjct: 116 AVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAREL------LEEMIRKGGKSAPDI 169

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T N L+   +  +RI  A     +M   G  P+  T  I++ G+  +  V++++ IL  
Sbjct: 170 VTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDG 229

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G   ++  Y  II  LC   K+ EA  + K M      PD +T+  L++  C+   
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGM 286

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNA 378
           L  A ++LE+M    + P    +  +V GLC VG+   +   LE+  + GY+     + +
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDS----WNIPIRWLCENEEIRKAYELLGRMV 434
           L++  C +G+   A  ++++M+ R    C +    ++  +   C    + KA E+L  MV
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRG---CRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
             ++VP   TY+  + G  K  +   A+ +   + A+  V D ++Y+ L++GLC+  ++ 
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA ++   M+  GC  +  +   +++GLC + +VD A  L         +     YT ++
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL K  R  D  +VL  M  +G ALD  AY  LI SMS   ++ +    ++ MV  G +
Sbjct: 524 DGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFL 583

Query: 615 PDRETMLSL 623
           PD  T  +L
Sbjct: 584 PDGSTSKTL 592



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 137/623 (21%), Positives = 274/623 (43%), Gaps = 56/623 (8%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISL 137
           A++ F W   Q  ++H   +Y  ++  L  +G+      + ++++     PN    L++ 
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPN----LVTF 65

Query: 138 VFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDV--FNVVLGAIVEEKRGFAD-FVFVYKEM 193
                 + +   AMR L  + +   F ++ DV  FNV++  +   K G  D  V +++ M
Sbjct: 66  KILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLF--KDGNPDQAVKLFENM 123

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANS 251
             + + P + T N ++  L ++  +E A +    M +KG    P+  T+  +I      S
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R+ ++ +   +M   GI  ++     ++  +C++  +EEA+ +   M+    +PD +TY 
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+ LC   ++ +A +IL+ M     +P    F  ++ G C+ G    ++  LE+ C  
Sbjct: 244 SIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKA 426
              P    +  L+   C  G+  +A  +LE++  +  I D  ++   +  LC++ EI +A
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           ++L+  M V         YS+ V G C+  N   A  +  ++ + ++V    +Y+ ++ G
Sbjct: 361 HKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGG 420

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           L +   I++AV +   +   G      ++N LI GLC   +V +A  L     S G    
Sbjct: 421 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPN 480

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             T   ++ GL ++ R  D   ++ +M  +  A +V  Y  LI  + + +++ D  +  +
Sbjct: 481 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLD 540

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   G+                                    LD   Y  LI  +   G
Sbjct: 541 AMRGQGV-----------------------------------ALDDFAYRKLIVSMSHGG 565

Query: 667 LTSQASYLLDLMLGKGWVPDATT 689
             ++A  + D M+ +G++PD +T
Sbjct: 566 RVAEAMAMYDEMVARGFLPDGST 588



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 42/254 (16%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI---SLVFSFVNHYRVNGAMRVL 154
            Y  ++  L  +G +EE   L + M        R  ++   SLV  +     V+ A  +L
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVR---GCRTGVVMYSSLVSGYCRAGNVHKAREIL 399

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M S      +  +N+VLG ++++    +  V +  ++V  G VP+V T N L++ L +
Sbjct: 400 AEMVSINMVPPLFTYNIVLGGLIKDG-SISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 458

Query: 215 TNRIESALDQFRRMHKKGCCPNSRT----------------------------------- 239
            NR+  A D    M  +GC PN  T                                   
Sbjct: 459 ANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVV 518

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  +I GL  + R+DD+  +L  M   G+ L+   Y  +I  +    ++ EA+ ++  M 
Sbjct: 519 YTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMV 578

Query: 300 ALDLMPDELTYEEL 313
           A   +PD  T + L
Sbjct: 579 ARGFLPDGSTSKTL 592


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 225/506 (44%), Gaps = 42/506 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV++G  P+  T N L+     TN+++ A D F +M  +G   +  ++  +I+GL    R
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D++V + GEM     Q ++  Y  ++  LC   + EE + + + M+ L   P    Y  
Sbjct: 61  IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DK 368
           +++  C   +  +A ++L++M   GL P       ++   C+ G+  +++  LE      
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
           C      +NAL++  CN GK                                  + KA  
Sbjct: 177 CKPNVWTYNALVQGFCNEGK----------------------------------VHKAMT 202

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL +M    V PD  TY+  + G+C   + E A R+ R +    L+ D  +Y+ L+  LC
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 262

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  +  +A  +F  +   G   ++ +FN LI GLC   K D A +      S+G +  T 
Sbjct: 263 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 322

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY+  +  L K++ +++ L  + +ML +        Y I+I  + ++      A  +  M
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           V +G  PD  T  + +       +L+   + + ++  +   +D+  YN L++G    G T
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV 694
             A  +L  M     VP+  T+ +L+
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILL 468



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 145/649 (22%), Positives = 274/649 (42%), Gaps = 55/649 (8%)

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           TN +  A  +F  + + + F     +Y  +I  L  AG ++E   L   M +   P++  
Sbjct: 23  TNQVDVARDLFDKMPL-RGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---PDM-H 77

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
              +LV    N  R    + +L  M   G++ S   +  V+     E++   +   + +E
Sbjct: 78  MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA-KEAEEMLQE 136

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ P V T   ++    +  R+  AL     M  +GC PN  T+  +++G     +
Sbjct: 137 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 196

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V  ++++L +M   G+  +   Y  +I   C +  +E A RL ++M    L+ D+ TY  
Sbjct: 197 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 256

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN LC++ R D A  + + +   G+ P    F  ++ GLC+ GK D +  FLE      
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE------ 310

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                          K   A C           D  +++  I  LC+ +  ++    +G 
Sbjct: 311 ---------------KMVSAGC---------TPDTYTYSSFIEHLCKMKGSQEGLSFIGE 346

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+   V P    Y+  +    K  NY    R + ++ +     D ++Y+  +   C   +
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA  V   MSKNG ++ + ++N L+ G   + + D A+ +     S  +     TY  
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++  LV+++  +D+L +    + +                    +L D    F+VM K  
Sbjct: 467 LLRHLVRMRLVEDVLPLTPAGVWKAI------------------ELTDVFGLFDVMKKNE 508

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
            +P+  T  S+L G ++  +    +S ++ +  DS  L+  +Y  L+    K      A 
Sbjct: 509 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 568

Query: 673 YLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDSSSFPDSVSD 720
            L+  M+  G++P   ++  L+   + E + D  +  F +S + D   D
Sbjct: 569 VLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 617



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 4/264 (1%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           MV S   PD  T+++ ++G C+    + A  +F ++  +    D +SY+ L+EGLC+  +
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I EAVE+F  M +    +    +  L+ GLC   + ++ + +       G   +T  Y  
Sbjct: 61  IDEAVELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++    + ++AK+   +L +M  +G A  V     +I +  ++ ++ D      +M   G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             P+  T  +L+ G  +  ++H   + +NK+ +     D+  YN+LI G   +G    A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 673 YLLDLMLGKGWVPDATTHGLLVGS 696
            LL LM G G + D  T+  L+ +
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINA 260


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 240/518 (46%), Gaps = 30/518 (5%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           KEM   G++P+V   N +L  L +  +I+ A++ F  M   GC P   ++  VI GL + 
Sbjct: 9   KEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASI 68

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK-------LEEAIRLFKMMRALDL 303
            ++D++      M D G + ++  +T +I   C+  +       L +A++ F+       
Sbjct: 69  DKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR------- 121

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD   Y  +I+  C+   LD    ILE+M+  G  P    +  ++  LC++G+ DE+  
Sbjct: 122 -PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 364 FLE--DKCG----YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD-CDSWNIPIRW 416
             E   K G    YVT     L+E   N GK   A  +  +M +R      +  +  I  
Sbjct: 181 LFERMRKSGCLGDYVT--FMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+  ++ +A E+   +V   V      Y++ + G CKL   +D L++  Q+       D
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +Y+ LV G  +  ++ +A+E+F  +S  GC  +++++  +I GL   +++++A     
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
            A          +YT ++ GL   +R  +   +  ++   GC+ +V AY  +I  + +  
Sbjct: 359 EALD------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +++D    F  M  +  VP R T   ++ GL     L        ++V    V D+  Y 
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 472

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            LI+G  K     +A  LLD+ML KG  P A T+G +V
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 250/587 (42%), Gaps = 51/587 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           + +EM+ AG +P+      L++ L +  R++ A + F RM K GC  +  TF  +I+ L 
Sbjct: 146 ILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALS 205

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + ++D++  +  EM + G +  L     +I  LC+  K++EA  +++ + A  +    +
Sbjct: 206 NHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRV 265

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  L++  C+  R+DD   +L  M+     P    +  +V G     + D+++   +  
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325

Query: 369 CGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
             Y   P+ A    +++   +A +   AK   ++  D       S+   I+ L +++ I 
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD-----VISYTTVIKGLADSKRID 380

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A EL  ++  +   P+   Y+A + G  K    ED L+ F  +S  S V    +Y+ ++
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVI 440

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +GLC+ + + +A +VF  M + GC   + ++  LI G     K+D+A +L  +  + G  
Sbjct: 441 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500

Query: 545 YTTSTYTKIMLGLVKLQ-----------------------------------RAKDLLVV 569
            T  TY  I+ G  KL                                    RA++   V
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           L +M   GCA DV  Y  LI  +    ++ +    F+ M++ G  PD  T  +++   + 
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 620

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              +      +  +       D   YN L++G  K     QA  + D M+  G  P+A T
Sbjct: 621 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 680

Query: 690 -----HGLLVGSSVGEEIDSRRFAFDSSSFPDSVSD--ILAEGLGNT 729
                HGL             +   +    P ++    IL +GLG  
Sbjct: 681 FNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKA 727



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/658 (20%), Positives = 271/658 (41%), Gaps = 62/658 (9%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L N   L  A ++++ + I++ ++   +    +I  L  AG V+E   + Q +V +
Sbjct: 200 LIEALSNHGKLDEACELYREM-IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAK 258

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           +    R A  SL+  +    RV+  +++L+ M        +  +N+++       R   D
Sbjct: 259 KVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANR-LDD 317

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA------------------------ 221
            + ++K +   G  PN  T   +++ L++  R+E A                        
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSK 377

Query: 222 -LDQ----FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            +D+    F ++   GC PN   +  VI GL+   R++D +    +M         + YT
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC+   L +A ++F+ M     +PD +TY  LI+   +  ++D+A  +L+ M+  
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G  PT   +  IV G C++   +E+   +             + E  C  G F     + 
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQ-----------MRERGCEPGLFIFTSLL- 545

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
                              +        +AY++L  M      PD   Y++ +       
Sbjct: 546 ------------------SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTG 587

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              +A  VF  +  +    D+++Y  +++   ++  +  A E+   M+K+G      ++N
Sbjct: 588 RVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYN 647

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML-V 575
            L+ G   + +VD+A  +     +SG      T+  +M GL K  +      +  +ML  
Sbjct: 648 SLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 707

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +     + +Y ILI  + +  ++ +    F  M+  G++P+  T  SL++ LA   ++  
Sbjct: 708 DEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPE 767

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
               +  +V      D   Y+ LI GL    +   A  +   M+ +G  P+  T+ +L
Sbjct: 768 AKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 182/411 (44%), Gaps = 10/411 (2%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +EEA+   K M    LMPD +    ++N LC+  ++D A ++  +M  +G  PT   +  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 348 IVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GL  + K DE+  F    +++ C         L+   C AG+  +   +L +   R 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D   +   I   C+  ++   +++L  M+ +  +PD A Y   +   CKL   ++A  
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++     + D +++  L+E L    K+ EA E++  M + G        + LI+ LC
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              KVD+A  +     +   + +   Y  +M G  KL R  D L +L QM+      D++
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ 300

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y IL+   S  N+L D    F ++   G  P+  T  +++ GL D  ++    +  +  
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD-- 358

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               E LD   Y  +I GL       +A  L + +   G  P+   +  ++
Sbjct: 359 ----EALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVI 405



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 122/587 (20%), Positives = 233/587 (39%), Gaps = 85/587 (14%)

Query: 3   IKLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLS 62
           I ++  + +N++   + L   +SS  C             K +  T Y   IQ L     
Sbjct: 304 ILVAGFSRANRLDDALELFKLLSSYGC-------------KPNAAT-YTTIIQGLYDAQR 349

Query: 63  PDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM 122
            +      D   D+ S   + K ++  KR     D  C++  KL  AG        C   
Sbjct: 350 MEEAKAFFDEALDVISYTTVIKGLADSKRI----DEACELFEKLKTAG--------CS-- 395

Query: 123 VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
                PNV  A  +++   +   R+   ++   +M+      +   + VV+  + + +  
Sbjct: 396 -----PNVV-AYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQM- 448

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
             D   V+++MV+ G VP+  T   L++   + ++++ A      M  KG  P + T+  
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ G      ++++  ++ +M + G +  L  +T ++     + + EEA ++   M A  
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             PD + Y  LI+ L    R+ +A  + + MI  G  P    +  I++   ++G  + + 
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628

Query: 363 NFLE--------DKC--------GYVT-------------------SPH----NALLECC 383
             LE          C        GYV                     P+    N L+   
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 384 CNAGK----FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
              GK    F L K +LEK  D       S+ I I  L +   + +A+     M+   ++
Sbjct: 689 FKDGKTDRAFSLFKEMLEK--DEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGII 746

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+C TY++ +    K     +A ++   +    +  D  +YS L+ GL     +  A +V
Sbjct: 747 PECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDV 806

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA--YSSGTS 544
           F  M K GC+ +  ++ +L  G    R   +A+ L ++   +S G +
Sbjct: 807 FQEMMKRGCAPNEVTYKVLRRGF---RAAGRALDLEAVKQHFSQGVA 850



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 37/193 (19%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           A  +FK +  +     T  +Y  +I  LG AG V E     Q M+            SL+
Sbjct: 697 AFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
           +S     R+  A +++                                    ++MVK G+
Sbjct: 757 YSLAKAGRIPEAKKLV------------------------------------EDMVKLGV 780

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P+V   + L+  L +++ +++A D F+ M K+GC PN  T++++ +G  A  R  D + 
Sbjct: 781 NPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD-LE 839

Query: 259 ILGEMFDLGIQLE 271
            + + F  G+ +E
Sbjct: 840 AVKQHFSQGVAME 852


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 253/581 (43%), Gaps = 44/581 (7%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V  AM V   M   G      V+++++  +    R   + V +  + +  G VPNV   N
Sbjct: 160 VREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA-GEAVALLTDAMGKGFVPNVAVYN 218

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++    T  +E A+D F+ M  KGC PN RT+  +I G   + +V+ ++ +   M + 
Sbjct: 219 ALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA 278

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+   +  YT +I   C E  LE A RL   M A  L P+E T   LI+ LC++ R+++A
Sbjct: 279 GLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEA 338

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTSPH--NALLEC 382
              L  ++  G+     ++  ++  LC+ GKFD + N ++     G+V   H  ++L++ 
Sbjct: 339 QQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDG 398

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE--EIRKAYELL--GRMVVSSV 438
            C   K   A  +L  M +  +    +  +P   L +    E R     +   RM  + V
Sbjct: 399 LCRENKLLEAISLLNDMIESGV---QANAVPFTILIDKHLREFRSDSPKMISDRMAAAGV 455

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD  TY+ F+   C+    EDA  +  Q+    +  +  +Y+ L++G   +  +++A  
Sbjct: 456 KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFS 515

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRK------------------------VDKAIRL 534
               M  NGC  +  S+ +L+ GL + +                         +++ I+L
Sbjct: 516 SLKNMIDNGCKPNDESYTVLL-GLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKL 574

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           +     S  SY    + + +  + +L+ AK  LV    M         + Y  +I+    
Sbjct: 575 Q----CSSASYVYDCFIRCLSKVDRLEEAKSFLV---GMQSANLTPSEDVYTCMIECCYR 627

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
              LK+   F + MVK   +P  E+   ++  L +    H   S    ++S     D   
Sbjct: 628 MKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIA 687

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           + ILI+GL ++G T+  S LL  M  +   P +  +  L G
Sbjct: 688 WKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTG 728



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 116/502 (23%), Positives = 206/502 (41%), Gaps = 9/502 (1%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VP +  LN LL  L     +        RM  +    N  T+  +I        +  +  
Sbjct: 40  VPPIRCLNTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKR 95

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
            L  +   G+  +   YT  +   CR      A RLF +M          TY  L+  LC
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
               + +A  +   M   G  P   V+  +V GLC  G+  E+V  L D  G    P   
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRM 433
            +NAL++  C+ G   LA  I + M  +  + +  ++   I   C++ ++ +A  L  RM
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           + + + P+  TY+  + G+C   + E A R+   + A  L  +  +   L++ LC+  +I
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            EA +    + + G  ++   +  +I  LC   K D A  L     + G       Y+ +
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSL 395

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + GL +  +  + + +L  M+  G   +   + ILI     + +     +  + M  AG+
Sbjct: 396 IDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGV 455

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD  T    +       ++    S + +++      + + YN LI G    GL SQA  
Sbjct: 456 KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFS 515

Query: 674 LLDLMLGKGWVPDATTHGLLVG 695
            L  M+  G  P+  ++ +L+G
Sbjct: 516 SLKNMIDNGCKPNDESYTVLLG 537



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 130/585 (22%), Positives = 241/585 (41%), Gaps = 59/585 (10%)

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVR--EALISLVFSFVNHYRVNGAMRVLVNMNS 159
           +++ L   G + +ME L   M       VR      +L+ ++ +   +  A R L ++  
Sbjct: 49  LLMALARHGMLSDMESLAARM------PVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLR 102

Query: 160 GGFKLSVDVF-NVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            G       + + VLG     + G FA    ++  M + G      T   LL+ L     
Sbjct: 103 AGLAPDSHAYTSFVLGYC---RTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGM 159

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +  A+  F  M   GC P+S  + I++ GL    R  ++V++L +    G    ++ Y  
Sbjct: 160 VREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNA 219

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C    LE AI +FK M++   +P+  TY +LI   C++ +++ A  +   MI  G
Sbjct: 220 LIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAG 279

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           L P    +  +++G C  G  + +   L   + CG   +    L                
Sbjct: 280 LAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCL---------------- 323

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                           + I  LC++  I +A + LG +V   +  +   Y++ +   CK 
Sbjct: 324 ----------------VLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKS 367

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             ++ A  + +++  +  V D+  YS L++GLC+  K+ EA+ +   M ++G   ++  F
Sbjct: 368 GKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPF 427

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            ILI       + D    +     ++G      TYT  +    +  R +D   ++ QM+ 
Sbjct: 428 TILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMID 487

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   ++  Y  LI+  +    +         M+  G  P+ E+   LL  L   +  H 
Sbjct: 488 HGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYH- 546

Query: 636 VSSGINKLVSDS----EVLDSSMYNILINGLWKEGLTSQASYLLD 676
                  LV+DS    +++D  +   L+  + K   +S ASY+ D
Sbjct: 547 ------DLVADSISLWKIVDMKVLEELLEEVIKLQCSS-ASYVYD 584



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 165/393 (41%), Gaps = 5/393 (1%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
           TY  LIN  C    L  A   L  ++  GL P    +   V G C  G F  +       
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 366 -EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEI 423
            +  C      + ALL+  C AG    A  +   M  D    D   ++I +  LC     
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A  LL   +    VP+ A Y+A + G C   + E A+ +F+ + ++  + +  +Y++L
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + G C+  K+  A+ ++  M + G + +  ++  LI G C    ++ A RL     + G 
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           +    T   ++  L K  R ++    L  ++ +G  ++   Y  +I ++ +  K      
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
               ++  G VPD     SL+ GL   ++L    S +N ++      ++  + ILI+   
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHL 435

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +E  +     + D M   G  PD  T+ + + S
Sbjct: 436 REFRSDSPKMISDRMAAAGVKPDVVTYTVFIRS 468



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 167/399 (41%), Gaps = 80/399 (20%)

Query: 396 LEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +E +A R  + +  ++   I   C   ++  A   L  ++ + + PD   Y++FVLG C+
Sbjct: 62  MESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCR 121

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
              +  A R+F  +  +       +Y+ L++GLC    + EA+ VF  M  +GC+  S  
Sbjct: 122 TGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHV 181

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSG------------TSYTTS-------------- 548
           ++I+++GLC   +  +A+ L + A   G              Y ++              
Sbjct: 182 YSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQ 241

Query: 549 ---------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TYT+++ G  K  + +  +V+ ++M+  G A +V  Y  LIQ    +  L+
Sbjct: 242 SKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLE 301

Query: 600 DCALFFNVMVKAGLVPDRETMLSLL-----HGLADGSQL---HLVSSGI----------- 640
                 + M   GL P+  T L L+     HG  + +Q     LV  GI           
Sbjct: 302 HAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMI 361

Query: 641 ----------------NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
                            K++++  V D+ MY+ LI+GL +E    +A  LL+ M+  G  
Sbjct: 362 DALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQ 421

Query: 685 PDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILA 723
            +A    +L+   +      R F  DS   P  +SD +A
Sbjct: 422 ANAVPFTILIDKHL------REFRSDS---PKMISDRMA 451



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 105/504 (20%), Positives = 214/504 (42%), Gaps = 25/504 (4%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNV 130
           +T DL  A+ IFK +   K       TY ++I     +G VE    L   M++    PNV
Sbjct: 226 STGDLELAIDIFKGMQ-SKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNV 284

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
                +L+    +   +  A R+L +M + G   +     V++ A+ +  R      F+ 
Sbjct: 285 -VTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL- 342

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
             +V+ GI  N      +++ L ++ + + A +  +++  +G  P++  +  +I GL   
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           +++ +++S+L +M + G+Q     +T +I    RE + +    +   M A  + PD +TY
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG----KFDESVNFLE 366
              I   C++ R++DA  ++  MI  G+ P    +  +++G   +G     F    N ++
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID 522

Query: 367 DKCGYVTSPHNALLECCCNAGKF--FLAKCI-LEKMADRKIAD----------CDS---- 409
           + C      +  LL        +   +A  I L K+ D K+ +          C S    
Sbjct: 523 NGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYV 582

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           ++  IR L + + + +A   L  M  +++ P    Y+  +    ++   ++ALR    + 
Sbjct: 583 YDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMV 642

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            ++ +    SY  ++  LC+      A  +F  +     +    ++ ILI GL       
Sbjct: 643 KRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTA 702

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKI 553
              RL S          ++ Y+++
Sbjct: 703 DCSRLLSFMEEQNCRPGSAIYSRL 726


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 244/559 (43%), Gaps = 68/559 (12%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    ++  A+ VL  M   G++ ++   + +L      KR  ++ V +  +M   
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR-ISEAVALVDQMFVT 180

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  PN  T N L+  LF  N+   A+    RM  KGC P+  T+ +V+ GL      D +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +L +M    ++  +  YT II  LC+   +++A+ LFK M    + P+ +TY  LI+C
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   R  DA+ +L DMI   + P  DVF                               
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINP--DVFT-----------------------------F 329

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           +AL++     GK   A+ + ++M  R I     +++  I   C ++ + +A ++   MV 
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD  +YS  + G CK    ++ + +FR++S + LV ++++Y+ L++GL Q      
Sbjct: 390 KHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDM 449

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E+F  M  +G   +  ++N L+ GLC   K++KA+ +      S    T  TY  ++ 
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G+ K  + +D   +   + ++G   DV AY  +I     +   ++    F  M + G +P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
                                              +S  YN LI    ++G    ++ L+
Sbjct: 570 -----------------------------------NSGCYNTLIRARLRDGDREASAELI 594

Query: 676 DLMLGKGWVPDATTHGLLV 694
             M   G+  DA+T GL+ 
Sbjct: 595 KEMRSCGFAGDASTIGLVT 613



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 203/483 (42%), Gaps = 5/483 (1%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+  F  M K    P+   F  ++  +   ++ D  +S+  +M +LG+      Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR ++L  A+ +   M  L   P+ +T   L+N  C + R+ +A  +++ M V 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P    F  ++ GL    K  E+V  ++        P    +  ++   C  G   LA
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L KM   K+      +   I  LC+N+ +  A  L   M    + P+  TYS+ +  
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C    + DA R+   +  + +  D  ++S L++   +  K+ EA +++  M K     S
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             +++ LI G C+  ++D+A ++     S        +Y+ ++ G  K +R  + + +  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   G   +   Y  LIQ + +          F  MV  G+ P+  T  +LL GL    
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +L         L           YNI+I G+ K G       L   +  KG  PD   + 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 692 LLV 694
            ++
Sbjct: 541 TMI 543



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 144/325 (44%), Gaps = 5/325 (1%)

Query: 51  EAKIQSLRHNL-SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           E + + +R N+ +   LI  L N    S A ++   + I+++      T+  +I      
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKE 339

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G + E E L   MVK           SL+  F  H R++ A ++   M S      V  +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSY 399

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           + ++    + KR   + + +++EM + G+V N  T   L++ LF+    + A + F+ M 
Sbjct: 400 STLIKGFCKAKR-VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G  PN  T+  ++ GL  N +++ ++ +   +    ++  +  Y  +I  +C+  K+E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +   LF  +    + PD + Y  +I+  C     ++A+ + ++M   G  P    +  ++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578

Query: 350 RGLCEVGKFDESVNFLED--KCGYV 372
           R     G  + S   +++   CG+ 
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFA 603



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 2/177 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  +   M S G   ++  +N +L  + +  +     + V++ + ++ + P + T N ++
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMI 508

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           E + +  ++E   D F  +  KG  P+   +  +I G       +++ ++  EM + G  
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
                Y  +I    R+   E +  L K MR+     D  T   + N L +  RLD +
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG-RLDKS 624


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 145/595 (24%), Positives = 277/595 (46%), Gaps = 30/595 (5%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  +I      G++++  G    M+     PNV     S++ +      ++ AM VL +
Sbjct: 201 SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV-VTYSSIIAALCKAQAMDKAMEVLTS 259

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   +N ++       +      F+ K+M   G+ P+V T N L++ L +  
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL-KKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R   A   F  M K+G  P   T+  +++G      + +   +L  M   GI      ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I    ++ K+++A+ +F  MR   L PD +TY  +I  LC++ R++DA    E MI  
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
            L+P + V+  ++  LC   K+D++    +  L+      T   N++++  C  G+   +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + + + M    +  D  +++  I   C   ++ +A +LL  MV   + PDC TY+  + G
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK+   EDAL +FR++ +  +  D I+Y+ +++GL Q  +   A E++  ++++G  L 
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLV 568
            S++NI+++GLC     D+A+R+      +     T T+  ++  L+K+ R   AKDL  
Sbjct: 619 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 678

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            L+     G   DV  Y ++ +++ EQ  L++    F  M + G   +   + S+     
Sbjct: 679 ALS---ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI----- 730

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
                      + KL+   ++  +  Y  +I+        S AS  LDL+ G  +
Sbjct: 731 -----------VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 251/591 (42%), Gaps = 42/591 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +PNV + 
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N LL+ L + NR + AL+  + M   G  C P+  ++  VI G      +D +     EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLE---------------------------------- 289
            D GI   +  Y+ II  LC+   ++                                  
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 290 -EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EAI   K M +  + PD +TY  L++ LC+N R  +A  + + M   GL P    +  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRKI 404
           ++G    G   E    L+        P++   ++L C     GK   A  +  KM  + +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++   I  LC++  +  A     +M+   + P    Y++ +   C    ++ A  
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  + + LD+I ++ +++  C+  ++ E+ ++F  M + G      +++ LI G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
           +  K+D+A +L +   S G      TY  ++ G  K+ R +D LV+  +M   G + D+ 
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y I++Q + +  +       +  + ++G   +  T   +LHGL   +           L
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 L++  +NI+I  L K G   +A  L   +   G VPD  T+ L+ 
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 266/610 (43%), Gaps = 46/610 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFAD 185
           PNV    I L+    +  R   A+ +L  M   G     DV  +  V+    +E  G  D
Sbjct: 160 PNVFSYNI-LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE--GDLD 216

Query: 186 FVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
             +  Y EM+  GI+PNV T + ++  L +   ++ A++    M K G  PN RT+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G  ++ +  +++  L +M   G++ ++  Y  ++  LC+  +  EA ++F  M    L 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF------------VD----- 347
           P+  TY  L+        L + + +L+ M+  G+ P   VF            VD     
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 348 ------------------IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
                             ++  LC+ G+ ++++ + E       SP    +N+L+   C 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             K+  AK ++ +M DR I  D   +N  I   C+   + ++ +L   MV   V PD  T
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YS  + G C     ++A ++   + +  +  D ++Y+ L+ G C++ ++ +A+ +F  M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G S    ++NI++ GL   R+   A  L      SGT    STY  I+ GL K     
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + L +   + +    L+   + I+I ++ +  +  +    F  +   GLVPD  T   + 
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
             L +   L  +      +  +    +S M N ++  L + G  ++A   L ++  K + 
Sbjct: 697 ENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756

Query: 685 PDATTHGLLV 694
            +A+T  L +
Sbjct: 757 LEASTASLFL 766



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 232/517 (44%), Gaps = 39/517 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     PN  T+ 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G +++   +T ++  LC + +  +A+ +  + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIVRGLCEVGKF 358
           L  +P+  +Y  L+  LC+  R  +A ++L+ M   G     DV  +  ++ G  + G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           D++         Y T                        +M DR I  +  +++  I  L
Sbjct: 216 DKA---------YGT----------------------YHEMLDRGILPNVVTYSSIIAAL 244

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+ + + KA E+L  MV + V+P+C TY++ V G C     ++A+   +++ +  +  D 
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L++ LC+  + TEA ++F  M+K G     +++  L+ G      + +   L  L
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              +G       ++ ++    K  +    ++V ++M  +G   D   Y  +I  + +  +
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++D   +F  M+   L P      SL+H L    +       I +++     LD+  +N 
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+   KEG   ++  L DLM+  G  PD  T+  L+
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/448 (20%), Positives = 177/448 (39%), Gaps = 70/448 (15%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL--DLMPDELTY 310
            +D+  +  E+   G    +    C +  + R +      R  +M RA   ++ P+  TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI   C   RLD     L ++I  G       F  +++GLC   +  ++++       
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI------ 148

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
                                   +L +M     I +  S+NI ++ LC+    ++A EL
Sbjct: 149 ------------------------VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL 184

Query: 430 LGRMV--VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           L  M        PD  +Y+  + G  K  + + A   + ++  + ++ + ++YS ++  L
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+ + + +A+EV   M KNG   +  ++N +++G C   +  +AI      +S G     
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  +M  L K  R  +   +   M   G   ++  Y  L+Q  + +  L +     ++
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV+ G+ P+                 H V                  ++ILI    K+G 
Sbjct: 365 MVRNGIHPN-----------------HYV------------------FSILICAYAKQGK 389

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVG 695
             QA  +   M  +G  PD  T+G ++G
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIG 417


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 135/555 (24%), Positives = 246/555 (44%), Gaps = 42/555 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+  A+ +L  +   G    V  +  ++  + +EKR F  +   +KEM   G+  +    
Sbjct: 36  RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL-FKEMALRGLALDTVCY 94

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L+  L +T +I  A   ++ M   GC P+  T   +I GL    R+  +V I   M  
Sbjct: 95  TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 154

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G+      Y+ +I  LC+  K++ A+ +   M+     PD +TY  LI+ LC++  ++ 
Sbjct: 155 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEA 214

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK-----CGYVTSPHNALL 380
           A    ++M+  G  P    +  ++ G C+ G  D + + L  +     C      + A++
Sbjct: 215 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIV 274

Query: 381 ECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +      K   A  ++EK+ A+       ++N  +  LC+   + +A +LL ++V +   
Sbjct: 275 DWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 334

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY++ + G  K     +A ++F++++ + L LD++ Y+ L+  L Q  KI +A  V
Sbjct: 335 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 394

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           +  M+ +GC     + + +I GL    ++  A+R+     + G +     Y+ ++ GL K
Sbjct: 395 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 454

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            ++    L +LAQM    C  D   Y ILI  + +   ++    FF+ M++AG  PD  T
Sbjct: 455 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 514

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
                                              YNILI+G  K G T  A  + D M 
Sbjct: 515 -----------------------------------YNILISGFCKAGNTDAACGVFDDMS 539

Query: 680 GKGWVPDATTHGLLV 694
                 +  T+G L+
Sbjct: 540 SSRCSANVVTYGALI 554



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 222/483 (45%), Gaps = 7/483 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+   +   ++  A  V   M S G    V   + ++  + +  R     V ++K M  
Sbjct: 96  ALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR-IGAAVRIFKSMEA 154

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PN    + L+  L +  +++ AL+   +M K  C P++ T+ ++I GL  +  V+ 
Sbjct: 155 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEA 214

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDELTYEELI 314
           + +   EM + G + ++  Y  +I   C+    + A         ++    D  TY  ++
Sbjct: 215 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIV 274

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCG 370
           + L +N ++++A  ++E +   G TPT   +  ++ GLC++G+ +E+++ L    ++ C 
Sbjct: 275 DWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 334

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL 429
                + +L++      + F A  + ++MA R +A D   +   IR L +  +I +A  +
Sbjct: 335 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 394

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              M     VPD  T S  + G  K      A+R+F+ + A+ L  + + YS L+ GLC+
Sbjct: 395 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 454

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             K+  A+E+   M K  C+  + ++NILI GLC    V+ A         +G      T
Sbjct: 455 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 514

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ G  K         V   M    C+ +V  Y  LI  + ++ +L   +L+F  M 
Sbjct: 515 YNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMK 574

Query: 610 KAG 612
           + G
Sbjct: 575 ERG 577


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 145/595 (24%), Positives = 278/595 (46%), Gaps = 30/595 (5%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  +I      G++++  G    M+     PNV     S++ +      ++ AM VL +
Sbjct: 201 SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV-VTYSSIIAALCKAQAMDKAMEVLTS 259

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   +N ++       +      F+ K+M   G+ P+V T N L++ L +  
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL-KKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R   A   F  M K+G  P   T+  +++G      + +   +L  M   GI      ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I    ++ K+++A+ +F  MR   L PD +TY  +I  LC++ R++DA    E MI  
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
            L+P + V+  ++  LC   K+D++    +  L+      T   N++++  C  G+   +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + + + M    +  D  +++  I   C   ++ +A +LL  MV   + PDC TY+  + G
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK+   EDAL +FR++ +  +  D I+Y+ +++GL Q  +   A E++  ++++G  L 
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLV 568
            S++NI+++GLC     D+A+R+      +     T T+  ++  L+K+ R   AKDL  
Sbjct: 619 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 678

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            L+     G   DV  Y ++ +++ EQ  L++    F  M + G   +            
Sbjct: 679 ALS---ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS----------- 724

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
                 +++S + KL+   ++  +  Y  +I+        S AS  LDL+ G  +
Sbjct: 725 -----RMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 251/591 (42%), Gaps = 42/591 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +PNV + 
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N LL+ L + NR + AL+  + M   G  C P+  ++  VI G      +D +     EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLE---------------------------------- 289
            D GI   +  Y+ II  LC+   ++                                  
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 290 -EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EAI   K M +  + PD +TY  L++ LC+N R  +A  + + M   GL P    +  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRKI 404
           ++G    G   E    L+        P++   ++L C     GK   A  +  KM  + +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++   I  LC++  +  A     +M+   + P    Y++ +   C    ++ A  
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  + + LD+I ++ +++  C+  ++ E+ ++F  M + G      +++ LI G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
           +  K+D+A +L +   S G      TY  ++ G  K+ R +D LV+  +M   G + D+ 
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y I++Q + +  +       +  + ++G   +  T   +LHGL   +           L
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 L++  +NI+I  L K G   +A  L   +   G VPD  T+ L+ 
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 266/610 (43%), Gaps = 46/610 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFAD 185
           PNV    I L+    +  R   A+ +L  M   G     DV  +  V+    +E  G  D
Sbjct: 160 PNVFSYNI-LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE--GDLD 216

Query: 186 FVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
             +  Y EM+  GI+PNV T + ++  L +   ++ A++    M K G  PN RT+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G  ++ +  +++  L +M   G++ ++  Y  ++  LC+  +  EA ++F  M    L 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF------------VD----- 347
           P+  TY  L+        L + + +L+ M+  G+ P   VF            VD     
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 348 ------------------IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
                             ++  LC+ G+ ++++ + E       SP    +N+L+   C 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             K+  AK ++ +M DR I  D   +N  I   C+   + ++ +L   MV   V PD  T
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YS  + G C     ++A ++   + +  +  D ++Y+ L+ G C++ ++ +A+ +F  M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G S    ++NI++ GL   R+   A  L      SGT    STY  I+ GL K     
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + L +   + +    L+   + I+I ++ +  +  +    F  +   GLVPD  T   + 
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
             L +   L  +      +  +    +S M N ++  L + G  ++A   L ++  K + 
Sbjct: 697 ENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756

Query: 685 PDATTHGLLV 694
            +A+T  L +
Sbjct: 757 LEASTASLFL 766



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 115/517 (22%), Positives = 230/517 (44%), Gaps = 39/517 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     PN  T+ 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G +++   +T ++  LC + +  +A+ +  + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIVRGLCEVGKF 358
           L  +P+  +Y  L+  LC+  R  +A ++L+ M   G     DV  +  ++ G  + G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           D+                               A     +M DR I  +  +++  I  L
Sbjct: 216 DK-------------------------------AYGTYHEMLDRGILPNVVTYSSIIAAL 244

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+ + + KA E+L  MV + V+P+C TY++ V G C     ++A+   +++ +  +  D 
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L++ LC+  + TEA ++F  M+K G     +++  L+ G      + +   L  L
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              +G       ++ ++    K  +    ++V ++M  +G   D   Y  +I  + +  +
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++D   +F  M+   L P      SL+H L    +       I +++     LD+  +N 
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+   KEG   ++  L DLM+  G  PD  T+  L+
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 182/448 (40%), Gaps = 70/448 (15%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL--DLMPDELTY 310
            +D+  +  E+   G    +    C +  + R +      R  +M RA   ++ P+  TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI   C   RLD     L ++I  G       F  +++GLC   +  ++++       
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI------ 148

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
                                   +L +M     I +  S+NI ++ LC+    ++A EL
Sbjct: 149 ------------------------VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL 184

Query: 430 LGRMV--VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           L  M        PD  +Y+  + G  K  + + A   + ++  + ++ + ++YS ++  L
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+ + + +A+EV   M KNG   +  ++N +++G C                SSG     
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC----------------SSG----- 283

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
                         + K+ +  L +M  +G   DV  Y  L+  + +  +  +    F+ 
Sbjct: 284 --------------QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M K GL P+  T  +LL G A    L  +   ++ +V +    +  +++ILI    K+G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVG 695
             QA  +   M  +G  PD  T+G ++G
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIG 417


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 242/513 (47%), Gaps = 36/513 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D +  +  M+     P +     LL  + +     + L   ++M   G  P+  T  IVI
Sbjct: 39  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                 +RVD ++S+L ++  LG Q + + +T ++  LC   K+ EA+ +F  M      
Sbjct: 99  NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQ 158

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  L+N LC++ +L +A ++  +MI  G++P  D+F                   
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISP--DIFT------------------ 198

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                      +N+L+   CN  ++     +L +M   KI  +  S NI +  LC+  ++
Sbjct: 199 -----------YNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKV 247

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A++++  M+   V PD  TY+A + G C     ++A++VF  +     V + +SY+ L
Sbjct: 248 TEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTL 307

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + G C++++I +A+ +F  M +     ++ +++ LI+GLC + ++  AI L +   + G 
Sbjct: 308 INGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ 367

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL--DVEAYCILIQSMSEQNKLKDC 601
                TY+ ++  L K  R  + + +L    +EG  L  DV+ Y I I  M     L+  
Sbjct: 368 IPNLVTYSILLDYLCKNHRLAEAMALLKA--IEGSNLDPDVQVYNIAIDGMCRAGDLEAA 425

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ +   GL PD  T   ++ GL     L   S    ++  +  + +   YN +  G
Sbjct: 426 RDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQG 485

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L +   TS+A  LL+ ML +G+  D +T  LLV
Sbjct: 486 LLQNNKTSRAIQLLEEMLARGFSADVSTTALLV 518



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 211/466 (45%), Gaps = 41/466 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L +I + K  ++  + + K+M   GI P+V TL  ++      NR++ AL    ++
Sbjct: 59  FAKLLTSIAKMKH-YSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKI 117

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +++GL    ++ +++ +  +M   G Q  +  Y  ++  LC++ +L
Sbjct: 118 LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQL 177

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCE--------------------------NLR 322
            EA+ LF  M A  + PD  TY  LI+ LC                           N+ 
Sbjct: 178 TEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIV 237

Query: 323 LD---------DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKC 369
           +D         +A+D+++ MI  G+ P    +  ++ G C   + DE+V   +    + C
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYE 428
                 +N L+   C   +   A  + E+M  ++ I +  +++  I  LC    ++ A  
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L   MV    +P+  TYS  +   CK     +A+ + + +   +L  D   Y+  ++G+C
Sbjct: 358 LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMC 417

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   +  A ++F  ++  G      + NI+I GLC    +D+A +L      +G      
Sbjct: 418 RAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGC 477

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           TY  I  GL++  +    + +L +ML  G + DV    +L++ +S+
Sbjct: 478 TYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 163/354 (46%), Gaps = 15/354 (4%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREAL 134
           L+ AL +F  + I K       TY  +I  L      + +  L   MVK +  PNV  +L
Sbjct: 177 LTEALNLFSEM-IAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV-SL 234

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEM 193
             +V +     +V  A  V+  M  GG +  V  +  ++ G  +  +   A  V V+  M
Sbjct: 235 NIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEA--VKVFDMM 292

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           V+ G V NV + N L+    +  RI+ A+  F  M ++   PN+ T+  +I GL    R+
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D++++  EM   G    L  Y+ ++  LC+ ++L EA+ L K +   +L PD   Y   
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVD--IVRGLCEVGKFDESVNFL----ED 367
           I+ +C    L+ A D+  ++   GL P  DV+    ++RGLC+ G  DE+        E+
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQP--DVWTHNIMIRGLCKRGLLDEASKLFREMDEN 470

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
            C      +N + +      K   A  +LE+M  R   AD  +  + ++ L ++
Sbjct: 471 GCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDD 524



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 105/227 (46%), Gaps = 2/227 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  +    R++ AM +   M       +   ++ ++  +    R   D + ++ EMV 
Sbjct: 306 TLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR-LQDAIALFNEMVA 364

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G +PN+ T + LL+ L + +R+  A+   + +      P+ + + I I G+     ++ 
Sbjct: 365 CGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEA 424

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +   +   G+Q ++  +  +I  LC+   L+EA +LF+ M     + +  TY  +  
Sbjct: 425 ARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQ 484

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            L +N +   A  +LE+M+  G +        +V+ L + G  D+SV
Sbjct: 485 GLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG-LDQSV 530


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 247/531 (46%), Gaps = 33/531 (6%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           SV  F  +L +I   K  ++  + + K+M   GI  +V TL  ++      NR++     
Sbjct: 73  SVVDFAKILTSIANMKH-YSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             ++ K G  P++ TF  +I+GL    ++ +++ +  +M   G Q     Y  +I  LC+
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
                 AIRL + M   +  P+ +TY  +I+CL ++ ++++A +I  +MI  G++P    
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  I+ GLC   KF E               H A L               + +M D KI
Sbjct: 252 YNSIIHGLC---KFSEW-------------KHVATL---------------MNEMVDSKI 280

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +   +   +  LC+   +  A++++  M+   V PD  TY+A + G C     ++A +
Sbjct: 281 MPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADK 340

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           VF  +  +    + ISYS L+ G C++++I +A+ +F  M +     +  ++N LI+GLC
Sbjct: 341 VFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC 400

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
            + ++  AI L     +SG      TY  ++  L K +     + +L  +     A D++
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQ 460

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           +Y I+I  M    +L+     F+ +   GL PD  T   +++GL     L   +    ++
Sbjct: 461 SYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM 520

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +D    D   YN++  G  +   T  A  LL  MLG+G+  DA+T  L+V
Sbjct: 521 NTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 200/414 (48%), Gaps = 6/414 (1%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           ++  A+ +   M   GF+ +   +  ++  + +     A  + + + MV+    PNV T 
Sbjct: 159 KIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAA-IRLLRSMVQKNCEPNVITY 217

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N +++ LF+  ++  AL+ F  M  KG  PN  T+  +I GL   S      +++ EM D
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD 277

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             I   +  +T ++  LC+E  +  A  +  +M    + PD +TY  L++  C    +D+
Sbjct: 278 SKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDE 337

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A+ + + M+  G  P    +  ++ G C++ + D+++   E+ C     P    +N L+ 
Sbjct: 338 ADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIH 397

Query: 382 CCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C+ G+   A  +  +M A  +I D  ++ I + +LC+   + +A  +L  +  S++ P
Sbjct: 398 GLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAP 457

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  +Y+  + G C++   E A  +F  +S++ L  D  +Y+ ++ GLC    + EA ++F
Sbjct: 458 DIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLF 517

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
             M+ +GCS    ++N++  G     +   AI+L       G S   ST T I+
Sbjct: 518 REMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 213/483 (44%), Gaps = 5/483 (1%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N I+ AL  F RM      P+   F  ++  +         +S+  +M  LGI  ++   
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C  N+++    +   +  L   PD  T+  LI  LC   ++ +A  + + M+ 
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG    ++  L    +  C      +N +++C     +   
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  I  +M  + I+ +  ++N  I  LC+  E +    L+  MV S ++P+   ++  V 
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK      A  V   +  + +  D ++Y+ L++G C   ++ EA +VF  M + GC+ 
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  S++ LI G C ++++DKA+ L              TY  ++ GL  + R +D + + 
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D+  Y IL+  + +   L         +  + L PD ++   ++ G+   
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV 472

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S     D   Y I+INGL  +GL ++A+ L   M   G  PD  T+
Sbjct: 473 GELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTY 532

Query: 691 GLL 693
            L+
Sbjct: 533 NLI 535



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 138/290 (47%), Gaps = 1/290 (0%)

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I +A     RM+     P    ++  +     + +Y   L + +Q+ +  +  D  + + 
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++   C + ++     V   + K G    +++F  LI GLCV  K+ +A+ L       G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY  ++ GL K+  ++  + +L  M+ + C  +V  Y  +I  + +  ++ +  
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F+ M+  G+ P+  T  S++HGL   S+   V++ +N++V    + +  ++  L++ L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDS 711
            KEG+ + A  ++D+M+ +G  PD  T+  L+ G  +  E+D     FD+
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDT 344



 Score = 47.0 bits (110), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 57/285 (20%), Positives = 110/285 (38%), Gaps = 38/285 (13%)

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNH 144
           V IQ+  +    TY  ++    L   ++E + +   MV++   PNV  +  +L+  +   
Sbjct: 309 VMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVI-SYSTLINGYCKI 367

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
            R++ AM +   M       ++  +N ++  +    R   D + ++ EMV +G +P++ T
Sbjct: 368 QRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGR-LRDAIALFHEMVASGQIPDLVT 426

Query: 205 LNYLLEVLFETNRIESAL-----------------------------------DQFRRMH 229
              LL+ L +T  ++ A+                                   D F  + 
Sbjct: 427 YRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLS 486

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
            KG  P+  T+ I+I GL     + ++  +  EM   G   +   Y  I     R N+  
Sbjct: 487 SKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETL 546

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
            AI+L + M       D  T   ++  L ++        IL + +
Sbjct: 547 SAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 233/511 (45%), Gaps = 8/511 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIVIKGLIAN 250
            M +AG+ P+  T N L+  L     + +A   F +M ++ G C +  ++ I+IKGL A 
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAA 174

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R+DD+  +  +M     +  +  YT ++  LC+  ++ EA  L   M    ++P+ +TY
Sbjct: 175 GRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTY 234

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI  LC+  R DD   +LE M +   +P    +  +V GLC+ GK       L +  G
Sbjct: 235 NALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIG 294

Query: 371 YVTS----PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
              +     +NAL+   C  G    A  +L+ M   ++     ++N  I   C   ++ K
Sbjct: 295 KGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHK 354

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A   L +M  + + P+  T+++ + G+C +   + ALR+   +    ++ D  +Y+  ++
Sbjct: 355 AMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFID 414

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC   ++ EA  +F C+   G    +  +  L++G C +  +D A  L     S     
Sbjct: 415 ALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP 474

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  ++ GL K++R    + +L +M  +G       + ILI+ M    K  D A  +
Sbjct: 475 DVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMY 534

Query: 606 NVMVKAGLVPDRET-MLSLLHGLADG-SQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             M+ +G  PD++T  L +     +G ++   +   + ++       D   YN +I    
Sbjct: 535 EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYV 594

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             GL  +A +    ML     PD TT+ +L+
Sbjct: 595 DAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 225/484 (46%), Gaps = 37/484 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAGIVPNVDT 204
           R++ A RV   M+ G  +  V  + V+L  + + +R G A+ +    EMV  G+VPNV T
Sbjct: 176 RIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALL--GEMVNKGVVPNVVT 233

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N L+  L +  R +       +M  +   P+  T+  V+ GL  + +V     +L E  
Sbjct: 234 YNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAI 293

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G+ LE+  Y  +I   C+   ++ A+ + ++M+   + P   T+ E+I+  C   ++ 
Sbjct: 294 GKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVH 353

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCC 384
            A   L  M   GL+P    F  ++ G C VG+   ++  L+    Y   P         
Sbjct: 354 KAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLP--------- 404

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                           DR+     ++ I I  LC+  ++ +A+ L   + +  +      
Sbjct: 405 ----------------DRQ-----TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVI 443

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y++ V G C++ + + A  +  ++++++ + D  +Y+ L++GLC+V+++  A+++   M 
Sbjct: 444 YTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMK 503

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT-KIMLGLVK-LQR 562
           K G   ++ +FNILI  +   +K   A ++     SSG      TYT KI     +   +
Sbjct: 504 KQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATK 563

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV-MVKAGLVPDRETML 621
            +++ + + +M   G   DVE Y  +I++  +   LK+ A F +V M+   + PD  T  
Sbjct: 564 EENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAG-LKEKAFFAHVKMLSVPIDPDCTTYS 622

Query: 622 SLLH 625
            LL+
Sbjct: 623 ILLN 626



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 204/480 (42%), Gaps = 33/480 (6%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+   L  F  M K G  PN  T+  +I      + + D+ + L  M + G+  +   Y 
Sbjct: 70  RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYN 129

Query: 277 CIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           C++  LCR   L  A  LF +M R      D  +Y  LI  LC   R+DDA         
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACR------- 182

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
                   VF  + RG C  G                   +  LL+  C   +   A+ +
Sbjct: 183 --------VFAKMSRGWCRPG----------------VHTYTVLLDGLCKVRRVGEAEAL 218

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L +M ++ +  +  ++N  I  LC+        +LL +M +    PDC TY+  V G CK
Sbjct: 219 LGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCK 278

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                   +V  +   + + L+ ++Y+ L+ G C+   +  A++V   M +N  +    +
Sbjct: 279 HGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQT 338

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           FN +I+G C   KV KA+   +    +G S  T T+  ++ G   +   K  L +L  M 
Sbjct: 339 FNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLME 398

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D + Y I I ++ ++ +L++    F+ +   G+        SL+HG      + 
Sbjct: 399 EYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDID 458

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                + K+ S++ + D   YN LI+GL K     +A  LLD M  +G  P   T  +L+
Sbjct: 459 SAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 135/602 (22%), Positives = 246/602 (40%), Gaps = 93/602 (15%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D   V+ +M +    P V T   LL+ L +  R+  A      M  KG  PN  T+  +I
Sbjct: 179 DACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALI 238

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GL    R DD   +L +M       +   YT ++  LC+  K+    ++        + 
Sbjct: 239 GGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVA 298

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            + LTY  LIN  C+   +  A D+L+ M    + P    F +++ G C  GK  +++ F
Sbjct: 299 LEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAF 358

Query: 365 LEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L    G   SP+    N+L+   C+ G+  +A  +L+ M +  +  D  ++ I I  LC+
Sbjct: 359 LTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCD 418

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++ +A+ L   + +  +      Y++ V G C++ + + A  +  ++++++ + D  +
Sbjct: 419 EGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHT 478

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++GLC+V+++  A+++   M K G   ++ +FNILI  +   +K   A ++     
Sbjct: 479 YNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538

Query: 540 SSGTSYTTSTYT-KIMLGLVK-LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           SSG      TYT KI     +   + +++ + + +M   G   DVE Y  +I++  +   
Sbjct: 539 SSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAG- 597

Query: 598 LKDCALF--------------------------------------------------FNV 607
           LK+ A F                                                  F  
Sbjct: 598 LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQ 657

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN----------- 656
           M ++   P   T  +LL GL +  +L  V   + K+  +S +LD  M +           
Sbjct: 658 MCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEM 717

Query: 657 ------------------------ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                                   +L++GL   G    A  +   MLG G+  D     L
Sbjct: 718 YREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKL 777

Query: 693 LV 694
           L+
Sbjct: 778 LI 779



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 206/521 (39%), Gaps = 67/521 (12%)

Query: 140 SFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           + +N Y   G M+    VL  M        V  FN V+       +      F+  +M  
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFL-TQMAG 364

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           AG+ PN  T N L+         + AL     M + G  P+ +T+ I I  L    ++++
Sbjct: 365 AGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + S+   +   GI+     YT ++   C+   ++ A  L + M + + MPD  TY  LI+
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--------- 366
            LC+  RLD A D+L+ M   G+ PT   F  +++ +    K  ++    E         
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKP 544

Query: 367 DKCGYV--------------------------------TSPHNALLECCCNAG---KFFL 391
           DK  Y                                    +NA+++   +AG   K F 
Sbjct: 545 DKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFF 604

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLC--------ENEEI------RKAYELLGRMVVS 436
           A     KM    I  DC +++I + ++C        +NE+I      R   EL  +M  S
Sbjct: 605 AHV---KMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCES 661

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              P  +TY A + G C  C  E+   +  ++   S++LD      L+   C +E   EA
Sbjct: 662 DAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREA 721

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            E F  M+         S  +L+ GLC       A+ + S     G +Y    +  ++  
Sbjct: 722 CEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDC 781

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           L +   A   L +L+ M  + C      Y  L++ ++E N+
Sbjct: 782 LHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAELNE 822


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 256/536 (47%), Gaps = 8/536 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  F+ +L AI +  + F   + + ++M   GI  N  T + L+      +++  AL  
Sbjct: 80  SIIEFSKLLSAIAKMNK-FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  PN  T   ++ G   + R+ ++V+++ +MF  G Q     +  +I  L  
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA+ L   M A    PD +TY  ++N LC+    D A ++L  M    L P   +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           +  I+ GLC+    D+++N  ++       P    +++L+ C CN G++  A  +L  M 
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           +RKI  D  +++  I    +  ++ +A +L   MV  S+ P   TYS+ + G C     +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A ++F  + ++    D ++Y+ L++G C+ +++ E +EVF  MS+ G   ++ ++NILI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GL      D A  +     S G      TY  ++ GL K  + +  +VV   +      
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 580 LDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             +  Y I+I+ M +  K++D   LF N+ +K G+ PD     +++ G           +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              ++  D  + +S  YN LI    ++G    ++ L+  M   G+  DA+T GL+ 
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 204/483 (42%), Gaps = 5/483 (1%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+  F  M K    P+   F  ++  +   ++ D  +S+  +M +LGI      Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR ++L  A+ +   M  L   P+ +T   L+N  C + R+ +A  +++ M V 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P    F  ++ GL    K  E++  ++        P    +  ++   C  G   LA
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L KM   K+      +N  I  LC+ + +  A  L   M    + P+  TYS+ +  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C    + DA R+   +  + +  D  ++S L++   +  K+ EA +++  M K     S
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             +++ LI G C+  ++D+A ++     S        TY  ++ G  K +R ++ + V  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   G   +   Y ILIQ + +          F  MV  G+ P+  T  +LL GL    
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +L         L           YNI+I G+ K G       L   +  KG  PD   + 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 692 LLV 694
            ++
Sbjct: 541 TMI 543



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 145/325 (44%), Gaps = 5/325 (1%)

Query: 51  EAKIQSLRHNL-SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           E + + +R N+ +   LI  L N    S A ++   + I+++      T+  +I      
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKE 339

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G + E E L   MVK           SL+  F  H R++ A ++   M S      V  +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N ++    + KR   + + V++EM + G+V N  T N L++ LF+    + A + F+ M 
Sbjct: 400 NTLIKGFCKYKR-VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G  PN  T+  ++ GL  N +++ ++ +   +    ++  +  Y  +I  +C+  K+E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +   LF  +    + PD + Y  +I+  C     ++A+ + ++M   G  P    +  ++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578

Query: 350 RGLCEVGKFDESVNFLED--KCGYV 372
           R     G  + S   +++   CG+ 
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFA 603



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 41/266 (15%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    +   ++E + + + MV +  +P+V     +L+  F  + RV   M V   
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV-VTYNTLIKGFCKYKRVEEGMEVFRE 421

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNV------------- 202
           M+  G   +   +N+++  + +   G  D    ++KEMV  G+ PN+             
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQA--GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 203 ----------------------DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
                                  T N ++E + +  ++E   D F  +  KG  P+   +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I G       +++ ++  EM + G       Y  +I    R+   E +  L K MR+
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599

Query: 301 LDLMPDELTYEELINCLCENLRLDDA 326
                D  T   + N L +  RLD +
Sbjct: 600 CGFAGDASTIGLVTNMLHDG-RLDKS 624


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/646 (23%), Positives = 288/646 (44%), Gaps = 36/646 (5%)

Query: 54  IQSLRHNLSPDHLIRVLDNTN-DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           I  L    S D +  VL N   + +++L  F++VS Q+ F+    +YCK++  L      
Sbjct: 59  ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMY 118

Query: 113 EEMEGLCQNMV-----KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           +E       +V     K+R   + + L+ +       YR               F  S  
Sbjct: 119 DETRAYLNQLVDLCKFKDRGNVIWDELVGV-------YR--------------EFAFSPT 157

Query: 168 VFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           VF+++L   VE  +G   + ++V+  M K G +P++ + N LL  L +     +A   ++
Sbjct: 158 VFDMILKVYVE--KGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQ 215

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M + G  P+     I++     + +VD++   + +M +LG++  +  Y  +I       
Sbjct: 216 QMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLG 275

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV-IGLTPTDDVF 345
            +E A  + K M    +  + +TY  LI   C+  ++D+A  +L  M     L P +  +
Sbjct: 276 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 335

Query: 346 VDIVRGLCEVGKFDESVNFLED--KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMAD 401
             ++ G C  GK D++V  L++  + G  T+    N+L+   C  G+   A+ ++ +M D
Sbjct: 336 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD 395

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +  D  S+N  +   C      +A+ L  +M+   + P   TY+  + G C++  ++D
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL+++  +    +  D + YS L++GL ++E    A  ++  +   G + S  +FN +I 
Sbjct: 456 ALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC M K+ +A  +       G S    TY  ++ G  K         V   M  E  + 
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISP 575

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            +E Y  LI  + +  +L +       M   GL P+  T  +L+ G      L    S  
Sbjct: 576 SIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            ++  +    +  + + +++GL++ G   +A+ L+  M+  G+ PD
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 232/532 (43%), Gaps = 45/532 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G + E EG+   MV         +  +L+  +      + A  +   
Sbjct: 375 NGYCK-------RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 427

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G + +V  +N +L  +      F D + ++  M+K G+ P+    + LL+ LF+  
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVG-AFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKME 486

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E A   ++ +  +G   +  TF  +I GL    ++ ++  I  +M DLG   +   Y 
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C+ + + +A ++   M    + P    Y  LI+ L ++ RL +  D+L +M + 
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR 606

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDK----------CGYVTS---------PH 376
           GLTP    +  ++ G C+ G  D++ + + E            C  + S           
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666

Query: 377 NALLECCCNAGKFFLAKCILEK----MADRKIAD-----CDS--------WNIPIRWLCE 419
           N L++   + G F   +C L+      A +KIAD     C +        +NI I  LC+
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++  A      + +   VPD  TY   + G     N ++A R+  ++  + LV + ++
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ GLC+ E +  A  +F  + + G   +  ++N LI G C +  +D A +L+    
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             G S +  TY+ ++ GL K    +  + +L QM+  G    +  YC L+Q 
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 120/537 (22%), Positives = 224/537 (41%), Gaps = 41/537 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V +  EM++ G+  N+   N L+    +   I  A     RM      P+S ++  ++
Sbjct: 350 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 409

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G        ++ ++  +M   GI+  +  Y  ++  LCR    ++A++++ +M    + 
Sbjct: 410 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVA 469

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PDE+ Y  L++ L +    + A+ + +D++  G T +   F  ++ GLC++GK  E+   
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 365 LEDKCGYVTSP----HNALLECCC---NAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
            +       SP    +  L++  C   N G+ F  K  +E+  +      + +N  I  L
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER--EXISPSIEMYNSLISGL 587

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            ++  + +  +LL  M +  + P+  TY A + G CK    + A   + +++   L  + 
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNG------CSLSSS------------------ 513
           I  S +V GL ++ +I EA  +   M  +G      C L S                   
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707

Query: 514 --------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
                    +NI I GLC   KVD A R  S+    G      TY  ++ G        +
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
              +  +ML  G   ++  Y  LI  + +   +      F+ + + GL P+  T  +L+ 
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           G      +       +K++ +        Y+ LINGL K G   ++  LL+ M+  G
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/526 (22%), Positives = 220/526 (41%), Gaps = 38/526 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           + V VY+E       P V   + +L+V  E    ++AL  F  M K G  P+ R+   ++
Sbjct: 144 ELVGVYREF---AFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLL 198

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
             L+ N     +  +  +M  +GI  ++   + ++   C++ K++EA    K M  L + 
Sbjct: 199 NNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVE 258

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  LIN       ++ A  +L+ M   G++     +  +++G C+  K DE    
Sbjct: 259 PNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE---- 314

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEE 422
                                      A+ +L  M +    + D  ++ + I   C   +
Sbjct: 315 ---------------------------AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I  A  LL  M+   +  +    ++ + G CK     +A  V  ++   +L  DS SY+ 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++G C+    +EA  +   M + G   +  ++N L+ GLC +   D A+++  L    G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +     Y+ ++ GL K++  +    +   +L  G       +  +I  + +  K+ +  
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F+ M   G  PD  T  +L+ G    S +         +  +       MYN LI+GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA 708
           +K     + + LL  M  +G  P+  T+G L+     E +  + F+
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 253/588 (43%), Gaps = 75/588 (12%)

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           GF     ++  +   G+ P++ T N+LL  L + N ++ +   F  M   G  P+   F 
Sbjct: 142 GFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFS 201

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            ++       RVDD++ +  +M  +G+   +  Y  II  LC+  +L+EA +  + M   
Sbjct: 202 TMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKE 261

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + P  +TY  LIN L +  R D+AN IL++M   G  P + V+  ++ G C +G    +
Sbjct: 262 RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTA 321

Query: 362 VNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMAD---------------- 401
           +   +D      SP+    N+L++  C + +   A+ +LE+M                  
Sbjct: 322 LQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHR 381

Query: 402 -------------------RKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
                              R     D    + +  LC+N +  +A EL  R++      +
Sbjct: 382 LCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAAN 441

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T +A + G C+  + E+A ++ +++  + LVLDSISY+ L+   C+  K+ E  ++  
Sbjct: 442 TVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKE 501

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G      ++N+L++GLC M K+++A  L      +G      TY  ++ G  K  
Sbjct: 502 EMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKAN 561

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R ++   +  +M+      +   Y  LI++  E   +++     + M   G+     T  
Sbjct: 562 RVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYS 621

Query: 622 SLLHGLADG-----------------------------------SQLHLVSSGINKLVSD 646
           SL+HGL++                                     Q+H V S + ++  +
Sbjct: 622 SLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSIN 681

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +   +   Y I+ING  K G    A+ LL+ M  KG VPDA T+  L 
Sbjct: 682 NVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALT 729



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 258/598 (43%), Gaps = 41/598 (6%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ S V    V  + +V   M   G    V +F+ ++ A     R   D + ++++M K 
Sbjct: 168 LLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR-VDDAIELFRKMEKV 226

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ PNV T N ++  L +  R++ A     +M K+   P+  T+ ++I GL+   R D++
Sbjct: 227 GVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEA 286

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             IL EM D G       Y  +I   CR   +  A+++   M +  + P+ +T   LI  
Sbjct: 287 NCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQG 346

Query: 317 LCENLRLDDANDILEDMIVIG-----------------------------------LTPT 341
            C++ +++ A  +LE+M+  G                                     P 
Sbjct: 347 YCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPN 406

Query: 342 DDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           D +   +V GLC+ GK  E++      LE      T   NAL+   C AG    A  +L+
Sbjct: 407 DGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLK 466

Query: 398 KMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M +R +  D  S+N  I   C+  ++ + ++L   MV   + PD  TY+  + G C + 
Sbjct: 467 EMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMG 526

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             E+A  ++ +        D+ +Y  +++G C+  ++ E  ++F  M       ++  + 
Sbjct: 527 KIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYG 586

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI   C    + +A RLR    S G   T++TY+ ++ GL  +        +L +M  E
Sbjct: 587 TLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKE 646

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G + +V  Y  LI    +  ++         M    + P++ T   +++G      +   
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAA 706

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  +N++     V D+  YN L NG  KEG   +A  + DLM   G   D  T+  L+
Sbjct: 707 AKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/534 (23%), Positives = 255/534 (47%), Gaps = 17/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++ +M+++  +P+V     L+ V+    R +  +  +++M +K    + 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG+  ++  +T ++  LC E+++ EA+  F  
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL PT   +  IV G+C+ G 
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++N L   ++  ++      ++A+++  C  G+   A+ +  +M ++ I  D  ++N
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +     A +LL  M+   + PD  TY+A +    K   + +A  ++ ++  +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR 354

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+Y+ +++G C+ +++  A ++F  M+  GCS    +F  LI G C  +++D  
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 414

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L       G    T TY  ++ G   +      L +  QM+  G   D+     L+  
Sbjct: 415 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 474

Query: 592 MSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           + +  KLKD    F  M K+           G+ PD  T   L+ GL +  +        
Sbjct: 475 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 534

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V D+  Y+ +I+GL K+    +A+ +   M  K + P+  T   L+
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 270/578 (46%), Gaps = 25/578 (4%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           SV  F  ++G +V  +R   D V  +Y++M +  I  ++ + N L++     +++  AL 
Sbjct: 78  SVVDFCKLMGVVVRMER--PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALS 135

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F ++ K G  P+  TF  ++ GL    RV +++    +MF+   +  +  +T ++  LC
Sbjct: 136 TFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI-VIGLTPTD 342
           RE ++ EA+ L   M    L P ++TY  +++ +C+      A ++L  M  V  + P  
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
            ++  I+  LC+ G+  ++ N   +       P    +N+++   C++G++  A+ +L++
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 399 MADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M +RKI+ D  ++N  I    +  +  +A EL   M+   ++P+  TY++ + G CK   
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A  +F  ++ +    D  +++ L++G C  ++I + +E+   M + G   ++ ++N 
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML--- 574
           LI+G C++  ++ A+ L     SSG      T   ++ GL    + KD L +   M    
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 575 --------VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                     G   DV  Y ILI  +  + K  +    +  M   G+VPD  T  S++ G
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L   S+L   +     + S S   +   +N LING  K G       L   M  +G V D
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 687 AT-----THGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           A       +G     ++   +D  +    S  +PD+++
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 653



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 151/670 (22%), Positives = 285/670 (42%), Gaps = 67/670 (10%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMIL---KLGLAGNVEEMEGL------CQNMVKER-Y 127
           SA ++F   SI+      +   C+       L L     E++GL        +M++ R  
Sbjct: 17  SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPL 76

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADF 186
           P+V +    L+   V   R +  + +   M     +  +  FN+++       K  FA  
Sbjct: 77  PSVVD-FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFA-- 133

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +  + ++ K G+ P+V T   LL  L   +R+  ALD F +M +  C PN  TF  ++ G
Sbjct: 134 LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMP 305
           L    R+ ++V++L  M + G+Q     Y  I+  +C++     A+ L + M  +  ++P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + + Y  +I+ LC++ R  DA ++  +M   G+ P    +  ++ G C  G++ ++   L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
           ++      SP    +NAL+      GKFF A  + ++M  R I  +  ++N  I   C+ 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + +  A ++   M      PD  T++  + G C     +D + +  ++  + LV ++++Y
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 433

Query: 481 SKLVEGLCQVE-----------------------------------KITEAVEVFCCMSK 505
           + L+ G C V                                    K+ +A+E+F  M K
Sbjct: 434 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493

Query: 506 NGCSLSSS-----------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +   L +S           ++NILI GL    K  +A  L       G    T TY+ ++
Sbjct: 494 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW-KEGLTSQASY 673
            D    ++L++G      ++       +++S     D+     ++ G W KE L    + 
Sbjct: 614 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 673

Query: 674 LLDLMLGKGW 683
           L DL +  G+
Sbjct: 674 LEDLQMSVGY 683



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ ++ AI L S    S    +   + K+M  +V+++R   ++ +  +M  +    
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ ++ ILI+     +KL      F  + K GL PD  T  +LLHGL    ++       
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   +   +   +  L+NGL +EG   +A  LLD M+  G  P   T+G +V
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 234/492 (47%), Gaps = 19/492 (3%)

Query: 98  TYCKMILKLGLAGNV-EEMEGLCQNMVKERYPNV--REALISLVFSFVNHYRVNGAMRVL 154
           +YCK  L+   A  V  EME  C       +P+V     LI   F   +   V+ A+ ++
Sbjct: 166 SYCKS-LEFDKADTVISEMEKRCV------FPDVVTHNVLIDARFRAGD---VDAAIALV 215

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
            +M + G K  +  FN VL  + + +R F     V++ M +  + P+V + N L+     
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRR-FDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              +E A+  ++ M ++G  P+  +F  +I       ++D + + L EM  LG+  +   
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT +I   CR   + EA+R+   M  L  +PD +TY  L+N LC+  RL DA ++L +M 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G+TP    F  ++ G C  G F++++   +        P    +N+L++  C  G   
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  + + M  R+I  +  +++I I   CE  ++ +A+  L  MV    +P+  TY++ +
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G C+  N +   +  +++   +++ D I+++ L+ G  + E +  A  VF  M K    
Sbjct: 515 KGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ 574

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
             + ++N++I G      +++A R+     +SG      TY  ++ G V    +K+   +
Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQL 634

Query: 570 LAQMLVEGCALD 581
             +M+  G A D
Sbjct: 635 HDEMMHRGFAPD 646



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 217/498 (43%), Gaps = 30/498 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  EM K  + P+V T N L++  F    +++A+     M  KG  P   TF  V+KGL 
Sbjct: 179 VISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLC 238

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + R D +  +   M    +  ++  +  +I   CR  ++EEA++ +K M+   + PD +
Sbjct: 239 KHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVV 298

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           ++  LI       ++D A   L +M  +GL P   ++  ++ G C  G   E++   ++ 
Sbjct: 299 SFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            G         L C                     + D  ++N  +  LC+   +  A E
Sbjct: 359 VG---------LGC---------------------LPDVVTYNTLLNGLCKQHRLLDAEE 388

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL  M    V PD  T++  + G C+  N+E AL++F  +  Q L  D ++Y+ L++G+C
Sbjct: 389 LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMC 448

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   + +A E++  M       +  +++ILI   C   +V++A        S G      
Sbjct: 449 RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIM 508

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  I+ G  +    K     L +M+ +    D+  +  LI    ++  +      FN+M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIM 568

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
            K  + PD  T   +++G ++   +        K+ +     D   Y  LING    G +
Sbjct: 569 EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNS 628

Query: 669 SQASYLLDLMLGKGWVPD 686
            +A  L D M+ +G+ PD
Sbjct: 629 KEAFQLHDEMMHRGFAPD 646



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/477 (21%), Positives = 197/477 (41%), Gaps = 15/477 (3%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P  + F+++I+    + +  ++      + D  + +  S    ++  L R      A   
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRG 351
           ++++ + D   +  T   +++  C++L  D A+ ++ +M    + P   T +V +D    
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID---A 201

Query: 352 LCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
               G  D ++  ++       K G VT   N++L+  C   +F  AK +   M    +A
Sbjct: 202 RFRAGDVDAAIALVDSMANKGLKPGIVT--FNSVLKGLCKHRRFDKAKEVFRAMDQCSVA 259

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S+NI I   C   E+ +A +    M    V PD  ++S  +         + A   
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
            R++    LV D + Y+ ++ G C+   ++EA+ V   M   GC     ++N L+ GLC 
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             ++  A  L +     G +    T+T ++ G  +    +  L +   +L +    DV A
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  LI  M  +  L      ++ M    + P+  T   L+    +  Q+      ++++V
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           S   + +   YN +I G  + G   +    L  M+    +PD  T   L+   + EE
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE 556



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 119/307 (38%), Gaps = 45/307 (14%)

Query: 43  KSHQTTDYEAKIQSLR-HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTA 96
           K H+  D E  +  ++   ++PD      LI       +   AL++F  + + +R +   
Sbjct: 379 KQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL-LHQRLRPDV 437

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
             Y  +I  +   G++ +   L  +M  +E +PN     I L+ S     +V  A   L 
Sbjct: 438 VAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSI-LIDSHCEKGQVEEAFGFLD 496

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M S G   ++  +N ++              F+ K M++  I+P++ T N L+    + 
Sbjct: 497 EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQK-MMQDNILPDLITFNTLIHGYIKE 555

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             +  A + F  M K+   P++ T+ ++I G                             
Sbjct: 556 ENMHGAFNVFNIMEKEMVQPDAVTYNMIING----------------------------- 586

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
                    +  +EEA R+FK M A  + PD  TY  LIN         +A  + ++M+ 
Sbjct: 587 ------FSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640

Query: 336 IGLTPTD 342
            G  P D
Sbjct: 641 RGFAPDD 647



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/305 (19%), Positives = 122/305 (40%), Gaps = 41/305 (13%)

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           E++  ++ SS  P    +   +    +     +A   FR +    + + + + + L+  L
Sbjct: 73  EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAAL 132

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV-------------MRK------- 527
            +      A E +  +  +   +++ + NI+++  C              M K       
Sbjct: 133 SRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDV 192

Query: 528 ---------------VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLVV 569
                          VD AI L     + G      T+  ++ GL K +R   AK++   
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRA 252

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           + Q  V   A DV ++ ILI       ++++   F+  M + G+ PD  +   L+   + 
Sbjct: 253 MDQCSV---APDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             ++   ++ + ++     V D  +Y ++I G  + G  S+A  + D M+G G +PD  T
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369

Query: 690 HGLLV 694
           +  L+
Sbjct: 370 YNTLL 374


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 159/673 (23%), Positives = 300/673 (44%), Gaps = 18/673 (2%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           +SP  ++++L    + ++AL IF        + H    +  ++ +L     V  +  +  
Sbjct: 8   ISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVD 67

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEE 179
            M  +R     +  +S + ++      + A+ +  NM +  G    +  FN +L A +E 
Sbjct: 68  LMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIES 127

Query: 180 KRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            +   A+  F Y +   AG+ PN+ T N L+++  +  + E        M + G  P+  
Sbjct: 128 NQWREAELFFTYFQ--TAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDIL 185

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-M 297
           ++  +I  L  +  + D+V +  EM   G+  ++  Y  +I    R+    +A  ++K +
Sbjct: 186 SYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRL 245

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           +    + P   TY  +IN LC+  +LD++ ++   M     +P    F  ++ GL + G 
Sbjct: 246 LTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGN 305

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC--ILEKMADRKIADCDSWN 411
           F+ +    ++      SP    +NA+L      GK  L KC  +   M+     +  S+N
Sbjct: 306 FNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGK--LNKCFELWNVMSKNNCCNIVSYN 363

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           + I+ L +N+++ +A      +    +  D  TY   + G CK      ALR+  +   +
Sbjct: 364 MLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENE 423

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
              LD+ +YS +V GLC+   + +AVE+   M KN   L+S  FN LI G     K+++A
Sbjct: 424 GADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEA 483

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           I +     S   + T  +Y  I+ GL K +R  D  + L +ML EG   D+  Y +LI  
Sbjct: 484 ISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDG 543

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +    K+      ++  +   L PD +    ++HGL    ++ +      ++   + V D
Sbjct: 544 LCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPD 603

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRR 706
              +N ++ GL+K G   +A  + D +L  G  PD  ++     GL   + V + I+   
Sbjct: 604 LVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLY 663

Query: 707 FAFDSSSFPDSVS 719
            A D    P++ +
Sbjct: 664 DALDRGILPNAPT 676



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 184/420 (43%), Gaps = 41/420 (9%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V++EM+++G+ P+V T N +L  LF T ++    + +  M K  CC N  ++ ++I+GL+
Sbjct: 312 VFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLL 370

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            N +V                                   E+AI  ++++    L  D  
Sbjct: 371 DNKKV-----------------------------------EQAICYWQLLHERGLKADST 395

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
           TY  LIN LC+N  L+ A  ILE+    G       +  +V GLC+ G  +++V  +   
Sbjct: 396 TYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQM 455

Query: 366 -EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEI 423
            +++    +   N+L+     A K   A  +L +M  +  A    S+N  I  LC+ E  
Sbjct: 456 KKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERF 515

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             AY  L  M+   + PD  TYS  + G C+    + AL ++ Q   + L  D   ++ +
Sbjct: 516 SDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNII 575

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC  +K+  A+E+F  M +  C     + N ++ GL       +A+++      +G 
Sbjct: 576 IHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGL 635

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                +Y     GL    R  D +  L   L  G   +   + +L++++ +   L + AL
Sbjct: 636 QPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYAL 695


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 256/536 (47%), Gaps = 8/536 (1%)

Query: 165  SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            S+  F+ +L AI +  + F   + + ++M   GI  N  T + L+      +++  AL  
Sbjct: 694  SIIEFSKLLSAIAKMNK-FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752

Query: 225  FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              +M K G  PN  T   ++ G   + R+ ++V+++ +MF  G Q     +  +I  L  
Sbjct: 753  LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812

Query: 285  ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             NK  EA+ L   M A    PD +TY  ++N LC+    D A ++L  M    L P   +
Sbjct: 813  HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 872

Query: 345  FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
            +  I+ GLC+    D+++N  ++       P    +++L+ C CN G++  A  +L  M 
Sbjct: 873  YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932

Query: 401  DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            +RKI  D  +++  I    +  ++ +A +L   MV  S+ P   TYS+ + G C     +
Sbjct: 933  ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992

Query: 460  DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            +A ++F  + ++    D ++Y+ L++G C+ +++ E +EVF  MS+ G   ++ ++NILI
Sbjct: 993  EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052

Query: 520  YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             GL      D A  +     S G      TY  ++ GL K  + +  +VV   +      
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112

Query: 580  LDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
              +  Y I+I+ M +  K++D   LF N+ +K G+ PD     +++ G           +
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADA 1171

Query: 639  GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               ++  D  + +S  YN LI    ++G    ++ L+  M   G+  DA+T GL+ 
Sbjct: 1172 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 1227



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/610 (24%), Positives = 278/610 (45%), Gaps = 64/610 (10%)

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMVKAGIVPN 201
           ++V+ A+ +L  M     KL  +   V +G++V     +   +D V +  +MV+ G  P+
Sbjct: 237 FQVSLALSILGKM----LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 292

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           +   N +++ L +T R+  A D F+ + +KG  PN  T+  ++ GL  +SR  D+  +L 
Sbjct: 293 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 352

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +M    I   +  Y+ ++    +  K+ EA  LF+ M  + + PD +TY  LIN LC + 
Sbjct: 353 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 412

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHN 377
           R+D+AN + + M+  G       +  ++ G C+  + ++ +    +  + G V  T  +N
Sbjct: 413 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 472

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            L++    AG    A+    +M    I+ D  ++NI +  LC+N E+ KA  +   M   
Sbjct: 473 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            +  D  TY+  + G CK    E+A  +F  +S + L  D ++Y+ ++ GLC    + E 
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 592

Query: 497 VEVFCCMS-----KNGCSLSSSSFNI---LI-------YGLCVMRKVDKAIRLRSL---- 537
             ++  M      KN C+LS     +   LI       Y   +++ +   +  ++L    
Sbjct: 593 EALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLR 652

Query: 538 AYSSGTSY---------------------------------TTSTYTKIMLGLVKLQRAK 564
           A+S  TSY                                 +   ++K++  + K+ +  
Sbjct: 653 AFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD 712

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
            ++ +  QM   G   +   Y ILI     +++L         M+K G  P+  T+ SLL
Sbjct: 713 VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL 772

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           +G     ++    + ++++       ++  +N LI+GL+     S+A  L+D M+ KG  
Sbjct: 773 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 832

Query: 685 PDATTHGLLV 694
           PD  T+G++V
Sbjct: 833 PDLVTYGVVV 842



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 213/437 (48%), Gaps = 5/437 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + ++ +MVK+   P++   N LL  + +  + +  +   ++M   G   +  TF IVI
Sbjct: 171 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +V  ++SILG+M  LG + +      ++   CR N++ +A+ L   M  +   
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD + Y  +I+ LC+  R++DA D  +++   G+ P    +  +V GLC   ++ ++   
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L D      +P    ++ALL+     GK   AK + E+M    I  D  +++  I  LC 
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 410

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           ++ I +A ++   MV    + D  +Y+  + G CK    ED +++FR++S + LV ++++
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 470

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G  Q   + +A E F  M   G S    ++NIL+ GLC   +++KA+ +     
Sbjct: 471 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 530

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TYT ++ G+ K  + ++   +   + ++G   D+  Y  ++  +  +  L 
Sbjct: 531 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 590

Query: 600 DCALFFNVMVKAGLVPD 616
           +    +  M + GL+ +
Sbjct: 591 EVEALYTKMKQEGLMKN 607



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 225/499 (45%), Gaps = 6/499 (1%)

Query: 137  LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
            L+  F    ++  A+ VL  M   G++ ++   + +L      KR  ++ V +  +M   
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR-ISEAVALVDQMFVT 794

Query: 197  GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            G  PN  T N L+  LF  N+   A+    RM  KGC P+  T+ +V+ GL      D +
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 257  VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             ++L +M    ++  +  Y  II  LC+   +++A+ LFK M    + P+ +TY  LI+C
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 317  LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
            LC   R  DA+ +L DMI   + P    F  ++    + GK  E+    ++       P 
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 376  ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
               +++L+   C   +   AK + E M  +    D  ++N  I+  C+ + + +  E+  
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034

Query: 432  RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
             M    +V +  TY+  + G  +  + + A  +F+++ +  +  + ++Y+ L++GLC+  
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094

Query: 492  KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            K+ +A+ VF  + ++    +  ++NI+I G+C   KV+    L       G       Y 
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154

Query: 552  KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
             ++ G  +    ++   +  +M  +G   +   Y  LI++       +  A     M   
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 1214

Query: 612  GLVPDRETMLSLLHGLADG 630
            G   D  T+  + + L DG
Sbjct: 1215 GFAGDASTIGLVTNMLHDG 1233



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 195/450 (43%), Gaps = 9/450 (2%)

Query: 252  RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            ++DD+V++ GEM        +  ++ ++  + + NK +  I L + M+ L +  +  TY 
Sbjct: 675  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 312  ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
             LINC C   +L  A  +L  M+ +G  P       ++ G C   +  E+V  ++     
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 372  VTSPHNALLECCCNAGKFFLAKCILEKMA--DRKIA-----DCDSWNIPIRWLCENEEIR 424
               P+        +    FL     E MA  DR +A     D  ++ + +  LC+  +  
Sbjct: 795  GYQPNTVTFNTLIHG--LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 425  KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
             A+ LL +M    + P    Y+  + G CK  + +DAL +F+++  + +  + ++YS L+
Sbjct: 853  LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 485  EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              LC   + ++A  +   M +   +    +F+ LI       K+ +A +L          
Sbjct: 913  SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972

Query: 545  YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             +  TY+ ++ G     R  +   +   M+ + C  DV  Y  LI+   +  ++++    
Sbjct: 973  PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032

Query: 605  FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            F  M + GLV +  T   L+ GL       +      ++VSD    +   YN L++GL K
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092

Query: 665  EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             G   +A  + + +      P   T+ +++
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 1122



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 175/420 (41%), Gaps = 40/420 (9%)

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DK 368
           E L      +++L+DA D+  DM+     P+   F  ++  + ++ K+D  ++  +  + 
Sbjct: 157 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 216

Query: 369 CGYVTSPH--NALLECCCNAGKFFLAKCILEKM------ADR--------------KIAD 406
            G     +  N ++ C C   +  LA  IL KM       DR              +++D
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 276

Query: 407 CDS----------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
             S                +N  I  LC+ + +  A++    +    + P+  TY+A V 
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C    + DA R+   +  + +  + I+YS L++   +  K+ EA E+F  M +     
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              +++ LI GLC+  ++D+A ++  L  S G      +Y  ++ G  K +R +D + + 
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G   +   Y  LIQ   +   +     FF+ M   G+ PD  T   LL GL D 
Sbjct: 457 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 516

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L         +      LD   Y  +I G+ K G   +A  L   +  KG  PD  T+
Sbjct: 517 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 1/247 (0%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++   LV G C+  ++++AV +   M + G      ++N +I  LC  ++V+ A    
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 316

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TYT ++ GL    R  D   +L+ M+ +    +V  Y  L+ +  + 
Sbjct: 317 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 376

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+ +    F  MV+  + PD  T  SL++GL    ++   +   + +VS   + D   Y
Sbjct: 377 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 436

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSF 714
           N LING  K         L   M  +G V +  T+  L+ G     ++D  +  F    F
Sbjct: 437 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 496

Query: 715 PDSVSDI 721
                DI
Sbjct: 497 FGISPDI 503



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 112/273 (41%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++  A +L   MV S   P    ++  +    KL  Y+  + + +++    +  D  +++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++   C   +++ A+ +   M K G      +   L+ G C   +V  A+ L       
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  I+  L K +R  D      ++  +G   +V  Y  L+  +   ++  D 
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           A   + M+K  + P+  T  +LL       ++        ++V  S   D   Y+ LING
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L       +A+ + DLM+ KG + D  ++  L+
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 440



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 103/266 (38%), Gaps = 41/266 (15%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  +I    +   ++E + + + MV K  +P+V     +L+  F  + RV   M V   
Sbjct: 977  TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV-VTYNTLIKGFCKYKRVEEGMEVFRE 1035

Query: 157  MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNV------------- 202
            M+  G   +   +N+++  + +   G  D    ++KEMV  G+ PN+             
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQA--GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093

Query: 203  ----------------------DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
                                   T N ++E + +  ++E   D F  +  KG  P+   +
Sbjct: 1094 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 1153

Query: 241  EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
              +I G       +++ ++  EM + G       Y  +I    R+   E +  L K MR+
Sbjct: 1154 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 1213

Query: 301  LDLMPDELTYEELINCLCENLRLDDA 326
                 D  T   + N L +  RLD +
Sbjct: 1214 CGFAGDASTIGLVTNMLHDG-RLDKS 1238


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/620 (24%), Positives = 273/620 (44%), Gaps = 60/620 (9%)

Query: 82  IFKWVSIQKRFQHTADTYCKMILK-LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS 140
           +F   S+ ++F     T C ++L  L   G + + E + Q M   R PN      +++  
Sbjct: 216 LFLKESLDRKFPLDVTT-CNIVLNSLCTQGKLSKAESMLQKMKNCRLPNA-VTYNTILNW 273

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
           +V   R   A+R+L +M   G +  +  +N+++  + + KR    ++ + K M +  + P
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL-KRMREVNLTP 332

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +  + N L+   F   +I  A+  F +M ++   P+  T+  +I G   N R D++  +L
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM   G+               R  ++ +A ++ K M A  + PD +TY  LIN +C+ 
Sbjct: 393 YEMQITGV---------------RPREVSKAKQILKCMLADGIDPDVITYSALINGMCKM 437

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--H 376
             + +  +IL  M   G+ P + ++  +V   C+ G   E++ +  D  + G V +   H
Sbjct: 438 GMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIH 497

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NALL      G    A+   + M+  KI+ D  S+N  I   C+   + +A+ +   MV 
Sbjct: 498 NALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 557

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD  T                                   Y  L+ GLCQ   + +
Sbjct: 558 HGWPPDICT-----------------------------------YGSLLRGLCQGGHLVQ 582

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E    + +  C++   + N L+ G+C    +D+A+ L     +      T TYT ++ 
Sbjct: 583 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 642

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN-VMVKAGLV 614
           G  K  +    L++L  ML +G   D  AY  L+  +  + ++K  +  F  ++ K GL 
Sbjct: 643 GFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 702

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            D     S+++G   G Q++ +   +  +  +     S+ YNIL++G  K+G  S+  YL
Sbjct: 703 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 762

Query: 675 LDLMLGKGWVPDATTHGLLV 694
              M+ +G  PD  T+ LL+
Sbjct: 763 YRDMVKEGIKPDNVTYRLLI 782



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 155/601 (25%), Positives = 267/601 (44%), Gaps = 29/601 (4%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY-KEMVK 195
           LV ++V   +V  A   +  M+  GFK S+   N +L A+V   +  +++V+++ KE + 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINK--SEYVWLFLKESLD 223

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVD 254
                +V T N +L  L    ++  A    ++M  K C  PN+ T+  ++   +   R  
Sbjct: 224 RKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCK 281

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ IL +M   GI+ +L  Y  +I  LC+  +   A  L K MR ++L PDE +Y  LI
Sbjct: 282 SALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLI 341

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +      +++ A  I   M+   L P+   +  ++ G C  G+ DE+   L +       
Sbjct: 342 HGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVR 401

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           P         +  K  L KC+L   AD    D  +++  I  +C+   I +  E+L RM 
Sbjct: 402 PREV------SKAKQIL-KCML---ADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            S V+P+   Y+  V   CK  + ++AL+ F  +    LV +S+ ++ L+    +   I 
Sbjct: 452 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 511

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA +    MS+   S   +SFN +I   C    V +A  +       G      TY  ++
Sbjct: 512 EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 571

Query: 555 LGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            GL +   L +AK+ +V L   L + CA+D +    L+  + +   L +       MV  
Sbjct: 572 RGLCQGGHLVQAKEFMVYL---LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 628

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            ++PD  T   LL G     ++      +  ++    V D+  Y  L+NGL  EG    A
Sbjct: 629 NILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAA 688

Query: 672 SYLL-DLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVS-DILAE 724
           SY+  +++  +G   D   +     G L G  + E     R   ++  +P S S +IL  
Sbjct: 689 SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMH 748

Query: 725 G 725
           G
Sbjct: 749 G 749



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 213/472 (45%), Gaps = 11/472 (2%)

Query: 162 FKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
            K+S DV  FN ++ +  +       F  VY  MV+ G  P++ T   LL  L +   + 
Sbjct: 523 MKISFDVASFNCIIDSYCQRGNVLEAFS-VYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 581

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A +    + +K C  + +T   ++ G+  +  +D+++ +  +M    I  +   YT ++
Sbjct: 582 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 641

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI-GL 338
              C+  K+  A+ L +MM    L+PD + Y  L+N L    ++  A+ + +++I   GL
Sbjct: 642 DGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGL 701

Query: 339 TPTDDVFVDIVRGLCEVGKFDE----SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
                 +  ++ G  + G+ +E      N  E++    ++ +N L+      G+      
Sbjct: 702 YADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 761

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV--SSVVPDCATYSAFVLG 451
           +   M    I  D  ++ + I  LCE   I  A + L +MV+  S + P    Y A +  
Sbjct: 762 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINA 821

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
           KC++ + + A  +   + A  +V   ++ S +V GLC+  K+ EA+ VF  + + G   +
Sbjct: 822 KCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPT 881

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            ++F  L++GLC   K+D A  L+ L  S G      TY  ++ GL   +   D L +  
Sbjct: 882 IATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYE 941

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           +M  +G   ++  Y  L  +M     ++D       +   G+VP  +   SL
Sbjct: 942 EMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL 993



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 132/623 (21%), Positives = 256/623 (41%), Gaps = 62/623 (9%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVF- 188
           +L+  F    ++N A+ +   M     K SV  +  ++      G   E +R   +    
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398

Query: 189 ------------VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
                       + K M+  GI P+V T + L+  + +   I    +   RM K G  PN
Sbjct: 399 GVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPN 458

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           +  +  ++          +++    +++  G+      +  ++    RE  + EA +  +
Sbjct: 459 NVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQ 518

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M  + +  D  ++  +I+  C+   + +A  + ++M+  G  P    +  ++RGLC+ G
Sbjct: 519 YMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGG 578

Query: 357 KFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++  F    LE  C       N LL   C  G    A  + EKM  R I  D  ++ 
Sbjct: 579 HLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYT 638

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SA 470
           I +   C+  +I  A  LL  M+   +VPD   Y+  + G       + A  +F+++   
Sbjct: 639 ILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 698

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + L  D I+Y+ ++ G  +  +I E   +   M +N    SS+S+NIL++G     ++ +
Sbjct: 699 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 758

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL---------- 580
            + L       G      TY  ++ GL +    +  +  L +M++E   L          
Sbjct: 759 TLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIAL 818

Query: 581 ------------------DVEAYCILIQSMSEQN---------KLKDCALFFNVMVKAGL 613
                             D++A  ++   ++E +         K+++  + F+ +++AG+
Sbjct: 819 INAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGM 878

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
           VP   T  +L+HGL    ++         + S    +D   YN+LI GL  +     A  
Sbjct: 879 VPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALD 938

Query: 674 LLDLMLGKGWVPDATTHGLLVGS 696
           L + M  KG +P+ TT+  L G+
Sbjct: 939 LYEEMKSKGLLPNITTYITLTGA 961



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 113/536 (21%), Positives = 227/536 (42%), Gaps = 13/536 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  +   G + E + +   M K           +LVF F        A++  V++
Sbjct: 426 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 485

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G   +  + N +L +   E    A+     + M +  I  +V + N +++   +   
Sbjct: 486 YRSGLVANSVIHNALLCSFYREGM-IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 544

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +  A   +  M + G  P+  T+  +++GL     +  +   +  + +    ++      
Sbjct: 545 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 604

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  +C+   L+EA+ L + M   +++PD  TY  L++  C+  ++  A  +L+ M+  G
Sbjct: 605 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKG 664

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLED---KCGYVTS--PHNALLECCCNAGKFFLA 392
           L P    +  ++ GL   G+   +    ++   K G       +N+++      G+    
Sbjct: 665 LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 724

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + ++  M + ++     S+NI +    +  ++ +   L   MV   + PD  TY   + G
Sbjct: 725 ERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFG 784

Query: 452 KCKLCNYEDALRVFRQ--VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            C+    E A++   +  +    L      Y  L+   C+V  I  A E+   M   G  
Sbjct: 785 LCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVV 844

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            S  + + ++ GLC   KV++AI + S    +G   T +T+T +M GL K  +  D   +
Sbjct: 845 PSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHL 904

Query: 570 LAQMLVEGCAL--DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
             + L+E C L  DV  Y +LI  +  +  + D    +  M   GL+P+  T ++L
Sbjct: 905 --KQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 958


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 241/501 (48%), Gaps = 5/501 (0%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           +K    + V + K+M   G+ P+V T + L++   +  R   A + F  M ++G  P++ 
Sbjct: 202 DKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAY 261

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  ++ G      + D   +L  M   GI LE   +  +I    +   L++A+  F  M
Sbjct: 262 TYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM 321

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           R     P+ +TY  +I+ LC+  R++DA      M+  GL+P    F  ++ GLC +G++
Sbjct: 322 RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW 381

Query: 359 DESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
            +      +       P+    N +++  C  G+   A    +++    +  D  S+ I 
Sbjct: 382 KKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I   C + ++ ++ +LLGRMV   + PD  TYSA + G CK    +DAL ++R++ ++ +
Sbjct: 442 IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV 501

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             ++I+Y+ ++ GL    ++  A E +  +  +G  L  +++NI++ GLC    VD+A+R
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +     S        T+  +++GL+K+ R  D   + + +L  G   D   Y ++IQS  
Sbjct: 562 MFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHI 621

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           E+  L++    F  M K G   +  T+ +++  L +   +    + + K+      +++S
Sbjct: 622 EEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEAS 681

Query: 654 MYNILINGLWKEGLTSQASYL 674
              +LI+ + +     +  +L
Sbjct: 682 TAVLLISIVSERKYQKEVKFL 702



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 219/506 (43%), Gaps = 24/506 (4%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV + N ++  LF+   ++ A   F  M  +G  PN  T+  VI GL     +D + ++
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L +MFD G                   +LEEA+RL K M    L PD +TY  LI+  C+
Sbjct: 197 LQQMFDKG-------------------QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCK 237

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSP 375
             R  +A +I + M+  G  P    +  ++ G    G   +  + L    +D        
Sbjct: 238 IGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV 297

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N L+           A     +M  +  + +  ++   I  LC+   +  A     +MV
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              + PD  T+++ + G C +  ++   ++  ++  + +  ++I  + +++ LC+  ++ 
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVL 417

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA + F  +   G      S+ ILI G C+  K+D++I+L     S G      TY+ ++
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G  K  R  D L +  +M  +    +   Y I++  +    ++     F+  +V +G+ 
Sbjct: 478 NGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQ 537

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
               T   +L GL + S +         L S    L+   +NI+I GL K G    A  L
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSL 597

Query: 675 LDLMLGKGWVPDATTHGLLVGSSVGE 700
              +L  G VPDA  +GL++ S + E
Sbjct: 598 FSAILPSGLVPDAIIYGLMIQSHIEE 623



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/468 (21%), Positives = 183/468 (39%), Gaps = 106/468 (22%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LIR       L  A+  F  +  QK F     TY  +I  L  AG VE+           
Sbjct: 301 LIRAYAKNETLDKAMTAFIEMR-QKGFSPNVVTYTTVIDILCKAGRVEDA---------- 349

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGF 183
                           V+H+           M S G    +  F  ++  +  + E +  
Sbjct: 350 ----------------VSHFS---------QMVSEGLSPDIITFTSLIHGLCTIGEWKKV 384

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
               F   EM+  GI PN   LN +++ L +  R+  A D F ++   G  P+  ++ I+
Sbjct: 385 EKLSF---EMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I G   + ++D+S+ +LG M  +G++ +   Y+ ++   C+  ++++A+ L++ M + D+
Sbjct: 442 IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV 501

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+ +TY  +++ L    R+  A +    ++  G+    + +  ++ GLCE    DE++ 
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
             +                   + +F L              +  ++NI I  L +   I
Sbjct: 562 MFQG----------------LRSKEFQL--------------EVRTFNIMIVGLLKVGRI 591

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  L   ++ S +VPD   Y   +                               S +
Sbjct: 592 GDAKSLFSAILPSGLVPDAIIYGLMI------------------------------QSHI 621

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            EGL +     E+ E+F  M KNGC+ +S + N ++  L     V +A
Sbjct: 622 EEGLLE-----ESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 99/250 (39%), Gaps = 26/250 (10%)

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVE--------VFCCMSKNG--CSLSSSSFN 516
           QV    L  D+ ++  L+   C V  +  A+E            M+ +G  C  +  S+N
Sbjct: 84  QVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYN 143

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           ++I GL    +VDKA  L       G      TY  ++ GL K Q       VL QM  +
Sbjct: 144 MVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDK 203

Query: 577 ----------------GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
                           G   DV  Y +LI    +  +  +    F+ MV+ G  PD  T 
Sbjct: 204 GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTY 263

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +LLHG A    L  +   +  ++ D   L+  ++NILI    K     +A      M  
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQ 323

Query: 681 KGWVPDATTH 690
           KG+ P+  T+
Sbjct: 324 KGFSPNVVTY 333



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 74/149 (49%), Gaps = 2/149 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A+R+   + S  F+L V  FN+++  +++  R   D   ++  ++ +G+VP+     
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGR-IGDAKSLFSAILPSGLVPDAIIYG 614

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            +++   E   +E + + F  M K GC  NSRT   +++ L+    V  + + L ++ + 
Sbjct: 615 LMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLF 295
              +E S    +I ++  E K ++ ++  
Sbjct: 675 EYSVEASTAVLLISIVS-ERKYQKEVKFL 702


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 199/423 (47%), Gaps = 6/423 (1%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G  D V+  Y +M+ AG VPN  T  YLL  L +  R E A   FR M  +GC PN  
Sbjct: 29  KSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF 88

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++ I+I GL    +VD++  +L EM D G Q  +  Y  ++  LC+  KL+EA+ LF  M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD + Y  LI+   +   + +A  + E+M+  G  PT   +  ++ G    G+F
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 359 DESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIP 413
               +  +D       P+    N LL+  C  G    A +  LE  +     D  S+N  
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +R +C   +  +A  LL  M+ S V PD  +Y+  + G  K    + A+++F ++    L
Sbjct: 269 MRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D+ SYS +++ LC+  K+  A  VF  M  NG +  ++    L+ GLC   ++ ++  
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCE 388

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L               Y  +M  L K +R+ D+  +  ++   G + DVE   ++++++ 
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 594 EQN 596
             +
Sbjct: 449 RSD 451



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 175/417 (41%), Gaps = 40/417 (9%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           + NYLLEVL ++ R +     +  M   GC PN+ T+  +++ L                
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSL---------------- 62

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
                              C+  + EEA  +F+ M A    P+  +Y  LI  LC   ++
Sbjct: 63  -------------------CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKV 103

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
           D+A ++L +MI  G  P    +  ++ GLC++GK  E+V+           P    +N L
Sbjct: 104 DEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVL 163

Query: 380 LECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++     G    A  + E+M ++  I    ++N  +       E  +   L   M+    
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           VP+  T++  + G CK+ +  +A R+F ++ +     D +SY+ L+ G+C   K  EA  
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQR 283

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M ++G      S+NILI G      +D AI+L      SG      +Y+ I+  L 
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           +  +     VV   M+  G A D      L+  +    +L +    F  MVK   VP
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 191/452 (42%), Gaps = 35/452 (7%)

Query: 80  LKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLV 138
           +  F+W   Q  + H   +Y  ++  L  +G  + + G   +M+     PN       L+
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTY-TYGYLL 59

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
            S     R   A  V   M + G   +V  +++++  +   ++   +   +  EM+  G 
Sbjct: 60  RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK-VDEAAELLNEMIDGGH 118

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PNV T   LL  L +  +++ A+D F RM  +GC P+   + ++I G      + ++  
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +  EM + G    +  Y  ++    R+ +      LFK M     +P+  T+  L++  C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA 378
           +   + +A+ +  +M  +G  P    +  ++RG+C  GK                 PH  
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGK-----------------PHE- 280

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                        A+ +L +M    +  D  S+NI I    ++  +  A +L   +  S 
Sbjct: 281 -------------AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + PD  +YS  +   C+      A  VF+ + A     D+     LV GLC+ E++TE+ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           E+F  M K  C      +N+L+Y LC  ++ D
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 134/283 (47%), Gaps = 8/283 (2%)

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           VL K   C++      +  +     V ++ +Y  L+  LCQ ++  EA  VF  M+  GC
Sbjct: 26  VLAKSGRCDH--VYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGC 83

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           S +  S++ILI GLC  +KVD+A  L +     G      TY  ++ GL K+ + K+ + 
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVD 143

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           + ++M+  GC  D   Y +LI   S++  + +    F  M++ G +P   T  SLL G +
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              +   V S    ++    V +   +N L++G  K G   +A  L   M   G  PD  
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 689 THGLLVGS--SVGEEIDSRRFAFD---SSSFPDSVS-DILAEG 725
           ++  L+    S G+  +++R   +   S   PD VS +IL +G
Sbjct: 264 SYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/392 (22%), Positives = 170/392 (43%), Gaps = 5/392 (1%)

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           L+Y  L+  L ++ R D       DM+  G  P    +  ++R LC+  +F+E+ +    
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEE 422
                 SP    ++ L+   C   K   A  +L +M D     +  ++   +  LC+  +
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +++A +L  RMV     PD   Y+  + G  K  +  +A R+F ++  +  +    +Y+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ G  +  +      +F  M + GC  +  +FN L+ G C M  + +A RL     S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 +Y  +M G+    +  +   +L +M+  G   D+ +Y ILI   S+   L    
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  + K+GL PD  +  +++  L    ++         ++++    D+++   L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +    +++  L   M+    VP    + LL+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 67/151 (44%)

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           ++ T +Y  ++  L K  R   +      ML  GC  +   Y  L++S+ +  + ++   
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  M   G  P+  +   L+ GL  G ++   +  +N+++      +   Y  L++GL 
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           K G   +A  L   M+ +G  PD   + +L+
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 253/556 (45%), Gaps = 8/556 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           LV ++V   ++         + S G  +S++  N +LG +V  K G+ D  + +Y+E+V+
Sbjct: 190 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV--KVGWVDLAWEIYQEVVR 247

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G+  NV TLN ++  L +  +IE+       M +KG  P+  T+  +I        +++
Sbjct: 248 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 307

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++  M   G++  +  Y  II  LC+  K   A  +   M  + + PD  TY  L+ 
Sbjct: 308 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 367

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C N  + DA  I ++M   G+ P    F  ++  L + G  D+++ +  D      +P
Sbjct: 368 ECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 427

Query: 376 HNA----LLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
            N     L+   C  G    A  + ++M ++  + D  ++N  +  LC+ + + +A EL 
Sbjct: 428 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 487

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    V PD  T++  + G  K  N   A+ +F  +  ++L  D ++Y+ L++G C+ 
Sbjct: 488 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 547

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +  E++  M       +  S+ ILI G C M  V +A RL       G   T  T 
Sbjct: 548 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 607

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+ G  +   A      L+ ML++G   D   Y  LI    ++  +       N M  
Sbjct: 608 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 667

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           +GL+PD  T   +L+G +   ++      + K++      D S Y  LING   +    +
Sbjct: 668 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 727

Query: 671 ASYLLDLMLGKGWVPD 686
           A  + D ML +G+VPD
Sbjct: 728 AFRVHDEMLQRGFVPD 743



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 137/622 (22%), Positives = 236/622 (37%), Gaps = 123/622 (19%)

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVD----------- 203
           +  N   FK S+  F+ ++  +V  +R   D   V   MV+   V  V+           
Sbjct: 121 ITSNCPNFKHSLQSFSAMIHILVRSRR-LPDAQAVILRMVRKSGVSRVEIVESLVLTYGN 179

Query: 204 ------TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
                   + L+    +  ++    + FR +  KG C +      ++ GL+    VD + 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            I  E+   G+Q+ +  YT  I                                 +IN L
Sbjct: 240 EIYQEVVRSGVQVNV--YTLNI---------------------------------MINAL 264

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C+N ++++    L DM   G+ P    +  ++   C  G  +E+   ++   G    P  
Sbjct: 265 CKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKP-- 322

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                           C+             ++N  I  LC+  +  +A  +L  M+   
Sbjct: 323 ----------------CVF------------TYNAIINGLCKTGKYLRAKGVLDEMLKIG 354

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + PD ATY+  ++  C+  N  DA R+F ++ +Q +V D +S+S L+  L +   + +A+
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           + F  M   G +  +  + ILI G C    + +A+++R      G      TY  I+ GL
Sbjct: 415 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K +   +   +  +M   G   D   +  LI   S+   +      F +M++  L PD 
Sbjct: 475 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 534

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING------------LWKE 665
            T  +L+ G   GS++  V+   N ++S     +   Y ILING            LW E
Sbjct: 535 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 594

Query: 666 -----------------------GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
                                  G   +A   L  ML KG VPD  T+  L+   + EE 
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654

Query: 703 DSRRFAF-----DSSSFPDSVS 719
             R FA      +S   PD ++
Sbjct: 655 MDRAFALVNKMENSGLLPDVIT 676



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EMV+ G    + T N +++          A +    M  KG  P+  T+  +I G I
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 650

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +D + +++ +M + G+  ++  Y  I+    R+ +++EA  +   M    + PD  
Sbjct: 651 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 710

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
           TY  LIN       L +A  + ++M+  G  P DD F
Sbjct: 711 TYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP-DDKF 746


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 251/556 (45%), Gaps = 8/556 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           L+ ++V   ++         + S G+ +S++  N +LG +V  K  + +  + V++E+V+
Sbjct: 54  LIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLV--KIDWVELAWEVHREVVR 111

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +GI  NV TLN ++  L +  + +        M   G   +  T+  +I        +++
Sbjct: 112 SGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEE 171

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  I+  M D G++  L  Y  II  LC++ +   A  +   M  + L PD  TY  L+ 
Sbjct: 172 AFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLV 231

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C      +A +I  +M+  G+ P    F  ++         D+++ +  D   +   P
Sbjct: 232 ESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVP 291

Query: 376 HNA----LLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
            N     L+   C  G    A  I ++M ++  + D  ++N  +  LC+ + +  A +L 
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV    +PD  T++  + G C+  N   AL +F  ++ +++  D ++Y+ L++G C+V
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKV 411

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +A E++  M       +  ++ ILI   C +  V +A RL  +    G   T  T 
Sbjct: 412 GEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTC 471

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ G  +   +      L +M+ +G A D  +Y  LI     ++ +    L+ N M K
Sbjct: 472 NTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK 531

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            GL+PD  T   +++G     ++      + K++      D S Y  LING   +   ++
Sbjct: 532 EGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNE 591

Query: 671 ASYLLDLMLGKGWVPD 686
           A    D ML +G+ PD
Sbjct: 592 AFRFHDEMLQRGFAPD 607



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/507 (22%), Positives = 213/507 (42%), Gaps = 59/507 (11%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           ++ V   + R+  A     RM ++         E ++  +  N   ++ V      FDL 
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLV------FDL- 53

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
                     +I    +  KL E    F+++R+   +        L+  L +   ++ A 
Sbjct: 54  ----------LIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG---YV-TSPHNALLECC 383
           ++  +++  G+         +V  LC+ GKFD+  +FL +  G   Y     +N L+   
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 384 CNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C  G    A  I+  MAD+ +     ++N  I  LC+     +A  +L  M+   + PD 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+  ++  C+  N+ +A  +F ++  Q +V D +S+S L+    +   + +A+  F  
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M K G    +  + +L++G C    + +A+++R                           
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRD-------------------------- 317

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
                    +ML +GC LDV AY  ++  + ++  L D    F+ MV+ G +PD  T  +
Sbjct: 318 ---------EMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 368

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+HG      +    S    +   +   D   YN LI+G  K G   +AS L D M+ + 
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428

Query: 683 WVPDATTHGLLVGS--SVGEEIDSRRF 707
             P+  T+G+L+ +  SVG   ++ R 
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRL 455



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 135/297 (45%), Gaps = 9/297 (3%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +  EM++ G V +V   N +L  L +   +  A   F  M ++G  P+  TF  +I G  
Sbjct: 315 IRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHC 374

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +  +  ++S+ G M    I+ ++  Y  +I   C+  ++E+A  L+  M +  + P+ +
Sbjct: 375 QDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI 434

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LIN  C    + +A  + + MI  G+ PT      +++G C  G   ++  FL   
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494

Query: 369 CGYVTSP----HNALLECCC---NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
                +P    +N L+       N  K FL    +EK  +  + D  ++N+ +   C   
Sbjct: 495 IAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK--EGLLPDIITYNVVMNGFCRQG 552

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            +++A  +L +M+   + PD +TY+A + G     N  +A R   ++  +    D +
Sbjct: 553 RMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ GI P + T N +++    +     A +   RM  KG  P+  ++  +I G +    
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D +   + +M   G+  ++  Y  ++   CR+ +++EA  + + M    + PD  TY  
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
           LIN       L++A    ++M+  G  P DDVF
Sbjct: 579 LINGHVTQDNLNEAFRFHDEMLQRGFAP-DDVF 610


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 274/583 (46%), Gaps = 30/583 (5%)

Query: 110 GNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G++++  G    M+     PNV     S++ +      ++ AM VL +M   G   +   
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N ++       +      F+ K+M   G+ P+V T N L++ L +  R   A   F  M
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFL-KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P   T+  +++G      + +   +L  M   GI      ++ +I    ++ K+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++A+ +F  MR   L PD +TY  +I  LC++ R++DA    E MI   L+P + V+  +
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 349 VRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  LC   K+D++    +  L+      T   N++++  C  G+   ++ + + M    +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  I   C   ++ +A +LL  MV   + PDC TY+  + G CK+   EDAL 
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +FR++ +  +  D I+Y+ +++GL Q  +   A E++  ++++G  L  S++NI+++GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLVVLAQMLVEGCAL 580
                D+A+R+      +     T T+  ++  L+K+ R   AKDL   L+     G   
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS---ANGLVP 687

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           DV  Y ++ +++ EQ  L++    F  M + G   +                  +++S +
Sbjct: 688 DVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS----------------RMLNSIV 731

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
            KL+   ++  +  Y  +I+        S AS  LDL+ G  +
Sbjct: 732 RKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 250/591 (42%), Gaps = 42/591 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF +    F  +L  +  +KR       V + M + G +PNV + 
Sbjct: 106 RLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N LL+ L + NR + AL+  + M   G  C P+  ++  VI G      +D +     EM
Sbjct: 166 NILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLE---------------------------------- 289
            D GI   +  Y+ II  LC+   ++                                  
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 290 -EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EAI   K M +  + PD +TY  L++ LC+N R  +A  + + M   GL P    +  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRKI 404
           ++G    G   E    L+        P++   ++L C     GK   A  +  KM  + +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++   I  LC++  +  A     +M+   + P    Y++ +   C    ++ A  
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  + + LD+I ++ +++  C+  ++ E+ ++F  M + G      +++ LI G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
           +  K+D+A +L +   S G      TY  ++ G  K+ R +D LV+  +M   G + D+ 
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y I++Q + +  +       +  + ++G   +  T   +LHGL   +           L
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 L++  +NI+I  L K G   +A  L   +   G VPD  T+ L+ 
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 150/637 (23%), Positives = 279/637 (43%), Gaps = 48/637 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFAD 185
           PNV    I L+    +  R   A+ +L  M   G     DV  +  V+    +E  G  D
Sbjct: 160 PNVFSYNI-LLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE--GDLD 216

Query: 186 FVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
             +  Y EM+  GI+PNV T + ++  L +   ++ A++    M K G  PN RT+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G  ++ +  +++  L +M   G++ ++  Y  ++  LC+  +  EA ++F  M    L 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF------------VD----- 347
           P+  TY  L+        L + + +L+ M+  G+ P   VF            VD     
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 348 ------------------IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
                             ++  LC+ G+ ++++ + E       SP    +N+L+   C 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             K+  AK ++ +M DR I  D   +N  I   C+   + ++ +L   MV   V PD  T
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YS  + G C     ++A ++   + +  +  D ++Y+ L+ G C++ ++ +A+ +F  M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G S    ++NI++ GL   R+   A  L      SGT    STY  I+ GL K     
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + L +   + +    L+   + I+I ++ +  +  +    F  +   GLVPD  T   + 
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
             L +   L  +      +  +    +S M N ++  L + G  ++A   L ++  K + 
Sbjct: 697 ENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756

Query: 685 PDATTHGLLVG-SSVGEEIDSRRFAFDS-SSFPDSVS 719
            +A+T  L +   S G+  +  RF  +   SF +S+S
Sbjct: 757 LEASTASLFLDLLSGGKYQEYHRFLPEKYKSFIESLS 793



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 231/551 (41%), Gaps = 81/551 (14%)

Query: 190 YKEMVKAG---IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           Y  M +AG   + PN+ T   L+       R++        + KKG   ++  F  ++KG
Sbjct: 76  YNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKG 135

Query: 247 LIANSRVDDSVSI-LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM------- 298
           L A+ R  D++ I L  M  LG    +  Y  ++  LC +N+ +EA+ L +MM       
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDC 195

Query: 299 ----------------------------RALD--LMPDELTYEELINCLCENLRLDDAND 328
                                         LD  ++P+ +TY  +I  LC+   +D A +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           +L  M+  G+ P    +  IV G C  G+  E++ FL+        P    +N+L++  C
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G+   A+ + + M  R +  +  ++   ++       + + + LL  MV + + P+  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            +S  +    K    + A+ VF ++  Q L  D+++Y  ++  LC+  ++ +A+  F  M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
                S  +  +N LI+ LC+  K DK                                A
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDK--------------------------------A 463

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           K+L++   +ML  G  LD   +  +I S  ++ ++ +    F++MV+ G+ PD  T  +L
Sbjct: 464 KELIL---EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           + G     ++   +  +  +VS     D   YN LING  K      A  L   M   G 
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 684 VPDATTHGLLV 694
            PD  T+ +++
Sbjct: 581 SPDIITYNIIL 591



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/488 (20%), Positives = 196/488 (40%), Gaps = 47/488 (9%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL--DLMPDELTY 310
            +D+  +  E+   G    +    C +  + R +      R  +M RA   ++ P+  TY
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK-- 368
             L+   C   RLD     L ++I  G       F  +++GLC   +  ++++ +  +  
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 369 ---CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENE 421
              C      +N LL+  C+  +   A  +L+ M D    DC     S+   I    +  
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDG-GDCPPDVVSYTTVINGFFKEG 213

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV----------------- 464
           ++ KAY     M+   ++P+  TYS+ +   CK    + A+ V                 
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 465 ------------------FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
                              +++ +  +  D ++Y+ L++ LC+  + TEA ++F  M+K 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G     +++  L+ G      + +   L  L   +G       ++ ++    K  +    
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           ++V ++M  +G   D   Y  +I  + +  +++D   +F  M+   L P      SL+H 
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L    +       I +++     LD+  +N +I+   KEG   ++  L DLM+  G  PD
Sbjct: 454 LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513

Query: 687 ATTHGLLV 694
             T+  L+
Sbjct: 514 IITYSTLI 521



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 138/339 (40%), Gaps = 40/339 (11%)

Query: 57  LRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           +R+ + P+H     LI        +  A+ +F  +  Q+       TY  +I  L  +G 
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR-QQGLNPDTVTYGTVIGILCKSGR 424

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           VE+     + M+ ER         SL+ S     + + A  +++ M   G  L    FN 
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 172 VLGAIVEEKR--------------GFADFVFVYK--------------------EMVKAG 197
           ++ +  +E R              G    +  Y                      MV  G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P+  T N L+    + +R+E AL  FR M   G  P+  T+ I+++GL    R   + 
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +   + + G QLELS Y  I+  LC+ N  +EA+R+F+ +   DL  +  T+  +I  L
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            +  R D+A D+   +   GL P    +  +   L E G
Sbjct: 665 LKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 275/583 (47%), Gaps = 30/583 (5%)

Query: 110 GNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G++++  G    M+ +   PNV     S++ +      ++ AM VL +M   G   +   
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNV-VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N ++       +      F+ K+M   G+ P+V T N L++ L +  R   A   F  M
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFL-KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P   T+  +++G      + +   +L  M   GI      ++ +I    ++ K+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++A+ +F  MR   L PD +TY  +I  LC++ R++DA    E MI   L+P + V+  +
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 349 VRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  LC   K+D++    +  L+      T   N++++  C  G+   ++ + + M    +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  I   C   ++ +A +LL  MV   + PDC TY+  + G CK+   EDAL 
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +FR++ +  +  D I+Y+ +++GL Q  +   A E++  ++++G  L  S++NI+++GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLVVLAQMLVEGCAL 580
                D+A+R+      +     T T+  ++  L+K+ R   AKDL   L+     G   
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS---ANGLVP 687

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           DV  Y ++ +++ EQ  L++    F  M + G   +                  +++S +
Sbjct: 688 DVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS----------------RMLNSIV 731

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
            KL+   ++  +  Y  +I+        S AS  LDL+ G  +
Sbjct: 732 RKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 251/591 (42%), Gaps = 42/591 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +PNV + 
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N LL+ L + NR + AL+  + M   G  C P+  ++  VI G      +D +     EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLE---------------------------------- 289
            D GI   +  Y+ II  LC+   ++                                  
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 290 -EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EAI   K M +  + PD +TY  L++ LC+N R  +A  + + M   GL P    +  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRKI 404
           ++G    G   E    L+        P++   ++L C     GK   A  +  KM  + +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++   I  LC++  +  A     +M+   + P    Y++ +   C    ++ A  
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  + + LD+I ++ +++  C+  ++ E+ ++F  M + G      +++ LI G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
           +  K+D+A +L +   S G      TY  ++ G  K+ R +D LV+  +M   G + D+ 
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y I++Q + +  +       +  + ++G   +  T   +LHGL   +           L
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 L++  +NI+I  L K G   +A  L   +   G VPD  T+ L+ 
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 150/637 (23%), Positives = 279/637 (43%), Gaps = 48/637 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFAD 185
           PNV    I L+    +  R   A+ +L  M   G     DV  +  V+    +E  G  D
Sbjct: 160 PNVFSYNI-LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE--GDLD 216

Query: 186 FVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
             +  Y EM+  GI+PNV T + ++  L +   ++ A++    M K G  PN RT+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G  ++ +  +++  L +M   G++ ++  Y  ++  LC+  +  EA ++F  M    L 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF------------VD----- 347
           P+  TY  L+        L + + +L+ M+  G+ P   VF            VD     
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 348 ------------------IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
                             ++  LC+ G+ ++++ + E       SP    +N+L+   C 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             K+  AK ++ +M DR I  D   +N  I   C+   + ++ +L   MV   V PD  T
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YS  + G C     ++A ++   + +  +  D ++Y+ L+ G C++ ++ +A+ +F  M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G S    ++NI++ GL   R+   A  L      SGT    STY  I+ GL K     
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + L +   + +    L+   + I+I ++ +  +  +    F  +   GLVPD  T   + 
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
             L +   L  +      +  +    +S M N ++  L + G  ++A   L ++  K + 
Sbjct: 697 ENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756

Query: 685 PDATTHGLLVG-SSVGEEIDSRRFAFDS-SSFPDSVS 719
            +A+T  L +   S G+  +  RF  +   SF +S+S
Sbjct: 757 LEASTASLFLDLLSGGKYQEYHRFLPEKYKSFIESLS 793



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 230/517 (44%), Gaps = 39/517 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     PN  T+ 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G +++   +T ++  LC + +  +A+ +  + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIVRGLCEVGKF 358
           L  +P+  +Y  L+  LC+  R  +A ++L+ M   G     DV  +  ++ G  + G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           D++                                    +M DR I  +  +++  I  L
Sbjct: 216 DKAYG-------------------------------TYHEMLDRGILPNVVTYSSIIAAL 244

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+ + + KA E+L  MV + V+P+C TY++ V G C     ++A+   +++ +  +  D 
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L++ LC+  + TEA ++F  M+K G     +++  L+ G      + +   L  L
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              +G       ++ ++    K  +    ++V ++M  +G   D   Y  +I  + +  +
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++D   +F  M+   L P      SL+H L    +       I +++     LD+  +N 
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+   KEG   ++  L DLM+  G  PD  T+  L+
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/635 (23%), Positives = 287/635 (45%), Gaps = 21/635 (3%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L   H+   L    ++  AL+ F++++    F+HT  TY  MI KLG    ++ +  +  
Sbjct: 38  LHESHVAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILH 97

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-EE 179
            M  ER P  +++ I ++ S+ N    + A+++   +   G K +V ++N +L A++ E 
Sbjct: 98  QMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGES 157

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
              F     VY+ M   G+ PNV T N LL+ L +  +++ A      M K+GC P+  +
Sbjct: 158 GNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVS 217

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  V+  +  + RV+++  +       G+   +S    +I  LCRE ++ E   L   M 
Sbjct: 218 YTTVVAAMCEDGRVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMV 274

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + P+ ++Y  +I+ L +   ++ A  +L  MI  G  P    F  +++G    G+  
Sbjct: 275 GNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVG 334

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADC------DS 409
           E V            P    +N LL   C +G    A  +  +M      DC       +
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEK----DCFCRPNVTT 390

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           ++  +    +  +++ A E+  +MV   V P+   Y++ V   CK   ++ A R+   ++
Sbjct: 391 YSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMA 450

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                   ++++  ++GLC   ++  A+ V   M + GC   + ++N L+ GL  + ++ 
Sbjct: 451 TDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELK 510

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A  L              TY  +M G     + + +L VL +MLV G   D     ++I
Sbjct: 511 EACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVI 570

Query: 590 QSMSEQNKLKDCALFFNVMVKAG--LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
            + S+  K++    F +  + AG  L PD     SLL G+ +   +      +NK+++  
Sbjct: 571 YAYSKLGKVRTAIQFLD-RITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKG 629

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
              + + +++L+ G +K+        +LD +LGKG
Sbjct: 630 IFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 7/176 (3%)

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV--VLAQMLVEGCALDVEAYC 586
           D+A+++       G   T   Y  ++  L+     K  ++  V   M  EG   +V  Y 
Sbjct: 125 DRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYN 184

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           +L++++ +  KL         M K G VPD  +  +++  + +  ++        +  ++
Sbjct: 185 VLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAE 244

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGE 700
             V   S+ N LI GL +EG   +   L+D M+G G  P+  ++  ++   S VGE
Sbjct: 245 GVV---SVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGE 297


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 253/556 (45%), Gaps = 8/556 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           LV ++V   ++         + S G  +S++  N +LG +V  K G+ D  + +Y+E+V+
Sbjct: 33  LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV--KVGWVDLAWEIYQEVVR 90

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G+  NV TLN ++  L +  +IE+       M +KG  P+  T+  +I        +++
Sbjct: 91  SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 150

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++  M   G++  +  Y  II  LC+  K   A  +   M  + + PD  TY  L+ 
Sbjct: 151 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 210

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C N  + DA  I ++M   G+ P    F  ++  L + G  D+++ +  D      +P
Sbjct: 211 ECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 270

Query: 376 HNA----LLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
            N     L+   C  G    A  + ++M ++  + D  ++N  +  LC+ + + +A EL 
Sbjct: 271 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 330

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    V PD  T++  + G  K  N   A+ +F  +  ++L  D ++Y+ L++G C+ 
Sbjct: 331 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 390

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +  E++  M       +  S+ ILI G C M  V +A RL       G   T  T 
Sbjct: 391 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 450

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+ G  +   A      L+ ML++G   D   Y  LI    ++  +       N M  
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 510

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           +GL+PD  T   +L+G +   ++      + K++      D S Y  LING   +    +
Sbjct: 511 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 570

Query: 671 ASYLLDLMLGKGWVPD 686
           A  + D ML +G+VPD
Sbjct: 571 AFRVHDEMLQRGFVPD 586



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 218/522 (41%), Gaps = 45/522 (8%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L+    +  ++    + FR +  KG C +      ++ GL+    VD +  I  E+   G
Sbjct: 33  LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 92

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +Q+ +  YT  I                                 +IN LC+N ++++  
Sbjct: 93  VQVNV--YTLNI---------------------------------MINALCKNQKIENTK 117

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECC 383
             L DM   G+ P    +  ++   C  G  +E+   ++   G    P    +NA++   
Sbjct: 118 SFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGL 177

Query: 384 CNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C  GK+  AK +L++M    ++ D  ++NI +   C N+ +  A  +   M    VVPD 
Sbjct: 178 CKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDL 237

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            ++SA +    K    + AL+ FR +    L  D++ Y+ L+ G C+   ++EA++V   
Sbjct: 238 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 297

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M + GC L   ++N ++ GLC  + + +A  L +     G      T+T ++ G  K   
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 357

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
               + +   M+      DV  Y  LI    + ++++     +N M+   + P+  +   
Sbjct: 358 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 417

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L++G  +   +       +++V           N ++ G  + G   +A   L  ML KG
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477

Query: 683 WVPDATTHGLLVGSSVGEEIDSRRFAF-----DSSSFPDSVS 719
            VPD  T+  L+   + EE   R FA      +S   PD ++
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 93/220 (42%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           + + +  LV    Q  K+ E  E F  +   G  +S ++ N L+ GL  +  VD A  + 
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                SG      T   ++  L K Q+ ++    L+ M  +G   DV  Y  LI +   Q
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             L++     + M   GL P   T  ++++GL    +       +++++      D++ Y
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           NIL+    +      A  + D M  +G VPD  +   L+G
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 245



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 70/154 (45%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EMV+ G    + T N +++          A +    M  KG  P+  T+  +I G I
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +D + +++ +M + G+  ++  Y  I+    R+ +++EA  +   M    + PD  
Sbjct: 494 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 553

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           TY  LIN       L +A  + ++M+  G  P D
Sbjct: 554 TYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 167/685 (24%), Positives = 296/685 (43%), Gaps = 68/685 (9%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P H+  VL    D   AL IF  V  +  F+HT  TY +MI KLG  G  + ME    
Sbjct: 5   LLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAME---- 60

Query: 121 NMVKERYPNVREALISLVF-SFVNHY----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
            ++ E   NV  +L+  V+ S + +Y    +V  A+ V   M+    + S+  +N ++  
Sbjct: 61  RVLMEMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNI 120

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
           +VE    F     VY  M   GI P+V T    ++    T R  +AL     M  +GC  
Sbjct: 121 LVEYGY-FNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL 179

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N+  +  VI G    +   ++  +  +M  LGI   ++ +  ++ +LC++  L+E  +L 
Sbjct: 180 NAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLL 239

Query: 296 ---------------------------------KMMRALD---------LMPDELTYEEL 313
                                            K++ A +         L PD+ TY  +
Sbjct: 240 NKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTI 299

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I    +  ++ DA+ IL+D    G  P +  +  ++ G+C+ G  D ++   E+  G   
Sbjct: 300 IYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGL 359

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYE 428
            P    +N L++     G    A  ++  M+   ++ D  ++N+ I  LC+   +  A  
Sbjct: 360 KPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANN 419

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL   +    +PD  T++  + G CK    ++A+ +   + +  +  D I+Y+ ++ GLC
Sbjct: 420 LLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLC 479

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  K  + +E F  + + GC  +  ++NILI  LC  RKV +A+ L     + G      
Sbjct: 480 KAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPV 539

Query: 549 TYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           ++  ++ G      L  A  L   + Q         V  Y I+I + SE+  +      F
Sbjct: 540 SFGTVISGFCNNGDLDEAYQLFRRMEQQY--RICHTVATYNIMINAFSEKLDMDMAQKLF 597

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE---VLDSSMYNILINGL 662
           + M   G  PD  T   ++ G     ++  V+SG + L+ + E   V   + +  +IN L
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFC---KVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDA 687
             +    +A  ++ LM+  G VP+A
Sbjct: 655 CVQHRVHEAVGIVHLMVRTGVVPEA 679



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 222/543 (40%), Gaps = 52/543 (9%)

Query: 177 VEEKRGFADFVFVYKEMV-KAGIVPNVDTL------------NYLLEVLF--------ET 215
           V+++ GF      YK M+ K G     D +            N LLE ++          
Sbjct: 30  VKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRK 89

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +++ A+D F RM    C P+  ++  ++  L+     + +  +   M   GI  ++  +
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTF 149

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T  I   CR  +   A+RL   M +     + + Y  +I+   E     +A ++   M+ 
Sbjct: 150 TIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLR 209

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFL 391
           +G+ P    F  ++  LC+ G   E    L         P+    N  ++  C  G    
Sbjct: 210 LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKG---- 265

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
              +LE  A+ K+ + +++                   L +MV   + PD  TY+  + G
Sbjct: 266 ---VLEG-ANSKVVEAENY-------------------LHKMVNKGLEPDDFTYNTIIYG 302

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K+   +DA R+ +    +  V D  +Y  L+ G+CQ   I  A+ +F      G   S
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              +N LI GL     V KA++L +     G S    TY  ++ GL K+    D   +L 
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
             + +G   D+  +  LI    ++ K+ +     + M   G+ PD  T  S+L+GL   +
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +   V      ++    + +   YNILI  L K    ++A  LL+ +  +G +PD  + G
Sbjct: 483 KPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFG 542

Query: 692 LLV 694
            ++
Sbjct: 543 TVI 545


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 150/659 (22%), Positives = 276/659 (41%), Gaps = 76/659 (11%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK--ERYPNVRE 132
           D ++AL  F+WV+ +  F+HTA ++  ++  L         + L  +MV   +   ++RE
Sbjct: 67  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMRE 126

Query: 133 A----------------------LISLVFSFVNHYR-------------VNGAMRVLVNM 157
           A                      ++ L+    N Y              V  A+ +LV M
Sbjct: 127 AVDAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMM 186

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G  L++  + +++  + +E R       V +EM   G+VP+V T N +++   ++ R
Sbjct: 187 VQDGCSLNLHTYTLLIKGLCKEGR-IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGR 245

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ AL     M + GC P+  T+ I+I GL    + D++  +L +    G    +  +T 
Sbjct: 246 MKDALGIKALMERNGCNPDDWTYNILIYGL-CGEKPDEAEELLNDAIVRGFTPTVITFTN 304

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II   C+  ++++A+R+   M + +   D   Y  LIN L +  R  +A + + +M   G
Sbjct: 305 IINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANG 364

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           L P   ++  I+ G C+VGK   ++                                ++E
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFR----------------------------LME 396

Query: 398 KMADRKIADCDSWNIP--IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
               R     ++W     I  L +++++ KA  L+ +M    + P   TY+  + G+CK 
Sbjct: 397 HEGCRP----NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK 452

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             +++A R+F  +    L  D  +Y+ L   LC   K   A E +  + + G  L+  ++
Sbjct: 453 HEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALC---KSGRAEEAYSFLVRKGVVLTKVTY 509

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             L+ G       D A  L     + G    + TY+ ++  L K ++  + L +L QM +
Sbjct: 510 TSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTL 569

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   ++ AY I+I  M ++ K       FN M+ +G  P   T    +       Q+  
Sbjct: 570 SGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEE 629

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               I ++  D    D   YN+ ING    G   +A   L  M+     P+  T+ +L+
Sbjct: 630 AEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILL 688



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 143/632 (22%), Positives = 276/632 (43%), Gaps = 29/632 (4%)

Query: 87  SIQKRFQHTADTYCKMILKLGLAG-NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
           ++ +R     D +   IL  GL G   +E E L  + +   +        +++  +    
Sbjct: 254 ALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++ A+RV  +M S   KL +  + V++  ++++ R F +      EM   G+ PNV   
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCR-FKEAKETVSEMFANGLAPNVVIY 372

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +++   +  ++ +AL+ FR M  +GC PN+ T+  +I GLI + ++  +++++ +M +
Sbjct: 373 TSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 432

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI   +  YT +I   C++++ + A RLF+MM    L PDE  Y  L + LC++ R ++
Sbjct: 433 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEE 492

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLE 381
           A   L   +  G+  T   +  +V G  + G  D +   +E    + C   +  ++ LL+
Sbjct: 493 AYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQ 549

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
             C   K   A  IL++M    +  C+  ++ I I  + +  +   A  +   M+ S   
Sbjct: 550 ALCKQKKLNEALSILDQMTLSGV-KCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 608

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P   TY+ F+   CK+   E+A  +  ++    +  D ++Y+  + G   +  +  A   
Sbjct: 609 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFST 668

Query: 500 FCCMSKNGCSLSSSSFNILIY----------------GLCVMRKVDKAIRLRSLAYSSGT 543
              M    C  +  ++ IL+                 G+    ++D   +L       G 
Sbjct: 669 LKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGL 728

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           + T  TY+ I+ G  K  R ++  V+   M  +  + + E Y +LI+   +         
Sbjct: 729 NPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVS 788

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGL 662
           F   M++ G  P  E+   L+ GL D        S    L+   +   + + + IL +GL
Sbjct: 789 FVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGL 848

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K G     S LL  M  +    D+ T+ ++ 
Sbjct: 849 LKAGHVDFCSQLLSAMENRHCQIDSETYSMVT 880


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 242/550 (44%), Gaps = 44/550 (8%)

Query: 150 AMRVLVNMNSGGFKL-SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
           A+R+  +M+       +   +N V+ ++   +   A  +     MV++G  P+  T N L
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCR-RADLARALRYLSLMVRSGWRPDAYTFNSL 194

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           +     TN+++ A D F +M  +G   +  ++  +I+GL    R+D++V + GEM     
Sbjct: 195 IVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----D 250

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           Q ++  Y  ++  LC   + EE + + + M+ L   P    Y  +++  C   +  +A +
Sbjct: 251 QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEE 310

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCC 384
           +L++M   GL P       ++   C+ G+  +++  LE      C      +NAL++  C
Sbjct: 311 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 370

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           N GK                                  + KA  LL +M    V PD  T
Sbjct: 371 NEGK----------------------------------VHKAMTLLNKMRACGVNPDAVT 396

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G+C   + E A R+ R +    L+ D  +Y+ L+  LC+  +  +A  +F  + 
Sbjct: 397 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLE 456

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G   ++ +FN LI GLC   K D A +      S+G +  T TY+  +  L K++ ++
Sbjct: 457 TRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQ 516

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + L  + +ML +        Y I+I  + ++      A  +  MV +G  PD  T  + +
Sbjct: 517 EGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSM 576

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
                  +L+   + + ++  +   +D+  YN L++G    G T  A  +L  M     V
Sbjct: 577 RAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV 636

Query: 685 PDATTHGLLV 694
           P+  T+ +L+
Sbjct: 637 PNQFTYFILL 646



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 147/649 (22%), Positives = 274/649 (42%), Gaps = 55/649 (8%)

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           TN +  A  +F  + + + F     +Y  +I  L  AG ++E   L   M +   P++  
Sbjct: 201 TNQVDVARDLFDKMPL-RGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---PDM-H 255

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
              +LV    N  R    + +L  M   G++ S   +  V+     E++   +   + +E
Sbjct: 256 MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA-KEAEEMLQE 314

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ P V T   ++    +  R+  AL     M  +GC PN  T+  +++G     +
Sbjct: 315 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 374

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V  ++++L +M   G+  +   Y  +I   C +  +E A RL ++M    L+ D+ TY  
Sbjct: 375 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 434

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN LC++ R D A  + + +   G+ P    F  ++ GLC+ GK D +  FLE      
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE------ 488

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                          K   A C           D  +++  I  LC+ +  ++    +G 
Sbjct: 489 ---------------KMVSAGC---------TPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+   V P    Y+  +    K  NY    R + ++ +     D ++Y+  +   C   +
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA  V   MSKNG ++ + ++N L+ G   + + D A+ +     S  +     TY  
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++  LV+++  +D+L     +   G    +E              L D    F+VM K  
Sbjct: 645 LLRHLVRMRLVEDVL----PLTPAGVWKAIE--------------LTDVFGLFDVMKKNE 686

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
            +P+  T  S+L G ++  +    +S ++ +  DS  L+  +Y  L+    K      A 
Sbjct: 687 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 746

Query: 673 YLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDSSSFPDSVSD 720
            L+  M+  G++P   ++  L+   + E + D  +  F +S + D   D
Sbjct: 747 VLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 795



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 4/288 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  IR LC   ++ +A   L  MV S   PD  T+++ ++G C+    + A  +F ++
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    D +SY+ L+EGLC+  +I EAVE+F  M +    +    +  L+ GLC   + 
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHM----YAALVKGLCNAERG 270

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++ + +       G   +T  Y  ++    + ++AK+   +L +M  +G A  V     +
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I +  ++ ++ D      +M   G  P+  T  +L+ G  +  ++H   + +NK+ +   
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV 390

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             D+  YN+LI G   +G    A  LL LM G G + D  T+  L+ +
Sbjct: 391 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 438


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 252/556 (45%), Gaps = 8/556 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           LV ++V   ++         + S G  +S++  N +LG +V  K G+ D  + +Y+E+V+
Sbjct: 294 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV--KVGWVDLAWEIYQEVVR 351

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G+  NV TLN ++  L +  +IE+       M +KG  P+  T+  +I        +++
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 411

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++  M   G++  +  Y  II  LC+  K   A  +   M  + + PD  TY  L+ 
Sbjct: 412 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 471

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C N  + DA  I ++M   G+ P    F  ++  L + G  D+++ +  D      +P
Sbjct: 472 ECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 531

Query: 376 HNA----LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
            N     L+   C  G    A  + ++M ++    D  ++N  +  LC+ + + +A EL 
Sbjct: 532 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELF 591

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    V PD  T++  + G  K  N   A+ +F  +  ++L  D ++Y+ L++G C+ 
Sbjct: 592 TEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 651

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +  E++  M       +  S+ ILI G C M  V +A RL       G   T  T 
Sbjct: 652 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 711

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+ G  +   A      L+ ML++G   D   Y  LI    ++  +       N M  
Sbjct: 712 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 771

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           +GL+PD  T   +L+G +   ++      + K++      D S Y  LING   +    +
Sbjct: 772 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 831

Query: 671 ASYLLDLMLGKGWVPD 686
           A  + D ML +G+VPD
Sbjct: 832 AFRVHDEMLQRGFVPD 847



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 136/622 (21%), Positives = 235/622 (37%), Gaps = 123/622 (19%)

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVD----------- 203
           +  N   FK S+  F+ ++  +V  +R   D   V   MV+   V  V+           
Sbjct: 225 ITSNCPNFKHSLQSFSAMIHILVRSRR-LPDAQAVILRMVRKSGVSRVEIVESLVLTYGN 283

Query: 204 ------TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
                   + L+    +  ++    + FR +  KG C +      ++ GL+    VD + 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            I  E+   G+Q+ +  YT  I                                 +IN L
Sbjct: 344 EIYQEVVRSGVQVNV--YTLNI---------------------------------MINAL 368

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C+N ++++    L DM   G+ P    +  ++   C  G  +E+   ++   G    P  
Sbjct: 369 CKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKP-- 426

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                           C+             ++N  I  LC+  +  +A  +L  M+   
Sbjct: 427 ----------------CVF------------TYNAIINGLCKTGKYLRAKGVLDEMLKIG 458

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + PD ATY+  ++  C+  N  DA R+F ++ +Q +V D +S+S L+  L +   + +A+
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           + F  M   G +  +  + ILI G C    + +A+++R      G      TY  I+ GL
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K +   +   +  +M   G   D   +  LI    +   +      F +M++  L PD 
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDV 638

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING------------LWKE 665
            T  +L+ G   GS++  V+   N ++S     +   Y ILING            LW E
Sbjct: 639 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698

Query: 666 -----------------------GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
                                  G   +A   L  ML KG VPD  T+  L+   + EE 
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758

Query: 703 DSRRFAF-----DSSSFPDSVS 719
             R FA      +S   PD ++
Sbjct: 759 MDRAFALVNKMENSGLLPDVIT 780



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EMV+ G    + T N +++          A +    M  KG  P+  T+  +I G I
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +D + +++ +M + G+  ++  Y  I+    R+ +++EA  +   M    + PD  
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 814

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
           TY  LIN       L +A  + ++M+  G  P DD F
Sbjct: 815 TYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP-DDKF 850


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 230/539 (42%), Gaps = 59/539 (10%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G  D  F +  E+ +AG+ P V T N L++ L ++ R+E A     RM + G  P+  
Sbjct: 23  KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 82

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TF I+I GL    R  +   +L EM  LG+      Y  +I   CR+    +A+RLF  M
Sbjct: 83  TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 142

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               + P  +TY  +   LC+   ++ A  ILEDM+ IG+T    +F  +V  L +  + 
Sbjct: 143 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 202

Query: 359 DES-VNFLEDKCGYVTSPHNALLECC--------------------CNAGKFFL-AKCIL 396
            ES V+   +       P++ L+  C                     N GK+   A  ++
Sbjct: 203 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVI 262

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           + M ++ I  D  ++NI IR  C++ ++ +A +L G M      PD  T++  +   C L
Sbjct: 263 QTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNL 322

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E+   +  Q+  + L  D +SY  +++G C+ + I +A E    +   G   +   +
Sbjct: 323 GKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIY 382

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI G      +  AI       S+G   T  TY  +M  +      ++   + +Q   
Sbjct: 383 NALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARE 442

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
               L V  Y I+IQ   +  K+ +   +F  M   G+ P++ T  +L++  +       
Sbjct: 443 NNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYS------- 495

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                                       K G + +AS L D M+G G +PD  T+G L+
Sbjct: 496 ----------------------------KSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/516 (20%), Positives = 216/516 (41%), Gaps = 35/516 (6%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  ++  +IK L    +VD    +L E++  G+Q  +  Y  ++  LC+  ++EEA RL 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M    + P  +T+  LIN L    R  +   +L++M  +G++P + ++ +++   C  
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSW 410
           G   +++   ++       P    +N + +  C  G+   A+ ILE M    +   C  +
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189

Query: 411 NIPIRWLCE-NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL------- 462
           N  + WL +    +     +   MV   + P+    +A +   CK   +++A+       
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249

Query: 463 ----------RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                     +V + +  + + LDSI+Y+ ++ G C+  K+ EA+++   M++ G     
Sbjct: 250 NKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +FN L++  C + K+++   L     + G      +Y  I+ G  K +  +     L +
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ++  G   +V  Y  LI        +         M   G+ P   T  SL++ +     
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 429

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           +    +  ++   ++  L    Y I+I G  K G   +A    + M  +G  P+  T+  
Sbjct: 430 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 489

Query: 693 LVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGN 728
           L+            +A+  S   +  S +  E +G+
Sbjct: 490 LM------------YAYSKSGNSEEASKLFDEMVGS 513



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/357 (21%), Positives = 159/357 (44%), Gaps = 22/357 (6%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPN-------- 201
           A R+L +M S G  +   +FN V+  +++  R     V +  EMV  G+ PN        
Sbjct: 170 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 229

Query: 202 ---------VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
                     + +    + L +   ++ A    + M  KG   +S T+ I+I+G   +S+
Sbjct: 230 RELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSK 289

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +++++ + G+M   G + +L  +  ++   C   K+EE   L   M+   L PD ++Y  
Sbjct: 290 MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGT 349

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +I+  C+   +  A + L +++  GL P   ++  ++ G    G    +++ +E      
Sbjct: 350 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 409

Query: 373 TSPHN----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P N    +L+   C+AG    AK I  +  +  +      + I I+  C+  ++ +A 
Sbjct: 410 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 469

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
                M    + P+  TY+  +    K  N E+A ++F ++    ++ D+I+Y  L+
Sbjct: 470 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/406 (20%), Positives = 163/406 (40%), Gaps = 24/406 (5%)

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           M  + ++  +E +Y  +I  LC+  ++D   ++L ++   GL PT   +  ++  LC+ G
Sbjct: 1   MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60

Query: 357 KFDESVNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDS-WN 411
           + +E+       ++ G   S      L+       +F     +L++M    ++  +  +N
Sbjct: 61  RVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYN 120

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I W C      +A  L   MV+  + P   TY+      CK    E A R+   + + 
Sbjct: 121 ELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 180

Query: 472 SLVLDSISYSKLVEGLCQ-VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
            + +    ++ +V  L Q   ++   V +   M   G   +       +  LC   K  +
Sbjct: 181 GMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQE 240

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+         G  + T    K M         K+   V+  ML +G  LD   Y I+I+
Sbjct: 241 AV---------GIWFKTLNKGKYM---------KEATKVIQTMLNKGIELDSITYNIMIR 282

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              + +K+++       M + G  PD  T  +LLH   +  ++      ++++ ++    
Sbjct: 283 GCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQP 342

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           D   Y  +I+G  K     +A   L  ++ +G  P+   +  L+G 
Sbjct: 343 DIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 388


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 240/524 (45%), Gaps = 48/524 (9%)

Query: 181 RG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           RG  AD + V  +M + G  P     +  LE     +    A+   R +H +GC  +   
Sbjct: 124 RGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGN 183

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFD-LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
             +V++ +     VD++V +L ++    G + ++  Y  ++  LC   +      L + M
Sbjct: 184 CNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEM 243

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
            A    P+ +T+  LI  LC N   +  +++   M   G  P   ++  I+ G+C+  + 
Sbjct: 244 VAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERL 303

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SW 410
           + +   L     Y  SP    +N LL+  C+A ++  A+ +L +M D+   DC     ++
Sbjct: 304 EVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK---DCPLDDVTF 360

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           NI + +LC+N  + +  E+L +M+    +PD  TY+  + G CK    ++A+ + R ++A
Sbjct: 361 NILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAA 420

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                +++SY+ +++GLC  E+  +A E+   M + GC  +  +FN LI  LC    V++
Sbjct: 421 CGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 480

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           AI L                                   L QMLV GC+ D+ +Y  +I 
Sbjct: 481 AIEL-----------------------------------LKQMLVNGCSPDLISYSTVID 505

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
            + +     +     NVMVK G+ P+     S+   L+   +++ V      +   +   
Sbjct: 506 GLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRS 565

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           D+ +YN +I+ L K G T +A   L  M+  G VP+ +T+ +L+
Sbjct: 566 DAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 209/437 (47%), Gaps = 7/437 (1%)

Query: 147 VNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           V+ A+R+L ++  S G +  V  +N VL  +   +R +     + +EMV AG  PN+ T 
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARR-WGHVQDLMEEMVAAGCPPNIVTF 255

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L+  L      E   +   +M + GC P+ R +  +I G+    R++ +  IL  M  
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS 315

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G+   +  Y  ++  LC  ++ EEA  L   M   D   D++T+  L++ LC+N  +D 
Sbjct: 316 YGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDR 375

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLE 381
             ++LE M+  G  P    +  ++ G C+ G  DE+V  L       C   T  +  +L+
Sbjct: 376 VIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK 435

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C+A ++  A+ ++ +M  +       ++N  I +LC+   + +A ELL +M+V+   P
Sbjct: 436 GLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 495

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  +YS  + G  K  N ++AL +   +  + +  ++I YS +   L    +I + +++F
Sbjct: 496 DLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMF 555

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +        +  +N +I  LC   + D+AI   +   SSG     STYT ++ GL   
Sbjct: 556 ENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASE 615

Query: 561 QRAKDLLVVLAQMLVEG 577
              K+   +L ++  +G
Sbjct: 616 GFVKEAQEILTELCSKG 632



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 189/445 (42%), Gaps = 47/445 (10%)

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF-------------- 345
           ++ + P+  TY  L+  LC   R+ DA  +L+DM   G  PT  ++              
Sbjct: 104 SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163

Query: 346 --VDIVRGL-------------------CEVGKFDESVNFLED-----KCGYVTSPHNAL 379
             V ++R L                   C+ G  DE+V  L D      C      +NA+
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV 223

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVV 435
           L   C A ++   + ++E+M     A C     +++  I  LC N    + +E+  +M  
Sbjct: 224 LRGLCMARRWGHVQDLMEEMV---AAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAE 280

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD   Y+  + G CK    E A  +  ++ +  L  + + Y+ L++GLC  ++  E
Sbjct: 281 HGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEE 340

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  +   M    C L   +FNIL+  LC    VD+ I +       G      TYT ++ 
Sbjct: 341 AEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVIN 400

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K     + +++L  M   GC  +  +Y I+++ +    +  D     + M++ G  P
Sbjct: 401 GFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP 460

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  +L++ L     +      + +++ +    D   Y+ +I+GL K G T +A  LL
Sbjct: 461 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520

Query: 676 DLMLGKGWVPDATTHGLLVGSSVGE 700
           ++M+ KG  P+   +  +  +  GE
Sbjct: 521 NVMVKKGMSPNTIIYSSIASALSGE 545


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 248/529 (46%), Gaps = 16/529 (3%)

Query: 192 EMVKAGIVPNVDTLNYLLEV-LFETNRIESALDQFRRMHKK--GCCPNSRTFEIVIKGLI 248
           E+   G+   V+T N++L V L        A + F  M +   G  P+ R+F  ++ G  
Sbjct: 133 ELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCC 192

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R +++ ++L  M+  G  L+ +  T ++   CR+ +      LF+ M  +   P+ +
Sbjct: 193 REGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMV 252

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---L 365
            Y   I+ LCE   +  A  +LE+M+  GL P       ++ GLC++G  + +      L
Sbjct: 253 NYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKL 312

Query: 366 EDKCGYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
                Y  + H    ++   C  GK   A+ +L +M ++ +A + +++   I   C+   
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGS 372

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
             +A+EL+ +M +   +P+  TY+A + G CK    ++A +V R  ++Q L LD ++Y+ 
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTI 432

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+   C+   IT A+++F  M++  C     ++  +I   C  R+++++ +L     S G
Sbjct: 433 LITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
              T  TYT ++ G  +L +    L V  +M+  GC  D   Y  LI S+ ++++L++  
Sbjct: 493 LVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEAR 552

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  M+   LVP   T ++L +      ++ +  S +++L    +   +   + L+  L
Sbjct: 553 ALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQAHTA---DALVRKL 609

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDS 711
              G    AS  L  +L K +  D  T+   + S      +S R+A  S
Sbjct: 610 STVGNLDAASLFLKNVLDKHYAVDHATYTSFINSC----YESNRYALAS 654



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 120/512 (23%), Positives = 210/512 (41%), Gaps = 28/512 (5%)

Query: 103 ILKLGL------AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +L++GL      A   E  +G+ +     R P+ R +  +LV       R   A  +L  
Sbjct: 149 VLRVGLRHPGCFAHAREAFDGMARAAGGVR-PDHR-SFRALVLGCCREGRFEEADALLAA 206

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M + GF L      VV+ A   + R F +   +++ M + G  PN+   +  ++ L E  
Sbjct: 207 MWAQGFCLDSATCTVVVRAFCRQGR-FRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERG 265

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQLELSFY 275
            ++ A      M  KG  PN  T   +I GL     ++ +  +  ++      +  +  Y
Sbjct: 266 YVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTY 325

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T +I   C+E KL  A  L   M    L P+  TY  LI+  C+    D A +++  M +
Sbjct: 326 TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKL 385

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNA 386
            G  P    +  I+ G C+ GK  E+   L          DK  Y       L+   C  
Sbjct: 386 EGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTI-----LITEHCKQ 440

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G    A  + ++MA++    D  ++   I   C+  ++ ++ +L  + +   +VP   TY
Sbjct: 441 GHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           ++ + G C+L     AL+VF ++     + DSI+Y  L+  LC+  ++ EA  +F  M  
Sbjct: 501 TSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLD 560

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
                   +   L Y  C   K+  A+           ++T     + +  +  L  A  
Sbjct: 561 KHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQAHTADALVRKLSTVGNLDAAS- 619

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             + L  +L +  A+D   Y   I S  E N+
Sbjct: 620 --LFLKNVLDKHYAVDHATYTSFINSCYESNR 649



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/366 (20%), Positives = 141/366 (38%), Gaps = 43/366 (11%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           +  A ++F  +     ++    TY  MI      G +   E L   MV++          
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+         + A  ++  M   GF  ++  +N ++G   ++ +   +   V +    
Sbjct: 362 TLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK-IQEAYKVLRMATS 420

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK---------- 245
            G+  +  T   L+    +   I  ALD F++M +K C P+  T+  +I           
Sbjct: 421 QGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQ 480

Query: 246 -----------GLIAN--------------SRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
                      GL+                 ++  ++ +   M   G   +   Y  +I 
Sbjct: 481 SQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALIS 540

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+E++LEEA  LF+ M    L+P ++T   L    C   ++  A   L+ +       
Sbjct: 541 SLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQAH 600

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE---DKCGYV-TSPHNALLECCCNAGKFFLAKCIL 396
           T D    +VR L  VG  D +  FL+   DK   V  + + + +  C  + ++ LA  I 
Sbjct: 601 TADA---LVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEIS 657

Query: 397 EKMADR 402
           EK++ R
Sbjct: 658 EKISKR 663


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 204/433 (47%), Gaps = 5/433 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  MV +  +P++     LL V+ +  R +  +  F +M   G  P   T  IV+  + 
Sbjct: 69  LFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVC 128

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +S+   +   LG+M  LG + +L  +T ++   C  N++E+A+ LF  +  +   P+ +
Sbjct: 129 RSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVV 188

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI+CLC+N  L+ A +I   M   G+ P    +  +V GLCE+G++ ++   L D 
Sbjct: 189 TYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM 248

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                 P+     AL++     GK   AK + + M    +  D  ++   I  LC    +
Sbjct: 249 MKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRL 308

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A ++   M  +   P+  TY+  + G CK    ED  ++F ++S + LV ++I+Y+ L
Sbjct: 309 DEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL 368

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G C V +   A EVF  M          ++N+L+ GLC    V+KA+ +         
Sbjct: 369 IQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM 428

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TYT I+ G+ K+ + +D   +   +  +G   +V  Y  +I     +  + +   
Sbjct: 429 DINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488

Query: 604 FFNVMVKAGLVPD 616
            F  M + G +P+
Sbjct: 489 LFKKMKEDGFLPN 501



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/419 (21%), Positives = 178/419 (42%), Gaps = 5/419 (1%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +T ++ ++ +  + +  I LF+ M+ L + P   T   ++NC+C + +   A+  L  M+
Sbjct: 85  FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            +G  P    F  ++ G C   + ++++   +   G    P    +  L+ C C      
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLN 204

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  I  +M D  I  +  ++N  +  LCE      A  LL  M+   + P+  T++A +
Sbjct: 205 HAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALI 264

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
               K+    +A  +++ +   S+  D  +Y+ L+ GLC   ++ EA ++F  M  NG  
Sbjct: 265 DAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYY 324

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            +  ++  LI+G C  ++V+   ++       G    T TYT ++ G   + R      V
Sbjct: 325 PNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEV 384

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             QM       D+  Y +L+  +     ++   + F  M K  +  +  T   ++ G+  
Sbjct: 385 FNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCK 444

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
             ++         L S     +   Y  +I+G  + G   +A  L   M   G++P+ +
Sbjct: 445 VGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNES 503



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 164/389 (42%), Gaps = 38/389 (9%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y +++     NL+ ++A D+   M+     P+   F  ++  + ++ +FD  ++  E   
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
               SP   L  C                            NI +  +C + +  +A   
Sbjct: 110 ILGISP--VLYTC----------------------------NIVMNCVCRSSQPCRASCF 139

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           LG+M+     PD  T+++ + G C     EDAL +F Q+       + ++Y+ L+  LC+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC-VMRKVDKAIRLRSLAYSSGTSYTTS 548
              +  AVE+F  M  NG   +  ++N L+ GLC + R  D A  LR +    G      
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMM-KRGIQPNVI 258

Query: 549 TYTKIMLGLVKLQR---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T+T ++   VK+ +   AK+L  V+ QM V     DV  Y  LI  +    +L +    F
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYP---DVFTYTALINGLCTYGRLDEARQMF 315

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
            +M   G  P+  T  +L+HG     ++   +    ++     V ++  Y +LI G    
Sbjct: 316 YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLV 375

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G    A  + + M  +   PD  T+ +L+
Sbjct: 376 GRPDVAQEVFNQMGSRRAPPDIRTYNVLL 404



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 121/258 (46%), Gaps = 3/258 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYR 146
           +++  Q    T+  +I      G + E + L + M++   YP+V     +L+     + R
Sbjct: 249 MKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDV-FTYTALINGLCTYGR 307

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++ A ++   M S G+  +   +  ++    + KR   D   ++ EM + G+V N  T  
Sbjct: 308 LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKR-VEDGTKIFYEMSQKGLVANTITYT 366

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++      R + A + F +M  +   P+ RT+ +++ GL  N  V+ ++ I   M   
Sbjct: 367 VLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR 426

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            + + +  YT II  +C+  K+E+A  LF  + +  + P+ +TY  +I+  C    + +A
Sbjct: 427 EMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEA 486

Query: 327 NDILEDMIVIGLTPTDDV 344
           + + + M   G  P + V
Sbjct: 487 DALFKKMKEDGFLPNESV 504



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 5/243 (2%)

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y K++       +  EA+++F  M  +    S   F  L+  +  M++ D  I L    
Sbjct: 49  NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G S    T   +M  + +  +       L +M+  G   D+  +  L+      N++
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRI 168

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           +D    F+ +V  G  P+  T  +L+H L     L+      N++  +    +   YN L
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSL 228

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSR---RFAFDSSS 713
           ++GL + G  S A++LL  M+ +G  P+  T   L+ +   VG+ ++++   +     S 
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSV 288

Query: 714 FPD 716
           +PD
Sbjct: 289 YPD 291


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 238/527 (45%), Gaps = 42/527 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L AIV+ +      + + K+M  AG+ P+  TL+ L+   F+  R++       ++
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G      TF  +I GL    +   +V +  +M   G Q ++  YT II  LC+  + 
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A  LF+ M      PD +TY  +I+ LC++ R+++A DI   M   G++P    +  +
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI 404
           ++GLC   ++ E+   L +       P+    + L+   C  G  F A+ +L+ M +  +
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  +++  +       E+ +A +L   M+     PD  +Y+  + G CK     +A +
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  Q L  D +SY+ L++GLCQ+ ++ EA ++F  M  NG      +++IL+ G C
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483

Query: 524 VMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               + KA RL R++          STY K                            ++
Sbjct: 484 KQGYLAKAFRLFRAM---------QSTYLKP---------------------------NM 507

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y ILI +M +   LK+    F+ +   GL P+ +   ++++GL     L         
Sbjct: 508 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 567

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           +  D    +   YN++I G  +    S+A  L+  M  KG+V D  T
Sbjct: 568 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/494 (23%), Positives = 206/494 (41%), Gaps = 41/494 (8%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA-IRLFKMMRALDLMPDELTYE 311
           +DD+++    M     +  +  +  ++  + +     +A I L K M    L PD  T  
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC-- 369
            LINC  +  R+D    +L  +I +GL  T   F  ++ GLC+VGKF ++V   +D    
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 370 GYVTSPHN--ALLECCCNAGKFFLAKCILEKMA--------------------DRKI--- 404
           GY    H    ++   C  G+   A  +  KM                     DR++   
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 405 -------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                         +  ++N  I+ LC     R+A  +L  M+  +++P+  T+S  +  
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK  N  +A  V + ++   +  + ++YS L+ G     ++ EA ++F  M   GC   
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             S+NILI G C  +++ +A +L +     G +    +Y  ++ GL +L R ++   +  
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            ML  G   D+  Y IL+    +Q  L      F  M    L P+      L+  +    
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            L       ++L       +  +Y  +INGL KEGL  +A      M   G  P+  ++ 
Sbjct: 522 NLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYN 581

Query: 692 LLVGSSVGEEIDSR 705
           +++   +  + +SR
Sbjct: 582 VIIRGFLQHKDESR 595



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 2/259 (0%)

Query: 454 KLCNYEDA-LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           K+ +Y DA + + +Q+    L  D+ +   L+    Q++++     V   + K G  L+ 
Sbjct: 133 KMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTI 192

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +FN LI GLC + K  +A+ L     + G      TYT I+ GL K+        +  +
Sbjct: 193 VTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   GC  DV  Y  +I S+ +  ++ +    F+ M   G+ P+  T  SL+ GL + S+
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-G 691
               S+ +N+++S + + +   +++LIN   KEG   +A  +L  M   G  P+  T+  
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372

Query: 692 LLVGSSVGEEIDSRRFAFD 710
           L+ G S+  E+   R  FD
Sbjct: 373 LMNGYSLQAEVVEARKLFD 391


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 243/513 (47%), Gaps = 11/513 (2%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+++  +P + + N LL  L + N        +  M   G  P+  T  I+   L   +R
Sbjct: 82  MMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V ++++ +  +   G    +  YT +I  LC E+++ EA RLF  M+ L   P+ +TY  
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 313 LINCLCE----NLRLDDANDILEDMIVIGLT--PTDDVFVDIVRGLCEVGKFDESVNFLE 366
           LI  LC+    N+ L    ++L D    G+   P    +  I+ GLC+VG+ DE+    E
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           +       P    ++ L+   C AGK+  +K + ++M D+ +  D  ++++ I  LC+  
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ +A +LL  M+   +VP+  TY++ + G C + +   A  +F  + ++ L  D ISY+
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ G C+  K+ EA+ ++  M + G S + +++  L+ GL    KV  A +L  +  + 
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S  +  Y   + GL K     + + +  ++      L++E Y  LI  + +  KL+  
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETA 501

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F  + + GL PD  T   ++HG     Q+   +    K+  +    D   YN L+ G
Sbjct: 502 WELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCG 561

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +     +   LL  M+ K   P+A +  ++V
Sbjct: 562 FCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 238/512 (46%), Gaps = 12/512 (2%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            +  FN +LG + +    ++    +Y EM  AG+ P++ TL+ L   L   NR+  AL  
Sbjct: 90  PISSFNRLLGGLAKINH-YSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              + ++G  PN  T+  +IKGL    R+ ++  +   M  LG       Y  +I  LC+
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 285 ENKLEEAIRLFKMM------RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
              +  A++L K M        ++  P  +TY  +I+ LC+  R D+A ++ E+M   G+
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
            P    +  ++ G C  GK+D+S +  ++       P     + L++  C  GK   AK 
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +LE M  R I  +  ++N  I   C   ++  A EL   M    + PD  +Y+  + G C
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    ++A+ ++ ++       +  +Y  L++GL Q  K+ +A ++F  M   G S +S 
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQ 448

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            + I + GLC    + +A+ L +   S         Y+ ++ GL K  + +    +  ++
Sbjct: 449 IYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKL 508

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             EG   DV  Y I+I    +  ++ +  + F  M + G  PD     +LL G  +G++L
Sbjct: 509 SQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKL 568

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             V   ++K+V      +++   I+++ L K+
Sbjct: 569 EEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 218/461 (47%), Gaps = 15/461 (3%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+      +R++ A R+ + M   G   +   +  ++  + +   G  +  
Sbjct: 159 PNVV-TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ--TGNVNIA 215

Query: 188 F-VYKEMV----KAGI--VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
             ++KEM+    + G+   P V T + +++ L +  R + A + F  M  +G  P+  ++
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I G     + D S  +  EM D G+Q ++  ++ +I  LC+E K+ EA +L ++M  
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ 335

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             ++P+ +TY  LI+  C    L+ A ++   M   GL P +  +  ++ G C+  K  E
Sbjct: 336 RGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKE 395

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
           ++N   +      SP    +  LL+     GK   AK +   M    + A+   + I + 
Sbjct: 396 AMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLD 455

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC+N+ + +A EL   +   +   +   YS  + G CK    E A  +F ++S + L  
Sbjct: 456 GLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP 515

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++Y+ ++ G C+V ++  A  +F  M +NGC+    ++N L+ G C   K+++ I+L 
Sbjct: 516 DVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLL 575

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
                   S   ++ T ++  L K ++ K  + +L +  V+
Sbjct: 576 HKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQ 616



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 208/453 (45%), Gaps = 46/453 (10%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           +++ G +PNV T   L++ L   +RI  A   F RM K GC PN+ T+  +IKGL     
Sbjct: 152 ILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGN 211

Query: 253 VDDSVSILGEMFDLGIQLELS------FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           V+ ++ +  EM +   Q  ++       Y+ II  LC+  + +EA  LF+ M+A  ++PD
Sbjct: 212 VNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPD 271

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            ++Y  LI+  C   + D +  + ++M+  G+ P    F  ++  LC+ GK  E+   LE
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIAD------------CDSW 410
                   P    +N+L++  C  G    A+ +   M  + +              C +W
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTW 391

Query: 411 NIP------------------------IRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
            +                         ++ L +  ++  A +L G M    V  +   Y 
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYG 451

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
            F+ G CK     +A+ +F ++ + +  L+  +YS L++GLC+  K+  A E+F  +S+ 
Sbjct: 452 IFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G      ++NI+I+G C + +VD A  L      +G +     Y  ++ G  +  + +++
Sbjct: 512 GLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEV 571

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + +L +M+ +  + +  +  I++  + +  K K
Sbjct: 572 IKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYK 604



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/510 (23%), Positives = 219/510 (42%), Gaps = 35/510 (6%)

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A   F  M +    P   +F  ++ GL   +      S+  EM   G+  +L   + + 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC  N++ EA+     +     +P+ +TY  LI  LC   R+ +A  +   M  +G T
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           P    +  +++GLC+ G  + ++      L D   Y  +         C  G        
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN---------CKPGVI------ 238

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                        +++I I  LC+     +A EL   M    ++PD  +YS  + G C  
Sbjct: 239 -------------TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCA 285

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             ++ +  +F ++  Q +  D +++S L++ LC+  K+TEA ++   M + G   +  ++
Sbjct: 286 GKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITY 345

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI G C++  ++ A  L     S G      +YT ++ G  K  + K+ + +  +ML 
Sbjct: 346 NSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ 405

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G + +V  Y  L++ + ++ K+ D    F VM   G+  + +     L GL     L  
Sbjct: 406 VGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFE 465

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
                N+L S +  L+   Y+ LI+GL K G    A  L + +  +G  PD  T+ +++ 
Sbjct: 466 AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIH 525

Query: 696 S--SVGEEIDSRRFAFDSSSFPDSVSDILA 723
               VG ++D+    F+         DI+A
Sbjct: 526 GFCKVG-QVDNANILFEKMEENGCTPDIIA 554



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 10/283 (3%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLV 155
           DT CK        G V E + L + M++    PN+     SL+  F     +N A  + +
Sbjct: 315 DTLCK-------EGKVTEAKKLLEVMIQRGIVPNLI-TYNSLIDGFCMVGDLNSARELFL 366

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           +M S G +     +  ++    +  +   + + +Y EM++ G  PNV T   LL+ LF+ 
Sbjct: 367 SMPSKGLEPDEISYTTLINGYCKTWK-VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQK 425

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            ++  A   F  M   G   NS+ + I + GL  N  + +++ +  E+     +L +  Y
Sbjct: 426 GKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENY 485

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           +C+I  LC+  KLE A  LF+ +    L PD +TY  +I+  C+  ++D+AN + E M  
Sbjct: 486 SCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEE 545

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA 378
            G TP    +  ++ G CE  K +E +  L        SP+ A
Sbjct: 546 NGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 144/626 (23%), Positives = 282/626 (45%), Gaps = 17/626 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +++ L + +D++ AL+ FK ++  K F+HT  TY  MI KL     ++ ++ L Q M  E
Sbjct: 46  VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE 105

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                 +  IS++ S+        A++    M     K +V ++N +L A+++E R F  
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENR-FQM 164

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
              +Y  M K G+ PNV T N LL+ L + NR++ A      M  KGC P+  ++  +I 
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L    +V ++  +      +     +  Y  +I  +C+E   EEA +L   M    + P
Sbjct: 225 SLCKLGKVKEARELA-----MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDP 279

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + ++Y  +IN L +   ++ +  +L  M   G +P    F  +++G    G   E+++F 
Sbjct: 280 NVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFW 339

Query: 366 ED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADC----DSWNIPIRWL 417
           +   + G V +   +NAL+   C+      A  +  +M   +I  C     +++  I   
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM---EINGCCPNVRTYSALIDGY 396

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  ++  A E+   M+     P+   Y+  V   C+   +  A  +   +  ++   ++
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++++  ++GLC   ++  A++VF  M  +GC  +++++N L+  L   R+  +A  L   
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G      TY  I+ G        + L +L +M+V G   D     I+I +  +Q K
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           +       + +      PD     SL+ G+     +      + +++S+    + + +N+
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNV 636

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGW 683
           L+  L+     S A   LD +LG G+
Sbjct: 637 LVRHLFSNMGHSGAVQFLDAVLGSGF 662



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 106/492 (21%), Positives = 207/492 (42%), Gaps = 2/492 (0%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T   ++E L     ++      ++M  +G   +   F  VI         + ++     M
Sbjct: 78  TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            D  ++  +  Y  I+  L  EN+ +    ++  M+   + P+  TY  L+  LC+N R+
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
           D A+ +L +M   G  P +  +  ++  LC++GK  E+          V   +NAL+   
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPV-YNALINGV 256

Query: 384 CNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C    F  A  +L++M ++ I  +  S+   I  L +   +  +  +L +M      P+ 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            T+++ + G        +AL  + ++  + +V + ++Y+ L+ GLC    + +AV VF  
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M  NGC  +  +++ LI G      +D A  + +   + G       YT ++  L +   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
                 ++  M VE C  +   +   I+ +    ++      F+ M  +G  P+  T   
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           LL  L    +       +  +      L+   YN +I G    G+  +A  LL  M+ +G
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556

Query: 683 WVPDATTHGLLV 694
             PDA T  +++
Sbjct: 557 TKPDAITVNIVI 568



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 13/334 (3%)

Query: 44  SHQTTDYEAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADT 98
           SH+  D+  ++  +R  + P+      L+  L +   L  A+ +F  + I     +   T
Sbjct: 332 SHEALDFWDRM--IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR-T 388

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  +I     AG+++    +   M+    +PNV  A   +V     +   N A  ++ NM
Sbjct: 389 YSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV-AYTCMVDVLCRNSMFNQAYCLIENM 447

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETN 216
                  +   FN  +  +    R   D+   V+ +M  +G  PN  T N LL+ L +  
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGR--VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R   A    + M  +G   N  T+  +I G      + +++ +LG+M   G + +     
Sbjct: 506 RFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVN 565

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C++ K+  AI+L   + A    PD + Y  LI+ +C ++ +++A   L  M+  
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
           G++P    +  +VR L        +V FL+   G
Sbjct: 626 GISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLG 659



 Score = 45.8 bits (107), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 6/237 (2%)

Query: 461 ALRVFRQVS-AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           AL  F+ ++ ++S     ++Y  ++E L    ++     +   M   G S S   F  +I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
                    ++A++            T   Y  I+  L+   R + +  + + M  +G  
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +V  Y IL++++ + N++         M   G  PD  +  +L+  L    +L  V   
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC---KLGKVKEA 235

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             + ++ S      +YN LING+ KE    +A  LLD M+ KG  P+  ++  ++ +
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 5/187 (2%)

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
            +S+A S    +T  TY  ++  L   +    +  +L QM +EG +   + +  +I S  
Sbjct: 63  FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYR 122

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
                +     F  M    + P  +    +L  L D ++  +++   + +  D    +  
Sbjct: 123 RAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVF 182

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDS 711
            YNIL+  L K      A  LL  M  KG  PD  ++  L+ S   +G+  ++R  A   
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM-- 240

Query: 712 SSFPDSV 718
            SF  SV
Sbjct: 241 -SFTPSV 246


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 274/578 (47%), Gaps = 29/578 (5%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           SV  FN ++GA+V  +R   D V  +Y++M +  I  ++ +   L++     +++  AL 
Sbjct: 80  SVIDFNKLMGAVVRMER--PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 137

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F ++ K G  P+  TF  ++ GL  + RV +++ +  ++     + ++  +T ++  LC
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLC 193

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG-LTPTD 342
           RE ++ EA+ L   M    L PD++TY   ++ +C+      A ++L  M  I  + P  
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 343 DVFVDIVRGLCEVGKFDESVNF---LEDKCGYVT-SPHNALLECCCNAGKFFLAKCILEK 398
            ++  I+ GLC+ G+  +S N    ++DK  +     +N ++   C +G++  A+ +L++
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 399 MADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M +RKI+ +  ++N  I    +  +  +A EL   M+   ++P+  TY++ + G CK   
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A  +F  ++ +    D  +++ L++G C  ++I + +E+   M + G   ++ ++N 
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML--- 574
           LI+G C++  ++ A+ L     SSG      T   ++ GL    + KD L +   M    
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 575 --------VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                     G   DV  Y ILI  +  + K  +    +  M   G+VPD  T  S++ G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L   S+L   +     + S S   +   +N LING  K G       L   M  +G V D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 687 AT-----THGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           A       +G     ++   +D  +    S  +PD+++
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 651



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/533 (22%), Positives = 253/533 (47%), Gaps = 21/533 (3%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           E +G  D + ++ +M+++  +P+V   N L+  +    R +  +  +++M +K    +  
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           +F I+IK   + S++  ++S  G++  LG+  ++  +T ++  LC ++++ EA+ LF  +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD LT+  L+N LC   R+ +A  +L+ M+  GL P    +   V G+C++G  
Sbjct: 178 ----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 359 DESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
             ++N L   ++  ++      ++A+++  C  G+   +  +  +M D+ I  +  ++N 
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I   C +     A  LL  M+   + P+  TY+A +    K   + +A  ++ ++  + 
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           ++ ++I+Y+ +++G C+ +++  A ++F  M+  GCS    +F  LI G C  +++D  +
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L       G    T TY  ++ G   +      L +  QM+  G   D+     L+  +
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 593 SEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
            +  KLKD    F  M K+           G+ PD  T   L+ GL +  +         
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++     V D+  Y+ +I+GL K+    +A+ +   M  K + P+  T   L+
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/542 (22%), Positives = 233/542 (42%), Gaps = 57/542 (10%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G+ P+V T   LL  L   +R+  ALD F ++    C P+  TF  ++ GL 
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLC 193

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              RV ++V++L  M + G+Q +   Y   +  +C+      A+ L + M  +  + P+ 
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ LC++ R  D++++  +M   G+ P    +  ++ G C  G++  +   L++
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 SP    +NAL+      GKFF A  + ++M  R I  +  ++N  I   C+ + 
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A ++   M      PD  T++  + G C     +D + +  ++  + LV ++++Y+ 
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 483 LVEGLCQVE-----------------------------------KITEAVEVFCCMSKNG 507
           L+ G C V                                    K+ +A+E+F  M K+ 
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 508 CSLSSS-----------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             L +S           ++NILI GL    K  +A  L       G    T TY+ ++ G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW-KEGLTSQASYLL 675
               ++L++G      ++       +++S     D+     ++ G W KE L    + L 
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 676 DL 677
           DL
Sbjct: 674 DL 675



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 211/487 (43%), Gaps = 24/487 (4%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            F  ++  +  E R   + V +   MV+ G+ P+  T    ++ + +     SAL+  R+
Sbjct: 184 TFTTLMNGLCREGR-VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242

Query: 228 M----HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
           M    H K   PN   +  +I GL  + R  DS ++  EM D GI   +  Y C+I   C
Sbjct: 243 MEEISHIK---PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
              +   A RL + M    + P+ +TY  LIN   +  +  +A ++ ++M+  G+ P   
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
            +  ++ G C+  + D + +          SP       L++  C A +      +L +M
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 400 ADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             R  +A+  ++N  I   C   ++  A +L  +M+ S V PD  T +  + G C     
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 459 EDALRVFRQVSAQSLVLDS-----------ISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           +DAL +F+ +    + LD+           ++Y+ L+ GL    K  EA E++  M   G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
               + +++ +I GLC   ++D+A ++     S   S    T+  ++ G  K  R  D L
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M   G   D   Y  LI    +   +      F  M+ +G+ PD  T+ ++L G 
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659

Query: 628 ADGSQLH 634
               +L 
Sbjct: 660 WSKEELE 666



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 198/433 (45%), Gaps = 20/433 (4%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K +V +++ ++  + ++ R  +D   ++ EM   GI PN+ T N ++     + R  +A 
Sbjct: 250 KPNVVIYSAIIDGLCKDGR-HSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              + M ++   PN  T+  +I   +   +  ++  +  EM   GI      Y  +I   
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++++L+ A  +F +M      PD  T+  LI+  C   R+DD  ++L +M   GL    
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEK 398
             +  ++ G C VG  + +++  +        P     N LL+  C+ GK   A  + + 
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 399 MADRKI------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           M   K+             D  ++NI I  L    +  +A EL   M    +VPD  TYS
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G CK    ++A ++F  + ++S   + ++++ L+ G C+  ++ + +E+FC M + 
Sbjct: 549 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL---VKLQRA 563
           G    +  +  LIYG   +  ++ A+ +     SSG    T T   ++ G     +L+RA
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 564 KDLLVVLAQMLVE 576
             +L  L +  +E
Sbjct: 669 VAMLEDLQRYQLE 681



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 189/409 (46%), Gaps = 23/409 (5%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           +PN+      ++  F    R + A R+L  M       +V  +N ++ A V+E + F + 
Sbjct: 285 FPNIV-TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK-FFEA 342

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             +Y EM+  GI+PN  T N +++   + +R+++A D F  M  KGC P+  TF  +I G
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                R+DD + +L EM   G+      Y  +I   C    L  A+ L + M +  + PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +T   L++ LC+N +L DA ++ + M                    +  K D   +   
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAM--------------------QKSKMDLDASHPF 502

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           +        +N L+    N GKF  A+ + E+M  R I  D  +++  I  LC+   + +
Sbjct: 503 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A ++   M   S  P+  T++  + G CK    +D L +F ++  + +V D+I Y  L+ 
Sbjct: 563 ATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY 622

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           G  +V  I  A+++F  M  +G    + +   ++ G     ++++A+ +
Sbjct: 623 GFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  ++   EDA+ +F  +     +   I ++KL+  + ++E+    + ++  M +     
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              SF ILI   C   K+  A+         G      T+T ++ GL    R  + L + 
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            Q+    C  DV  +  L+  +  + ++ +     + MV+ GL PD+ T  + + G+   
Sbjct: 175 HQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC-- 228

Query: 631 SQLHLVSSGINKLVSDSEV----LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            ++    S +N L    E+     +  +Y+ +I+GL K+G  S +  L   M  KG  P+
Sbjct: 229 -KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 687 ATTHGLLVGS 696
             T+  ++G 
Sbjct: 288 IVTYNCMIGG 297


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 245/513 (47%), Gaps = 11/513 (2%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+++   P++ + N+LL  L +          + +M   G   +  T  I++  L   +R
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + +  +    +   G    +  Y  +I  LC E+++ EA RLF  M+ L   PD +TY  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 313 LINCLCE----NLRLDDANDILEDM--IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           LI  LC     N+ L    ++L D+    I   P    +  IV GLC+VG+ DE+    E
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 367 D--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           +    G + S   +N+L+   C AGK+  +K +L++M D+ +  D  ++N+ I  LC+  
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ +A +LLG M+ S +VPD  TY++ + G C + +   A  +F  + ++    D ISY+
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 359

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ G  +  K+ EA++++  M   G   +  +++ L+ G+ +  KVD A +L S+  + 
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G +  + TY   + GL K     + + +  ++      L++E    LI  + +  KL+  
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 479

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F  +   G  P+  T   ++HG     Q+   +  I K+ ++    D   YN L+ G
Sbjct: 480 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 539

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     +   LL  M  K   PDA T  ++V
Sbjct: 540 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 239/522 (45%), Gaps = 12/522 (2%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L  + + K  ++    +Y +M  +G+  +  TLN LL  L   NR+      
Sbjct: 68  SLSSFNHLLSGLAKIKH-YSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F  + ++G  PN  T+  +IKGL    R+ ++  +   M  LG   ++  Y  +I  LC 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 285 ENKLEEAIRLFKMM------RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
              +  A++L + M        ++  P+ +TY  +++ LC+  R D+A  + E+M   G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
            P+   +  ++ G C  GK++ES   L++       P     N L++  C  GK   AK 
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +L  M +  I  D  ++N  I   C   ++  A EL   M      PD  +Y+  + G  
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    E+A++++ ++       + I+Y  L++G+    K+ +A ++F  M  +G + +S 
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++ I + GLC    + +A++L +   SS           ++ GL K  + +    +  ++
Sbjct: 427 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 486

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             EG   +V  Y I+I     + ++    +    M   G  PD  T  +L+ G  + ++L
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
             V   ++++       D+   +I+++ L K+    +  +LL
Sbjct: 547 EEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 219/489 (44%), Gaps = 27/489 (5%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEM-EGLCQ-- 120
           +HL+  L      S    ++     Q R    +   C + + L    NV  + EG     
Sbjct: 73  NHLLSGLAKIKHYSQVFSLYN----QMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFA 128

Query: 121 NMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
            +++  Y PN+     +L+      +R++ A R+ + M   G    V    V  G +++ 
Sbjct: 129 GILRRGYSPNIV-TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDV----VTYGTLIKG 183

Query: 180 KRGFADF---VFVYKEMV------KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
             G  +    + +++EM+      +    PNV T N +++ L +  R + A   F  M  
Sbjct: 184 LCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKT 243

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           +G  P+  ++  +I G     + ++S  +L EM D G+Q ++  +  +I  LC+E K+ E
Sbjct: 244 QGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 303

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A +L  +M    ++PD +TY  LI   C    L+ A ++   M   G  P    +  ++ 
Sbjct: 304 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 363

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           G  +  K +E++    +       P    +++LL+    AGK   AK +   M    IA+
Sbjct: 364 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 423

Query: 407 CD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
              ++ I +  LC+N+ + +A +L   +  S+   +    +  + G CK    E A  +F
Sbjct: 424 NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELF 483

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++S +    + ++Y+ ++ G C+  ++ +A  +   M  NGC+    ++N L+ G    
Sbjct: 484 EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 543

Query: 526 RKVDKAIRL 534
            K+++ ++L
Sbjct: 544 NKLEEVVQL 552



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F     +N A  + V+M S G +  V  +NV++    +  +   + + +Y EM+ 
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK-VEEAMKLYNEMLL 383

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PNV T + LL+ +F   +++ A   F  M   G   NS T+ I + GL  N  + +
Sbjct: 384 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE 443

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +  E+     +LE+    C+I  LC+  KLE A  LF+ +      P+ +TY  +I+
Sbjct: 444 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 503

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C   ++D AN +++ M   G TP    +  ++RG  E  K +E V  L        SP
Sbjct: 504 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 232/527 (44%), Gaps = 42/527 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L AIV  ++ +   + + K+M  AG+ PN  TLN L+        ++       ++
Sbjct: 93  FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P   TF  +I GL        ++ +  +M   G Q ++  YT II  LC+  + 
Sbjct: 153 IKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGET 212

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A  L K M  +   PD +TY  LI+ LC++  +++A DI   M   G++PT   +  +
Sbjct: 213 AAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSL 272

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           ++GLC   ++ E+   L +       P     + L++  C  G    A+ +L+ M +  +
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  ++N  +       E+ +A +L   M+     PD  +YS  + G C +   ++A +
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  Q L  +++SY+ L+   CQ+ K+ EA E+F  M  NG      ++++L+ G C
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452

Query: 524 VMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               + KA RL R++           TY K  L +                         
Sbjct: 453 KQGYLGKAFRLFRAMQ---------GTYLKPNLVM------------------------- 478

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y ILI SM +   L      F+ +   GL PD +   ++++GL     L        K
Sbjct: 479 --YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRK 536

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           +  D    +   YN++I G  +    S+A  L+  M  KG+V D  T
Sbjct: 537 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 198/457 (43%), Gaps = 40/457 (8%)

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +  I L K M    L P+  T   LINC C    +D    +L  +I +GL PT   F  +
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + GLC+ G+F +++   +D       P    +  ++   C  G+   A  +++KM +   
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  I  LC++  + +A ++   M    + P   +Y++ + G C    +++A  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQ------------------VE-------------- 491
           +  ++++ +++ D +++S L++  C+                  VE              
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 492 ---KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              ++ EA ++F  M   GC     S++ILI G C+++++D+A +L +     G +  T 
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +YT ++    +L + ++   +   M   G   D+  Y +L++   +Q  L      F  M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
               L P+      L+  +     L+      ++L       D  +Y  +INGL KEGL 
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
            +A      M   G  P+  ++ +++   +  + +SR
Sbjct: 528 DEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESR 564



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 141/353 (39%), Gaps = 83/353 (23%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLV 155
           D +CK        GNV E +G+ + M +    PNV     SL+  +     V  A ++  
Sbjct: 309 DIFCK-------EGNVLEAQGVLKTMTEMGVEPNVI-TYNSLMHGYSLQMEVVEARKLFD 360

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M + G K  V  +++++      KR   +   ++ EM+  G+ PN  +   L+    + 
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKR-IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            ++  A + F+ MH  G  P+  T+ ++++G                             
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEG----------------------------- 450

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
                  C++  L +A RLF+ M+   L P+ + Y  LI+ +C++  L+ A  +  ++ V
Sbjct: 451 ------FCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFV 504

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            GL P   ++  I+ GLC+ G  DE++       ED C     P N              
Sbjct: 505 HGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGC-----PPNEF------------ 547

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                            S+N+ IR   ++++  +A +L+G M     V D  T
Sbjct: 548 -----------------SYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 254/537 (47%), Gaps = 27/537 (5%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++  MV++  +P+V     L+ V+    R +  +   ++M       N+
Sbjct: 57  HEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNA 116

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I++K   + S++  ++S  G++  LG    +  +  ++  LC E+++ EA+ LF  
Sbjct: 117 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQ 176

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      P+ +T+  L+N LC   R+ +A  +L+ M+  GL P    +  IV G+C++G 
Sbjct: 177 M----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 232

Query: 358 FDESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              ++N L   ++  ++      +N +++     G+   A  +  +M +++I  D  ++N
Sbjct: 233 TVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYN 292

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +     A +LL  M+   + PD  T+SA +    K   + +A  ++ ++  +
Sbjct: 293 CMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPR 352

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
           S++  +++YS +++G C+  ++  A  +F      GCS    +FN LI G C  ++VD  
Sbjct: 353 SIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDG 412

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           I+L      +G    T TYT ++ G  +   L  A+DL   L +M+  G   +V     L
Sbjct: 413 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL---LQEMISSGVCPNVVTCNTL 469

Query: 589 IQSMSEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVS 637
           +  + +  KLKD    F  M K+           G+ PD +T   L+ GL +  +     
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAE 529

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               ++     V D+  Y+ +I+GL K+    +A+ + D M  K + PD  T   L+
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 232/548 (42%), Gaps = 57/548 (10%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G  P V T N LL  L   +RI  ALD F +M    C PN  TF  ++ GL 
Sbjct: 138 TFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLC 193

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              RV ++V++L  M + G+Q     Y  I+  +C+      A+ L + M  +  ++P+ 
Sbjct: 194 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNV 253

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ L ++ R  DA+++  +M    + P    +  ++ G C  G++ ++   L++
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEE 422
                 +P     +AL+      GKFF A+ + ++M  R I     +++  I   C+   
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  +          PD  T++  + G C+    +D +++  +++   LV ++I+Y+ 
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 483 LVEGLCQVE-----------------------------------KITEAVEVFCCMSK-- 505
           L+ G CQV                                    K+ +A+E+F  M K  
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 506 ---------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
                    NG      ++NILI GL    K  +A  L       G    T TY+ ++ G
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +  + DV  +  LI    +   + D    F  M + G+V D
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW-KEGLTSQASYLL 675
             T ++L++G      +        +++S     D+     ++ GLW KE L    + L 
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLE 673

Query: 676 DLMLGKGW 683
           DL +  G+
Sbjct: 674 DLQMSVGY 681



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 225/527 (42%), Gaps = 29/527 (5%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L  AL  F  ++ +  F  T  T+  ++  L +   + E   L   M K   PNV     
Sbjct: 132 LPFALSTFGKIT-KLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK---PNVV-TFT 186

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+       RV  A+ +L  M   G + +     +  G IV+      D V     + K
Sbjct: 187 TLMNGLCREGRVVEAVALLDRMLEDGLQPN----QITYGTIVDGMCKMGDTVSALNLLRK 242

Query: 196 ----AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
               + I+PNV   N +++ L++  R   A + F  M +K   P+  T+  +I G   + 
Sbjct: 243 MEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISG 302

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R  D+  +L EM +  I  ++  ++ +I    +E K  EA  L+  M    ++P  +TY 
Sbjct: 303 RWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYS 362

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KC 369
            +I+  C+  RLD A  +       G +P    F  ++ G C   + D+ +  L +  + 
Sbjct: 363 SMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA 422

Query: 370 GYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           G V  T  +  L+   C  G    A+ +L++M    +  +  + N  +  LC+N +++ A
Sbjct: 423 GLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDA 482

Query: 427 YELLGRMVVS-----------SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            E+   M  S            V PD  TY+  + G      + +A  ++ ++  + +V 
Sbjct: 483 LEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D+I+YS +++GLC+  ++ EA ++F  M     S    +FN LI G C    VD  + L 
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELF 602

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
                 G      TY  ++ G  K+      L +  +M+  G   D 
Sbjct: 603 CEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDT 649



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 194/422 (45%), Gaps = 20/422 (4%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V ++N ++  + ++ R  +D   ++ EM +  I P++ T N ++     + R   A   
Sbjct: 252 NVVIYNTIIDGLWKDGR-HSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            + M ++   P+  TF  +I   +   +  ++  +  EM    I      Y+ +I   C+
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           +N+L+ A  +F +       PD +T+  LI   C   R+DD   +L +M   GL      
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMA 400
           +  ++ G C+VG  + + + L++       P+    N LL+  C+ GK   A  + + M 
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 401 DRKI------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             K+             D  ++NI I  L    +  +A EL   M    +VPD  TYS+ 
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G CK    ++A ++F  + ++S   D ++++ L+ G C+   + + +E+FC M + G 
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL---VKLQRAKD 565
              + ++  LIYG   +  +D A+ +     SSG    T T   ++ GL    +L+RA  
Sbjct: 611 VADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVA 670

Query: 566 LL 567
           +L
Sbjct: 671 ML 672



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 51/280 (18%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEM 193
           +L+  +    RV+  +++L  M   G   +   +  ++     V +     D +   +EM
Sbjct: 398 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL---QEM 454

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-----------KGCCPNSRTFEI 242
           + +G+ PNV T N LL+ L +  +++ AL+ F+ M K            G  P+ +T+ I
Sbjct: 455 ISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNI 514

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GLI   +  ++  +  EM   GI  +   Y+ +I  LC++++L+EA ++F  M +  
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 574

Query: 303 LMPDELTYEELINCLCENLRLDD-----------------------------------AN 327
             PD +T+  LI   C+   +DD                                   A 
Sbjct: 575 FSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGAL 634

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           DI ++MI  G+ P      +++ GL    + + +V  LED
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLED 674



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 14/248 (5%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I      G++   + L Q M+     PNV     +L+    ++ ++  A+ +   
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVV-TCNTLLDGLCDNGKLKDALEMFKA 488

Query: 157 MNSG-----------GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           M              G +  V  +N+++  ++ E + F +   +Y+EM   GIVP+  T 
Sbjct: 489 MQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGK-FLEAEELYEEMPHRGIVPDTITY 547

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + +++ L + +R++ A   F  M  K   P+  TF  +I G      VDD + +  EM  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI  +   Y  +I    + + ++ A+ +F+ M +  + PD +T   ++  L     L+ 
Sbjct: 608 RGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELER 667

Query: 326 ANDILEDM 333
           A  +LED+
Sbjct: 668 AVAMLEDL 675


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 246/541 (45%), Gaps = 31/541 (5%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +++YK+M  A + P   T N L+  L E   +E+A + F +M +KGC PN  +  I+++G
Sbjct: 138 IWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                     + +L EM   G       Y  +I  LC E +  EA +L + MR + L PD
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIV---IGLTPTDDVFVDI-VRGLCEVGKFDESV 362
            +T+   I  LC++ ++ +A+ I  DM +   +GL   + V  ++ + G C  G F+E+ 
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 363 NFLEDKCGYVT---SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
              +      T     +N  +     +GK   A  IL +MA++ I  +  S+NI +  LC
Sbjct: 318 AIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +      A  +LG M  S V PD  TYS  + G C+     +A  V R++       +  
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           + + L+  L +  + +EA ++   M++ G  L + + N +I GLC    +DKAI + S  
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 539 YSSGTSYTTS-----------------------TYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           ++ G++   +                       TY  I+ GL K+ R  +    L +M+ 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +  + D   +   I +  +Q KL         M K G      T  SL+ GL   +Q+  
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           +   ++++       +   YN +I+ L + G    A+ LLD ML KG  P+  T  +L+G
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677

Query: 696 S 696
           +
Sbjct: 678 A 678



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 251/580 (43%), Gaps = 43/580 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKR 181
           PN R A  +++ S     +   A +++  M   G    +  FN  +      G I+E  R
Sbjct: 221 PN-RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASR 279

Query: 182 GFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
            F D   + +EM   G+  PN  T N +LE        E A   F  M K     + R++
Sbjct: 280 IFRDMQ-IDEEM---GLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSY 334

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I + GL+ + ++ ++  IL EM +  I+  L  Y  ++  LC+     +A  +  +MR 
Sbjct: 335 NIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRE 394

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + PD +TY  L++  C   ++ +AN +L +MI +G  P       ++  L + G+  E
Sbjct: 395 SGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASE 454

Query: 361 SVNFLE--DKCGY----VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
           + + L+  ++ GY    VT   N ++   C AG    A  I+  M  R  A   +     
Sbjct: 455 AEDLLQMMNERGYGLDNVTC--NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             L +   IR   +          +PD  TY+  + G CK+   ++A +   ++  + L 
Sbjct: 513 IDLFD---IRNNGK--------KCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            DS+ +   +   C+  K++ A  V   M K GC+ S  ++N LI GL    ++ +   L
Sbjct: 562 PDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGL 621

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G      TY  I+  L +  + KD   +L +ML +G + ++  + ILI +  +
Sbjct: 622 MDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFK 681

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHG--LADGSQL---HLVSSGINKLVSDSEV 649
                     F + +   L   +E++ S +    LA G  L    L  + +++    S  
Sbjct: 682 ACDFGAAQELFEIALS--LCGHKESLYSFMFNELLAGGETLKAKELFEAALDR----SLA 735

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           L + +Y  LI  L K+G    AS++L  M+ K +  D  +
Sbjct: 736 LKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPAS 775



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 121/546 (22%), Positives = 223/546 (40%), Gaps = 75/546 (13%)

Query: 46  QTTDYEAKIQSLRH-NLSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRF---QHTA 96
           QT + E  ++ +R   LSPD +     I  L  +  +  A +IF+ + I +     +   
Sbjct: 238 QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNT 297

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  M+      G  EE   +  +M      ++R   I ++   V   ++  A  +L  
Sbjct: 298 VTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWML-GLVRSGKLLEAHLILNE 356

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M     K ++  +N+++  +   K G F+D   +   M ++G+ P+  T + LL      
Sbjct: 357 MAEKNIKPNLYSYNILVHGLC--KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +I  A    R M + GC PN  T  I++  L    R  ++  +L  M + G  L+    
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTC 474

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRA-------------LDL----------MPDELTYEE 312
             +I  LC+   L++AI +   M               +DL          +PD +TY  
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYAT 534

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----K 368
           +I  LC+  R+D+A   L +MI   L+P   +F   +   C+ GK   +   L++     
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C      +N+L++   +  + F    ++++M +R I  +  ++N  I  L E  +++ A 
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654

Query: 428 ELLGRMVVSSVVPDCATYSAFV--------LGKCK--------LCNYEDAL--------- 462
            LL  M+   + P+  T+   +         G  +        LC ++++L         
Sbjct: 655 CLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELL 714

Query: 463 ---------RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                     +F     +SL L +  Y  L+E LC+  K+ +A  +   M     S   +
Sbjct: 715 AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPA 774

Query: 514 SFNILI 519
           SF  +I
Sbjct: 775 SFMPVI 780


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 274/578 (47%), Gaps = 29/578 (5%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           SV  FN ++GA+V  +R   D V  +Y++M +  I  ++ +   L++     +++  AL 
Sbjct: 80  SVIDFNKLMGAVVRMER--PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 137

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F ++ K G  P+  TF  ++ GL  + RV +++ +  ++     + ++  +T ++  LC
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLC 193

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG-LTPTD 342
           RE ++ EA+ L   M    L PD++TY   ++ +C+      A ++L  M  I  + P  
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 343 DVFVDIVRGLCEVGKFDESVNF---LEDKCGYVT-SPHNALLECCCNAGKFFLAKCILEK 398
            ++  I+ GLC+ G+  +S N    ++DK  +     +N ++   C +G++  A+ +L++
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 399 MADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M +RKI+ +  ++N  I    +  +  +A EL   M+   ++P+  TY++ + G CK   
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A  +F  ++ +    D  +++ L++G C  ++I + +E+   M + G   ++ ++N 
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML--- 574
           LI+G C++  ++ A+ L     SSG      T   ++ GL    + KD L +   M    
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 575 --------VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                     G   DV  Y ILI  +  + K  +    +  M   G+VPD  T  S++ G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L   S+L   +     + S S   +   +N LING  K G       L   M  +G V D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 687 AT-----THGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           A       +G     ++   +D  +    S  +PD+++
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 651



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/533 (22%), Positives = 253/533 (47%), Gaps = 21/533 (3%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           E +G  D + ++ +M+++  +P+V   N L+  +    R +  +  +++M +K    +  
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           +F I+IK   + S++  ++S  G++  LG+  ++  +T ++  LC ++++ EA+ LF  +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD LT+  L+N LC   R+ +A  +L+ M+  GL P    +   V G+C++G  
Sbjct: 178 ----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 359 DESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
             ++N L   ++  ++      ++A+++  C  G+   +  +  +M D+ I  +  ++N 
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I   C +     A  LL  M+   + P+  TY+A +    K   + +A  ++ ++  + 
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           ++ ++I+Y+ +++G C+ +++  A ++F  M+  GCS    +F  LI G C  +++D  +
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L       G    T TY  ++ G   +      L +  QM+  G   D+     L+  +
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 593 SEQNKLKDCALFFNVMVKA-----------GLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
            +  KLKD    F  M K+           G+ PD  T   L+ GL +  +         
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++     V D+  Y+ +I+GL K+    +A+ +   M  K + P+  T   L+
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/548 (22%), Positives = 236/548 (43%), Gaps = 57/548 (10%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G+ P+V T   LL  L   +R+  ALD F ++    C P+  TF  ++ GL 
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLC 193

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              RV ++V++L  M + G+Q +   Y   +  +C+      A+ L + M  +  + P+ 
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ LC++ R  D++++  +M   G+ P    +  ++ G C  G++  +   L++
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 SP    +NAL+      GKFF A  + ++M  R I  +  ++N  I   C+ + 
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A ++   M      PD  T++  + G C     +D + +  ++  + LV ++++Y+ 
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 483 LVEGLCQVE-----------------------------------KITEAVEVFCCMSKNG 507
           L+ G C V                                    K+ +A+E+F  M K+ 
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 508 CSLSSS-----------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             L +S           ++NILI GL    K  +A  L       G    T TY+ ++ G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +  + +V  +  LI    +  ++ D    F  M + G+V D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW-KEGLTSQASYLL 675
               ++L++G      ++       +++S     D+     ++ G W KE L    + L 
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 676 DLMLGKGW 683
           DL +  G+
Sbjct: 674 DLQMSVGY 681



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 211/487 (43%), Gaps = 24/487 (4%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            F  ++  +  E R   + V +   MV+ G+ P+  T    ++ + +     SAL+  R+
Sbjct: 184 TFTTLMNGLCREGR-VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242

Query: 228 M----HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
           M    H K   PN   +  +I GL  + R  DS ++  EM D GI   +  Y C+I   C
Sbjct: 243 MEEISHIK---PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
              +   A RL + M    + P+ +TY  LIN   +  +  +A ++ ++M+  G+ P   
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
            +  ++ G C+  + D + +          SP       L++  C A +      +L +M
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 400 ADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             R  +A+  ++N  I   C   ++  A +L  +M+ S V PD  T +  + G C     
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 459 EDALRVFRQVSAQSLVLDS-----------ISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           +DAL +F+ +    + LD+           ++Y+ L+ GL    K  EA E++  M   G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
               + +++ +I GLC   ++D+A ++     S   S    T+  ++ G  K  R  D L
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M   G   D   Y  LI    +   +      F  M+ +G+ PD  T+ ++L G 
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659

Query: 628 ADGSQLH 634
               +L 
Sbjct: 660 WSKEELE 666



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 194/424 (45%), Gaps = 20/424 (4%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K +V +++ ++  + ++ R  +D   ++ EM   GI PN+ T N ++     + R  +A 
Sbjct: 250 KPNVVIYSAIIDGLCKDGR-HSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              + M ++   PN  T+  +I   +   +  ++  +  EM   GI      Y  +I   
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++++L+ A  +F +M      PD  T+  LI+  C   R+DD  ++L +M   GL    
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEK 398
             +  ++ G C VG  + +++  +        P     N LL+  C+ GK   A  + + 
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 399 MADRKI------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           M   K+             D  ++NI I  L    +  +A EL   M    +VPD  TYS
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G CK    ++A ++F  + ++S   + ++++ L+ G C+  ++ + +E+FC M + 
Sbjct: 549 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL---VKLQRA 563
           G    +  +  LIYG   +  ++ A+ +     SSG    T T   ++ G     +L+RA
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 564 KDLL 567
             +L
Sbjct: 669 VAML 672



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 189/409 (46%), Gaps = 23/409 (5%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           +PN+      ++  F    R + A R+L  M       +V  +N ++ A V+E + F + 
Sbjct: 285 FPNIV-TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK-FFEA 342

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             +Y EM+  GI+PN  T N +++   + +R+++A D F  M  KGC P+  TF  +I G
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                R+DD + +L EM   G+      Y  +I   C    L  A+ L + M +  + PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +T   L++ LC+N +L DA ++ + M                    +  K D   +   
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAM--------------------QKSKMDLDASHPF 502

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           +        +N L+    N GKF  A+ + E+M  R I  D  +++  I  LC+   + +
Sbjct: 503 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A ++   M   S  P+  T++  + G CK    +D L +F ++  + +V D+I Y  L+ 
Sbjct: 563 ATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY 622

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           G  +V  I  A+++F  M  +G    + +   ++ G     ++++A+ +
Sbjct: 623 GFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 1/173 (0%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G +  V  +N+++  ++ E + F +   +Y+EM   GIVP+  T + +++ L + +R++ 
Sbjct: 504 GVEPDVLTYNILICGLINEGK-FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   F  M  K   PN  TF  +I G     RVDD + +  EM   GI  +   Y  +I 
Sbjct: 563 ATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIY 622

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
              +   +  A+ +F+ M +  + PD +T   ++        L+ A  +LED+
Sbjct: 623 GFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  ++   EDA+ +F  +     +   I ++KL+  + ++E+    + ++  M +     
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              SF ILI   C   K+  A+         G      T+T ++ GL    R  + L + 
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            Q+    C  DV  +  L+  +  + ++ +     + MV+ GL PD+ T  + + G+   
Sbjct: 175 HQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC-- 228

Query: 631 SQLHLVSSGINKLVSDSEV----LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            ++    S +N L    E+     +  +Y+ +I+GL K+G  S +  L   M  KG  P+
Sbjct: 229 -KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 687 ATTHGLLVGS 696
             T+  ++G 
Sbjct: 288 IVTYNCMIGG 297



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 12/243 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F     +N A+ +   M S G    +   N +L  + +  +   D + ++K M K
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK-LKDALEMFKAMQK 491

Query: 196 A-----------GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           +           G+ P+V T N L+  L    +   A + +  M  +G  P++ T+  +I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GL   SR+D++  +   M        +  +  +I   C+  ++++ + LF  M    ++
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            D + Y  LI    +   ++ A DI ++MI  G+ P      +++ G     + + +V  
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671

Query: 365 LED 367
           LED
Sbjct: 672 LED 674


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 142/565 (25%), Positives = 253/565 (44%), Gaps = 12/565 (2%)

Query: 146 RVNGAMRVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV----P 200
           RV  AM VL+  M+  G   +V  +N +L    +E R  A+       M+  G V    P
Sbjct: 145 RVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENR--AEEALELLHMMADGQVRSCPP 202

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N+ + N ++   F   +++ A + F  M  +G  PN  T+ IVI GL     VD +  + 
Sbjct: 203 NLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVF 262

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            +M D G++  +  YTC+I       + +E +R+ K M A  L PD  TY  L++ LC+ 
Sbjct: 263 QQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKK 322

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
            +  +A  + + MI  G+ P   ++  I+ G    G   E  +FL+   G   SP++ + 
Sbjct: 323 GKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIF 382

Query: 381 EC--CCNAGKFFLAKC--ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
               C  A K  + +   I  KM  + ++ +  ++   I  LC+   +  A     +M+ 
Sbjct: 383 NIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMIN 442

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             V P+   +++ V G C +  +E A  +F ++  Q +  + + ++ ++  LC   ++ +
Sbjct: 443 EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK 502

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  +   M + G      S+N LI G C++ K D+A +L  +  S G      TY  ++ 
Sbjct: 503 AQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLH 562

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  +  R  D   V  +ML  G    V  Y  ++  + +  +  +    +  M+ +G   
Sbjct: 563 GYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQW 622

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
              T   +L+GL+  + +         L S    +D   +NI+I  L K+G    A  L 
Sbjct: 623 SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLF 682

Query: 676 DLMLGKGWVPDATTHGLLVGSSVGE 700
             +   G VPD TT+ L+  + + E
Sbjct: 683 ATISANGLVPDVTTYRLIAENLIEE 707



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 225/524 (42%), Gaps = 32/524 (6%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           + + V + KEM   G+ P+  T   LL+ L +  +   A   F  M +KG  P+   + I
Sbjct: 290 WKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGI 349

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ G      + +  S L  M   GI      +  +     ++  + EA+ +F  MR   
Sbjct: 350 ILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG 409

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L P+ + Y  LI+ LC+  R+DDA      MI  G+ P   VF  +V GLC + K+++  
Sbjct: 410 LSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEK-- 467

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
                                  AG+ F       +M ++ I  +   +N  +  LC   
Sbjct: 468 -----------------------AGELFF------EMVNQGIHPNVVFFNTIMCNLCTEG 498

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + KA  L+  M      PD  +Y+A + G C +   ++A ++   + +  L  +  +Y+
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYN 558

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ G C+  +I +A  VF  M  NG +    ++N +++GL   R+  +A  L     +S
Sbjct: 559 TLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITS 618

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G  ++  TY  I+ GL K     + L +   +  +   +D+  + I+I ++ +  + +D 
Sbjct: 619 GKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDA 678

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F  +   GLVPD  T   +   L +   L       +++       +S M N L+  
Sbjct: 679 MNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRR 738

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           L   G  S+A   L  +  K +  +A+T  +L+     EE  ++
Sbjct: 739 LLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAK 782



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 180/435 (41%), Gaps = 45/435 (10%)

Query: 305 PDELTYEELINCLCENLRLD------------------------------DANDILEDMI 334
           PD  TY  L+ C C   RL+                              DA  + E M 
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 335 V-------IGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-------DKCGYVTSPHNALL 380
           V       +G TP    +  +++G C+  + +E++  L          C      +N ++
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                 G+   A  +   M D+ I  +  ++ I I  LC+ + + +A  +  +M+   V 
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY+  + G   +  +++ +R+ +++SA  L  D  +Y  L++ LC+  K TEA ++
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M + G     S + I+++G      + +      L   +G S     +  +     K
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                + + +  +M  +G + +V  Y  LI ++ +  ++ D  L FN M+  G+ P+   
Sbjct: 392 KAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVV 451

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             SL++GL    +         ++V+     +   +N ++  L  EG   +A  L+DLM 
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME 511

Query: 680 GKGWVPDATTHGLLV 694
             G  PD  ++  L+
Sbjct: 512 RVGTRPDIISYNALI 526



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 5/264 (1%)

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS-LVLDSISYSKLVEGLCQVEKIT 494
           S V PD  TYS  V   C++   E     F  +      V D +  ++L++GLC  +++ 
Sbjct: 88  SKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVG 147

Query: 495 EAVEVFC-CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS---TY 550
           EA+ V    MS+ GC+ +  S+N L+ G C   + ++A+ L  +              +Y
Sbjct: 148 EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSY 207

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ G     +      +   M  +G   +V  Y I+I  + +   +      F  M+ 
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID 267

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G+ P+  T   L+HG     Q   V   + ++ +     D   Y +L++ L K+G  ++
Sbjct: 268 KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE 327

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A  L D M+ KG  PD + +G+++
Sbjct: 328 ARKLFDSMIRKGIKPDVSIYGIIL 351



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 131/342 (38%), Gaps = 42/342 (12%)

Query: 59  HNLSPDHLIR-----VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + +SP+H I             +  A+ IF  +  Q+        Y  +I  L   G V+
Sbjct: 373 NGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMR-QQGLSPNVVNYATLIDALCKLGRVD 431

Query: 114 EMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           + E     M+ E   PN+     SLV+      +   A  +   M + G   +V  FN +
Sbjct: 432 DAELKFNQMINEGVAPNI-VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490

Query: 173 LGAIVEEKR--------------GFADFVFVYKEMVKA--------------------GI 198
           +  +  E R              G    +  Y  +++                     G+
Sbjct: 491 MCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGL 550

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PN  T N LL       RI+ A   F+ M   G  P   T+  ++ GL    R  ++  
Sbjct: 551 KPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKE 610

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +   M   G Q  +  Y  I+  L + N ++EA+++F+ + + DL  D +T+  +I  L 
Sbjct: 611 LYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALL 670

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           ++ R +DA ++   +   GL P    +  I   L E G  +E
Sbjct: 671 KDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEE 712



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/298 (19%), Positives = 119/298 (39%), Gaps = 51/298 (17%)

Query: 31  NTI--PLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIR---VLDNTNDLSSALKIFKW 85
           NTI   L +E  ++K+ +  D   ++ +    +S + LIR   ++  T++ S  L I   
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547

Query: 86  VSIQKR---FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFV 142
           V ++     +      YC+        G +++   + Q M+      V     +++    
Sbjct: 548 VGLKPNECTYNTLLHGYCR-------DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLF 600

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL----------------------------- 173
              R + A  + +NM + G + S+  +N++L                             
Sbjct: 601 KTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDII 660

Query: 174 ------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
                 GA++++ R   D + ++  +   G+VP+V T   + E L E   +E     F  
Sbjct: 661 TFNIMIGALLKDGRK-EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSE 719

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           M K GC PNS     +++ L+    +  + + L ++ +    LE S  + +I +  RE
Sbjct: 720 MEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSRE 777


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 234/505 (46%), Gaps = 14/505 (2%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI---ANSRVDDSVSILGEMFDLGIQLEL 272
           NR   A   F RM +    PN  T   +I  L+   +   V  S +I  ++  LG+++  
Sbjct: 153 NRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNT 212

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + +  +I   C ENKL EAI L   M+     PD ++Y  +++ LC+  +L++A D+L D
Sbjct: 213 NTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLD 272

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           M   GL P  + F  +V G C++G   E+   ++        P    +N L+   C  GK
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  + ++M + K+  D  ++N  I    +     K +EL+ +M    V P+  TY+ 
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            V    K    ++A    R++       D ++++ L+ G C+  +++EA  +   MS+ G
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
             ++S + N +++ LC  RK+D A +L S A   G      +Y  +++G  K  ++ + +
Sbjct: 453 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAM 512

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M  +     +  Y  +I  +    K        N ++++GLVPD  T  +++ G 
Sbjct: 513 KLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGY 572

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               Q+       NK+V  S   D    NIL+ GL  EG+  +A  L +  + KG   DA
Sbjct: 573 CREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDA 632

Query: 688 TTHGLLVGSSVGEEIDSRRF--AFD 710
            T+  ++     E+    RF  AFD
Sbjct: 633 VTYNTIISGLCKED----RFEEAFD 653



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/575 (21%), Positives = 256/575 (44%), Gaps = 34/575 (5%)

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           ++  ++R  L + + ++V   R + A ++   M     K ++   N ++ A+V      +
Sbjct: 133 KKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPS 192

Query: 185 DFV--FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            ++   ++ +++K G+  N +T N L+      N++  A+    +M    C P++ ++  
Sbjct: 193 VYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNT 252

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++  L    +++++  +L +M + G+    + +  ++   C+   L+EA ++  +M   +
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           ++PD  TY  LI  LC++ ++D+A  + ++M  + L P      D+V             
Sbjct: 313 VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLP------DVV------------- 353

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
                        +N L+  C +         +++KM  + +  +  ++N+ ++W  +  
Sbjct: 354 ------------TYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEG 401

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++  A   L +M  S   PDC T++  + G CK     +A R+  ++S + L ++S++ +
Sbjct: 402 KMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLN 461

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC   K+ +A ++    SK G  +   S+  LI G     K  +A++L       
Sbjct: 462 TILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK 521

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
               +  TY  ++ GL    +    +  L ++L  G   D   Y  +I     + +++  
Sbjct: 522 EIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKA 581

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
             F N MVK    PD  T   LL GL     L       N  +S  + +D+  YN +I+G
Sbjct: 582 FQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISG 641

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           L KE    +A  LL  M  K   PD  T+  ++ +
Sbjct: 642 LCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/505 (22%), Positives = 225/505 (44%), Gaps = 47/505 (9%)

Query: 161 GFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           G K++ + FN+++ G  +E K   ++ + +  +M      P+  + N +L+VL +  ++ 
Sbjct: 207 GVKVNTNTFNILIYGCCIENK--LSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLN 264

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A D    M   G  PN  TF I++ G      + ++  ++  M    +  ++  Y  +I
Sbjct: 265 EARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLI 324

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC++ K++EA RL   M  L L+PD +TY  LIN   +        ++++ M   G+ 
Sbjct: 325 GGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVK 384

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPH----NALLECCCNAGKFFLAK 393
           P    +  +V+   + GK D + N L   ++ G+  SP     N L+   C AG+   A 
Sbjct: 385 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF--SPDCVTFNTLINGYCKAGRLSEAF 442

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG--------------------- 431
            ++++M+ + +  +  + N  +  LC   ++  AY+LL                      
Sbjct: 443 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY 502

Query: 432 --------------RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                          M    ++P   TY+  + G C     + ++    ++    LV D 
Sbjct: 503 FKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDE 562

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y+ ++ G C+  ++ +A +    M K        + NIL+ GLC    +DKA++L + 
Sbjct: 563 TTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNT 622

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S G +    TY  I+ GL K  R ++   +LA+M  +    D   Y  ++ ++++  +
Sbjct: 623 WISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGR 682

Query: 598 LKDCALFFNVMVKAGLVPDRETMLS 622
           +K+   F + +V+ G + D+   L+
Sbjct: 683 MKEAEEFMSRIVEQGKLQDQTISLN 707



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 179/413 (43%), Gaps = 20/413 (4%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G K +   +NVV+   V+E +   +     ++M ++G  P+  T N L+    +  
Sbjct: 378 MEGKGVKPNAVTYNVVVKWYVKEGK-MDNAGNELRKMEESGFSPDCVTFNTLINGYCKAG 436

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+  A      M +KG   NS T   ++  L    ++DD+  +L      G  ++   Y 
Sbjct: 437 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYG 496

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I    ++ K  EA++L+  M+  +++P  +TY  +I  LC + + D + D L +++  
Sbjct: 497 TLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLES 556

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA 392
           GL P +  +  I+ G C  G+ +++  F          P     N LL   C  G    A
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKA 616

Query: 393 -KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            K     ++  K  D  ++N  I  LC+ +   +A++LL  M    + PDC TY+A +  
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLD-SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
                  ++A     ++  Q  + D +IS +K         KI  + E       N    
Sbjct: 677 LADAGRMKEAEEFMSRIVEQGKLQDQTISLNK--------RKIESSSETSQESDPN---- 724

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            S +F+  I  LC   K   A+ +   +   G +   STY  +M GL+K +++
Sbjct: 725 -SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKS 776


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 159/651 (24%), Positives = 295/651 (45%), Gaps = 25/651 (3%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           L   LS   L ++L       SAL +F   S Q  + H+   +  ++ +L     V  + 
Sbjct: 4   LPKPLSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVT 63

Query: 117 GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVVLGA 175
            + + +  ++     + +++++ ++      N A+     M    G K  +  +N +L A
Sbjct: 64  RIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNA 123

Query: 176 IVE----EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
            +E    EK   A+    Y E V  GI+PN+ T N L+++  +  +   A      M  K
Sbjct: 124 FIEANLLEK---AESFLAYFETV--GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSK 178

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
              P+  ++  VI G++ +  +  ++ +  EMF+ G+  ++  Y  +I    +     + 
Sbjct: 179 DLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQG 238

Query: 292 IRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
             ++ ++++   + P+ +TY  +IN LC+  R D++ ++ E M           +  ++ 
Sbjct: 239 KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLIC 298

Query: 351 GLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           GLC+VG  D +V   ++            +NALL   C AGK   +  +   M      +
Sbjct: 299 GLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHN 358

Query: 407 CDSWNIPIRWLCENEEIRKA---YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             S+NI IR L EN ++ +A   +ELL R    +   D  TY   + G CK  +   AL+
Sbjct: 359 VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGA---DSTTYGVLIHGLCKNGHLNKALK 415

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           + ++       LD+ +YS +V+GL +  ++ EA+ +   M K GC LS    N LI G  
Sbjct: 416 ILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFV 475

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              K+++AI       + G S T  +Y  ++ GL K +R  D    + +ML +    D+ 
Sbjct: 476 RASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMI 535

Query: 584 AYCILIQSMSEQNKLKDCA--LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
            Y +L+  + +  K+ D A  L+  V+VK GL PD      L+HGL    ++       +
Sbjct: 536 TYSLLMDGLCQGKKI-DMALNLWRQVLVK-GLEPDVTMHNILMHGLCSAGKIEDALLLYS 593

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
            +   + + +   +N L++GL+K      AS +   M   G+ PD  ++ +
Sbjct: 594 NMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNI 644



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 231/499 (46%), Gaps = 8/499 (1%)

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           D +  +L+   ++     ALD F++M +  GC P  R++  ++   I  + ++ + S L 
Sbjct: 79  DVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLA 138

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
               +GI   L  Y  +I +  ++ +  EA  L   M + DL PD  +Y  +IN + ++ 
Sbjct: 139 YFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSG 198

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTS-PH 376
            L  A ++ ++M   GL P    +  ++ G  + G + +     E      C Y     +
Sbjct: 199 DLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTY 258

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N ++   C  G+F  +  + E+M   +   D  +++  I  LC+   +  A E+   MV 
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            SVV D  TY+A + G C+    +++  ++  +  ++   + +SY+  + GL +  K+ E
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHNVVSYNIFIRGLFENRKVEE 377

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+ V+  + + G    S+++ +LI+GLC    ++KA+++   A   G       Y+ I+ 
Sbjct: 378 AISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVD 437

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL K  R  + L ++ QM   GC L       LI      +KL++   FF  M   G  P
Sbjct: 438 GLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSP 497

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
              +  +L++GL    +     S + +++      D   Y++L++GL +      A  L 
Sbjct: 498 TVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLW 557

Query: 676 DLMLGKGWVPDATTHGLLV 694
             +L KG  PD T H +L+
Sbjct: 558 RQVLVKGLEPDVTMHNILM 576



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 185/379 (48%), Gaps = 6/379 (1%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V VYKEMVK  +V +V T N LL       +I+ + + +  M K+ C  N  ++ I I+G
Sbjct: 310 VEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRG 368

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  N +V++++S+   +   G   + + Y  +I  LC+   L +A+++ K  +      D
Sbjct: 369 LFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLD 428

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
              Y  +++ L +  R+D+A  I+  M   G   +  V   ++ G     K +E++ F  
Sbjct: 429 AFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFR 488

Query: 367 D----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           +     C      +N L+   C A +F  A   +++M ++    D  ++++ +  LC+ +
Sbjct: 489 EMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGK 548

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           +I  A  L  +++V  + PD   ++  + G C     EDAL ++  +   + + + ++++
Sbjct: 549 KIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHN 608

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L++GL +  +   A  ++ CM KNG      S+NI + GLC   ++   I L   A  +
Sbjct: 609 TLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKN 668

Query: 542 GTSYTTSTYTKIMLGLVKL 560
           G   T+ T+  ++  ++KL
Sbjct: 669 GILPTSITWYILVRAVLKL 687



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 218/520 (41%), Gaps = 80/520 (15%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF---VYKEMVKAGIV-PNVDTL 205
           A+ V   M   G    V  +N+++      KRG  D+V    +++ +VK   V PNV T 
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFF--KRG--DYVQGKEIWERLVKGSCVYPNVVTY 258

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N ++  L +  R + +L+ + RM K  C  +  T+  +I GL     VD +V +  EM  
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318

Query: 266 LGIQLELSFYTCIIPMLCR---------------------------------EN-KLEEA 291
             + +++  Y  ++   CR                                 EN K+EEA
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEA 378

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           I +++++R      D  TY  LI+ LC+N  L+ A  IL++    G       +  IV G
Sbjct: 379 ISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDG 438

Query: 352 LCEVGKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIADC 407
           L + G+ DE++  +   DK G   SPH  N L+     A K   A C   +M  +  +  
Sbjct: 439 LSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCS-- 496

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
                                           P   +Y+  + G CK   + DA    ++
Sbjct: 497 --------------------------------PTVVSYNTLINGLCKAERFSDAYSFVKE 524

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +    D I+YS L++GLCQ +KI  A+ ++  +   G     +  NIL++GLC   K
Sbjct: 525 MLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGK 584

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           ++ A+ L S    S       T+  +M GL K +  +   V+ A M   G   D+ +Y I
Sbjct: 585 IEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNI 644

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            ++ +    ++ D    F+  +K G++P   T   L+  +
Sbjct: 645 TLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAV 684



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 194/440 (44%), Gaps = 13/440 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  MI  L   G  +E   + + M K           SL+    +   V+GA+ V   M
Sbjct: 257 TYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316

Query: 158 NSGGFKLSVDVFNVVLGAIVEE---KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
                 + V  +N +L         K  F  +V + KE        NV + N  +  LFE
Sbjct: 317 VKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-----NVVSYNIFIRGLFE 371

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             ++E A+  +  + ++G   +S T+ ++I GL  N  ++ ++ IL E  D G +L+   
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFA 431

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y+ I+  L ++ +++EA+ +   M              LIN      +L++A     +M 
Sbjct: 432 YSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREME 491

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G +PT   +  ++ GLC+  +F ++ +F+++       P    ++ L++  C   K  
Sbjct: 492 TKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKID 551

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           +A  +  ++  + +  D    NI +  LC   +I  A  L   M  S+ +P+  T++  +
Sbjct: 552 MALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLM 611

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G  K    E A  ++  +       D ISY+  ++GLC   +I++ + +F    KNG  
Sbjct: 612 DGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGIL 671

Query: 510 LSSSSFNILIYGLCVMRKVD 529
            +S ++ IL+  +  +  +D
Sbjct: 672 PTSITWYILVRAVLKLGPLD 691



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 136/297 (45%), Gaps = 8/297 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK- 124
           LI  L     L+ ALKI K        +  A  Y  ++  L   G V+E  G+   M K 
Sbjct: 400 LIHGLCKNGHLNKALKILKEAK-DGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY 458

Query: 125 --ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
             E  P+V   LI+    FV   ++  A+     M + G   +V  +N ++  + + +R 
Sbjct: 459 GCELSPHVCNPLIN---GFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAER- 514

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F+D     KEM++    P++ T + L++ L +  +I+ AL+ +R++  KG  P+     I
Sbjct: 515 FSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNI 574

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ GL +  +++D++ +   M        L  +  ++  L +  + E A  ++  M    
Sbjct: 575 LMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNG 634

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
             PD ++Y   +  LC   R+ D   + +D +  G+ PT   +  +VR + ++G  D
Sbjct: 635 FQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 256/553 (46%), Gaps = 33/553 (5%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVN-----MNSGGFKLSVDVFNVVLGAIVEEKR--GFAD 185
           A + L     +   V   MR+ V      ++ G   ++ +    ++ A  E  R    AD
Sbjct: 76  AALELFRRLASRQDVRHLMRLYVTAATTFVDRGSLPMAHEAMRRMVAAFAEAGRLPEAAD 135

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVI 244
            VF   EM   G+   V+T N++L    +T     A   F  M  + G  P++R+F  +I
Sbjct: 136 MVF---EMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALI 192

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G   + R+++  ++L  M   G  L+ +  T I+ + C++ +  +   LF+ M  +   
Sbjct: 193 VGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTP 252

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN- 363
           P+ + Y   I+ LC+   +  A  +LE+M+  GL P       ++ GLC++G  + +   
Sbjct: 253 PNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRL 312

Query: 364 FLE--DKCGYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLC 418
           FL+      Y  + H    ++   C  GK   A+ +L +M ++ +A + +++   I   C
Sbjct: 313 FLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHC 372

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +      A+EL+ +M      P+  TY+A + G CK    ++A +V R  + Q L LD +
Sbjct: 373 KEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKV 432

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ ++   C+   IT A+++F  M++NGC     ++  LI   C  R+++++ +L    
Sbjct: 433 TYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKC 492

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            +     T  TYT ++ G  K+ ++   L V  +M+  GC  D   Y  LI  + ++++L
Sbjct: 493 LAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRL 552

Query: 599 KDCALFFNVMVKAGLVP-------------DRE---TMLSLLHGLADGSQLHLVSSGINK 642
           ++    +  M+   LVP              RE     +S+L  L    + H V+  + K
Sbjct: 553 EEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNVLVRK 612

Query: 643 LVSDSEVLDSSMY 655
           L +   V D+S++
Sbjct: 613 LSAIGHVEDASLF 625



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/393 (22%), Positives = 165/393 (41%), Gaps = 31/393 (7%)

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L+PD  ++  LI   C + R+++ + +L  M   G    +     IVR  C+ G+F +  
Sbjct: 181 LLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVS 240

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                                       L + +LE      + +  +W   I  LC+   
Sbjct: 241 E---------------------------LFRRMLEMGTPPNVVNYTAW---IDGLCKRAY 270

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF-RQVSAQSLVLDSISYS 481
           +++A+ +L  MV   + P+  T+++ + G CK+   E A R+F + + + S   +  +Y+
Sbjct: 271 VKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 330

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++ G C+  K+  A  +   M + G + +++++  LI G C     + A  L +     
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      TY  ++ GL K  + ++   VL     +G  LD   Y ++I    +Q  +   
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              FN M + G  PD  T  +L+       Q+       +K ++   V     Y  +I G
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             K G ++ A  + + M+  G   D+ T+G L+
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALI 543


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 246/541 (45%), Gaps = 31/541 (5%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +++YK+M  A + P   T N L+  L E   +E+A + F +M +KGC PN  +  I+++G
Sbjct: 138 IWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                     + +L EM   G       Y  +I  LC E +  EA +L + MR + L PD
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIV---IGLTPTDDVFVDI-VRGLCEVGKFDESV 362
            +T+   I  LC++ ++ +A+ I  DM +   +GL   + V  ++ + G C  G F+E+ 
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 363 NFLEDKCGYVT---SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
              +      T     +N  +     +GK   A  IL +MA++ I  +  S+NI +  LC
Sbjct: 318 AIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +      A  +LG M  S V PD  TYS  + G C+     +A  V R++       +  
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           + + L+  L +  + +EA ++   M++ G  L + + N +I GLC    +DKAI + S  
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 539 YSSGTSYTTS-----------------------TYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           ++ G++   +                       TY  I+ GL K+ R  +    L +M+ 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +  + D   +   I +  +Q KL         M K G      T  SL+ GL   +Q+  
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           +   ++++       +   YN +I+ L + G    A+ LLD ML KG  P+  T  +L+G
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677

Query: 696 S 696
           +
Sbjct: 678 A 678



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 251/580 (43%), Gaps = 43/580 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKR 181
           PN R A  +++ S     +   A +++  M   G    +  FN  +      G I+E  R
Sbjct: 221 PN-RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASR 279

Query: 182 GFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
            F D   + +EM   G+  PN  T N +LE        E A   F  M K     + R++
Sbjct: 280 IFRDMQ-IDEEM---GLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSY 334

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I + GL+ + ++ ++  IL EM +  I+  L  Y  ++  LC+     +A  +  +MR 
Sbjct: 335 NIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRE 394

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + PD +TY  L++  C   ++ +AN +L +MI +G  P       ++  L + G+  E
Sbjct: 395 SGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASE 454

Query: 361 SVNFLE--DKCGY----VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
           + + L+  ++ GY    VT   N ++   C AG    A  I+  M  R  A   +     
Sbjct: 455 AEDLLQMMNERGYGLDNVTC--NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             L +   IR   +          +PD  TY+  + G CK+   ++A +   ++  + L 
Sbjct: 513 IDLFD---IRNNGK--------KCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            DS+ +   +   C+  K++ A  V   M K GC+ S  ++N LI GL    ++ +   L
Sbjct: 562 PDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGL 621

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G      TY  I+  L +  + KD   +L +ML +G + ++  + ILI +  +
Sbjct: 622 MDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFK 681

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHG--LADGSQL---HLVSSGINKLVSDSEV 649
                     F + +   L   +E++ S +    LA G  L    L  + +++    S  
Sbjct: 682 ACDFGAAQELFEIALS--LCGHKESLYSFMFNELLAGGETLKAKELFEAALDR----SLA 735

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           L + +Y  LI  L K+G    AS++L  M+ K +  D  +
Sbjct: 736 LKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPAS 775



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 121/546 (22%), Positives = 223/546 (40%), Gaps = 75/546 (13%)

Query: 46  QTTDYEAKIQSLRH-NLSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRF---QHTA 96
           QT + E  ++ +R   LSPD +     I  L  +  +  A +IF+ + I +     +   
Sbjct: 238 QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNT 297

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  M+      G  EE   +  +M      ++R   I ++   V   ++  A  +L  
Sbjct: 298 VTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWML-GLVRSGKLLEAHLILNE 356

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M     K ++  +N+++  +   K G F+D   +   M ++G+ P+  T + LL      
Sbjct: 357 MAEKNIKPNLYSYNILVHGLC--KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +I  A    R M + GC PN  T  I++  L    R  ++  +L  M + G  L+    
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTC 474

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRA-------------LDL----------MPDELTYEE 312
             +I  LC+   L++AI +   M               +DL          +PD +TY  
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYAT 534

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----K 368
           +I  LC+  R+D+A   L +MI   L+P   +F   +   C+ GK   +   L++     
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C      +N+L++   +  + F    ++++M +R I  +  ++N  I  L E  +++ A 
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654

Query: 428 ELLGRMVVSSVVPDCATYSAFV--------LGKCK--------LCNYEDAL--------- 462
            LL  M+   + P+  T+   +         G  +        LC ++++L         
Sbjct: 655 CLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELL 714

Query: 463 ---------RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                     +F     +SL L +  Y  L+E LC+  K+ +A  +   M     S   +
Sbjct: 715 AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPA 774

Query: 514 SFNILI 519
           SF  +I
Sbjct: 775 SFMPVI 780


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 264/584 (45%), Gaps = 40/584 (6%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  V+  M S G  LSV  +NV +  + + +R + + V +   +   G+  +V T   L+
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW-EAVEIKNLLSYKGLRADVGTYCTLV 292

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +    E+  +    M + G  P+      ++ GL     +  +  ++ ++   G+ 
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             L  Y  +I  +C++ KL+EA  LF  M    L P+++TY  LI+  C+  +LD A   
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           L  M  +G+  T   +  ++ G C++GK   + +  ++       P    + +L+   C 
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G+   A  +  +M  + I+ +  ++   I  LC    + +A +L G MV  +V+P+  T
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK  N   A  +  ++  + LV D+ +Y  L+ GLC   +++EA E    + 
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
                L+   F+ L++G C   ++D A+         G +     Y+ ++ G+++ Q  +
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRR 652

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
            ++ +L QM  +G   D   Y  +I + ++   LK     +++MV  G +P+  T  +L+
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALI 712

Query: 625 HGLA-----DGSQL----------------------HLVSSG-INKLVSDSEVL------ 650
           +GL      D ++L                      +L S G I K +   +VL      
Sbjct: 713 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA 772

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++  YNILI G  K G   +A+ +L  M+  G  PD  ++  ++
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 160/712 (22%), Positives = 298/712 (41%), Gaps = 61/712 (8%)

Query: 39  TDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTAD 97
           TD+++ +Q+         +   L P H+ +VL  T D S  AL+ F ++ + K F H+  
Sbjct: 35  TDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTT 94

Query: 98  TYCKMILKLGLAGNV---------------EEMEGLCQNMVKE-RYPNVREALIS--LVF 139
           ++C +I  L +  N+                  EGL ++ +   R  N    L    L+ 
Sbjct: 95  SFCILIHAL-VQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQ 153

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
           ++V + R    + V+  M   G    +   + VL  ++   R F   + ++ E+V +G+ 
Sbjct: 154 TYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIR-IRQFRMALHLFDEIVSSGLR 212

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V     ++  L E      A +   RM   GC  +  T+ + I+GL  N RV ++V I
Sbjct: 213 PDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI 272

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
              +   G++ ++  Y  ++  LC+  + E    +   M     +P E     L++ L +
Sbjct: 273 KNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRK 332

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA- 378
              +  A D++  +   G+ P+  V+  ++  +C+ GK DE+ +   +       P++  
Sbjct: 333 KGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVT 392

Query: 379 ---LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
              L++  C  GK  +A   L KM +  I A    ++  I   C+  ++R A  L   M+
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            + + P+   Y++ + G CK     +A R++ +++ + +  ++ +++ L+ GLC   ++ 
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA ++F  M +     +  ++N+LI G C      +A  L       G    T TY  ++
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 555 LGL-----------------------------------VKLQRAKDLLVVLAQMLVEGCA 579
            GL                                    K  R  D L    +ML  G A
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVA 632

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           +D+  Y +LI  +  Q   +        M   GL PD     +++   A    L +    
Sbjct: 633 MDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGL 692

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            + +VS+  + +   Y  LINGL K GL  +A  L   ML    +P+  T+ 
Sbjct: 693 WDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 744



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 214/502 (42%), Gaps = 50/502 (9%)

Query: 218 IESALDQFRRMHKKGCCPNSRT--FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            ES LD +R+      C  S T  F+++I+  + N R  D + ++  M D GI  ++   
Sbjct: 130 FESFLDSYRK------CNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTL 183

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           + ++  L R       IR F+M                            A  + ++++ 
Sbjct: 184 SGVLNGLIR-------IRQFRM----------------------------ALHLFDEIVS 208

Query: 336 IGLTPTDDVFVDIVRGLCEVGKF---DESVNFLEDK-CGYVTSPHNALLECCCNAGKFFL 391
            GL P   V+  +VR LCE+  F    E +  +E   C    + +N  +   C   + + 
Sbjct: 209 SGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWE 268

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  I   ++ + + AD  ++   +  LC+ EE     E++  M+    VP  A  S  V 
Sbjct: 269 AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVD 328

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  K  N   A  +  +V    +      Y+ L+  +C+  K+ EA  +F  M   G   
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  +++ILI   C   K+D A+         G   T   Y+ ++ G  KL + +    + 
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   +V  Y  LI    ++ +L +    ++ M   G+ P+  T  +L+ GL   
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           +++   +    ++V  + + +   YN+LI G  KEG T +A  LLD M+ KG VPD  T+
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 691 GLLVGS--SVGEEIDSRRFAFD 710
             L+    S G   ++R F  D
Sbjct: 569 RPLISGLCSTGRVSEAREFMND 590



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 194/440 (44%), Gaps = 41/440 (9%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     SL+  +     ++ A R+   M   G   +   F  ++  +    R  A+  
Sbjct: 458 PNV-VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR-MAEAN 515

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            ++ EMV+  ++PN  T N L+E   +      A +    M +KG  P++ T+  +I GL
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575

Query: 248 IANSRV-----------------------------------DDSVSILGEMFDLGIQLEL 272
            +  RV                                   DD++    EM   G+ ++L
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDL 635

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y+ +I  + R+      I L K M    L PD + Y  +I+   +   L  A  + + 
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDI 695

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC----CCNAGK 388
           M+  G  P    +  ++ GLC++G  D++     +     + P+     C      + G 
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 755

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
              A  + + + +  +A+  ++NI IR  C+   I++A E+L  M+ S + PDC +YS  
Sbjct: 756 IEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTI 815

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   C+  + ++A++++  +  + +  D+++Y+ L+ G C   ++T+A E+   M + G 
Sbjct: 816 IYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGV 875

Query: 509 SLSSSSFNILIYGLCVMRKV 528
             + +++N LI+G C+M  V
Sbjct: 876 KPNRATYNSLIHGTCLMSSV 895



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 137/635 (21%), Positives = 257/635 (40%), Gaps = 76/635 (11%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
            IR L     +  A++I   +S  K  +    TYC ++L L      E  E +   M++ 
Sbjct: 256 FIRGLCKNQRVWEAVEIKNLLSY-KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF 314

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE------ 179
            +     A+ +LV        +  A  ++  +   G   S+ V+N ++ ++ ++      
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374

Query: 180 ---------------------------KRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEV 211
                                      KRG  D    +  +M + GI   V   + L+  
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +  ++ +A   F  M   G  PN   +  +I G      + ++  +  EM   GI   
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
              +T +I  LC  N++ EA +LF  M   +++P+E+TY  LI   C+      A ++L+
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAG 387
           +M+  GL P    +  ++ GLC  G+  E+  F+ D  G     +    +ALL   C  G
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEG 614

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           +   A     +M  R +A D   +++ I  +   ++ R   +LL +M    + PD   Y+
Sbjct: 615 RLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYT 674

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC--CMS 504
             +    K  N + A  ++  + ++  + + ++Y+ L+ GLC++  + +A E+ C   ++
Sbjct: 675 TMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA-ELLCREMLA 733

Query: 505 KN---------------------------------GCSLSSSSFNILIYGLCVMRKVDKA 531
            N                                 G   ++ ++NILI G C + ++ +A
Sbjct: 734 SNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEA 793

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             +      SG S    +Y+ I+    +    K+ + +   ML  G   D  AY  LI  
Sbjct: 794 AEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 853

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                +L       + M++ G+ P+R T  SL+HG
Sbjct: 854 CCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/520 (23%), Positives = 236/520 (45%), Gaps = 6/520 (1%)

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           GF+  V V+  + + G  P++ T N+ L  L + N  E   + FR M  +G CP+  +F 
Sbjct: 166 GFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFT 224

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            VI  L    ++++++ +  +M  LGI   +  Y CII  LC+  +L+ A  L + M   
Sbjct: 225 NVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVK 284

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + P+  TY  LIN L +    D  N IL++MI  G  P   VF +++ G C++G  + +
Sbjct: 285 GVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGA 344

Query: 362 VNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRW 416
           +   +       +P +    +L++  C + +   A+  LE++    ++   D+    + W
Sbjct: 345 LKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHW 404

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+      A+     M+  +  P     +  V G CK   + +A  ++ ++  +     
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 464

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++ + L+ GLC   K+ EA  +   M + G  +   ++N LI G C   KV+   RLR 
Sbjct: 465 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 524

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G      TY  ++ GL  + +  D + +  +    G   ++  Y I+++   + N
Sbjct: 525 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 584

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +++D    FN ++   +  +      ++        +      +  + S   + + + Y+
Sbjct: 585 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 644

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            LI+G+   GL   A +L+D M  +G+VP+   +  L+G 
Sbjct: 645 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 239/546 (43%), Gaps = 40/546 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +M K GI PNV T N ++  L +  R+++A +   +M  KG  PN +T+  +I GLI
Sbjct: 242 LFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLI 301

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             +  D    IL EM   G    +  +  +I   C+   +E A+++  +M + ++ P  +
Sbjct: 302 KLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 361

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLT----------------------------- 339
           T   L+   C++ +++ A + LE+++  GL+                             
Sbjct: 362 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMM 421

Query: 340 ------PTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSPHNALLECCCNAGKF 389
                 P+D +   +V GLC+ GK  E+       LE          NAL+   C AGK 
Sbjct: 422 LSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKL 481

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  I+++M +R +  D  ++N  I   C   ++   + L   M    + PD  TY+  
Sbjct: 482 PEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFL 541

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G C +   +DA++++ +  A  L+ +  +Y  ++EG C+  +I +   +F  +     
Sbjct: 542 LRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKM 601

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
            L+S  +NI+I   C    V  A++L     S G     +TY+ ++ G+  +   +D   
Sbjct: 602 ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKH 661

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           ++ +M  EG   +V  Y  LI    +  ++      +  M+   + P++ T   ++ G  
Sbjct: 662 LIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYC 721

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               +   ++ + K+     V D   YN+L NG  K      A  + D M  +G   D  
Sbjct: 722 KLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEI 781

Query: 689 THGLLV 694
           T+  LV
Sbjct: 782 TYTTLV 787



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 148/625 (23%), Positives = 273/625 (43%), Gaps = 63/625 (10%)

Query: 130 VREALISLVFSFVNHYRVNGAMRVLVNMNSG-----GFKLSVDVF--------------- 169
           +  AL  L  S V  +    A  +L+++ S      GF  +VDVF               
Sbjct: 131 IANALFGLT-SVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTC 189

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N  L ++V+    F     V++ M + G  P+V +   ++  L +  ++E+A++ F +M 
Sbjct: 190 NFXLSSLVKANE-FEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKME 247

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K G  PN  T+  +I GL  N R+D++  +  +M   G+Q  L  Y  +I  L + N  +
Sbjct: 248 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 307

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +   +   M      P+ + +  LI+  C+   ++ A  I + MI   +TPT      ++
Sbjct: 308 KVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLM 367

Query: 350 RGLCEVGKFDESVNFLED--KCGYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRKIA 405
           +G C+  + + + N LE+    G    P N  +++   C   ++  A    + M  R   
Sbjct: 368 QGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFR 427

Query: 406 DCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
             D    + +  LC++ +  +A EL  R++         T +A + G C      +A R+
Sbjct: 428 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI 487

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
            +++  + L +D I+Y+ L+ G C   K+     +   M+K G      ++N L+ GLC 
Sbjct: 488 VKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCN 547

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD--- 581
           + K+D AI+L     +SG      TY  +M G  K  R +D+  +  ++L +   L+   
Sbjct: 548 VGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 607

Query: 582 ----VEAYC---------ILIQSMSEQNKLKDCALFFNV-------------------MV 609
               ++A+C          L+++M  +  L +CA + ++                   M 
Sbjct: 608 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 667

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G VP+     +L+ G     Q+    S   +++S +   +   Y ++I+G  K G   
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 727

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           +A+ LL  M   G VPD  T+ +L 
Sbjct: 728 KANNLLIKMKESGIVPDVVTYNVLT 752



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 205/470 (43%), Gaps = 13/470 (2%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           F +  D YCKM       GN+E    +   M+ +        L SL+  F    ++  A 
Sbjct: 328 FNNLIDGYCKM-------GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 380

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
             L  + S G  +  D    V+  + ++ R  + F F  K M+     P+   L  L+  
Sbjct: 381 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFT-KMMLSRNFRPSDLLLTMLVCG 439

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L +  +   A + + R+ +KG   +  T   +I GL    ++ ++  I+ EM + G+ ++
Sbjct: 440 LCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMD 499

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
              Y  +I   C E K+E   RL + M    + PD  TY  L+  LC   +LDDA  + +
Sbjct: 500 RITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWD 559

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAG 387
           +    GL      +  ++ G C+  + ++  N     L  K    +  +N +++  C  G
Sbjct: 560 EFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNG 619

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  +LE M  + I  +C +++  I  +C    +  A  L+  M     VP+   Y+
Sbjct: 620 NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 679

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           A + G CKL   + A   + ++ + ++  +  +Y+ +++G C++  + +A  +   M ++
Sbjct: 680 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES 739

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           G      ++N+L  G C    +D A ++     + G      TYT ++ G
Sbjct: 740 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 250/553 (45%), Gaps = 11/553 (1%)

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +++E+  A   P+V + + L+  L    + E+AL+    M  KGC PN  T+  ++  L
Sbjct: 30  LLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCL 89

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               + D+++ +L EM D G   ++  Y C+I  L +  +L EA  LF  MR    +PD 
Sbjct: 90  GKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDT 149

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            TY  LI  L +  R   A ++LE+M   G  P    +  ++ GL + G+  ++    ++
Sbjct: 150 FTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQE 209

Query: 368 KCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                  P +    AL++    AG+   A  +L++M +R +     ++N  I    +  +
Sbjct: 210 MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +AY LL  M  +   PD  TYS  + G  K    ++A +V +++  +    D+I+Y+ 
Sbjct: 270 LVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNT 329

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ GL +   + +A  +F  M   GC+    +++ LI  L    +V+ A  L     S G
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY  I+  L K  +  D   + ++M  +G + DV  Y   + S+    + K+  
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEAR 449

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  M ++GL+PD  T  +LL GL+   ++      + +L+      DS  ++  +  L
Sbjct: 450 KIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEIL 509

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFDSSSFPDS 717
              G   +A  LL     KG  P A+++  L+        V E  ++     +    PD 
Sbjct: 510 TSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDI 569

Query: 718 VS-DILAEGLGNT 729
           VS   L   LG T
Sbjct: 570 VSYSSLISALGQT 582



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 136/593 (22%), Positives = 244/593 (41%), Gaps = 54/593 (9%)

Query: 80  LKIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVEE-MEGLCQNMVKERYPNVREALIS 136
           LK  KW         T D  +Y  +I  LG AG  E  +E + +   K   PN+     +
Sbjct: 35  LKAAKW---------TPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLW-TYNT 84

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV       + + A+R+L  M   G    V  +N ++  + +  R  ++   ++ EM + 
Sbjct: 85  LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR-LSEAFTLFAEMRER 143

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS----- 251
           G VP+  T N L+  L +  R + A++    M + GC P+  T+  +I GL  +      
Sbjct: 144 GCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKA 203

Query: 252 ------------------------------RVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
                                         RVDD++ +L EM + G++  +  Y  +I  
Sbjct: 204 FKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAG 263

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
             +   L EA  L   M+     PD +TY  LI  L +  +LD+A  +L+ M   G  P 
Sbjct: 264 FGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPD 323

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
              +  ++ GL + G  +++    +      C      ++ L+     A +   A  + E
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFE 383

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M    I  D  ++   I  L +  ++  A  L   M    + PD  TY+AF+    +  
Sbjct: 384 EMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGG 443

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
            +++A ++F  +    L+ D  +Y  L+ GL + +++ +A  +   + + GC+  S  F+
Sbjct: 444 RFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFD 503

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
             +  L     VD+A  L   A S G     S+Y  ++  L K  R  +    L  +  +
Sbjct: 504 ECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQ 563

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           G   D+ +Y  LI ++ +  ++         M K GL     +  +L+  L D
Sbjct: 564 GGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQD 616



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 168/394 (42%), Gaps = 38/394 (9%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  L+N L +  + ++A  + E++     TP    +  ++  L   GK++ ++  
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN 420
           + +       P    +N L++C   AG+F                              +
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQF------------------------------D 96

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           E +R    LL  M  +  VPD  TY+  +    K     +A  +F ++  +  V D+ +Y
Sbjct: 97  EALR----LLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTY 152

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+ GL +V +  +A+E+   M ++GC     +++ LI GL    +  KA +L      
Sbjct: 153 NSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKR 212

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G    + T+T +M  L K  R  D L +L +M   G    V  Y  LI    +   L +
Sbjct: 213 RGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVE 272

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                + M + G  PD  T   L+ GL   SQL      + K+  +    D+  YN LIN
Sbjct: 273 AYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLIN 332

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL K GL + A  L D M  KG  PD  T+  L+
Sbjct: 333 GLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 141/330 (42%), Gaps = 15/330 (4%)

Query: 58  RHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           R+   PD      LI  L   + L  A ++ K +  +     T  TY  +I  LG AG +
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTI-TYNTLINGLGKAGLL 340

Query: 113 EEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
            +   L   M  K   P+V     +L+ +     RV  A  +   M S G  +  D+F  
Sbjct: 341 NDAGRLFDRMKSKGCNPDVV-TYSTLITALGKAARVESACVLFEEMESVG--IQPDLFTY 397

Query: 172 VLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
                V  K G  D    ++ EM   G+ P+V T N  L  L    R + A   F  M +
Sbjct: 398 CSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE-LSFYTCIIPMLCRENKLE 289
            G  P+  T++ ++ GL     VDD+  +L E+ + G   + L F  C + +L     ++
Sbjct: 458 SGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDEC-LEILTSWGNVD 516

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           EA  L +   +  L P   +Y  LI+ L +  R+ +A + LED+   G  P    +  ++
Sbjct: 517 EAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLI 576

Query: 350 RGLCEVGKFDESVNFLED--KCGYVTSPHN 377
             L + G+ D +   LE+  K G   SP +
Sbjct: 577 SALGQTGQIDTAFELLEEMSKRGLKLSPRS 606



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 1/259 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  LG A  VE    L + M             S++       +V+ A R+   M
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM 420

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G    V  +N  L ++    R F +   ++++M ++G++P+V T + LL  L +T  
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGR-FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A    + + ++GC  +S  F+  ++ L +   VD++  +L      G+    S Y  
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  L +  ++ EA    + ++     PD ++Y  LI+ L +  ++D A ++LE+M   G
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599

Query: 338 LTPTDDVFVDIVRGLCEVG 356
           L  +   + ++VR L + G
Sbjct: 600 LKLSPRSYSNLVRKLQDWG 618


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 153/674 (22%), Positives = 292/674 (43%), Gaps = 63/674 (9%)

Query: 49  DYEAKIQSLRHNLSPDHLIRVLD-NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLG 107
           +++  ++SL  +++P    +++   +N++   ++ FKWV  Q  + +  D   +++  L 
Sbjct: 55  EHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVL- 113

Query: 108 LAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA---MRVLVNMNSGGFKL 164
                         + ++ +   ++A++ L+    +    NG    M  L  M   GF+L
Sbjct: 114 --------------VSRDLFGVAQKAVVLLIQECEDSE--NGVVKLMGALDGMTELGFRL 157

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S   ++ +L  + +   GF  F+ VY+ MV  G V  +  ++Y                 
Sbjct: 158 SYPCYSTLLMCLAKLNMGFVAFL-VYRRMVNEGFV--LGGIDY----------------- 197

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
                        RT   V+  L  N  V  +     ++  LG  L+    T ++   CR
Sbjct: 198 -------------RT---VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCR 241

Query: 285 ENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
            + L EA R+F KM +  +  P+ +TY  LI+ LCE  RL++A  + ++M+  G  P+  
Sbjct: 242 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 301

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
            +  +++  C++G  D+++  L++       P    +  L++  C  GK   A  +  KM
Sbjct: 302 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 361

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               +     ++N  I   C+   +  A++LL  M   +  P+  TY+  + G C++   
Sbjct: 362 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 421

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
             A  + R+V    L+ D ++Y+ LV+G C+  ++  A  +F  M+  G      +F  L
Sbjct: 422 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 481

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I GLC + ++++A  +       G S    T+T ++ G  K+ +AKD+  +   M+   C
Sbjct: 482 IDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRC 541

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
                 +   + ++ +  KL +       M+K GLVP   T   L+ G     +  L   
Sbjct: 542 LTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 601

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            + ++       +   Y I+INGL   G   +A  +L  M   G  P+  T+ +LV + V
Sbjct: 602 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHV 661

Query: 699 GEEIDSRRFAFDSS 712
                 R F   S+
Sbjct: 662 KAGRLDRAFQIVST 675



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 144/618 (23%), Positives = 272/618 (44%), Gaps = 29/618 (4%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVRE 132
           +DL  A ++F+ +S ++  +  + TY  +I  L  AG +EE   L Q MV++   P+ R 
Sbjct: 243 DDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 302

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
             + L+ +  +    + AM++L  M +     +V  + +++  +  E +   +   V+++
Sbjct: 303 YTV-LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK-IEEANGVFRK 360

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+K G+ P + T N L+    +   + SA      M K  C PN RT+  +++GL   S+
Sbjct: 361 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 420

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              +  +L  + D G+  +   Y  ++   C+E +L  A  +F  M +  L PD  T+  
Sbjct: 421 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 480

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDK 368
           LI+ LC+  RL+ AN IL  M+  G++  +  F  ++ G C++GK  +      N +E++
Sbjct: 481 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
           C       N  L+      K   A  +L KM     +    +  I I   C   E   + 
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 600

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ++L RM  +   P+  TY+  + G C     E+A  +   +S+  +  +  +Y+ LV+  
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 660

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL--------RSLAY 539
            +  ++  A ++   M KNGC  +S  ++ L+ G  +      A  L        RSL+ 
Sbjct: 661 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 720

Query: 540 SSGTSY------------TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
               +             T   Y  +++GL K  R  +   +   M+  G   D +A   
Sbjct: 721 EENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISS 779

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I+   +  K  +C  F  +++    VP   +   ++HGL +  ++      ++ LV  +
Sbjct: 780 IIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHT 839

Query: 648 EVLDSSMYNILINGLWKE 665
            + +       I  L KE
Sbjct: 840 GIEEEVEVTPSIEFLMKE 857


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 160/653 (24%), Positives = 284/653 (43%), Gaps = 34/653 (5%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
           +L    +  SA+  F W   ++ F+HT  TY      L   G  EE       + KE++P
Sbjct: 63  ILHMVKNGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEE----AYRLFKEKWP 118

Query: 129 NVREALIS-------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
              + LI        L+    N  ++  A  +   M   G +  V     +L A+   K 
Sbjct: 119 ---QELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALC--KS 173

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           G  +    Y E  K   +P   T   L++ LF   R++ A   F  M K    PN+ T+ 
Sbjct: 174 GNLELALRYFE--KMSSIPCAATWTILIDGLFRAIRVDEACYYFEEM-KHTAIPNNWTYT 230

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           +VI GL+   +V ++  +L EM        L+ YT +I   C+   + +A  L + M+  
Sbjct: 231 VVINGLVKAGKVAEAERVLQEM----PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRK 286

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
               D LTY  LI+  C    +D A ++LE+M      P    +  ++ GLC   +  E+
Sbjct: 287 GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA 346

Query: 362 VNFL-----EDKCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIR 415
            + L     ED C      +N L++    A +   A +  LE +   +  D  +++  IR
Sbjct: 347 RDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIR 406

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC      +A+  L  MV   ++P    YS+ + G C+    + A  VF  + A     
Sbjct: 407 GLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQP 466

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +   Y+ L+ GLC+  ++ +A      M++ GCS    ++  LI GLC   + D+A  L 
Sbjct: 467 NLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY 526

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
             +   G   + ++   ++  L  L++A+ +L V+   L  G +     Y  +I+S+ ++
Sbjct: 527 VRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVV---LATGNSPTAFFYATVIESLCKE 583

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
           N L +       M+ AG+ PD  T+ +L+  +    +  +  + + ++V          Y
Sbjct: 584 NNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTY 643

Query: 656 NILINGLWKEGLTSQASYLLDLMLGK-GWVPDATTH-GLLVGSSVGEEIDSRR 706
           + L+N L+K G  S+A  +L  ++      PD   + GL+   S  ++++  R
Sbjct: 644 STLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEAR 696



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 143/586 (24%), Positives = 248/586 (42%), Gaps = 46/586 (7%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V  + R+  +M   G +LS  +  V+L  +   K G +  VF      +      V T N
Sbjct: 39  VESSSRLGFSMKWNG-QLSQRLVGVILHMV---KNGESAMVFFGWAGTRQDFRHTVHTYN 94

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
              E L  T + E A   F+    +   P+S T+ I+I+GL    ++  + S+  EM D 
Sbjct: 95  CFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDR 154

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +     ++  LC+   LE A+R F+ M ++   P   T+  LI+ L   +R+D+A
Sbjct: 155 GLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGLFRAIRVDEA 211

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
               E+M    + P +  +  ++ GL + GK  E+   L++      + + +++   C A
Sbjct: 212 CYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKA 270

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G    A  +LE M  +    D  ++N  I   C  +EI +AYELL  M  +  VPD  TY
Sbjct: 271 GDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTY 330

Query: 446 SAFVLGKC---KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
              + G C   +L    D L   R  +      + +SY+ L++G  +  ++ +A ++F  
Sbjct: 331 DILIAGLCRAKRLSEARDLLGTLR--NEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   G      +++ LI GLC   +  +A                  Y+ ++ GL +   
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGE 448

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
                 V   M+  GC  ++  Y  LI  + +  +L D  L    M + G  PD  T  +
Sbjct: 449 LDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGT 508

Query: 623 LLHGLADGSQ---------------LHLVSSGINKLVSDSEVLDSS-------------- 653
           L+ GL   S+               + +  +  N +++    L+ +              
Sbjct: 509 LIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSP 568

Query: 654 ---MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               Y  +I  L KE   ++A  LL+ M+G G  PD +T   LVG+
Sbjct: 569 TAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGA 614



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 126/592 (21%), Positives = 228/592 (38%), Gaps = 86/592 (14%)

Query: 24  ISSLSCANT--IPLSSETDMIKSHQTTDY--EAKIQSLRHNLSPDHLIRVLDNTNDLSSA 79
           +SS+ CA T  I +      I+  +   Y  E K  ++ +N +   +I  L     ++ A
Sbjct: 186 MSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEA 245

Query: 80  LKIFKWVSIQKRFQHTA--DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL 137
            ++ + + +     +T+    +CK       AG++ +   L ++M ++ Y        +L
Sbjct: 246 ERVLQEMPVPTLANYTSVIGGHCK-------AGDMGKAYHLLEDMKRKGYQGDNLTYNTL 298

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           +        ++ A  +L  M S  F   +  +++++  +   KR       +     +  
Sbjct: 299 IHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDD 358

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
             PNV + N L++   +  R+  A   F  M   G  P+  T+  +I+GL    R  ++ 
Sbjct: 359 CTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAH 418

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
           S L EM    I  ++  Y+ +I  LCR  +L+ A  +F  M A    P+   Y  LI  L
Sbjct: 419 SYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGL 478

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES-----------VNFLE 366
           C+  RL DA   +++M   G +P    +  ++ GLC   + DE+           +   E
Sbjct: 479 CKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISE 538

Query: 367 DKCGYV---------------------TSP----HNALLECCCNAGKFFLAKCILEKMAD 401
             C  V                      SP    +  ++E  C       A+ +LE M  
Sbjct: 539 TSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIG 598

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             I  D  + +  +  +C  ++   A   L  MV     P   TYS  +    K     +
Sbjct: 599 AGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSE 658

Query: 461 ALRVFRQ-VSAQSLVLDSISYSKLVEGLCQVEKITEA----------------------- 496
           A  V R+ +S  S   D + Y  L+      +++ EA                       
Sbjct: 659 AHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLL 718

Query: 497 ------------VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
                        E+   M +N   ++ ++FNILI G C + + D+A+R+ S
Sbjct: 719 KGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLS 770


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/579 (25%), Positives = 259/579 (44%), Gaps = 24/579 (4%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A ++L  M   G      ++N ++    + K     F F+  EMVK   +P V T   ++
Sbjct: 29  ARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL-AEMVKNHCLPTVVTYTNIV 87

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           + L +  R + A+     M  KGC PN  T+ ++++GL    ++D++  +L EM   G  
Sbjct: 88  DGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 147

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++  Y   I  LC+ ++++EA +    M    + PD ++Y  +IN LC++  LD A+ +
Sbjct: 148 PDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRM 204

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           L+ M   G TP    +  ++ G C+ G+ + ++  L+        P    +N+LL     
Sbjct: 205 LDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 264

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G    A+ +L +M  R    D  S+N  I  LC+ E ++KA  +  RMV     P+ ++
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC-CM 503
           YS  V   CK    +DA+ +  Q   +  ++D + Y+ L++GLC+  +  EA  +F   +
Sbjct: 325 YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVL 384

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            +  C      +N+++   C  R++DKA+++              T+  ++ GL    R 
Sbjct: 385 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRL 443

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            D   +L  M+ EG   D   Y  L+ +M +  K       F   VK G VPD  T  +L
Sbjct: 444 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 503

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           + GL   +          K       LD +++N +I G  + G       L   ++    
Sbjct: 504 ITGLVHENMAEEAYLLFTK-------LDVALWNAMILGYAENGSGDLGLKLFVELIESDV 556

Query: 684 VPDATTHGLLVGSSV--GEEIDSRRFAFDSSS----FPD 716
            P+A T G  +   +   E +   R  FD +     FPD
Sbjct: 557 EPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPD 595



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 231/515 (44%), Gaps = 43/515 (8%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  K C P++ TF I+++GL  +++++ +  +LG M ++G   + + Y  +I    +   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             +A +    M     +P  +TY  +++ LC+  R  DA  +L++M   G +P    +  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 348 IVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRK 403
           IV GLCE  K DE+   LE+    GY      +N+ ++  C   +   A+  L +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--V 178

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  S+   I  LC++ ++  A  +L +M      PD  TYS+ + G CK    E A+ 
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 464 VFR-----------------------------------QVSAQSLVLDSISYSKLVEGLC 488
           +                                     ++  +    D +SY+  ++GLC
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           + E++ +A  VF  M + GC+ ++SS+++L+  LC  +++D AI L   A          
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            YT ++ GL K  R  +   + +++L E  C  DV  Y +++ S  ++ ++         
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 418

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M++     +  T   L+HGL    +L    + +  +V +  + D   Y  L++ + K G 
Sbjct: 419 MLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           ++ A  L +  +  G VPD  T+  L+   V E +
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 512



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 4/306 (1%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++ I +R LC + ++ KA +LLGRM     VPD A Y+A + G  K  ++  A +  
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++     +   ++Y+ +V+GLC+  +  +AV++   M   GCS +  ++N+++ GLC  
Sbjct: 69  AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           RK+D+A ++       G      TY   + GL K  R  +    LA+M V     DV +Y
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSY 185

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             +I  + +   L   +   + M   G  PD  T  SL+ G   G ++      ++ ++ 
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDS 704
                +   YN L+  L + G   +A  +L  M  +G+ PD  ++   + G    E +  
Sbjct: 246 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 305

Query: 705 RRFAFD 710
            +  FD
Sbjct: 306 AKAVFD 311



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/414 (22%), Positives = 180/414 (43%), Gaps = 38/414 (9%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK--------------RGFADFVFVYK 191
           R   A+++L  M   G   ++  +NV++  + EE+              RG+   V  Y 
Sbjct: 95  RTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYN 154

Query: 192 EMVKA-----------------GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
             +K                   + P+V +   ++  L ++  ++SA     +M  +GC 
Sbjct: 155 SFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCT 214

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+  T+  +I G      V+ ++ +L  M  LG +  +  Y  ++  L R   + +A  +
Sbjct: 215 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 274

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M      PD ++Y   I+ LC+  R+  A  + + M+  G TP    +  +V  LC+
Sbjct: 275 LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCK 334

Query: 355 VGKFDESVNFLED-KCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKIADCDS- 409
             + D+++  +E  +  Y       +  LL+  C  G+F  A  +  K+ D KI + D  
Sbjct: 335 KKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394

Query: 410 -WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
            +N+ +   C+  +I KA ++  +M+  +   +  T++  V G C      DA  +   +
Sbjct: 395 FYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTM 453

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             +  + D ++Y  LV+ +C+  K   A+E+F    K GC     +++ LI GL
Sbjct: 454 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 507



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 143/319 (44%), Gaps = 37/319 (11%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMV 194
           SL+  F     V  AM +L +M   G + ++  +N +LGA+      G A+ + V  EM 
Sbjct: 222 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV--EME 279

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G  P+V + N  ++ L +  R++ A   F RM ++GC PN+ ++ ++++ L     +D
Sbjct: 280 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELD 339

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEEL 313
           D+++++ +  +    +++  YT ++  LC+  + +EA  LF K++      PD   Y  +
Sbjct: 340 DAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 399

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           ++  C+  ++D A  I + M                               LE  C  V 
Sbjct: 400 LDSHCKRRQIDKALQIHKQM-------------------------------LERNCCNVV 428

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGR 432
           +  N L+   C   +   A+ +L  M D   I D  ++   +  +C+  +   A EL   
Sbjct: 429 T-WNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEE 487

Query: 433 MVVSSVVPDCATYSAFVLG 451
            V    VPD  TYSA + G
Sbjct: 488 AVKGGCVPDVVTYSALITG 506


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 153/633 (24%), Positives = 286/633 (45%), Gaps = 51/633 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  +I      G++++       M+ +R  PNV     S++ +      V+ AM VL  
Sbjct: 90  SYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVV-TYNSIIAALCKAQTVDKAMEVLTT 148

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G       +N ++       +     VF+ K+M   G+ P+V T N L++ L +  
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL-KKMRSDGVEPDVVTYNSLMDYLCKNG 207

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R   A   F  M K+G  P   T+  +++G      + +   +L  M   GI      ++
Sbjct: 208 RCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 267

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++    ++ K+EEA+ +F  MR   L P+ +TY  +I  LC++ R++DA    E MI  
Sbjct: 268 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           GL+P + V+  ++ GLC   K++ +    +  L+      T   N++++  C  G+   +
Sbjct: 328 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 387

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + + + M    +  D  +++  I   C   ++ +A +LL  MV   + PDC TYS  + G
Sbjct: 388 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLING 447

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK+   +DAL +FR++ +  +  D I+Y+ +++GL Q  +   A E++  ++K+G  L 
Sbjct: 448 YCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLE 507

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLV 568
            S++NI+++GLC  +  D A+R+              T+  ++  L+K+ R   AKDL V
Sbjct: 508 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 567

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
             +     G   +   Y ++ +++  Q  L++    F  M   G                
Sbjct: 568 AFSS---NGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC--------------- 609

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
                                +DS M N ++  L + G  ++A   L ++  K +  +A+
Sbjct: 610 --------------------TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 649

Query: 689 THGLLVG-SSVGEEIDSRRFAFDS-SSFPDSVS 719
           T  L +   S G+  +  RF  +   SF +S+S
Sbjct: 650 TASLFIDLLSGGKYQEYHRFLPEKYKSFIESLS 682



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/566 (23%), Positives = 242/566 (42%), Gaps = 47/566 (8%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEI 242
           D   V+ E+++ GI P+V + N LL  L + NR + AL+    M   G  C P+  ++  
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE------------- 289
           VI G      +D + S   EM D  I   +  Y  II  LC+   ++             
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 290 ----------------------EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
                                 EAI   K MR+  + PD +TY  L++ LC+N R  +A 
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC- 383
            I + M   GL P    +  +++G    G   E    L+        P++   ++L C  
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273

Query: 384 CNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
               K   A  +  KM  + +  +  ++   I  LC++  +  A     +M+   + P  
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             Y++ + G C    +E A  +  ++  + + L++I ++ +++  C+  ++ E+ ++F  
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M + G      +++ LI G C+  K+D+A +L +   S G      TY+ ++ G  K+ R
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
            KD LV+  +M   G + D+  Y I++Q + +  +       +  + K+G   +  T   
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           +LHGL               L      L++  +NI+I+ L K G   +A  L       G
Sbjct: 514 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 573

Query: 683 WVPDATTHGLL----VGSSVGEEIDS 704
            VP+  T+ L+    +G  + EE+D 
Sbjct: 574 LVPNYWTYRLMAENIIGQGLLEELDQ 599


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 153/646 (23%), Positives = 288/646 (44%), Gaps = 44/646 (6%)

Query: 63  PDHLIRVLDN-TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           PD  +RVL +       AL++F+W   Q  F+ +   +C  IL++ LA N         N
Sbjct: 81  PDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCA-ILEI-LAQN---------N 129

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG---FKLSVDVFNVVLGAIVE 178
           +++  Y             +V    +N  M  +V++  GG    ++SV + ++++  +  
Sbjct: 130 LMRSAY-------------WVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLI-WVYS 175

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           +K      + V+ +M+K+ + P+V   N +L +L + + +  A++ +R M + G  P   
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  ++       +V   + +L EM   G       Y  +I  L ++ + E+A  L   M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               L     TY  LI        L +A  + E+M++ G +PT   +   + GLC++G+ 
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
            +++  L D       P    +N L+   C  G    A  + +++    +     ++N  
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +  LC   E+  A +L   M+   + PD  TY+  V G CK+ +   A   F ++  + L
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
            LDS +Y+  + G  ++   + A  +   M   G       +N+++ GLC +  +++A  
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 535

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L     S G      TYT I+   ++  R +    +  +ML +G    V  Y +LI   +
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
            + +L+   ++F+ M + G++P+  T  SL++GL    ++    +   ++V      +  
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655

Query: 654 MYNILIN-----GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            Y ILIN     G W+E L+     L   ML +G  PD+ TH  L+
Sbjct: 656 SYTILINENCNMGNWQEALS-----LYKQMLDRGVQPDSCTHSALL 696



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 120/525 (22%), Positives = 223/525 (42%), Gaps = 58/525 (11%)

Query: 208 LLEVLFETNRIESALDQFRR-----MHK------KGCCPNS---RTFEIVIKGLIANSRV 253
           +LE+L + N + SA     R     MH+       GC  +    +  +++I      S V
Sbjct: 121 ILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMV 180

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           +  +S+  +M    +  ++     I+ +L  ++ + +A+ +++ M    + P  +TY  L
Sbjct: 181 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGY 371
           ++  C+  ++    D+L +M   G  P D  +  ++ GL + G+F+++   + +  K G 
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 372 VTSPH--NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
             S +  N L+    N G                                   + +A  L
Sbjct: 301 KVSAYTYNPLIYGYFNKGM----------------------------------LAEALSL 326

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              MV+    P  ATY++F+ G CKL    DA++    + A +L+ D +SY+ L+ G C+
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           +  + +A  +F  +       +  ++N L+ GLC   +++ A +L+    + G +    T
Sbjct: 387 LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 446

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV-- 607
           YT ++ G  K+           +ML EG  LD  AY   I     + KL D +  F++  
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG---ELKLGDTSRAFSLQE 503

Query: 608 -MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M+  G  PD      ++ GL     L   S  + K+VSD  + D   Y  +I+   + G
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDS 711
              +   +   ML KG  P   T+ +L+    G+    R F + S
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFS 608



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 148/339 (43%), Gaps = 7/339 (2%)

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           + +KM   +++ D  + N  +R L + + + KA E+   M    + P   TY+  +   C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    +  L +  ++  +    + ++Y+ L+ GL +  +  +A  +   M K G  +S+ 
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LIYG      + +A+ L+      G S T +TY   + GL KL R  D +  L+ M
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           L      DV +Y  LI        L    L F+ +    L P   T  +LL GL    +L
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
            +      +++++    D   Y IL+NG  K G  S A    D ML +G   D+  +   
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485

Query: 694 VGSSVGEEIDSRRFAFD----SSSFPDS--VSDILAEGL 726
           +   +     SR F+      +  FP    + +++ +GL
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/477 (22%), Positives = 186/477 (38%), Gaps = 76/477 (15%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+ S+    +V   + +L  M   G   +   +NV++  +  +K  F     +  EM+K
Sbjct: 239 TLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL-SKKGEFEQAKGLIGEMLK 297

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+  +  T N L+   F    +  AL     M  KG  P   T+   I GL    R+ D
Sbjct: 298 TGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 357

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++  L +M    +  ++  Y  +I   CR   L +A  LF  +R++ L P  +TY  L++
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--------- 366
            LC    L+ A  +  +MI  G+ P    +  +V G C++G    +  F +         
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 477

Query: 367 DKCGYVT--------------------------SP----HNALLECCCNAGKFFLAKCIL 396
           D   Y T                           P    +N +++  C  G    A  +L
Sbjct: 478 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537

Query: 397 EKM-ADRKIADCDSWNIPIRWLCENEEIRKA----YELLGRMVVSSVV------------ 439
           +KM +D  I D  ++   I    EN  +RK     YE+L + +  SVV            
Sbjct: 538 QKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGK 597

Query: 440 -------------------PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
                              P+  TY++ + G CK+   + A   F ++  + +  +  SY
Sbjct: 598 GRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSY 657

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           + L+   C +    EA+ ++  M   G    S + + L+  L    K+    +L SL
Sbjct: 658 TILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESL 714



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 9/197 (4%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D  CK+       GN+EE   L Q MV +          S++ + + + R+     +   
Sbjct: 522 DGLCKL-------GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G   SV  + V++     + R    F++ + EM + GI+PNV T N L+  L +  
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY-FSEMQEKGILPNVITYNSLINGLCKVR 633

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R++ A + F  M +KG  PN  ++ I+I          +++S+  +M D G+Q +   ++
Sbjct: 634 RMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHS 693

Query: 277 CIIPMLCRENKLEEAIR 293
            ++  L ++ KL +A+R
Sbjct: 694 ALLKQLGKDCKL-QAVR 709


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 239/554 (43%), Gaps = 43/554 (7%)

Query: 150 AMRVLVNMNSG-GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
           A +V   M  G      V  + V++ A+       A FV +  E+ ++GI P V T N L
Sbjct: 199 ARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVML-AELERSGIQPTVVTYNVL 257

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L  + R+E A     RM +    P+  TF I+I GL    R  +  ++L EM   GI
Sbjct: 258 MDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGI 317

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
                 Y  +I   CRE    EA+RLF  M +  +    +TY  +   LC+   ++ A  
Sbjct: 318 TPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQ 377

Query: 329 ILEDMIVIGLT------------------------------------PTDDVFVDIVRGL 352
           IL++M++ G+T                                    P D V    ++ L
Sbjct: 378 ILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQEL 437

Query: 353 CEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
           C+ GK +E+       L    G   +  NAL+   C       A  +L+ M D  +  D 
Sbjct: 438 CKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDR 497

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++NI I++ C+  ++ +A +L   M+     PD  T++ F+   C L   ED L +  Q
Sbjct: 498 ITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQ 557

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           + ++ L  D ++Y  +++G C+ + + +A +    + KNG   ++  +N LI G      
Sbjct: 558 MKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGS 617

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  AI +      +G   T  TY  +M  +      ++   + AQ +++   L V  Y I
Sbjct: 618 ISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTI 677

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +IQ   +  K+ +  ++F  M    + P++ T  +L++               +++VS  
Sbjct: 678 IIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSG 737

Query: 648 EVLDSSMYNILING 661
            V D+  YN LI+G
Sbjct: 738 IVPDTVSYNTLISG 751



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/481 (22%), Positives = 224/481 (46%), Gaps = 7/481 (1%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL-GIQLELSFYTCII 279
           A D F  +  +G  P+ +T  I+++ L    ++D +  + GEM D   +  ++  YT +I
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LCR  +++ A  +   +    + P  +TY  L++ LC + R+++A  +   M+   L 
Sbjct: 224 KALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLR 283

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           P+   F  ++ GL    +F E    L++  G+  +P    +N L+   C  G    A  +
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRL 343

Query: 396 LEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            ++M  + I     ++N+  + LC+  E+  A ++L  M+++ +   C+ +++ V    +
Sbjct: 344 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLR 403

Query: 455 LCNYEDA-LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                D  LR+ R++ A+ L  +    +  ++ LC+  K  EA E++  +   G  ++ +
Sbjct: 404 GTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIA 463

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           + N LI+GLC    + +A ++      SG  +   TY  ++    K  + ++ + +   M
Sbjct: 464 TSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDM 523

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           +  G   D+  +   +++     K++D     + M   GL PD  T  +++ G      +
Sbjct: 524 IKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           H  +  + +L+ +    ++ +YN LI G  + G  S A  +LD M   G  P   T+  L
Sbjct: 584 HKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSL 643

Query: 694 V 694
           +
Sbjct: 644 M 644



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 14/303 (4%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L   N++  A K+ K + +    +    TY  MI     A  +EE   L  +M+K 
Sbjct: 468 LIHGLCQGNNMKEATKVLKAM-VDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKR 526

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            +        + + ++ N  +V   + +L  M S G K  +    V  G I++   G+  
Sbjct: 527 GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDI----VTYGTIID---GYCK 579

Query: 186 FVFVYK------EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
              V+K      E++K G+ PN    N L+        I  A+     M   G  P   T
Sbjct: 580 AKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPIT 639

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++  +     V+++  I  +     I+L +  YT II   C+  K++EA+  FK M 
Sbjct: 640 YNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMH 699

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
             D+ P+++TY  L+   C+    ++A  + ++M+  G+ P    +  ++ G CEV   D
Sbjct: 700 YRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLD 759

Query: 360 ESV 362
           + V
Sbjct: 760 KIV 762


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 240/507 (47%), Gaps = 32/507 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  +M+K G  P++ TL+ LL       RI  A+    +M + G  P++ TF  +I GL 
Sbjct: 138 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLF 197

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +++  ++V+++  M   G Q +L  Y  ++  LC+   ++ A+ L K M    +  + +
Sbjct: 198 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVV 257

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  +I+ LC+   +DDA D+   M   G+ P  DVF                       
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP--DVFT---------------------- 293

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
                  +N+L+ C CN G++  A  +L  M +RKI  +  ++N  I    +  ++ +A 
Sbjct: 294 -------YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L   M+  S+ P+  TY++ + G C     ++A ++F  + ++  + D ++Y+ L++G 
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+ +++ E +E+F  MS+ G   ++ ++N LI GL      D A ++     S G     
Sbjct: 407 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 466

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY+ ++ GL K  + +  LVV   +       ++  Y I+I+ M +  K++D    F  
Sbjct: 467 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCS 526

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   G+ P+     +++ G           +   ++  D  + DS  YN LI    ++G 
Sbjct: 527 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 586

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
            + ++ L+  M   G+V DA+T  +++
Sbjct: 587 KAASAELIKEMRSCGFVGDASTISMVI 613



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 222/486 (45%), Gaps = 6/486 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ VL  M   G++  +   + +L      KR  ++ V +  +MV+ G  P+  T N L+
Sbjct: 135 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR-ISEAVALVDQMVEMGYKPDTVTFNTLI 193

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             LF  N+   A+    RM  +GC P+  T+  V+ GL     +D ++S+L +M    I+
Sbjct: 194 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 253

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y  II  LC+   +++A  LF  M    + PD  TY  LI+CLC   R  DA+ +
Sbjct: 254 ANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRL 313

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           L DMI   + P    F  ++    + GK  E+    ++       P    +N+L+   C 
Sbjct: 314 LSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 373

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             +   A+ I   M  +  + D  ++N  I+  C+ + + +  EL   M    +V +  T
Sbjct: 374 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G  +  + + A ++F+++ +  +  D I+YS L++GLC+  K+ +A+ VF  + 
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           K+    +  ++NI+I G+C   KV+    L       G       YT ++ G  +    +
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           +   +  +M  +G   D   Y  LI++          A     M   G V D  T+  ++
Sbjct: 554 EADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613

Query: 625 HGLADG 630
           + L DG
Sbjct: 614 NMLHDG 619



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/522 (22%), Positives = 224/522 (42%), Gaps = 48/522 (9%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+  F  M K    P+   F  ++  +   ++ D  +S+  +M +LGI      Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++   CR ++L  A+ +   M  L   PD +T   L+N  C   R+ +A  +++ M+ +
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P    F  ++ GL    K  E+V  ++        P    +  ++   C  G   LA
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L+KM   KI A+   +N  I  LC+ + +  A++L  +M    + PD  TY++ +  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 452 KCKLCNYEDALRVF-----RQVSAQSLVLDS----------------------------- 477
            C    + DA R+      R+++   +  +S                             
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 478 -ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++Y+ L+ G C  +++ EA ++F  M    C     ++N LI G C  ++V++ + L  
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G    T TY  ++ GL +         +  +M+ +G   D+  Y IL+  + +  
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 480

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDS 652
           KL+   + F  + K+ + P+  T   ++ G+    ++     L  S   K V  + ++  
Sbjct: 481 KLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII-- 538

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             Y  +I+G  ++GL  +A  L   M   G +PD+  +  L+
Sbjct: 539 --YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 8/386 (2%)

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N L E L+LDDA  +  +M+     P+   F  ++  + ++ KFD  ++ L ++   +  
Sbjct: 55  NGLSE-LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS-LGEQMQNLGI 112

Query: 375 PHNA-----LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
           PHN      LL C C   +  LA  +L KM       D  + +  +   C  + I +A  
Sbjct: 113 PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 172

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L+ +MV     PD  T++  + G        +A+ +  ++ A+    D  +Y  +V GLC
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   I  A+ +   M K     +   +N +I GLC  + +D A  L +   + G      
Sbjct: 233 KRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  ++  L    R  D   +L+ M+      +V  +  LI + +++ KL +    F+ M
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           ++  + P+  T  SL++G     +L         +VS   + D   YN LI G  K    
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV 694
            +   L   M  +G V +  T+  L+
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLI 438



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 113/275 (41%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L G MV S   P    +S  +    K+  ++  + +  Q+    +  +  +YS L+ 
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  ++  A+ V   M K G      + + L+ G C  +++ +A+ L       G   
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            T T+  ++ GL    +A + + ++ +M+  GC  D+  Y  ++  + ++  +       
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M K  +  +     +++ GL     +       NK+ +     D   YN LI+ L   
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           G  S AS LL  M+ +   P+  T   L+ +   E
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 153/674 (22%), Positives = 292/674 (43%), Gaps = 63/674 (9%)

Query: 49  DYEAKIQSLRHNLSPDHLIRVLD-NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLG 107
           +++  ++SL  +++P    +++   +N++   ++ FKWV  Q  + +  D   +++  L 
Sbjct: 32  EHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVL- 90

Query: 108 LAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA---MRVLVNMNSGGFKL 164
                         + ++ +   ++A++ L+    +    NG    M  L  M   GF+L
Sbjct: 91  --------------VSRDLFGVAQKAVVLLIQECEDSE--NGVVKLMGALDGMTELGFRL 134

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S   ++ +L  + +   GF  F+ VY+ MV  G V  +  ++Y                 
Sbjct: 135 SYPCYSTLLMCLAKLNMGFVAFL-VYRRMVNEGFV--LGGIDY----------------- 174

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
                        RT   V+  L  N  V  +     ++  LG  L+    T ++   CR
Sbjct: 175 -------------RT---VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCR 218

Query: 285 ENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
            + L EA R+F KM +  +  P+ +TY  LI+ LCE  RL++A  + ++M+  G  P+  
Sbjct: 219 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 278

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
            +  +++  C++G  D+++  L++       P    +  L++  C  GK   A  +  KM
Sbjct: 279 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 338

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               +     ++N  I   C+   +  A++LL  M   +  P+  TY+  + G C++   
Sbjct: 339 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 398

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
             A  + R+V    L+ D ++Y+ LV+G C+  ++  A  +F  M+  G      +F  L
Sbjct: 399 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 458

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I GLC + ++++A  +       G S    T+T ++ G  K+ +AKD+  +   M+   C
Sbjct: 459 IDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRC 518

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
                 +   + ++ +  KL +       M+K GLVP   T   L+ G     +  L   
Sbjct: 519 LTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 578

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            + ++       +   Y I+INGL   G   +A  +L  M   G  P+  T+ +LV + V
Sbjct: 579 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHV 638

Query: 699 GEEIDSRRFAFDSS 712
                 R F   S+
Sbjct: 639 KAGRLDRAFQIVST 652



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 149/626 (23%), Positives = 282/626 (45%), Gaps = 29/626 (4%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVRE 132
           +DL  A ++F+ +S ++  +  + TY  +I  L  AG +EE   L Q MV++   P+ R 
Sbjct: 220 DDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 279

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
             + L+ +  +    + AM++L  M +     +V  + +++  +  E +   +   V+++
Sbjct: 280 YTV-LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK-IEEANGVFRK 337

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+K G+ P + T N L+    +   + SA      M K  C PN RT+  +++GL   S+
Sbjct: 338 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 397

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              +  +L  + D G+  +   Y  ++   C+E +L  A  +F  M +  L PD  T+  
Sbjct: 398 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 457

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDK 368
           LI+ LC+  RL+ AN IL  M+  G++  +  F  ++ G C++GK  +      N +E++
Sbjct: 458 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
           C       N  L+      K   A  +L KM     +    +  I I   C   E   + 
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 577

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ++L RM  +   P+  TY+  + G C     E+A  +   +S+  +  +  +Y+ LV+  
Sbjct: 578 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 637

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL--------RSLAY 539
            +  ++  A ++   M KNGC  +S  ++ L+ G  +      A  L        RSL+ 
Sbjct: 638 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 697

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE-AYCILIQSMSEQNKL 598
               +   S++   ++ +    + +D         ++ C +  E  Y  L+  + ++ ++
Sbjct: 698 EENDNNCLSSHVFRLMDVDHALKIRD--------EIKKCGVPTEDLYNFLVVGLCKEGRI 749

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS-SMYNI 657
            +       MVK GL PD+     + H        + +     KLV D++ + S + Y  
Sbjct: 750 IEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLE--FMKLVLDNKFVPSFASYCW 807

Query: 658 LINGLWKEGLTSQASYLL-DLMLGKG 682
           +I+GL  EG   +A  L+ DL+   G
Sbjct: 808 VIHGLRNEGRVQEAQKLVSDLVRHTG 833



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 222/541 (41%), Gaps = 67/541 (12%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN  T + L+  L E  R+E A    + M +KGC P++RT+ ++IK        D ++ +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM        +  YT +I  LCRE K+EEA  +F+ M    L P  +T+  LIN  C+
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 359

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---------NFLEDKCG 370
              +  A  +L  M      P    + +++ GLC V K  ++            L D+  
Sbjct: 360 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 419

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           Y     N L++  C  G+  +A  I   M    +  D  ++   I  LC+   + +A  +
Sbjct: 420 Y-----NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 474

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR----------------------- 466
           LG MV   +  D  T++A + G CK+   +D   +F                        
Sbjct: 475 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 534

Query: 467 ------------QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                       ++    LV   ++++ L+EG C+  +   ++++   M + GCS +  +
Sbjct: 535 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 594

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           + I+I GLC   +V++A  +     S G S    TY  ++   VK  R      +++ M+
Sbjct: 595 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 654

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP---------DRETMLSLLH 625
             GC  +   Y  L+        L + A+    +   G +          D   + S + 
Sbjct: 655 KNGCQPNSHIYSALLSGFV----LSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVF 710

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            L D      +   I K    +E     +YN L+ GL KEG   +A  L   M+  G  P
Sbjct: 711 RLMDVDHALKIRDEIKKCGVPTE----DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 766

Query: 686 D 686
           D
Sbjct: 767 D 767


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/583 (24%), Positives = 274/583 (46%), Gaps = 30/583 (5%)

Query: 110 GNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G++++  G    M+     PNV     S++ +      ++ AM VL +M   G   +   
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNV-VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N ++       +      F+ K+M   G+ P+V T N L++ L +  R   A   F  M
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFL-KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P   T+  +++G      + +   +L  M   GI      ++ +I    ++ K+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++A+ +F  MR   L PD +TY  +I  LC++ R++DA    E MI   L+P + V+  +
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 349 VRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  LC   K+D++    +  L+      T   N++++  C  G+   ++ + + M    +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  +++  I   C   ++ +A +LL  MV   + PDC TY+  + G CK+   EDAL 
Sbjct: 511 KPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +FR++ +  +  D I+Y+ +++GL Q  +   A E++  ++++G  L  S++NI+++GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLVVLAQMLVEGCAL 580
                D+A+R+      +     T T+  ++  L+K+ R   AKDL   L+     G   
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS---ANGLVP 687

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           DV  Y ++ +++ EQ  L++    F  M + G   +                  +++S +
Sbjct: 688 DVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS----------------RMLNSIV 731

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
            KL+   ++  +  Y  +I+        S AS  LDL+ G  +
Sbjct: 732 RKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 251/591 (42%), Gaps = 42/591 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +PNV + 
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N LL+ L + NR + AL+  + M   G  C P+  ++  VI G      +D +     EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLE---------------------------------- 289
            D GI   +  Y  II  LC+   ++                                  
Sbjct: 226 LDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 290 -EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EAI   K M +  + PD +TY  L++ LC+N R  +A  + + M   GL P    +  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRKI 404
           ++G    G   E    L+        P++   ++L C     GK   A  +  KM  + +
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++   I  LC++  +  A     +M+   + P    Y++ +   C    ++ A  
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  + + LD+I ++ +++  C+  ++ E+ ++F  M + G   +  +++ LI G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYC 525

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
           +  K+D+A +L +   S G      TY  ++ G  K+ R +D LV+  +M   G + D+ 
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y I++Q + +  +       +  + ++G   +  T   +LHGL   +           L
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 L++  +NI+I  L K G   +A  L   +   G VPD  T+ L+ 
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 150/637 (23%), Positives = 279/637 (43%), Gaps = 48/637 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFAD 185
           PNV    I L+    +  R   A+ +L  M   G     DV  +  V+    +E  G  D
Sbjct: 160 PNVFSYNI-LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE--GDLD 216

Query: 186 FVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
             +  Y EM+  GI+PNV T N ++  L +   ++ A++    M K G  PN RT+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G  ++ +  +++  L +M   G++ ++  Y  ++  LC+  +  EA ++F  M    L 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF------------VD----- 347
           P+  TY  L+        L + + +L+ M+  G+ P   VF            VD     
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 348 ------------------IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
                             ++  LC+ G+ ++++ + E       SP    +N+L+   C 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             K+  AK ++ +M DR I  D   +N  I   C+   + ++ +L   MV   V P+  T
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIIT 516

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YS  + G C     ++A ++   + +  +  D ++Y+ L+ G C++ ++ +A+ +F  M 
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G S    ++NI++ GL   R+   A  L      SGT    STY  I+ GL K     
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + L +   + +    L+   + I+I ++ +  +  +    F  +   GLVPD  T   + 
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 696

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
             L +   L  +      +  +    +S M N ++  L + G  ++A   L ++  K + 
Sbjct: 697 ENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756

Query: 685 PDATTHGLLVG-SSVGEEIDSRRFAFDS-SSFPDSVS 719
            +A+T  L +   S G+  +  RF  +   SF +S+S
Sbjct: 757 LEASTASLFLDLLSGGKYQEYHRFLPEKYKSFIESLS 793



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 230/517 (44%), Gaps = 39/517 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     PN  T+ 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G +++   +T ++  LC + +  +A+ +  + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIVRGLCEVGKF 358
           L  +P+  +Y  L+  LC+  R  +A ++L+ M   G     DV  +  ++ G  + G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           D++                                    +M DR I  +  ++N  I  L
Sbjct: 216 DKAYG-------------------------------TYHEMLDRGILPNVVTYNSIIAAL 244

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+ + + KA E+L  MV + V+P+C TY++ V G C     ++A+   +++ +  +  D 
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L++ LC+  + TEA ++F  M+K G     +++  L+ G      + +   L  L
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              +G       ++ ++    K  +    ++V ++M  +G   D   Y  +I  + +  +
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++D   +F  M+   L P      SL+H L    +       I +++     LD+  +N 
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+   KEG   ++  L DLM+  G  P+  T+  L+
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLI 521


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 247/536 (46%), Gaps = 33/536 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +I + K+ +     +  +M   GI P+V TLN L+      NR   A     ++
Sbjct: 70  FNRLLTSIAKTKQ-YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKI 128

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I+GL    ++ D++ +  +M   G Q  +  Y  +I  LC+    
Sbjct: 129 LKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 188

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  PD + Y  +I+ LC++ ++ +A ++   M+  G++P  D+F   
Sbjct: 189 NAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP--DIFT-- 244

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                      + +L+   CN  ++     +L +M + KI  D 
Sbjct: 245 ---------------------------YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDV 277

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
             ++  +  LC+  +I +A++++  M++  V P+  TY+A + G C     ++A++VF  
Sbjct: 278 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 337

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +       + ISY+ L+ G C+++++ +A  +F  M +     ++ ++N L++GLC + +
Sbjct: 338 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGR 397

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  AI L     + G     +TY  ++  L K     + + +L  +       D++ Y I
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I  M    +L+     F+ +   GL P+  T   +++GL     L   +    ++  + 
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
              D   YN +  GL +     +A  LL  ML +G+  D +T  LLV     +++D
Sbjct: 518 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLD 573



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 228/514 (44%), Gaps = 16/514 (3%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F RM      P++  F  ++  +    +     S+  +M   GI  ++   
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C  N+   A  +   +  L L PD  T+  LI  LC   ++ DA  + + MI 
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG  + ++  L    +  C      + ++++  C   +   
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  KM  + I+ D  ++   I  LC   E +    LL +M+ S ++PD   +S  V 
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  V   +  + +  + ++Y+ L++G C   ++ EAV+VF  M  NG + 
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  S+N LI G C ++++DKA  L            T TY  +M GL  + R +D + + 
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D+  Y IL+  + +++ L +       +  + + PD +    ++ G+   
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S     +   Y I+INGL + GL  +A+ L   M G G  PD  T+
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525

Query: 691 -----GLLVGS------SVGEEIDSRRFAFDSSS 713
                GLL          + +E+ +R F+ D S+
Sbjct: 526 NTITQGLLQNKEALRAIQLLQEMLARGFSADVST 559



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+  MV  G  PNV + N L+    +  R++ A   F  M +K   PN+ T+  ++ G
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+ D++++  EM   G   +L+ Y  ++  LC+++ L+EA+ L K +   ++ PD
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 451

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
              Y  +I+ +C    L+ A DI  ++   GL P    +  ++ GLC  G  DE+     
Sbjct: 452 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 511

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           +  G   SP    +N + +      +   A  +L++M  R   AD  +  + +  LC+++
Sbjct: 512 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDK 571

Query: 422 EIRKAYELLGRMV 434
             +   ++L   V
Sbjct: 572 LDQSVKQILSEFV 584


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 149/683 (21%), Positives = 305/683 (44%), Gaps = 24/683 (3%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + S   +LSP  +I++L +  +  SAL IF  V+    + HT   +  ++ +L     V 
Sbjct: 1   MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVV 172
            +  + + +  ++     +  ++++ ++  +   + A+ +   M+   G +  +  +N +
Sbjct: 61  HVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 120

Query: 173 LGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           L A++E  K   A+  F+Y E +  G+ PN+ T N L+++     + + A +    M ++
Sbjct: 121 LNALIESNKWDEAESFFLYFETM--GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQ 178

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+  ++  +I  L  N  + D++ +  EM + G+  +++ Y  +I    ++  +  A
Sbjct: 179 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 238

Query: 292 IRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
             ++ ++++   + P+  +Y  +IN LC+  + D++ +I   M           +  ++ 
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 298

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC-----ILEKMAD 401
           GLC  G  D +    ++      SP    +N +L     AG+  + +C     ++EK   
Sbjct: 299 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR--IEECLELWKVMEKEGC 356

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           R +    S+NI IR L EN ++ +A  +   +       D  TY   V G CK      A
Sbjct: 357 RTVV---SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           L +  +       LD+ +YS ++ GLC+  ++ E   V   M+K+GC  +    N +I G
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                K++ A+R      S G   T  TY  ++ GL K +R  +   ++ +ML +G   +
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  Y +L+  + +  KL      +   ++ G  PD +    ++HGL    ++       +
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGLLVGS 696
           ++     V +   +N L+ G +K     +AS + D +L  G  PD      T  GL    
Sbjct: 594 EMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCH 653

Query: 697 SVGEEIDSRRFAFDSSSFPDSVS 719
            + + +     A D    P +++
Sbjct: 654 RISDAVGFLNDAVDRGVLPTAIT 676



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/413 (22%), Positives = 173/413 (41%), Gaps = 37/413 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT---FEIVIK 245
           VYKEM + G+ P+V   N +L       RIE  L+ ++ M K+GC    RT   + I+I+
Sbjct: 312 VYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC----RTVVSYNILIR 367

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           GL  N++VD+++SI   + +     +   Y  ++  LC+   L +A+ + +         
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D   Y  +IN LC   RLD+   +L+ M   G  P   V   ++ G     K ++++ F 
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRK 425
                                G      C    +         ++N  I  L + E   +
Sbjct: 488 ---------------------GNMVSKGCFPTVV---------TYNTLINGLSKAERFSE 517

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AY L+  M+     P+  TYS  + G C+    + AL ++ Q   +    D   ++ ++ 
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC   K+ +A++++  M +  C  +  + N L+ G   +R  ++A ++       G   
Sbjct: 578 GLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQP 637

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              +Y   + GL    R  D +  L   +  G       + IL++++ +   L
Sbjct: 638 DIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 117/328 (35%), Gaps = 81/328 (24%)

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           SY+ L+  L +  K  EA   F      G S +  ++NILI   C  ++ DKA  L +  
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 175

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ--- 595
           +  G S    +Y  ++  L K     D L +  +M   G   DV  Y ILI    ++   
Sbjct: 176 WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 235

Query: 596 ---------------------------NKLKDCALF------FNVMVKAGLVPDRETMLS 622
                                      N L  C  F      ++ M K     D  T  +
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING------------LW----KEG 666
           L+HGL     L   +    ++  +    D  +YN ++NG            LW    KEG
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 667 LTSQASY------------------LLDLMLGKGWVPDATTHGLLVGS-----------S 697
             +  SY                  + +L+  K    D+ T+G+LV             S
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 698 VGEEIDSRRFAFDSSSFPDSVSDILAEG 725
           + EE ++ R   D+ ++   ++ +  EG
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREG 443


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/594 (23%), Positives = 265/594 (44%), Gaps = 39/594 (6%)

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
           + +L  AG+V+ ++   Q M         +AL++ + +F      + A++     +  G 
Sbjct: 58  VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117

Query: 163 K-LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           +   V V+N +L A++ E       V VY  M KAG+ PNV T N L+  L + +R+++A
Sbjct: 118 RDPGVRVYNHLLDALLRENM-VGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAA 176

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
                 M +KGC P+  +   ++ G+    RV+++   L E     + ++ S Y  ++  
Sbjct: 177 RKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET----VPVQAS-YNAVVHA 231

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC E ++ E   +   M    L P+ +TY  +++  C+   L  A  IL  M+ +G TP 
Sbjct: 232 LCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 291

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              F  +V+G  E GK                  H+AL               +   M D
Sbjct: 292 VLTFTALVKGFFEDGKV-----------------HDAL--------------SMWHWMVD 320

Query: 402 RKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
              A    S+N+ IR LC   +++ A +    M  ++++P+  TYS  V G     + + 
Sbjct: 321 EGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDG 380

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ ++ ++ +     + + Y+ +++ LC+     +A  +   M  + C  ++ +FN LI 
Sbjct: 381 AMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIG 440

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC   +V +A+ +      +G      TY +++ GL +    KD   ++ +ML  G  L
Sbjct: 441 RLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFEL 500

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            +  Y  +I  + +    K   L    M+  G+ PD  T  +++H      ++ + +  +
Sbjct: 501 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 560

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++ + +   +   Y ILI+ L  +G  S A   L  ML +G  P+  T  +LV
Sbjct: 561 GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 167/386 (43%), Gaps = 17/386 (4%)

Query: 322 RLDDANDI------LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV-NFLEDKCGYVTS 374
           RL  A D+      L++M + G+  T+D  V  +      G  D ++  F          
Sbjct: 60  RLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 119

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           P    +N LL+             + + M    +  +  ++N+ IR LC+N+ +  A ++
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M      PD  ++   V G CKL   E+A    R   A+++ + + SY+ +V  LC 
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA----RGFLAETVPVQA-SYNAVVHALCG 234

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             ++ E   V   M + G   +  ++  ++   C  R++  A  + +   S G +    T
Sbjct: 235 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 294

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           +T ++ G  +  +  D L +   M+ EG A    +Y +LI+ +     LK    FFN M 
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 354

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           +  L+P+  T  +L+ G ++   L       N++ S     +  +Y  +I+ L K+ +  
Sbjct: 355 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 414

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVG 695
           QA  L+D ML     P+  T   L+G
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIG 440



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 105/264 (39%), Gaps = 18/264 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKR--------FQHTADTYCKMILKLGLAGNVEEMEG 117
           L+    N  DL  A+ I  W  ++          + +  D  CK ++        ++ E 
Sbjct: 368 LVDGFSNAGDLDGAMLI--WNEMKSSGCKPNVVVYTNMIDVLCKKMM-------FDQAES 418

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           L   M+ +  P       +L+    +  RV  A+ V   M   G   +   +N +L  + 
Sbjct: 419 LIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLF 478

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E      F  V  EM+  G   ++ T N ++  L +    + A+    RM  +G  P++
Sbjct: 479 REGNHKDAFAMVI-EMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 537

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +I       +V  +  +LG+M  +     +  YT +I  LC + KL  A+     
Sbjct: 538 FTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLK 597

Query: 298 MRALDLMPDELTYEELINCLCENL 321
           M    + P+E T+  L+  +  N+
Sbjct: 598 MLYEGICPNEATWNVLVRAIFTNI 621


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 149/643 (23%), Positives = 295/643 (45%), Gaps = 11/643 (1%)

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
           +LSP H++++L +  +  +A  +F   +    + H+A  Y  ++ +L     V  +  + 
Sbjct: 7   SLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV 66

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVVLGAIVE 178
           + +  +      +  +S++ ++  +   + A+ V   M    G + ++  +N +L A VE
Sbjct: 67  ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126

Query: 179 EKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            K+    + +F Y E   AG+ PN+ T N L+++  +    E A      M K+G  P+ 
Sbjct: 127 AKQWVKVESLFAYFET--AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-K 296
            ++  VI  L    ++DD++ +  EM + G+  +++ Y  +I    +E   + A+ L+ +
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           ++    + P+  T+  +I+ L +  R+DD   I E M           +  ++ GLC+ G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304

Query: 357 KFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
             D++ +      E K       +N +L   C  GK   +  +   M  +   +  S+NI
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI 364

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I+ L EN +I +A  +   M       D  TY  F+ G C       AL V ++V +  
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA- 531
             LD  +Y+ +++ LC+ +++ EA  +   MSK+G  L+S   N LI GL    ++ +A 
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             LR +   +G   T  +Y  ++ GL K  +  +    + +ML  G   D++ Y IL+  
Sbjct: 485 FFLREMG-KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +    K+      ++  +++GL  D      L+HGL    +L    + +  +   +   +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              YN L+ G +K G +++A+ +   M   G  PD  ++  ++
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 202/461 (43%), Gaps = 32/461 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+  MI  L   G V++   + + M +           SL+    +   V+ A  V   +
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           +     + V  +N +LG      +   + + +++ M     V N+ + N L++ L E  +
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGK-IKESLELWRIMEHKNSV-NIVSYNILIKGLLENGK 374

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I+ A   +R M  KG   +  T+ I I GL  N  V+ ++ ++ E+   G  L++  Y  
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II  LC++ +LEEA  L K M    +  +      LI  L  + RL +A+  L +M   G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
             PT   +  ++ GLC+ GKF E+  F+++           +LE   N  K         
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKE-----------MLE---NGWK--------- 531

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                   D  +++I +  LC + +I  A EL  + + S +  D   ++  + G C +  
Sbjct: 532 -------PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            +DA+ V   +  ++   + ++Y+ L+EG  +V     A  ++  M K G      S+N 
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           ++ GLC+ R V  A+     A + G   T  T+  ++  +V
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 157/664 (23%), Positives = 284/664 (42%), Gaps = 73/664 (10%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           ++S      E +++ L  +L P  +  VL    D   AL+ F W   Q R++H    Y  
Sbjct: 80  LRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYA 139

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+  L      +  + + + M K R     EA   ++ S+    ++  AMRVL  M    
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQ--- 196

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
                                            KAGI P++   N  + VL   NR++ A
Sbjct: 197 ---------------------------------KAGIEPDLSICNTAIHVLVMGNRLDKA 223

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +    RM      PN  T+  +IKG     R++D++ ++ EM   G   +   Y  ++  
Sbjct: 224 VRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGF 283

Query: 282 LCRENKLEEAIRLF--KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
           LC+E +++E +RL   KM++  +L+PD++TY   ++ L ++   D+A + L +       
Sbjct: 284 LCKEKRIKE-VRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA------ 336

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
                               E   F  DK GY     +A++   C  G+   AK I+ +M
Sbjct: 337 --------------------EERRFRVDKVGY-----SAIVHSFCREGRMDKAKEIVNEM 371

Query: 400 ADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             +  I D  ++   I  LC+  ++ +A ++L +M      P+  +Y+A + G CK  N 
Sbjct: 372 FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 431

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +A  +         + ++I+YS L+ G  +  K +EA ++   M K G   +    N+L
Sbjct: 432 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I  LC   KVD+A R      ++G +     +T ++ G  +    +  L +L  M +   
Sbjct: 492 IQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK 551

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y  +I ++ ++ ++++       M++ GL+P   T  +++H      ++  +  
Sbjct: 552 HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLK 611

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            + K++S  E    + YN +I  L   G   QA  LL  +L      DA T  +L+ S +
Sbjct: 612 LLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYL 669

Query: 699 GEEI 702
            + I
Sbjct: 670 SKGI 673


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 159/670 (23%), Positives = 296/670 (44%), Gaps = 61/670 (9%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWV-SIQKRF--QHTADTYCKMILKLGLAGNVEEMEG 117
           L P+HL  +L  T  +    +++ +  SI K    +++   +        L G + +   
Sbjct: 48  LEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNF--------LFGVLMDTYP 99

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           LC +      P V + LI +   ++    V  A+    +M   GFK SV   N+++ ++V
Sbjct: 100 LCSS-----NPAVFDLLIRV---YLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMV 151

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           +  R    + F +K+M+ + + PNV + N L+ VL    +++ A++    M + G  P  
Sbjct: 152 KNCRAHLVWXF-FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            ++  ++       R   ++ ++  M   GIQ ++  Y   I  LCR ++  +   + K 
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           MR   + P+E++Y  LIN   +  ++  A  +  +MI + L+P    +  ++ G C  G 
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330

Query: 358 FDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNI 412
           F+E++  L+        P+      LL     + KF +A+ ILE+ + +R   +C S  +
Sbjct: 331 FEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTV 390

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC N  + +A++LL  M    V PD  T+S  + G CK+ N   A  V  ++  + 
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREG 450

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            V +++ +S L+   C+V  + E ++ +  M+ NG +  + + N L+  LC   K+ +A 
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510

Query: 533 RL-----------RSLAY------------------------SSGTSYTTSTYTKIMLGL 557
                         S+ +                        S G   +  TY  ++  L
Sbjct: 511 EFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVL 570

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K Q   +   +L ++     A+D  +Y  LI  +S+   L +    F  M++  ++PD 
Sbjct: 571 CKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDS 630

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLD 676
            T   +L GL    +L      + +L+    + L+S +Y   I+GL+K G +  A YL  
Sbjct: 631 YTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFK 690

Query: 677 LMLGKGWVPD 686
            M  KG   D
Sbjct: 691 EMEEKGLSLD 700



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 227/535 (42%), Gaps = 48/535 (8%)

Query: 169 FNVVLGAIVEE-KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +N ++   V+E K G A  VF   EM++  + PN+ T N L+         E AL     
Sbjct: 283 YNTLINGFVKEGKIGVATRVF--NEMIELNLSPNLITYNILINGYCINGNFEEALRLLDV 340

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M      PN  T   ++ GL  +++ D + +IL         L    +T +I  LCR   
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGL 400

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA +L   M    + PD +T+  LIN  C+   L+ A +++  +   G  P + +F  
Sbjct: 401 LDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 348 IVRGLCEVG------KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
           ++   C+VG      KF  ++N         T   N+L+   C  GK   A+  L  ++ 
Sbjct: 461 LIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTC--NSLVASLCENGKLVEAEEFLHHISR 518

Query: 402 RK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
              + +  +++  I       +   A+ +  +M+     P   TY + +   CK  N+ +
Sbjct: 519 IGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWE 578

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A ++ +++    L +D+ISY+ L+  + +   + EAV +F  M +N     S ++  ++ 
Sbjct: 579 ARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638

Query: 521 GLCVM-RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           GL    R V   I L  L      +  +  YT  + GL K  ++K  L +  +M  +G +
Sbjct: 639 GLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLS 698

Query: 580 LDVEA-----------------------------------YCILIQSMSEQNKLKDCALF 604
           LD+ A                                   + IL+   S    +  C   
Sbjct: 699 LDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKL 758

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +N+M ++G  P+R T  SL+ GL +   L L    +   +++S  +D   +N+LI
Sbjct: 759 YNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLI 813



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/549 (22%), Positives = 220/549 (40%), Gaps = 65/549 (11%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V  +  M+  G  P+V T N ++  + +  R       F++M     CPN  +F I+I  
Sbjct: 125 VNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISV 184

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    ++  +V+IL  M   G    +  Y  ++   C++ + + A+ L   M    +  D
Sbjct: 185 LCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQAD 244

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY   I+ LC N R      +L+ M    +TP +  +  ++ G  +           E
Sbjct: 245 VCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVK-----------E 293

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
            K G  T   N ++E   +                    +  ++NI I   C N    +A
Sbjct: 294 GKIGVATRVFNEMIELNLSP-------------------NLITYNILINGYCINGNFEEA 334

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             LL  M  + V P+  T    + G  K   ++ A  +  + S     L+ IS++ +++G
Sbjct: 335 LRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDG 394

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+   + EA ++   M K+G      +F++LI G C +  ++KA  + S  Y  G    
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPN 454

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              ++ ++    K+    + +   A M + G   D      L+ S+ E  KL +   F +
Sbjct: 455 NVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLH 514

Query: 607 VMVKAGLVPDRETMLSLLHGLAD--------------------------GSQLHLVSSGI 640
            + + GLVP+  T   +++G A+                          GS L ++  G 
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQ 574

Query: 641 N---------KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           N         KL      +D+  YN LI  + K G   +A  L + M+    +PD+ T+ 
Sbjct: 575 NFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYT 634

Query: 692 LLVGSSVGE 700
            ++   + E
Sbjct: 635 CILSGLIRE 643



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 206/472 (43%), Gaps = 15/472 (3%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEE 290
           C  N   F+++I+  +    V  +V+    M   G   + S YTC  I+  + +  +   
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG--FKPSVYTCNMIMASMVKNCRAHL 158

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
               FK M    + P+  ++  LI+ LC   +L  A +IL  M   G  PT   +  ++ 
Sbjct: 159 VWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLS 218

Query: 351 GLCEVGKFDESVNFLED-KCGYVTS---PHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
             C+ G+F  ++  +   +C  + +    +N  ++  C   +      +L+KM ++ I  
Sbjct: 219 WCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP 278

Query: 407 CD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
            + S+N  I    +  +I  A  +   M+  ++ P+  TY+  + G C   N+E+ALR+ 
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLL 338

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
             + A  +  + ++   L+ GL +  K   A  +    S N  SL+  S  ++I GLC  
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRN 398

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDV 582
             +D+A +L       G      T++ ++ G  K   L +AK+   V++++  EG   + 
Sbjct: 399 GLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKE---VMSKIYREGFVPNN 455

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             +  LI +  +   + +   F+  M   G   D  T  SL+  L +  +L      ++ 
Sbjct: 456 VIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHH 515

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +     V +S  ++ +ING    G  S A  + D M+  G  P   T+G L+
Sbjct: 516 ISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLL 567



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 110/558 (19%), Positives = 222/558 (39%), Gaps = 71/558 (12%)

Query: 204  TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
            T N L+  L E  ++  A +    + + G  PNS TF+ +I G         + S+  +M
Sbjct: 492  TCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKM 551

Query: 264  FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
               G       Y  ++ +LC+     EA +L K +  + L  D ++Y  LI  + ++  L
Sbjct: 552  ISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNL 611

Query: 324  DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---------------- 367
             +A  + E+MI   + P    +  I+ GL   G+   +  FL                  
Sbjct: 612  LEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTC 671

Query: 368  ------KCGYVTSPH------------------NALLECCCNAGKFFLAKCILEKMADRK 403
                  K G   +                    N++ +     GK F A  ++ K  ++ 
Sbjct: 672  FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKN 731

Query: 404  -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
             I +  ++NI +      ++I   ++L   M  S   P+  TY + +LG C     E  +
Sbjct: 732  VIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGI 791

Query: 463  RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            ++ +   A+S  +D ++++ L+   C++  + + +++              + N+ ++ +
Sbjct: 792  KMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDL--------------THNMEVFRV 837

Query: 523  CVMRKVDKAI------RLRSLAY--------SSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             + +   KA+      R+ S  Y          G   T+  Y  +M  + ++   +    
Sbjct: 838  SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFK 897

Query: 569  VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            +  QM+  G +LD  A C +++ ++   K+++       M++   +P   T  +L+H   
Sbjct: 898  LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFC 957

Query: 629  DGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                    +  +  L+    V LD   YN+LI+     G    A    + +  KG +P+ 
Sbjct: 958  KKDNFK-EAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNM 1016

Query: 688  TTHGLLVGSSVGEEIDSR 705
            TT+ +LV +   +   SR
Sbjct: 1017 TTYRVLVSAISTKHYVSR 1034



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 102/467 (21%), Positives = 186/467 (39%), Gaps = 46/467 (9%)

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + +  +I +  R+  +  A+  F  M      P   T   ++  + +N R        + 
Sbjct: 106 AVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQ 165

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAGK 388
           M+   + P    F  ++  LC  GK  ++VN L   ++ GYV +   +N LL  CC  G+
Sbjct: 166 MLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGR 225

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           F  A  ++  M  + I AD  ++N+ I  LC N    + Y +L +M    + P       
Sbjct: 226 FKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP------- 278

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
                                       + +SY+ L+ G  +  KI  A  VF  M +  
Sbjct: 279 ----------------------------NEVSYNTLINGFVKEGKIGVATRVFNEMIELN 310

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            S +  ++NILI G C+    ++A+RL  +  ++       T   ++ GL K  +     
Sbjct: 311 LSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVAR 370

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L +  +   +L+  ++ ++I  +     L +       M K G+ PD  T   L++G 
Sbjct: 371 NILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGF 430

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                L+     ++K+  +  V ++ +++ LI    K G   +       M   G   D 
Sbjct: 431 CKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADN 490

Query: 688 TTHGLLVGS--SVGEEIDSRRFAFDSSSF---PDSVS-DILAEGLGN 728
            T   LV S    G+ +++  F    S     P+SV+ D +  G  N
Sbjct: 491 FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 211/504 (41%), Gaps = 24/504 (4%)

Query: 149  GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP-NVDTLNY 207
            GA  V   M S G   S   +  +L  + + +    +F    K + K   +P  VDT++Y
Sbjct: 543  GAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQ----NFWEARKLLKKLHCIPLAVDTISY 598

Query: 208  ---LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
               ++E+    N +E A+  F  M +    P+S T+  ++ GLI   R+  +   LG + 
Sbjct: 599  NTLIVEISKSGNLLE-AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 265  DLGI-QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
               I  L    YTC I  L +  + + A+ LFK M    L  D +    + +      ++
Sbjct: 658  QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717

Query: 324  DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF--LEDKCGYVTS--PHNAL 379
              A+ ++       + P    F  ++ G               L  + G+  +   +++L
Sbjct: 718  FSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSL 777

Query: 380  LECCCNAGKFFLAKCILEK-MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
            +   CN G   L   +L+  +A+    D  ++N+ IR  CE  ++ K  +L   M V  V
Sbjct: 778  ILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRV 837

Query: 439  VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
              D  T  A      +    ++      ++  +  +  S  Y  +++ +C+V  I  A +
Sbjct: 838  SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFK 897

Query: 499  VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
            +   M   G SL  ++   ++ GL +  K+++A+ +           TTST+T +M    
Sbjct: 898  LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFC 957

Query: 559  K---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            K    + A +L +++    V+   LD+ AY +LI +      +     F+  + + GL+P
Sbjct: 958  KKDNFKEAHNLKILMEHYRVK---LDIVAYNVLISACCANGDVITALDFYEEIKQKGLLP 1014

Query: 616  DRETMLSLLHGLADGSQLHLVSSG 639
            +  T   L+  +   S  H VS G
Sbjct: 1015 NMTTYRVLVSAI---STKHYVSRG 1035


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 145/606 (23%), Positives = 261/606 (43%), Gaps = 47/606 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +PNV + 
Sbjct: 102 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSY 161

Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           N LL+ L + NR + AL+    M      G  P+  ++  VI G       D + S   E
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLE--------------------------------- 289
           M D GI  ++  Y  II  LC+   ++                                 
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 290 --EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             EAI   K MR+  + PD +TY  L++ LC+N R  +A  I + M   GL P    +  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRK 403
           +++G    G   E    L+        P +   ++L C   N GK   A  +  KM  + 
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG 401

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  +  ++   I  LC++  +  A     +M+   + P    Y++ + G C    +E A 
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++  + + L++I ++ +++  C+  ++ E+ ++F  M + G   +  ++N LI G 
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C+  K+D+A++L S   S G    T TY+ ++ G  K+ R +D LV+  +M   G + D+
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y I++Q + +  +       +  + ++G   +  T   +LHGL               
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL----VGSSV 698
           L      L++  +NI+I+ L K G   +A  L       G VP+  T+ L+    +G  +
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701

Query: 699 GEEIDS 704
            EE+D 
Sbjct: 702 LEELDQ 707



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/518 (22%), Positives = 233/518 (44%), Gaps = 40/518 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     P+  T+ 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADV-ARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G +++   +T ++  LC + +  +A+ +  + M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMI--VIGLTPTDDV-FVDIVRGLCEVGK 357
           L  +P+  +Y  L+  LC+  R  +A ++L  M     G +P D V +  ++ G  + G 
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            D+                               A     +M DR I  D  ++N  I  
Sbjct: 212 SDK-------------------------------AYSTYHEMLDRGILPDVVTYNSIIAA 240

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+ + + KA E+L  MV + V+PDC TY++ + G C     ++A+   +++ +  +  D
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++YS L++ LC+  +  EA ++F  M+K G     +++  L+ G      + +   L  
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           L   +G       ++ ++       +    ++V ++M  +G   +   Y  +I  + +  
Sbjct: 361 LMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +++D  L+F  M+  GL P      SL+HGL   ++       I +++     L++  +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I+   KEG   ++  L +LM+  G  P+  T+  L+
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/458 (21%), Positives = 205/458 (44%), Gaps = 42/458 (9%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           A KIF  ++ ++  +    TY  ++      G + EM GL   MV+            L+
Sbjct: 320 ARKIFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
            ++ N  +V+ AM                                     V+ +M + G+
Sbjct: 379 CAYANQGKVDQAM------------------------------------LVFSKMRQQGL 402

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PN  T   ++ +L ++ R+E A+  F +M  +G  P +  +  +I GL   ++ + +  
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           ++ EM D GI L   F+  II   C+E ++ E+ +LF++M  + + P+ +TY  LIN  C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
              ++D+A  +L  M+ +GL P    +  ++ G C++ + ++++   ++      SP   
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRM 433
            +N +L+      +   AK +  ++ +     +  ++NI +  LC+N+    A ++   +
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
            +  +  +  T++  +    K+   ++A  +F   S+  LV +  +Y  + E +     +
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            E  ++F  M  NGC++ S   N ++  L    ++ +A
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/513 (21%), Positives = 213/513 (41%), Gaps = 41/513 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++ +      ++ AM VL  M   G       +N +L       +      F+ K+M  
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL-KKMRS 294

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+V T + L++ L +  R   A   F  M K+G  P   T+  +++G      + +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
              +L  M   GI  +   ++ +I     + K+++A+ +F  MR   L P+ +TY  +I 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD---------------- 359
            LC++ R++DA    E MI  GL+P + V+  ++ GLC   K++                
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 360 -------------------ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
                              ES    E        P    +N L+   C AGK   A  +L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             M    +  +  +++  I   C+   +  A  L   M  S V PD  TY+  + G  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
                A  ++ +++     ++  +Y+ ++ GLC+ +   +A+++F  +      L + +F
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           NI+I  L  + + D+A  L     S+G      TY  +   ++     ++L  +   M  
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            GC +D      +++ + ++ ++     + +++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 263/552 (47%), Gaps = 10/552 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           AM +   M       +V V+NV++G + +EKR   D   ++ EM    +VPN  T N L+
Sbjct: 85  AMELFETMKRRKVVPNVFVYNVLIGGLCKEKR-IRDAEKLFGEMSVRNLVPNRVTFNTLI 143

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +   +   ++ A+    RM K+   P+  TF  ++ GL    R++++  +L E+   G  
Sbjct: 144 DGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFV 203

Query: 270 LELSFYTCIIPMLCR-ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            +   Y+ I   L + ++    A+ L++      +  D  T   L+N LC+  +++ A +
Sbjct: 204 PDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEE 263

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCC 384
           +L+ ++  GL P + ++  IV G C++G  D ++  +E        P+    N++++  C
Sbjct: 264 VLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFC 323

Query: 385 NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                  A+  ++KM  + IA   +++NI I          + +++L  M  +   P+  
Sbjct: 324 EMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVI 383

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           +Y + +   CK     +A  V R +  + ++ ++  Y+ L++G C V K+ EA+  F  M
Sbjct: 384 SYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM 443

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           SKNG   +  ++N LI GLC M K+ +A  +  L  S+G      TY  ++ G      +
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN-KLKDCALFFNVMVKAGLVPDRETMLS 622
           +  L +   M   G    +  +  LI   S++  KLK+    FN M++  L PDR    +
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNA 561

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           ++H   +   +    S   ++V      D+  YN LI G  KEG  S+   L+D M  KG
Sbjct: 562 MIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKG 621

Query: 683 WVPDATTHGLLV 694
            +P+A T+ LL+
Sbjct: 622 LIPEADTYSLLI 633



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 211/493 (42%), Gaps = 6/493 (1%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           LL V  E+       + +  M ++G  P+     ++++ L+ + + D+ + +  EM  LG
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
            + +   Y   +    +   L+ A+ LF+ M+   ++P+   Y  LI  LC+  R+ DA 
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECC 383
            +  +M V  L P    F  ++ G C+ G+ D ++   E        P     N+LL   
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGL 181

Query: 384 CNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEE-IRKAYELLGRMVVSSVVPD 441
           C A +   A+C+L ++  +  + D  +++I    L ++++    A +L    +   V  D
Sbjct: 182 CKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKID 241

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T S  + G CK    E A  V + +    LV   + Y+ +V G CQ+  +  A+    
Sbjct: 242 NYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIE 301

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M   G   +  +FN +I   C M+ +DKA          G + +  TY  ++ G  +L 
Sbjct: 302 QMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLC 361

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
                  +L +M   G   +V +Y  LI  + +  K+ +  +    MV  G++P+     
Sbjct: 362 VFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYN 421

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            L+ G     +L       +++  +        YN LI GL K G   +A  +  L+   
Sbjct: 422 MLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITST 481

Query: 682 GWVPDATTHGLLV 694
           G  PD  T+  L+
Sbjct: 482 GHCPDVITYNSLI 494



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 127/605 (20%), Positives = 246/605 (40%), Gaps = 27/605 (4%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQK------RFQHTADTYCKMILKLGLAGNVEEMEGLC 119
           LI  L     +  A K+F  +S++        F    D YCK       AG V+   GL 
Sbjct: 107 LIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCK-------AGEVDVAIGLR 159

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           + M KE+         SL+       R+  A  +L  +   GF      ++++   +++ 
Sbjct: 160 ERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKS 219

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
             G    + +Y+E +  G+  +  T + LL  L +  ++E A +  + + + G  P    
Sbjct: 220 DDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVI 279

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++ G      +D ++  + +M   G++     +  +I   C    +++A    K M 
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + P   TY  LI+             ILE+M   G  P    +  ++  LC+ GK  
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKIL 399

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E+   L D  G    P    +N L++  C  GK   A    ++M+   I A   ++N  I
Sbjct: 400 EAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLI 459

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           + LC+  ++++A E+   +  +   PD  TY++ + G     N +  L ++  +    L 
Sbjct: 460 KGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLK 519

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
               ++  L+ G C  E I     +F  M +   S     +N +I+       V KA  L
Sbjct: 520 PTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSL 578

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           +      G      TY  ++LG +K  +  +   ++  M  +G   + + Y +LIQ   +
Sbjct: 579 QKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCD 638

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH--------LVSSGINKLVSD 646
                   +++  M++ G +P+      L  GL    +L         ++++G++ L ++
Sbjct: 639 LKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMDNLDTN 698

Query: 647 SEVLD 651
            ++ D
Sbjct: 699 EDLSD 703


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 5/439 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D + ++  MV +  +P++     LL V+ + NR +  +  F +M   G  P   T  I
Sbjct: 64  FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           V+  +  +S+   +   LG+M  LG + +L  +T ++   C  N++E+AI LF  +  + 
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ +TY  LI CLC+N  L+ A ++   M   G  P    +  +V GLCE+G++ ++ 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             L D       P+     AL++     GK   AK +   M    +  D  ++   I  L
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C    + +A ++   M  +   P+   Y+  + G CK    ED +++F ++S + +V ++
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           I+Y+ L++G C V +   A EVF  MS         ++N+L+ GLC   KV+KA+ +   
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
                      TYT I+ G+ KL + +D   +   +  +G   +V  Y  +I     +  
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483

Query: 598 LKDCALFFNVMVKAGLVPD 616
           + +    F  M + G +P+
Sbjct: 484 IHEADSLFKKMKEDGFLPN 502



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/456 (20%), Positives = 192/456 (42%), Gaps = 30/456 (6%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++  +++  + N + +D++ +   M        +  +T ++ ++ + N+ +  I LF+ M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           + L + P   T   +++C+C + +   A+  L  M+ +G  P    F  ++ G C   + 
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
           ++++   +   G    P                              +  ++   IR LC
Sbjct: 170 EDAIALFDQILGMGFKP------------------------------NVVTYTTLIRCLC 199

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +N  +  A EL  +M  +   P+  TY+A V G C++  + DA  + R +  + +  + I
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +++ L++   +V K+ EA E++  M +        ++  LI GLC+   +D+A ++  L 
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +G       YT ++ G  K +R +D + +  +M  +G   +   Y +LIQ      + 
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                 FN M      PD  T   LL GL    ++         +      ++   Y I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           I G+ K G    A  L   +  KG  P+  T+  ++
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 122/259 (47%), Gaps = 3/259 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYR 146
           +++R +    T+  +I      G + E + L   M++   YP+V     SL+     +  
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV-FTYGSLINGLCMYGL 308

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++ A ++   M   G   +  ++  ++    + KR   D + ++ EM + G+V N  T  
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR-VEDGMKIFYEMSQKGVVANTITYT 367

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++      R + A + F +M  +   P+ RT+ +++ GL  N +V+ ++ I   M   
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            + + +  YT II  +C+  K+E+A  LF  + +  + P+ +TY  +I+  C    + +A
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487

Query: 327 NDILEDMIVIGLTPTDDVF 345
           + + + M   G  P + V+
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 5/228 (2%)

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNH 144
           V IQ        TY  +I  L + G ++E   +   M +   YPN      +L+  F   
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN-EVIYTTLIHGFCKS 341

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVD 203
            RV   M++   M+  G   +   + V++ G  +  +   A  VF   +M      P++ 
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF--NQMSSRRAPPDIR 399

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N LL+ L    ++E AL  F  M K+    N  T+ I+I+G+    +V+D+  +   +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           F  G++  +  YT +I   CR   + EA  LFK M+    +P+E  Y+
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 257/536 (47%), Gaps = 8/536 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L A+ +  + F   + + ++M   GI  ++ T +  +      +++  AL  
Sbjct: 82  SIVEFNKLLSAVAKMNK-FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  P+  T   ++ G   + R+ D+V+++ +M ++G + +   +T +I  L  
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA+ L   M      PD +TY  ++N LC+   +D A  +L+ M    +     +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           +  I+ GLC+    D+++N   +       P    +++L+ C CN G++  A  +L  M 
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           +RKI  +  +++  I    +  ++ +A +L   M+  S+ PD  TYS+ + G C     +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A  +F  + ++    + ++YS L++G C+ +++ E +E+F  MS+ G   ++ ++  LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           +G    R  D A  +     S G      TY  ++ GL K  +    +VV   +      
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500

Query: 580 LDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
            D+  Y I+I+ M +  K++D   LF N+ +K G+ P+     +++ G           S
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADS 559

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            + K+  D  + +S  YN LI    ++G    ++ L+  M   G+  DA+T GL+ 
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 140/605 (23%), Positives = 260/605 (42%), Gaps = 82/605 (13%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           +R FA     Y+E+++          N L +++    +++ A+D F  M K    P+   
Sbjct: 40  ERSFASASGDYREILR----------NRLSDII----KVDDAVDLFGDMVKSRPFPSIVE 85

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F  ++  +   ++ +  +S+  +M  LGI  +L  Y+  I   CR ++L  A+ +   M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            L   PD +T   L+N  C + R+ DA  +++ M+ +G  P    F  ++ GL    K  
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E+V  ++        P    +  ++   C  G   LA  +L+KM   KI AD   +N  I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR----------- 463
             LC+ + +  A  L   M    + PD  TYS+ +   C    + DA R           
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 464 ------------------------VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
                                   ++ ++  +S+  D  +YS L+ G C  +++ EA  +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M    C  +  +++ LI G C  ++V++ + L       G    T TYT ++ G  +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            +   +  +V  QM+  G   ++  Y IL+  + +  KL    + F  + ++ + PD  T
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505

Query: 620 MLSLLHGL------ADGSQL--HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
              ++ G+       DG +L  +L   G++  V          YN +I+G  ++G   +A
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV--------IAYNTMISGFCRKGSKEEA 557

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGE-----------EIDSRRFAFDSSSFPDSVSD 720
             LL  M   G +P++ T+  L+ + + +           E+ S  FA D+S+    V++
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTN 616

Query: 721 ILAEG 725
           +L +G
Sbjct: 617 MLHDG 621



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 2/229 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I     A  VEE   L + M +           +L+  F      + A  V   M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            S G   ++  +N++L  + +  +  A  + V++ + ++ + P++ T N ++E + +  +
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGK-LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +E   + F  +  KG  PN   +  +I G       +++ S+L +M + G       Y  
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           +I    R+   E +  L K MR+     D  T   + N L +  RLD +
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG-RLDKS 626


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 163/677 (24%), Positives = 284/677 (41%), Gaps = 67/677 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +IL      N++   G+   MVKE          +L+    N  RV+ A+ +L  M
Sbjct: 277 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G + +V  + + + A+   +        V + M K G  PNV T   L+  L    +
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR-MKKRGCRPNVQTYTALISGLSRLGK 395

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +E A+  + +M K+G  PN+ T+  +I  L    R   ++ I   M   G       Y  
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II  LC    +E+A+ LF+ M  +  +P  +TY  LIN       +++A  +L+ M   G
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFLAK 393
             P +  + ++V G  + GK + +  + ++  +CG   +P  +  L++     GK  +A 
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +LE+M +     + +S+N  I  L +     +A ++  +M    ++P+  TY+  + G 
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+    + A ++F  +  +  + +  +YS L+ GLCQ  K  EA  +   M + G +   
Sbjct: 636 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 695

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK------------- 559
            +F  LI G  V+ ++D A  L       G      TY+ ++ GL K             
Sbjct: 696 VTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH 755

Query: 560 ------LQRAKDLLV-----VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
                     KD+       +LA+M   GC   ++ Y  L+  +  + +  +       M
Sbjct: 756 EAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 815

Query: 609 VKAGLVPDRETMLSLL----------HGL-------ADGSQLHL---------------- 635
            + G  PDRE   SLL          H L       A G QLHL                
Sbjct: 816 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 875

Query: 636 --VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
               +  + ++      D  ++ +L++GL KEG       LL +M  K + P+  T+ +L
Sbjct: 876 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935

Query: 694 VG--SSVGEEIDSRRFA 708
               S +G+ I+S   A
Sbjct: 936 GRELSRIGKSIESEPLA 952



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 152/641 (23%), Positives = 273/641 (42%), Gaps = 26/641 (4%)

Query: 52  AKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----- 106
           ++++ L   L   H+  ++    D  S ++ F W+S +  ++H  + +  M+ +L     
Sbjct: 106 SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV 165

Query: 107 -GLAGNVE-EMEGLCQNMVK-ERYPNVREALISLVFSF------------VNHYRVNGAM 151
              A ++   M   C+N  +  R  +    +  + F F                 V GA 
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            +   M + G + S+  FN ++  I+ +K    +   +  ++ +  + P+V T   L+  
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLIN-ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 284

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
                 ++ A   F RM K+GC PNS T+  +I GL    RVD+++ +L EM + GI+  
Sbjct: 285 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPT 344

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  YT  I  LC     EEAI L   M+     P+  TY  LI+ L    +L+ A  +  
Sbjct: 345 VYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYH 404

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV----TSPHNALLECCCNAG 387
            M+  GL P    +  ++  LC  G+F  ++       G+     T  +N +++  C  G
Sbjct: 405 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG 464

Query: 388 KFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  + EKM     +    ++N  I        +  A  LL  M  +   PD  TY+
Sbjct: 465 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 524

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             V G  K    E A   F+++    L  + +SY+ L++G  +  K+  A+ +   M + 
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           GC+ +  S+N +I GL    +  +A ++       G      TYT ++ GL +  R +  
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             +   M    C  ++  Y  LI  + ++ K  +  +    M + GL PD  T  SL+ G
Sbjct: 645 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 704

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
                ++      + ++V      +   Y++L+ GL KE L
Sbjct: 705 FVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECL 745



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 209/442 (47%), Gaps = 30/442 (6%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V+ + ++  +M + GIQ  L  +  +I +L ++ K+ EA  +   +   DL PD  TY  
Sbjct: 221 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 280

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI   C N  LD A  + + M+  G  P    +  ++ GLC  G+ DE+++ LE+     
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE----- 335

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                                 ++EK  +  +    ++ +PI  LC  E   +A EL+ R
Sbjct: 336 ----------------------MIEKGIEPTVY---TYTLPITALCAIEHEEEAIELVAR 370

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M      P+  TY+A + G  +L   E A+ ++ ++  + LV ++++Y+ L+  LC   +
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
            + A+++F  M  +G   ++ ++N +I GLC+   ++KA+ L       G   T  TY  
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G +      +   +L  M   GC  D   Y  L+   S+  KL+  + +F  MV+ G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L P+  +  +L+ G +   ++ +  S + ++       +   YN +INGL KE   S+A 
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            + D M  +G +P+  T+  L+
Sbjct: 611 KICDKMAEQGLLPNVITYTTLI 632



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 222/517 (42%), Gaps = 47/517 (9%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
            S+ALKIF W+       +T  TY ++I  L L G++E+   L + M+K           
Sbjct: 431 FSTALKIFHWMEGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 489

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  ++    VN A R+L  M   G +     +N ++    +  +      F ++EMV+
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK-LESASFYFQEMVE 548

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PN  +   L++   +  +++ AL    RM + GC PN  ++  VI GL   +R  +
Sbjct: 549 CGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSE 608

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCR------------------------------- 284
           +  I  +M + G+   +  YT +I  LCR                               
Sbjct: 609 AEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 668

Query: 285 ----ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
               E K +EA  L K M    L PDE+T+  LI+      R+D A  +L  M+ +G  P
Sbjct: 669 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKP 728

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
               +  +++GL +     E    ++ +  Y  SPH   +        F +   +L +M+
Sbjct: 729 NYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDV-------NFEIVSNLLARMS 781

Query: 401 DRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           +       D+++  +  LC      +A +L+  M      PD   Y + ++  CK    +
Sbjct: 782 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVD 841

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            AL++F  + A+   L    Y  L+  LC+  ++ EA  +F  M +   +     + +L+
Sbjct: 842 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            GL    ++D  ++L  +  S   ++T +  T ++LG
Sbjct: 902 DGLLKEGELDLCMKLLHIMESK--NFTPNIQTYVILG 936



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 144/303 (47%), Gaps = 1/303 (0%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  L +  ++R+A  +L ++    + PD  TY++ +LG C+  N + A  VF ++
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    +S++YS L+ GLC   ++ EA+++   M + G   +  ++ + I  LC +   
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++AI L +     G      TYT ++ GL +L + +  + +  +ML EG   +   Y  L
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  +    +       F+ M   G + + +T   ++ GL  G  +        K++    
Sbjct: 422 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRF 707
           +     YN LING   +G  + A+ LLDLM   G  PD  T+  LV G S   +++S  F
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541

Query: 708 AFD 710
            F 
Sbjct: 542 YFQ 544



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 130/278 (46%)

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           L + E +  A  L  +M+ S + P   T++  +    K     +A  +  Q+    L  D
Sbjct: 215 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 274

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +Y+ L+ G C+   +  A  VF  M K GC  +S +++ LI GLC   +VD+A+ +  
Sbjct: 275 VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 334

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G   T  TYT  +  L  ++  ++ + ++A+M   GC  +V+ Y  LI  +S   
Sbjct: 335 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           KL+     ++ M+K GLVP+  T  +L++ L  G +        + +     + ++  YN
Sbjct: 395 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 454

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I GL   G   +A  L + ML  G +P   T+  L+
Sbjct: 455 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 492



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 145/350 (41%), Gaps = 24/350 (6%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQH 94
           LS E    ++ +  D  A+   L + ++   LI  L        A KIF  +  +K   +
Sbjct: 600 LSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPN 659

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
              TY  +I  L   G  +E E L + M ++          SL+  FV   R++ A  +L
Sbjct: 660 LY-TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 718

Query: 155 VNMNSGGFKLSVDVFNVVLGAI------VEEK---RGFADFVFVYKE------------- 192
             M   G K +   ++V+L  +      +EEK   +  A + F   E             
Sbjct: 719 RRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLA 778

Query: 193 -MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            M + G  P +DT + L+  L    R   A    + M ++G CP+   +  ++     N 
Sbjct: 779 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 838

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            VD ++ I   +   G QL LS Y  +I  LC+  ++EEA  LF  M   +   DE+ + 
Sbjct: 839 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWT 898

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            L++ L +   LD    +L  M     TP    +V + R L  +GK  ES
Sbjct: 899 VLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 242/527 (45%), Gaps = 41/527 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +LG++V+ K  +   + + K+M   GIVP++ TL+ L+       ++  +     ++
Sbjct: 13  FGKILGSLVKMKH-YPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKI 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  PN+     ++KGL     V  S+    ++   G Q++   Y  ++  LC+  + 
Sbjct: 72  LKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGET 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI+L + +      PD + Y  +I+ LC++  +D+A D+  +M   G+ P    +  +
Sbjct: 132 RCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTL 191

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C  G+  E+   L +      +P    +N L++  C  GK   +K +L  M  + +
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D   ++I +   C   E++KA ++   MV + V PD  +Y+  + G CK    ++A+ 
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMN 311

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           + R++  ++++ D+++YS L++GLC++ +IT  +++   M   G   +  ++N L+ GLC
Sbjct: 312 LLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLC 371

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             + +DKAI L       G      TYT ++ GL K  R K    +   +LV+G  +DV 
Sbjct: 372 KNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVW 431

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y ++I  + ++    +     + M   G +P+  T                        
Sbjct: 432 TYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVT------------------------ 467

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
                      + I+I  L ++    +A  LL  M+ KG +P    H
Sbjct: 468 -----------FEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFH 503



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 203/460 (44%), Gaps = 42/460 (9%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           I+  L +       I L K M A  ++PD +T   LINC C   ++  +  +L  ++ +G
Sbjct: 16  ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC---GYVTS--PHNALLECCCNAGKFFLA 392
             P   +   +++GLC  G+  +S++F  DK    G+      +  LL   C  G+   A
Sbjct: 76  YQPNTIILNTLMKGLCLKGEVKKSLHF-HDKVVAQGFQMDQVSYGILLNGLCKIGETRCA 134

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L  + DR    D   ++  I  LC+++ + +AY+L   M    + PD  TY+  + G
Sbjct: 135 IKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICG 194

Query: 452 KCKLCNYEDALRVFRQV-----------------------------------SAQSLVLD 476
            C      +A  +  ++                                   + + +  D
Sbjct: 195 FCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPD 254

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            + YS L++G C V ++ +A ++F  M + G +    S+NI+I GLC  ++VD+A+ L  
Sbjct: 255 VVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLR 314

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                     T TY+ ++ GL KL R   +L +  +M   G   ++  Y  L+  + +  
Sbjct: 315 EMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQ 374

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            L      F  M + G+ P++ T  +L+ GL  G +L    +    L+     +D   Y 
Sbjct: 375 NLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYT 434

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           ++I+GL KEG+  +A  +   M   G +P+A T  +++ S
Sbjct: 435 VMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRS 474



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 39/347 (11%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    LAG + E  GL   M+ K   PN+     +L+ +     +V  +  +L  
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIY-TYNTLIDTLCKEGKVKESKNLLAV 245

Query: 157 MNSGGFKLSVDVFNVVLGA--IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           M   G K  V ++++++    +V E +       V   MV+ G+ P+V + N ++  L +
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLV---MVQTGVNPDVYSYNIIINGLCK 302

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             R++ A++  R M  K   P++ T+  +I GL    R+   + +  EM   G    L  
Sbjct: 303 GKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVT 362

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++  LC+   L++AI LF  M+   + P++ TY  LI+ LC+  RL     + + ++
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLL 422

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
           V G       +  ++ GLC+ G FDE++                                
Sbjct: 423 VKGYCIDVWTYTVMISGLCKEGMFDEAL-------------------------------A 451

Query: 395 ILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
           +  KM D   I +  ++ I IR L E +E  KA +LL  M+   ++P
Sbjct: 452 MKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 6/300 (2%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M++   +P    +   +    K+ +Y   + + +Q+ A+ +V D ++ S L+   C + +
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           +  +  V   + K G   ++   N L+ GLC+  +V K++       + G      +Y  
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL K+   +  + +L  +       DV  Y  +I  + +   + +    ++ M   G
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           + PD  T  +L+ G     QL      +N+++  +   +   YN LI+ L KEG   ++ 
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 673 YLLDLMLGKGWVPDATTHGLLVGSS--VGEEIDSRRFAF---DSSSFPDSVS-DILAEGL 726
            LL +M  KG  PD   + +L+     VGE   +++       +   PD  S +I+  GL
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 37/266 (13%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           ++  A +IF  V +Q        +Y  +I  L     V+E   L + M+ +         
Sbjct: 270 EVQKAKQIF-LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTY 328

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            SL+       R+   + +   M+  G   ++  +N +L  + + +      + ++ +M 
Sbjct: 329 SSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQN-LDKAIALFMKMK 387

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + GI PN  T   L++ L +  R++     F+ +  KG C +  T+ ++I G        
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISG-------- 439

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
                                      LC+E   +EA+ +   M     +P+ +T+E +I
Sbjct: 440 ---------------------------LCKEGMFDEALAMKSKMEDNGCIPNAVTFEIII 472

Query: 315 NCLCENLRLDDANDILEDMIVIGLTP 340
             L E    D A  +L +MI  GL P
Sbjct: 473 RSLLEKDENDKAEKLLHEMIAKGLLP 498


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 156/659 (23%), Positives = 299/659 (45%), Gaps = 28/659 (4%)

Query: 61  LSPDHLIRVLDNT--NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGL 118
           L+P+ +  VL  +  +D       F W S +        +Y  + ++L  +G + + + +
Sbjct: 83  LNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNM 142

Query: 119 CQNMVKERYPNVREALISLV-----FS---------FVNHYRV----NGAMRVLVNMNSG 160
            + +++ R P + E L SLV     F          F++ +RV    N A  V +   S 
Sbjct: 143 LEKLLQTRKPPL-EILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISE 201

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF  ++   N ++  +++       F  VY  MV+A IVP+V T   +++   +   +  
Sbjct: 202 GFFPTLICCNNLMRDLLKANM-MGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIK 260

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
                  M K+ C PN  T+   I GL     VD+++ +   M + G+  +   YT ++ 
Sbjct: 261 GKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVD 319

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C++ + +EA  +F+ M +  L P+  TY  LI+   +   +++A  I ++MI  GL  
Sbjct: 320 GFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKL 379

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  ++ G+ + G+  ++++   +       P    +N L++    +     A  +L
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELL 439

Query: 397 EKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  RK+     ++++ I  LC + +++KA E+L +M+ + V P+   Y   +    + 
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             YE A+ + + + A  ++ D   Y+ L+ GLC+ +K+ EA  +   M + G   ++ ++
Sbjct: 500 SRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
              I       ++  A R      SSG       YT ++ G   +    + L     ML 
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +G   D+ AY  +I S+S+  K K+    F   +K G+VPD     SL+ G      +  
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            S   ++++ +    +  +YN LINGL K G  ++A  L D +  K  VPD  T+  ++
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTII 738



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 147/669 (21%), Positives = 272/669 (40%), Gaps = 111/669 (16%)

Query: 128  PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
            PN R    +L+  F+    +  A+R+   M + G KL+V  +N ++G I +     A  +
Sbjct: 344  PN-RFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE-MAKAM 401

Query: 188  FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
             ++ EM+ AG+ P+  T N L++   +++ +  A +    M  +   P+  T+ ++I GL
Sbjct: 402  SLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461

Query: 248  IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
              +S +  +  +L +M   G++  +  Y  +I    +E++ E AI L K+M A  ++PD 
Sbjct: 462  CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521

Query: 308  LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
              Y  LI  LC   ++++A  +L DM   G+ P    +   +    + G+   +  + +D
Sbjct: 522  FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581

Query: 368  KCGYVTSPHNA----LLECCCNAGKFFLA----KCILEK--------------------- 398
                   P+N     L++  C+ G    A    KC+LEK                     
Sbjct: 582  MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641

Query: 399  -----------MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                       +    + D   +N  I   C+  +I KA +L   M+ + + P+   Y+ 
Sbjct: 642  TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNT 701

Query: 448  FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF------- 500
             + G CKL     A  +F ++  + LV D ++YS +++G C+   +TEA ++F       
Sbjct: 702  LINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG 761

Query: 501  -------CCMSKNGCSL--------------------SSSSFNILIYGLCVMRKV----- 528
                    C+  +GC                      S S+FN LI   C   KV     
Sbjct: 762  ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARE 821

Query: 529  ------DKAIRLRSLAYS------------------------SGTSYTTSTYTKIMLGLV 558
                  DK +    + Y+                              T TYT ++L   
Sbjct: 822  LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 881

Query: 559  KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
            ++     ++ +   M   G A D  AY ++  +  ++ K  +     N  +  G+  + +
Sbjct: 882  QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDD 941

Query: 619  TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
               +L+  L    Q+  V   ++++  +   L S   N L+ G +K G   +AS +L +M
Sbjct: 942  VFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVM 1001

Query: 679  LGKGWVPDA 687
               GWVP +
Sbjct: 1002 QRLGWVPTS 1010



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 136/613 (22%), Positives = 254/613 (41%), Gaps = 43/613 (7%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           ++L+R L   N +    K++  + ++ +      TY  +I      G+V + + +   M 
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSM-VEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME 269

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
           KE  PN+     + +        V+ A+ V   M   G       + +++    ++KR  
Sbjct: 270 KECKPNLF-TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRS- 327

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            +   +++ M  +G+ PN  T   L++   +   IE AL     M  +G   N  T+  +
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAM 387

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I G+     +  ++S+  EM   G++ +   Y  +I    + + + +A  L   M+A  L
Sbjct: 388 IGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P   TY  LI+ LC +  L  AN++L+ MI  G+ P   ++  +++   +  +++ ++ 
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 364 FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
            L+        P    +N L+   C A K   AK +L  M ++ I  +  ++   I    
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           ++ EI+ A      M+ S +VP+   Y+  + G C + N  +AL  F+ +  + L+ D  
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +YS ++  L +  K  EA+ VF    K G       +N LI G C    ++KA +L    
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +G +     Y  ++ GL KL        +  ++  +    DV  Y  +I    +   L
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            +    F+ M+  G+ PD                                     +Y IL
Sbjct: 748 TEAFKLFDEMISKGISPD-----------------------------------GYIYCIL 772

Query: 659 INGLWKEGLTSQA 671
           I+G  KEG   +A
Sbjct: 773 IDGCGKEGNLEKA 785



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/481 (22%), Positives = 225/481 (46%), Gaps = 29/481 (6%)

Query: 96  ADTYCKMILKLGL--AGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNG--- 149
            D +C   L +GL  A  VEE + L  +M ++   PN          +F+N Y  +G   
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT-----YGAFINLYSKSGEIQ 573

Query: 150 -AMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
            A R   +M S G   +  ++ +++      G  VE        +  +K M++ G++P++
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA-------LSTFKCMLEKGLIPDI 626

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
              + ++  L +  + + A+  F +  K G  P+   +  +I G      ++ +  +  E
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   GI   +  Y  +I  LC+  ++ +A  LF  +   DL+PD +TY  +I+  C++  
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---EDKCGYVTSPHNAL 379
           L +A  + ++MI  G++P   ++  ++ G  + G  +++++     + K     S  N+L
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 806

Query: 380 LECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++  C  GK   A+ + + M D+K+  +  ++ I I    + E + +A +L   M   ++
Sbjct: 807 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           +P+  TY++ +L   ++ N    + +F+ + A+ +  D+I+Y  +    C+  K  EA++
Sbjct: 867 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 926

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +       G  L    F+ LI+ LC  +++   + L S       S ++ T   ++LG  
Sbjct: 927 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 986

Query: 559 K 559
           K
Sbjct: 987 K 987



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/504 (20%), Positives = 219/504 (43%), Gaps = 20/504 (3%)

Query: 137  LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVY 190
            L+       +V  A  +LV+M   G K +   +   +      G I   +R F       
Sbjct: 527  LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF------- 579

Query: 191  KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            K+M+ +GIVPN      L++   +      AL  F+ M +KG  P+ R +  +I  L  N
Sbjct: 580  KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639

Query: 251  SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             +  +++ +  +    G+  ++  Y  +I   C+E  +E+A +L+  M    + P+ + Y
Sbjct: 640  GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699

Query: 311  EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
              LIN LC+   +  A ++ +++    L P    +  I+ G C+ G   E+    ++   
Sbjct: 700  NTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS 759

Query: 371  YVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
               SP       L++ C   G    A  +  +   + +    ++N  I   C++ ++ +A
Sbjct: 760  KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEA 819

Query: 427  YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             EL   MV   + P+  TY+  +    K    E+A ++F  +  ++++ ++++Y+ L+  
Sbjct: 820  RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 879

Query: 487  LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
              Q+    + + +F  M   G +  + ++ ++    C   K  +A++L + +   G    
Sbjct: 880  YNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLE 939

Query: 547  TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
               +  ++  L K ++   +L +L++M  E  +L  +    L+    +     + +    
Sbjct: 940  DDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLG 999

Query: 607  VMVKAGLVPDRETMLSLLHGLADG 630
            VM + G VP   T LSL   ++ G
Sbjct: 1000 VMQRLGWVP---TSLSLTDSISTG 1020



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 1/274 (0%)

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           +++ G MV + +VPD  TY+  +   CK+ +      V  ++  +    +  +Y+  + G
Sbjct: 227 WKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKP-NLFTYNAFIGG 285

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LCQ   + EA+EV   M + G      ++ +L+ G C  ++  +A  +     SSG +  
Sbjct: 286 LCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPN 345

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TYT ++ G +K    ++ L +  +M+  G  L+V  Y  +I  +++  ++      FN
Sbjct: 346 RFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M+ AGL PD  T   L+ G      +      + ++ +         Y++LI+GL    
Sbjct: 406 EMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS 465

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
              +A+ +LD M+  G  P+   +G L+ + V E
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 250/554 (45%), Gaps = 11/554 (1%)

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE---TNRIES 220
           +S  + ++ +GA V   R       ++  M + G+ P + T N LL  L     ++ I  
Sbjct: 122 ISKPLLDISIGAYVACGRPH-QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRL 180

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           +   F    K G   N+ +F I+I G    +R  +++ +LG+M D G   +   Y  I+ 
Sbjct: 181 SKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILD 240

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC++ +L EA  L   M+   L P+  T+  L+   C    L +A +++E M    + P
Sbjct: 241 GLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVP 300

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  ++ G C+ G+  E++   E+      SP    +N L+  C   G       ++
Sbjct: 301 DAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLI 360

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M  R +  +  ++N+ ++W  +  ++ +  + + +M  S  +PD  TY+  +   CK+
Sbjct: 361 EEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKV 420

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A R+  ++  + L +D ++ + ++  LC+  K+ EA ++ C   + G  +   S+
Sbjct: 421 GKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSY 480

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI G     K  +A+RL           +  TY  ++ GL ++ +    +  L ++L 
Sbjct: 481 GTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLE 540

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   D   Y  +I    ++ +++    F N MV+    PD  T  +LL GL     L  
Sbjct: 541 SGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEK 600

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
                N  +S  + +D+  YN +I  L KE    +A  LL+ M  K   PD  T+  ++G
Sbjct: 601 ALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILG 660

Query: 696 --SSVGEEIDSRRF 707
             +  G   D+  F
Sbjct: 661 GLTDAGRMKDAEEF 674



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 231/504 (45%), Gaps = 14/504 (2%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLI---ANSRVDDSVSILGEMFDLGIQLELS 273
           R   A   F RM + G  P   T   ++  L+   ++  +  S ++  +   +G+++  +
Sbjct: 139 RPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTN 198

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  +I   C EN+  EAIR+   MR     PD +TY  +++ LC+  RL++A D+L DM
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
              GL P    F  +V G C +G   E+ N +E        P    +N ++   C  G+ 
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRI 318

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  + E+M + K++ D  ++N  I    E+    + ++L+  M    + P+  TY+  
Sbjct: 319 AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVM 378

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           V    K    ++  +  R++     + D ++Y+ L+   C+V K+ EA  +   M + G 
Sbjct: 379 VKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGL 438

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
            +   + N ++  LC  RK+D+A  L   A   G      +Y  +++G  K ++A   L 
Sbjct: 439 KMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALR 498

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +  +M  +     +  Y  +I  + +  K        + ++++GLVPD  T  +++HG  
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYC 558

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              Q+       NK+V  +   D    N L+ GL KEG+  +A  L +  + KG   DA 
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAV 618

Query: 689 THGLLVGSSVGEEIDSRRF--AFD 710
           ++  ++ S   E    +RF  AFD
Sbjct: 619 SYNTIILSLCKE----KRFGEAFD 638



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 176/380 (46%), Gaps = 10/380 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMV 194
           ++  F    R+  AMR+   M +   KLS DV  +N ++    E       F  + +EM 
Sbjct: 308 MISGFCKQGRIAEAMRLREEMEN--LKLSPDVVTYNTLINGCFEHGSSEEGFKLI-EEME 364

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G+ PN  T N +++   +  +++      R+M + GC P+  T+  +I       ++D
Sbjct: 365 GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMD 424

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++  ++ EM   G++++      ++  LCRE KL+EA  L    R      DE++Y  LI
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI 484

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV 372
               ++ +   A  + ++M    + P+   +  ++ GLC++GK +++++ L++  + G V
Sbjct: 485 IGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLV 544

Query: 373 TS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
                +N ++   C  G+   A     KM ++    D  + N  +  LC+   + KA +L
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
               +      D  +Y+  +L  CK   + +A  +  ++  + L  D  +Y+ ++ GL  
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664

Query: 490 VEKITEAVEVFCCMSKNGCS 509
             ++ +A E    +++ G S
Sbjct: 665 AGRMKDAEEFISKIAEKGKS 684


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 248/534 (46%), Gaps = 21/534 (3%)

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E +G  D + ++  MV++  +P V     LL V+    R +  +   R+M  +    N 
Sbjct: 52  HEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNI 111

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +F I+IK   + S++  ++S  G++  LG    L  ++ ++  LC E+++ EA+  F  
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           +      P+ + +  L+N LC   R+ +A  +L+ M+  GL P    +  IV G+C++G 
Sbjct: 172 I----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227

Query: 358 FDESVNFLE-----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWN 411
              ++N L       +       ++A+++     G+   A+ +  +M ++ I+ +  ++N
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I   C +    +A  LL  M    + PD  T+S  +    K   + +A  ++ ++  +
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++I+Y+ +++G  +  ++  A  +F  M+  GCS    +F+ILI G C  ++VD  
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           ++L       G    T TYT ++ G  +L      L +L +M+  G   +V     L+  
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467

Query: 592 MSEQNKLKDCALFFNVMVKAGL-----------VPDRETMLSLLHGLADGSQLHLVSSGI 640
           +    KLKD    F VM K+ +            PD +T   L+ GL +  +        
Sbjct: 468 LCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELY 527

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++     V D+  YN +I+GL K+    +A+ + D M  KG+ PD  T   L+
Sbjct: 528 EEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 196/411 (47%), Gaps = 17/411 (4%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K +V +++ ++  + ++ R   D   ++ EM + GI PN+ T N ++     + R   A 
Sbjct: 245 KPNVVIYSAIIDGLWKDGRQ-TDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              R M ++   P+  TF ++I  L+   +  ++  +  EM   GI      Y  +I   
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            ++N+L+ A R+F +M      PD +T+  LI+  C   R+DD   +L +M   GL    
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEK 398
             +  ++ G C++G  + +++ L++       P+    N LL+  CN GK   A  + + 
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483

Query: 399 MADRKI------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           M   K+             D  ++NI I  L    +  +A EL   M    +VPD  TY+
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G CK    ++A ++F  + ++    D ++++ L+ G C+V ++ + +EVFC M + 
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           G   ++ ++  LI+G C +  ++ A+ +     SSG    T T   ++ GL
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 214/466 (45%), Gaps = 32/466 (6%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
            D  SAL + + +    R +     Y  +I  L   G   + + L   M ++        
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
              ++  F +  R + A R+L  M        V  F+V++ A+V+E + F +   +Y EM
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK-FFEAEELYNEM 344

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           +  GI+PN  T N +++   + NR+++A   F  M  KGC P+  TF I+I G     RV
Sbjct: 345 LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRV 404

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           DD + +L EM   G+      YT +I   C+   L  A+ L + M +  + P+ +T   L
Sbjct: 405 DDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTL 464

Query: 314 INCLCENLRLDDANDILE-----DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           ++ LC N +L DA ++ +      M +    P +DV  D+           ++ N L   
Sbjct: 465 LDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDV-----------QTYNIL--I 511

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
           CG +            N GKF  A+ + E+M  R  + D  ++N  I  LC+   + +A 
Sbjct: 512 CGLI------------NEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEAT 559

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ++   M      PD  T++  + G CK+    D L VF ++  + +V ++I+Y  L+ G 
Sbjct: 560 QMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGF 619

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           CQV  I  A+++F  M  +G    + +   ++ GL    ++ +A++
Sbjct: 620 CQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 218/488 (44%), Gaps = 18/488 (3%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K +V  F  ++  +  E R   + V +   MV+ G+ PN  T   +++ + +     SAL
Sbjct: 174 KPNVIAFTTLMNGLCREGR-VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 223 DQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +  R+M +     PN   +  +I GL  + R  D+ ++  EM + GI   L  Y C+I  
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C   +  EA RL + M    + PD +T+  LIN L +  +  +A ++  +M+  G+ P 
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  ++ G  +  + D +            SP     + L++  C A +      +L 
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412

Query: 398 KMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M+ R  +A+  ++   I   C+   +  A +LL  M+ S V P+  T +  + G C   
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472

Query: 457 NYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLCQVEKITEAVEVFCCMSK 505
             +DAL +F+ +    + LD+            +Y+ L+ GL    K +EA E++  M  
Sbjct: 473 KLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH 532

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G    + ++N +I GLC   ++D+A ++     S G S    T+T ++ G  K+ R  D
Sbjct: 533 RGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGD 592

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            L V  +M   G   +   Y  LI    +   +      F  M+ +G+ PD  T+ ++L 
Sbjct: 593 GLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLT 652

Query: 626 GLADGSQL 633
           GL    +L
Sbjct: 653 GLWSKEEL 660



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 222/529 (41%), Gaps = 56/529 (10%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + ++ K G  P++ T + LL  L   +R+  AL  F ++    C PN   F  ++ GL 
Sbjct: 133 TFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLC 188

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDE 307
              RV ++V++L  M + G+Q     Y  I+  +C+      A+ L + M  +  + P+ 
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNV 248

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +I+ L ++ R  DA ++  +M   G++P    +  ++ G C  G++ E+   L +
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 368 KCGYVTSPHNALLECCCNA----GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 SP         NA    GKFF A+ +  +M  R I  +  ++N  I    +   
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  +   M      PD  T+S  + G C     +D +++  ++S + LV ++I+Y+ 
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 483 LVEGLCQVE-----------------------------------KITEAVEVFCCMSKNG 507
           L+ G CQ+                                    K+ +A+E+F  M K+ 
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 508 CSLSSS-----------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             L +S           ++NILI GL    K  +A  L       G    T TY  ++ G
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  +   +   M  +G + DV  +  LI    +  ++ D    F  M + G+V +
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             T  +L+HG      ++       +++S     D+     ++ GLW +
Sbjct: 609 AITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 657



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 8/308 (2%)

Query: 397 EKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            KM  R+I  C+  S+ I I+  C   ++  A    G++      P   T+S  + G C 
Sbjct: 100 RKMEMRRIP-CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCV 158

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                +AL  F Q+   ++    I+++ L+ GLC+  ++ EAV +   M ++G   +  +
Sbjct: 159 EDRVSEALHFFHQICKPNV----IAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 214

Query: 515 FNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +  ++ G+C M     A+ L R +   S        Y+ I+ GL K  R  D   + ++M
Sbjct: 215 YGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM 274

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G + ++  Y  +I       +  +       M +  + PD  T   L++ L    + 
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKF 334

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  N+++    + ++  YN +I+G  K+     A  +  LM  KG  PD  T  +L
Sbjct: 335 FEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSIL 394

Query: 694 VGSSVGEE 701
           +    G +
Sbjct: 395 IDGYCGAK 402



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 4/174 (2%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   ++ +D AI L      S        + K++  +V+++R   ++ +  +M +     
Sbjct: 50  GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           ++ ++ ILI+     +KL      F  + K G  P   T  +LLHGL    ++       
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++   + +     +  L+NGL +EG   +A  LLD M+  G  P+  T+G +V
Sbjct: 170 HQICKPNVI----AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 219


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/581 (24%), Positives = 254/581 (43%), Gaps = 19/581 (3%)

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-------EEKRGFADFVFVYKEMVKAG 197
           Y ++G +++L      G  +S D+F V   A+V       + + G    +     M + G
Sbjct: 35  YDLDGRIQLL------GVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELG 88

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
              +    + LL  L + N    A   +RRM  +G       +  V+  L  N  V  + 
Sbjct: 89  FRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE 148

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINC 316
               ++  LG  L+    T ++   CR + L EA R+F KM +     P+ +TY  LI+ 
Sbjct: 149 MFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHG 208

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LCE  RL++A  + ++M+  G  P+   +  +++  C++G  D+++  L++       P 
Sbjct: 209 LCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 268

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
              +  L++  C  GK   A  +  KM    +     ++N  I   C+   +  A++LL 
Sbjct: 269 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS 328

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M   +  P+  TY+  + G C++     A  + R+V    L+ D ++Y+ LV+G C+  
Sbjct: 329 VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 388

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++  A  +F  M+  G      +F  LI GLC + ++++A  +       G S    T+T
Sbjct: 389 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 448

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K+ +AKD+  +   M+   C      +   + ++ +  KL +       M+K 
Sbjct: 449 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 508

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           GLVP   T   L+ G     +  L    + ++       +   Y I+INGL   G   +A
Sbjct: 509 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 568

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSS 712
             +L  M   G  P+  T+ +LV + V      R F   S+
Sbjct: 569 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 609



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/635 (21%), Positives = 273/635 (42%), Gaps = 62/635 (9%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVR 131
            +N++   ++ FKWV  Q  + +  D   +++  L               + ++ +   +
Sbjct: 13  QSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVL---------------VSRDLFGVAQ 57

Query: 132 EALISLVFSFVNHYRVNGA---MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
           +A++ L+    +    NG    M  L  M   GF+LS   ++ +L  + +   GF  F+ 
Sbjct: 58  KAVVLLIQECEDSE--NGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFL- 114

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA-------------LDQ----------- 224
           VY+ MV  G V        ++  L +   +++A             LD            
Sbjct: 115 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANC 174

Query: 225 -----------FRRMHKKGCC-PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
                      F +M K+  C PNS T+ I+I GL    R++++  +  EM + G Q   
Sbjct: 175 RRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPST 234

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             YT +I   C     ++A+++   M     +P+  TY  LI+ LC   ++++AN +   
Sbjct: 235 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 294

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGK 388
           M+  GL P    F  ++ G C+ G    +   L    +  C      +N L+E  C   K
Sbjct: 295 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 354

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
            + A  +L ++ D  +  D  ++NI +   C+  ++  A+ +   M  + + PD  T++A
Sbjct: 355 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 414

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CKL   E A  +   +  + + LD ++++ L++G C++ K  +   +F  M +N 
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  ++ +FN  +  L    K+++A  +       G   +  T+T ++ G  +       L
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L +M   GC+ +V  Y I+I  +    ++++       M   G+ P+  T   L+   
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 594

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
               +L      ++ +V +    +S +Y+ L++G 
Sbjct: 595 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 146/618 (23%), Positives = 278/618 (44%), Gaps = 28/618 (4%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVRE 132
           +DL  A ++F+ +S ++  +  + TY  +I  L  AG +EE   L Q MV++   P+ R 
Sbjct: 177 DDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 236

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
             + L+ +  +    + AM++L  M +     +V  + +++  +  E +   +   V+++
Sbjct: 237 YTV-LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK-IEEANGVFRK 294

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+K G+ P + T N L+    +   + SA      M K  C PN RT+  +++GL   S+
Sbjct: 295 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 354

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              +  +L  + D G+  +   Y  ++   C+E +L  A  +F  M +  L PD  T+  
Sbjct: 355 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 414

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDK 368
           LI+ LC+  RL+ AN IL  M+  G++  +  F  ++ G C++GK  +      N +E++
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
           C       N  L+      K   A  +L KM     +    +  I I   C   E   + 
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ++L RM  +   P+  TY+  + G C     E+A  +   +S+  +  +  +Y+ LV+  
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 594

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL--------RSLAY 539
            +  ++  A ++   M KNGC  +S  ++ L+ G  +      A  L        RSL+ 
Sbjct: 595 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 654

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE-AYCILIQSMSEQNKL 598
               +   S++   ++ +    + +D         ++ C +  E  Y  L+  + ++ ++
Sbjct: 655 EENDNNCLSSHVFRLMDVDHALKIRD--------EIKKCGVPTEDLYNFLVVGLCKEGRI 706

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS-SMYNI 657
            +       MVK GL PD+     + H        + +     KLV D++ + S + Y  
Sbjct: 707 IEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLE--FMKLVLDNKFVPSFASYCW 764

Query: 658 LINGLWKEGLTSQASYLL 675
           +I+GL  EG   +A  L+
Sbjct: 765 VIHGLRNEGRVQEAQKLV 782



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 222/541 (41%), Gaps = 67/541 (12%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN  T + L+  L E  R+E A    + M +KGC P++RT+ ++IK        D ++ +
Sbjct: 197 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 256

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM        +  YT +I  LCRE K+EEA  +F+ M    L P  +T+  LIN  C+
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 316

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---------NFLEDKCG 370
              +  A  +L  M      P    + +++ GLC V K  ++            L D+  
Sbjct: 317 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 376

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           Y     N L++  C  G+  +A  I   M    +  D  ++   I  LC+   + +A  +
Sbjct: 377 Y-----NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 431

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR----------------------- 466
           LG MV   +  D  T++A + G CK+   +D   +F                        
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 491

Query: 467 ------------QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                       ++    LV   ++++ L+EG C+  +   ++++   M + GCS +  +
Sbjct: 492 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 551

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           + I+I GLC   +V++A  +     S G S    TY  ++   VK  R      +++ M+
Sbjct: 552 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 611

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP---------DRETMLSLLH 625
             GC  +   Y  L+        L + A+    +   G +          D   + S + 
Sbjct: 612 KNGCQPNSHIYSALLSGFV----LSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVF 667

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            L D      +   I K    +E     +YN L+ GL KEG   +A  L   M+  G  P
Sbjct: 668 RLMDVDHALKIRDEIKKCGVPTE----DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 723

Query: 686 D 686
           D
Sbjct: 724 D 724


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 163/731 (22%), Positives = 296/731 (40%), Gaps = 111/731 (15%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK- 124
           L R      + ++AL  F+W++ +  F+HTAD++  ++  L       + E L  +M+  
Sbjct: 60  LFRAESTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNC 119

Query: 125 -----------------ERYPNVREALISLVFSF----VNHYRVNGAM-RVLVNMNSGGF 162
                             R  + R AL    ++F    +  + +   M RV   +   G 
Sbjct: 120 SDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGL 179

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFV---YKEMVKAGIVPNVDTLN------------- 206
                 +N ++ +  +E     D       ++ +++ G+ P   T N             
Sbjct: 180 LPDTVTYNTMIKSYCKE----GDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELR 235

Query: 207 ----------------------YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
                                  L++ L E   +  AL  F  M + GC PN R F  +I
Sbjct: 236 KACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLI 295

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GL  + RV D+  +   M   G+   +  Y  +I    +  ++ +A+++ ++M      
Sbjct: 296 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 355

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV-- 362
           PD+ TY  LI  LC+  + ++A ++L + +  G TPT   F +++ G C   KFD+++  
Sbjct: 356 PDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414

Query: 363 --NFLEDKC---------------------------------GYVTS--PHNALLECCCN 385
               +  KC                                 G V +   + ++++  C 
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474

Query: 386 AGKFFLAKCILEKMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
           +GK  +A  +L KM +R     ++W  N  +  L +++++ KA  LL +M    ++P+  
Sbjct: 475 SGKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY+  + G+C   ++++A R+F  +    L  D  +Y+ L + LC   K   A E +  +
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAGRAEEAYSFI 590

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G +L+   +  LI G       D A  L       G +  + TY+ ++  L K +R 
Sbjct: 591 VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 650

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            + L +L QM + G    + AY ILI  M  + K       +N M  +G  P   T    
Sbjct: 651 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVF 710

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           ++      +L      I K+  +    D   YNILI+G    G   +A   L  M+G   
Sbjct: 711 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 770

Query: 684 VPDATTHGLLV 694
            P+  T+ LL+
Sbjct: 771 EPNYWTYCLLL 781



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 148/626 (23%), Positives = 279/626 (44%), Gaps = 31/626 (4%)

Query: 76  LSSALKIFKWVSIQKRFQHTAD-TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           ++ ALKI +   ++K   H  D TY  +I  L      EE E L  N VKE +       
Sbjct: 339 MNDALKIKEL--MEKNGCHPDDWTYNTLIYGL-CDQKTEEAEELLNNAVKEGFTPTVVTF 395

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +L+  +    + + A+R+   M S   KL + VF  ++ +++++ R   +   +  E+ 
Sbjct: 396 TNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR-LKEAKELLNEIS 454

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G+VPNV T   +++   ++ +++ AL+  + M + GC PN+ T+  ++ GL+ + ++ 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++++L +M   GI   +  YT ++   C E+  + A RLF+MM    L PDE  Y  L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCG 370
           + LC+  R ++A   +   +  G+  T   +  ++ G  + G  D +   +E    + C 
Sbjct: 575 DALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 631

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYE 428
             +  ++ LL   C   +   A  IL++M+ R I  C   ++ I I  +    +   A  
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI-KCTIFAYTILIDEMLREGKHDHAKR 690

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   M  S   P   TY+ F+   CK    EDA  +  ++  + +  D ++Y+ L++G  
Sbjct: 691 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 750

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIY-----GLCVMRKVDKA-----------I 532
            +  I  A      M    C  +  ++ +L+       L  +R VD +            
Sbjct: 751 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITW 810

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +L       G + T +TY+ ++ G  K  R ++  ++L  M  +G + + + Y +LI+  
Sbjct: 811 QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCC 870

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +    +    F ++M + G  P  E+   L+ GL +      V S    L+      D 
Sbjct: 871 CDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDE 930

Query: 653 SMYNILINGLWKEGLTSQASYLLDLM 678
             + IL +GL K G       +L +M
Sbjct: 931 VAWKILNDGLLKAGYVDICFQMLSIM 956



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 250/601 (41%), Gaps = 55/601 (9%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V  A+ + + M   G   +V  F  ++  + +  R   D   ++  M + G+VP+V T N
Sbjct: 269 VREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR-VGDARLLFDAMPQNGVVPSVMTYN 327

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            ++    +  R+  AL     M K GC P+  T+  +I GL  + + +++  +L      
Sbjct: 328 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL-CDQKTEEAEELLNNAVKE 386

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G    +  +T +I   C   K ++A+R+   M +     D   + +LIN L +  RL +A
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLEC 382
            ++L ++   GL P    +  I+ G C+ GK D ++  L+    D C      +N+L+  
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506

Query: 383 CCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
                K   A  +L KM  D  I +  ++   ++  C+  +   A+ L   M  + + PD
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566

Query: 442 CATYSAFVLGKCKLCNYEDALR-VFRQVSAQSLVL------------------------- 475
              Y+      CK    E+A   + R+  A + V                          
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626

Query: 476 ------DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 DS +YS L+  LC+ +++ EA+ +   MS  G   +  ++ ILI  +    K D
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 686

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A R+ +   SSG   + +TYT  +    K  R +D   ++ +M  EG A DV  Y ILI
Sbjct: 687 HAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS---SG------- 639
                   +         MV A   P+  T   LL  L  G+  ++ S   SG       
Sbjct: 747 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIEL 806

Query: 640 ------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 + ++V        + Y+ LI G  K G   +A  LLD M GKG  P+   + LL
Sbjct: 807 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 866

Query: 694 V 694
           +
Sbjct: 867 I 867



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 188/427 (44%), Gaps = 31/427 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y   +  L R +  E   R++  +    L+PD +TY  +I   C+   L  A+     ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             GL P       +V G C  G+  ++         ++  P   L+ C  N         
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWL------FLMMP---LMGCQRNEY------- 254

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                         S+ I I+ LCE + +R+A  L   M      P+   ++  + G CK
Sbjct: 255 --------------SYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCK 300

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                DA  +F  +    +V   ++Y+ ++ G  ++ ++ +A+++   M KNGC     +
Sbjct: 301 SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 360

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LIYGLC  +K ++A  L + A   G + T  T+T ++ G    ++  D L +  +M+
Sbjct: 361 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
              C LD++ +  LI S+ ++++LK+     N +   GLVP+  T  S++ G     ++ 
Sbjct: 420 SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVD 479

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    +  +  D    ++  YN L+ GL K+    +A  LL  M   G +P+  T+  L+
Sbjct: 480 IALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 539

Query: 695 GSSVGEE 701
                E 
Sbjct: 540 QGQCDEH 546



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 207/504 (41%), Gaps = 22/504 (4%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAM 151
           Q  A TY  ++  L     + +   L   M K+   PNV     +L+    + +  + A 
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI-TYTTLLQGQCDEHDFDNAF 552

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           R+   M   G K     + V+  A+ +  R    + F+    V+ G+         L++ 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI----VRKGVALTKVYYTTLIDG 608

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +    + A     RM  +GC P+S T+ +++  L    R+++++ IL +M   GI+  
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  YT +I  + RE K + A R++  M +    P   TY   IN  C+  RL+DA D++ 
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
            M   G+ P    +  ++ G   +G  D + + L+   G    P N    C        L
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP-NYWTYC------LLL 781

Query: 392 AKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
              +   +A  +  D    WN+         E+   ++LL RMV   + P   TYS+ + 
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLI--------ELDITWQLLERMVKHGLNPTVTTYSSLIA 833

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    E+A  +   +  + L  +   Y+ L++  C  +   +A+     MS+ G   
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S+ +L+ GLC     +K   L       G ++    +  +  GL+K         +L
Sbjct: 894 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953

Query: 571 AQMLVEGCALDVEAYCILIQSMSE 594
           + M    C +  + Y ++   M E
Sbjct: 954 SIMEKRYCCISSQTYALVTNKMHE 977



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 210/504 (41%), Gaps = 26/504 (5%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     S++  +    +V+ A+ VL  M   G + +   +N ++  +V++K+      
Sbjct: 460 PNVI-TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 518

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            + K M K GI+PNV T   LL+   + +  ++A   F  M + G  P+   + ++   L
Sbjct: 519 LLTK-MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R +++ S +      G+ L   +YT +I    +    + A  L + M      PD 
Sbjct: 578 CKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            TY  L++ LC+  RL++A  IL+ M + G+  T   +  ++  +   GK D +     +
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
                  P    +   +   C  G+   A+ ++ KM    +A D  ++NI I        
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754

Query: 423 IRKAYELLGRMVVSSVVPDCATYS-----------AFVL-----GKCKLCNYEDALRVFR 466
           I +A+  L RMV +S  P+  TY            A+V      G   L   +   ++  
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++    L     +YS L+ G C+  ++ EA  +   M   G S +   + +LI   C  +
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 874

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
             +KA+   S+    G      +Y  +++GL      + +  +   +L  G   D  A+ 
Sbjct: 875 FFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWK 934

Query: 587 ILIQSMSEQNKLKDCALFFNVMVK 610
           IL   + +   +  C    ++M K
Sbjct: 935 ILNDGLLKAGYVDICFQMLSIMEK 958


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 161/695 (23%), Positives = 306/695 (44%), Gaps = 49/695 (7%)

Query: 39  TDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTAD 97
           TD+++ +Q+         +   L P H+ +VL  T D S  AL+ F ++ + K F H+  
Sbjct: 35  TDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTT 94

Query: 98  TYCKMILKLGLAGNV---------------EEMEGLCQNMVKE-RYPNVREALIS--LVF 139
           ++C +I  L +  N+                  EGL ++ +   R  N    L    L+ 
Sbjct: 95  SFCILIHAL-VQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQ 153

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
           ++V + R    + V+  M   G    +   + VL  ++   R F   + ++ E+V +G+ 
Sbjct: 154 TYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIR-IRQFRMALHLFDEIVSSGLR 212

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V     ++  L E      A +   RM   GC  +  T+ + I+GL  N RV ++V I
Sbjct: 213 PDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI 272

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
              +   G++ ++  Y  ++  LC+  + E    +   M     +P E     L++ L +
Sbjct: 273 KNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRK 332

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA- 378
              +  A D++  +   G+ P+  V+  ++  +C+ GK DE+ +   +       P++  
Sbjct: 333 KGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVT 392

Query: 379 ---LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
              L++  C  GK  +A   L KM +  I A    ++  I   C+  ++R A  L   M+
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            + + P+   Y++ + G CK     +A R++ +++ + +  ++ +++ L+ GLC   ++ 
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA ++F  M +     +  ++N+LI G C      +A  L       G    T TY  ++
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 555 LGLVKLQR---AKDLLVVL---AQML--VEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
            GL    R   A++ +  L    Q L  +EGC  +V  Y  LI  + +   +    L   
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCR 632

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVSDSEVL------DSSMYNILI 659
            M+ +  +P++ T    L         +L S G I K +   +VL      ++  YNILI
Sbjct: 633 EMLASNSLPNQNTYACFLD--------YLTSEGNIEKAIQLHDVLLEGFLANTVTYNILI 684

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G  K G   +A+ +L  M+  G  PD  ++  ++
Sbjct: 685 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 719



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 205/438 (46%), Gaps = 27/438 (6%)

Query: 110 GNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G ++E E L  NM  K  +PN     I L+ SF    +++ A+  L  M   G K +V  
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSI-LIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427

Query: 169 FNVV------LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           ++ +      LG +   K        ++ EM+  G+ PNV     L+    +   + +A 
Sbjct: 428 YSSLISGHCKLGKLRAAKS-------LFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             +  M  KG  PN+ TF  +I GL   +R+ ++  + GEM +  +      Y  +I   
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI-------- 334
           C+E     A  L   M    L+PD  TY  LI+ LC   R+ +A + + D+         
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC----CCNAGKFF 390
           + G  P    +  ++ GLC++G  D++     +     + P+     C      + G   
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 660

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            A  + + + +  +A+  ++NI IR  C+   I++A E+L  M+ S + PDC +YS  + 
Sbjct: 661 KAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 720

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             C+  + ++A++++  +  + +  D+++Y+ L+ G C   ++T+A E+   M + G   
Sbjct: 721 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 780

Query: 511 SSSSFNILIYGLCVMRKV 528
           + +++N LI+G C+M  V
Sbjct: 781 NRATYNSLIHGTCLMSSV 798



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 206/445 (46%), Gaps = 14/445 (3%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K G+ P++   N L+  + +  +++ A   F  M  KG  PN  T+ I+I       ++D
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD 407

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++  LG+M ++GI+  +  Y+ +I   C+  KL  A  LF  M A  L P+ + Y  LI
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +  C+   L +A  +  +M   G++P    F  ++ GLC   +  E+     +   +   
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
           P    +N L+E  C  G    A  +L++M ++  + D  ++   I  LC    + +A E 
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587

Query: 430 LGRMV--------VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           +  +         +   +P+  TY+A + G CK+   + A  + R++ A + + +  +Y+
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             ++ L     I +A+++   + + G   ++ ++NILI G C + ++ +A  +      S
Sbjct: 648 CFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDS 706

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S    +Y+ I+    +    K+ + +   ML  G   D  AY  LI       +L   
Sbjct: 707 GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA 766

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHG 626
               + M++ G+ P+R T  SL+HG
Sbjct: 767 FELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 124/529 (23%), Positives = 227/529 (42%), Gaps = 52/529 (9%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM++ G VP+   ++ L++ L +   I SA D   ++ K G  P+   +  +I  +  + 
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++D++ S+   M   G+      Y+ +I   C+  KL+ A+     M  + +      Y 
Sbjct: 370 KLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+  C+  +L  A  + ++MI  GL P   ++  ++ G C+ G+   +     +  G 
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
             SP+                                ++   I  LC    + +A +L G
Sbjct: 490 GISPNTY------------------------------TFTALISGLCHANRMAEANKLFG 519

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            MV  +V+P+  TY+  + G CK  N   A  +  ++  + LV D+ +Y  L+ GLC   
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 492 KITEAVEVFCCMSK--------NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +++EA E    +           GC  +  ++  LI GLC +  +DKA  L     +S +
Sbjct: 580 RVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 639

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
               +TY    L  +  +   +  + L  +L+EG   +   Y ILI+   +  ++++ A 
Sbjct: 640 LPNQNTYA-CFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAE 698

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQL----HLVSSGINKLVSDSEVLDSSMYNILI 659
               M+ +G+ PD  +  ++++       L     L  S +N+ V+     D+  YN LI
Sbjct: 699 VLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP----DTVAYNFLI 754

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEID 703
            G    G  ++A  L D M+ +G  P+  T     HG  + SSV    D
Sbjct: 755 YGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 803



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 214/502 (42%), Gaps = 50/502 (9%)

Query: 218 IESALDQFRRMHKKGCCPNSRT--FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            ES LD +R+      C  S T  F+++I+  + N R  D + ++  M D GI  ++   
Sbjct: 130 FESFLDSYRK------CNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTL 183

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           + ++  L R       IR F+M                            A  + ++++ 
Sbjct: 184 SGVLNGLIR-------IRQFRM----------------------------ALHLFDEIVS 208

Query: 336 IGLTPTDDVFVDIVRGLCEVGKF---DESVNFLEDK-CGYVTSPHNALLECCCNAGKFFL 391
            GL P   V+  +VR LCE+  F    E +  +E   C    + +N  +   C   + + 
Sbjct: 209 SGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWE 268

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  I   ++ + + AD  ++   +  LC+ EE     E++  M+    VP  A  S  V 
Sbjct: 269 AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVD 328

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  K  N   A  +  +V    +      Y+ L+  +C+  K+ EA  +F  M   G   
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  +++ILI   C   K+D A+         G   T   Y+ ++ G  KL + +    + 
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   +V  Y  LI    ++ +L +    ++ M   G+ P+  T  +L+ GL   
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           +++   +    ++V  + + +   YN+LI G  KEG T +A  LLD M+ KG VPD  T+
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 691 GLLVGS--SVGEEIDSRRFAFD 710
             L+    S G   ++R F  D
Sbjct: 569 RPLISGLCSTGRVSEAREFMND 590



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 1/181 (0%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM+ +  +PN +T    L+ L     IE A+ Q   +  +G   N+ T+ I+I+G    
Sbjct: 632 REMLASNSLPNQNTYACFLDYLTSEGNIEKAI-QLHDVLLEGFLANTVTYNILIRGFCKL 690

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R+ ++  +L  M D GI  +   Y+ II   CR   L+EAI+L++ M    + PD + Y
Sbjct: 691 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 750

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI   C    L  A ++ +DM+  G+ P    +  ++ G C +     + ++   K  
Sbjct: 751 NFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLN 810

Query: 371 Y 371
           +
Sbjct: 811 W 811


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 241/534 (45%), Gaps = 10/534 (1%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T   LL  L + N   + +D++ ++ ++G  PN   +  VI  L  +  V D+ SI+ ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
           F  G++ +   YT +I   CR   L+ A  +F  M      P+  TY  LIN LC + R+
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
           ++A D + +M   G+ PT   F   +  LC++G+ +++     D       P N      
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKP-NVYTYTS 373

Query: 384 CNAGKFF--LAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             +G+    +A  +  +M+ D  + +  ++N  +  L EN EI  A  +   M     +P
Sbjct: 374 LISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLP 433

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           + ++Y+  + G C + + E A+ +   +         ++Y+ +++G C       A+ V 
Sbjct: 434 NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVL 493

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M  NGC     S+  LI G C + K++ A  + +     G      TYT ++ G  K 
Sbjct: 494 ELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKD 553

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           ++      +L +M   GC  +V+ Y +LI  +++QN          VM++  + PD  T 
Sbjct: 554 EKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTY 613

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            ++++GL +   + L     NK+V    + +   Y+ LI  L +EG   +A  +   +  
Sbjct: 614 STVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKK 673

Query: 681 KGWVPDATTHGLLVGSSVGEEIDSRRFAF-----DSSSFPD-SVSDILAEGLGN 728
           +G +PD  T+  ++   V      R F F     ++   P     D+L +GL N
Sbjct: 674 QGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 135/620 (21%), Positives = 250/620 (40%), Gaps = 77/620 (12%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           DL SA +IF  +  ++  +  A TY  +I  L  +G V E       M +          
Sbjct: 278 DLDSAFEIFNRMD-EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            + + +  +  R+  A ++ ++M   G K +V  +     +++  +R     + ++  M 
Sbjct: 337 TAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYT----SLISGQRVSRMAIGLFHRMS 392

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G+VPN  T N L+ VL E   I+SAL  F  M K GC PN+ ++  +I+G       +
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++S+L  M        L  Y  II   C     + AIR+ ++M+A    PDE +Y ELI
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCG 370
           +  C+  +++ A+ +  +M+  GL P +  +  ++ G C+  K D +   LE      C 
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD------------CDSWNIP----- 413
                +N L+        F  A+ + + M + KI+             C++  IP     
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 414 -------------------IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV---LG 451
                              I+ L +   + +A E+   +    ++PD  TY   +   + 
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC---------- 501
             K+    D L        Q  +    +Y  L++GL Q E +   +              
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQ---TYDVLIKGL-QNEMVYHKLVALPNAASTSTFDD 748

Query: 502 -CMSKNGCSLSSSSFNILIYGL------CVMRKVDKAIR-------LRSLAYSSGTSYTT 547
             ++K+  S+ SS    L + L       ++ ++ ++ R        RS+  S       
Sbjct: 749 QIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMV-SQSQCPNQ 807

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY   ++ L++  +    + V   M  + C L +  Y  LI ++ + ++ K+    F  
Sbjct: 808 DTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEK 867

Query: 608 MVKAGLVPDRETMLSLLHGL 627
           M+   L  D      L++GL
Sbjct: 868 MLSRALNADEIVWTILINGL 887



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 132/327 (40%), Gaps = 58/327 (17%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  +I  L    N    E LC+ M++E+         +++    N+  +  A+ +   
Sbjct: 576 QTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNK 635

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   ++  ++ ++ A+ +E R   +   ++ E+ K G++P+  T   ++EV   + 
Sbjct: 636 MVKHGCLPNLHTYSSLIQALGQEGR-VEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSG 694

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGL---------------IANSRVDDSV---- 257
           +++ A D    M   GC P  +T++++IKGL                + S  DD +    
Sbjct: 695 KVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKD 754

Query: 258 --SILG-EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE--- 311
             S+L  ++ +L  +L    Y  ++  L R  +  EA  L++ M +    P++ TY+   
Sbjct: 755 VISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFL 814

Query: 312 --------------------------------ELINCLCENLRLDDANDILEDMIVIGLT 339
                                           ELI  LC+  R  +A  + E M+   L 
Sbjct: 815 ISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALN 874

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLE 366
             + V+  ++ GL   G  D  + FL 
Sbjct: 875 ADEIVWTILINGLLGAGYKDLCMEFLH 901


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 231/502 (46%), Gaps = 22/502 (4%)

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIV 199
           FV   R + A+ +   M      L++  FN+++    +  K  F+  +  + ++ K G  
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTKLGFQ 173

Query: 200 PNVDTLNYLLEVLFETNRIESAL----------DQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           P+V T N LL  L   +RI  AL            F +M + G  P   TF  +I GL  
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCL 233

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             RV ++ +++ +M   G+ +++  Y  I+  +C+    + A+ L   M    + PD + 
Sbjct: 234 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 293

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  +I+ LC++    DA  +  +M+  G+ P    +  ++ G C  G++ ++   L D  
Sbjct: 294 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 353

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
               +P     NAL+      GK F A+ + ++M  R I  D  ++N  I   C++    
Sbjct: 354 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 413

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  +   M      PD  T++  +   C+    ++ +++ R++S + LV ++ +Y+ L+
Sbjct: 414 DAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 469

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G C+V+ +  A ++F  M  +G    + + NIL+YG C   K+++A+ L  +   S   
Sbjct: 470 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 529

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             T  Y  I+ G+ K  +  +   +   + + G   DV+ Y ++I     ++ + D  + 
Sbjct: 530 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 589

Query: 605 FNVMVKAGLVPDRETMLSLLHG 626
           F+ M   G  PD  T  +L+ G
Sbjct: 590 FHKMKDNGHEPDNSTYNTLIRG 611



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/566 (21%), Positives = 242/566 (42%), Gaps = 54/566 (9%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME-GLCQ 120
           S  H  + LD+      A+  F ++   + F    D  C  ++ + +  N  ++   L +
Sbjct: 79  SGSHYFKSLDD------AIDFFDYMVRSRPFYTAVD--CNKVIGVFVRMNRPDVAISLYR 130

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M   R P    +   L+  F + ++++ ++     +   GF+  V  FN +L  +  E 
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 181 R---GFADFVF------VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           R     A F +      ++ +MV+ G+ P V T N L+  L    R+  A     +M  K
Sbjct: 191 RISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 250

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G   +  T+  ++ G+        ++++L +M +  I+ ++  Y+ II  LC++    +A
Sbjct: 251 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 310

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT---------- 341
             LF  M    + P+  TY  +I+  C   R  DA  +L DMI   + P           
Sbjct: 311 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370

Query: 342 --------------DD-----VFVDIVR------GLCEVGKFDESVNFLEDKCGYVTSPH 376
                         D+     +F D V       G C+  +FD++ +  +          
Sbjct: 371 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTF 430

Query: 377 NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N +++  C A +      +L +++ R  +A+  ++N  I   CE + +  A +L   M+ 
Sbjct: 431 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 490

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             V PD  T +  + G C+    E+AL +F  +    + LD+++Y+ ++ G+C+  K+ E
Sbjct: 491 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 550

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A ++FC +  +G      ++N++I G C    +  A  L      +G     STY  ++ 
Sbjct: 551 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 610

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALD 581
           G +K       + ++++M   G + D
Sbjct: 611 GCLKAGEIDKSIELISEMRSNGFSGD 636



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 112/252 (44%), Gaps = 27/252 (10%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ ++R++  + + L+  S++ L++  C   K++ ++  F  ++K G      +FN L++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC+  ++ +A+ L      +G+                         +  QM+  G   
Sbjct: 185 GLCLEDRISEALALFGYMVETGS-------------------------LFDQMVEIGLTP 219

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            V  +  LI  +  + ++ + A   N MV  GL  D  T  ++++G+          + +
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
           +K+       D  +Y+ +I+ L K+G  S A YL   ML KG  P+  T+  ++    S 
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339

Query: 699 GEEIDSRRFAFD 710
           G   D++R   D
Sbjct: 340 GRWSDAQRLLRD 351



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 10/184 (5%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G    + +D AI        S   YT     K++   V++ R    + +  +M +    L
Sbjct: 80  GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           ++ ++ ILI+   + +KL      F  + K G  PD  T  +LLHGL    ++    +  
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 641 NKLVSDSEVLDSSM----------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             +V    + D  +          +N LINGL  EG   +A+ L++ M+GKG   D  T+
Sbjct: 200 GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 259

Query: 691 GLLV 694
           G +V
Sbjct: 260 GTIV 263



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 41/218 (18%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVD 203
           RV+  M++L  ++  G   +   +N ++     V+      D   +++EM+  G+ P+  
Sbjct: 442 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD---LFQEMISHGVCPDTI 498

Query: 204 TLNYLLEVLFETNRIESALDQFR--RMHK------------KGCC--------------- 234
           T N LL    E  ++E AL+ F   +M K             G C               
Sbjct: 499 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 558

Query: 235 ------PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
                 P+ +T+ ++I G    S + D+  +  +M D G + + S Y  +I    +  ++
Sbjct: 559 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 618

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           +++I L   MR+     D  T + + + + +  RLD +
Sbjct: 619 DKSIELISEMRSNGFSGDAFTIKMVADLITDG-RLDKS 655


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 147/650 (22%), Positives = 261/650 (40%), Gaps = 75/650 (11%)

Query: 49  DYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           D E  +        P+ ++ V+    D++ A + F+WV  + +  H  + Y   ++ +  
Sbjct: 86  DVEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMAR 145

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
             N++ +E + + M    +       + LV SFV  +++  A  V+  M    F+ +   
Sbjct: 146 TRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSA 205

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +  ++GA                                    L   NR +  L  F +M
Sbjct: 206 YTTLIGA------------------------------------LSAANRPDPMLTLFHQM 229

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G   N   F  +++      R+D ++S+L EM       +L  Y   I    +  K+
Sbjct: 230 QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKV 289

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + A + F  M+A  L+PD++TY  LI  LC+  RLD+A ++ E++ +    P    +  +
Sbjct: 290 DMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349

Query: 349 VRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G    GKFDE+ + LE   + G + S   +N +L C    GK   A  I ++M     
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA 409

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  ++NI I  LC+  E+  A ++   M  + + P+  T +                  
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI----------------- 452

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
                             +++ LC+ +K+ EA  +F  +    CS  S +F  LI GL  
Sbjct: 453 ------------------MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGR 494

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             +VD A  L      S        YT ++    K  R +D   +  +M+  GC+ D+  
Sbjct: 495 RGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLML 554

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
               +  + +  +++     F  +   GLVPD  +   L+HGL              ++ 
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                LD   YN +I+G  K G   +A  LL+ M  KG  P   T+G +V
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVV 664



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 142/648 (21%), Positives = 263/648 (40%), Gaps = 79/648 (12%)

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           +F+     Y  +I  L  A   + M  L   M +  Y        +LV  F    R++ A
Sbjct: 198 KFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAA 257

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + +L  M S  F   + ++NV +      K G  D  +  + EM   G+VP+  T   L+
Sbjct: 258 LSLLDEMKSNSFTADLVLYNVCIDCF--GKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315

Query: 210 EVLFETNRIESALDQFR-----------------------------------RMHKKGCC 234
            VL +  R++ A++ F                                    R  +KGC 
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+   +  ++  L    +V++++ I  EM        L+ Y  +I MLC+  +LE A+++
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLTTYNILIDMLCKAGELEAALKV 434

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M+   L P+ +T   +I+ LC+  +LD+A  I   +     +P    F  ++ GL  
Sbjct: 435 QDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGR 494

Query: 355 VGKFDESVNFLED---------------------KCGYVTSPH----------------- 376
            G+ D++ +  E                      KCG     H                 
Sbjct: 495 RGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLML 554

Query: 377 -NALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N+ ++C   AG+    + + E++ A   + D  S++I I  L +    R+ Y+L   M 
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  D   Y+  + G CK    + A ++  ++  + L    ++Y  +V+GL +++++ 
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLD 674

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA  +F      G  L+   ++ LI G   + ++D+A  +       G +  + T+  ++
Sbjct: 675 EAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLL 734

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
             LVK +   +  V    M    C+ +   Y I+I  +    K     +F+  M K GL 
Sbjct: 735 DALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLK 794

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
           P+  T  +++ GLA    +       ++  +   V DS+ YN +I GL
Sbjct: 795 PNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGL 842



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 135/585 (23%), Positives = 259/585 (44%), Gaps = 11/585 (1%)

Query: 50  YEAKIQSL-RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           +E K Q L   +++   LI VL     L  A+++F+ + +  R       Y  MI+  G 
Sbjct: 297 HEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLN-RSVPCVYAYNTMIMGYGS 355

Query: 109 AGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           AG  +E   L +   ++   P+V  A   ++       +V  A+R+   M       ++ 
Sbjct: 356 AGKFDEAYSLLERQKRKGCIPSVI-AYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLT 413

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +N+++  + +     A    V   M +AG+ PN+ T+N +++ L +  +++ A   F  
Sbjct: 414 TYNILIDMLCKAGELEAALK-VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLG 472

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           +  K C P+SRTF  +I GL    RVDD+ S+  +M D      +  YT +I    +  +
Sbjct: 473 LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGR 532

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            E+  +++K M      PD +     ++C+ +   ++    + E++   GL P    +  
Sbjct: 533 KEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSI 592

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GL + G   E+        E         +N +++  C +GK   A  +LE+M  + 
Sbjct: 593 LIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG 652

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +     ++   +  L + + + +AY L        V  +   YS+ + G  K+   ++A 
Sbjct: 653 LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAY 712

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++  + L  +S +++ L++ L + E+I EA   F  M    CS ++ +++I+I GL
Sbjct: 713 LILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGL 772

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C++RK +KA          G      TYT ++ GL K     +   +  +    G   D 
Sbjct: 773 CMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDS 832

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             Y  +I+ +S  NK  D  + F      G   + +T + LL  L
Sbjct: 833 ACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL 877



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 175/365 (47%), Gaps = 9/365 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +YKEMV  G  P++  LN  ++ +F+   +E     F  +  +G  P+ R++ I+I GL+
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                 ++  +  EM + G+ L++  Y  +I   C+  K+++A +L + M+   L P  +
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +++ L +  RLD+A  + E+   IG+     ++  ++ G  +VG+ DE+   LE+ 
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
                +P+    N LL+    A +   A+   + M + K + +  +++I I  LC   + 
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA+     M    + P+  TY+  + G  K  N  +A  +F +  A   V DS  Y+ +
Sbjct: 779 NKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAM 838

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL----CVMRKVDKAIRLRSLAY 539
           +EGL    K  +A  VF      GC ++S +  +L+  L    C+ +       LR +A 
Sbjct: 839 IEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898

Query: 540 SSGTS 544
           S   +
Sbjct: 899 SQHAT 903


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 255/555 (45%), Gaps = 12/555 (2%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           A  +LV  +  + +++ A R++ +M       +   +  ++  + +  R   + + +  +
Sbjct: 146 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYT---YTPIIRGLCDRGR-VGEALSLLDD 201

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  G  P+V T   LLE + ++     A++    M  KGC PN  T+ ++I G+    R
Sbjct: 202 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 261

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+   L  +   G Q +   YT ++  LC   + E+   LF  M   + MP+E+T++ 
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 321

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+   C    ++ A  +LE M   G      +   ++  +C+ G+ D++  FL +   Y 
Sbjct: 322 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
            SP    +  +L+  C A ++  AK +L++M  +     + ++N  I  LC+   I +A 
Sbjct: 382 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 441

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L+ +M       +  TY+A V G C     + AL +F  +  +    ++I+Y+ L+ GL
Sbjct: 442 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGL 498

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C  E++  A E+   M +  C+ +  +FN+L+   C    +D+AI L       G +   
Sbjct: 499 CNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 558

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ G+ K   +++ L +L  ++  G + D+  Y  +I  +S ++++++    F++
Sbjct: 559 ITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 618

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   G+ P       +L  L               +VS+  + +   Y  LI GL  E  
Sbjct: 619 VQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDF 678

Query: 668 TSQASYLLDLMLGKG 682
             +   LL  +  +G
Sbjct: 679 LKETRDLLRELCSRG 693



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/598 (21%), Positives = 251/598 (41%), Gaps = 43/598 (7%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ +     R + A RVL      G  + V  +N ++         +       + +   
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR----YGQLDAARRLIASM 170

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            + P+  T   ++  L +  R+  AL     M  +GC P+  T+ ++++ +  ++    +
Sbjct: 171 PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 230

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + +L EM   G    +  Y  II  +CRE ++++A      + +    PD ++Y  ++  
Sbjct: 231 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 290

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   R +D  ++  +M+     P +  F  +VR  C  G  + ++  LE   G+  + +
Sbjct: 291 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 350

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
             L                               NI I  +C+   +  A++ L  M   
Sbjct: 351 TTLC------------------------------NIVINTICKQGRVDDAFQFLNNMGSY 380

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              PD  +Y+  + G C+   +EDA  + +++  ++   + ++++  +  LCQ   I +A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             +   MS++GC ++  ++N L+ G CV  +VD A+    L YS      T TYT ++ G
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL---ELFYSMPCKPNTITYTTLLTG 497

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L   +R      +LA+ML + CA +V  + +L+    ++  + +       M++ G  P+
Sbjct: 498 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +LL G+            ++ LVS+    D   Y+ +I  L +E    +A  +  
Sbjct: 558 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 617

Query: 677 LMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVSDI-LAEGLGN 728
           ++   G  P A  +      L    +    ID   +   +   P+ ++ I L EGL N
Sbjct: 618 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 675



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A R+  + +++    D    +KL+  LC+  + ++A  V     ++G ++   ++N L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C   ++D A RL +    +  +Y   TYT I+ GL    R  + L +L  ML  GC  
Sbjct: 153 GYCRYGQLDAARRLIASMPVAPDAY---TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            V  Y +L++++ +           + M   G  P+  T   +++G+    ++      +
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N+L S     D+  Y  ++ GL           L   M+ K  +P+  T  +LV
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 16/199 (8%)

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A RL   A S G +      TK++  L +  R  D   VL      G A+DV AY  L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD----GSQLHLVSSGINKLVS 645
                  +L         M  A   PD  T   ++ GL D    G  L L+   +++   
Sbjct: 152 AGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV--GEEID 703
            S V     Y +L+  + K     QA  +LD M  KG  P+  T+ +++      G   D
Sbjct: 209 PSVV----TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 264

Query: 704 SRRFAFDSSSF---PDSVS 719
           +R F    SS+   PD+VS
Sbjct: 265 AREFLNRLSSYGFQPDTVS 283


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 239/507 (47%), Gaps = 32/507 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  +M+K G  P++ TL+ LL     + RI  A+    +M + G  P++ TF  +I GL 
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLF 196

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +++  ++V+++ +M   G Q +L  Y  ++  LC+   ++ A+ L K M    +  D +
Sbjct: 197 LHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  +I+ LC+   +DDA  +   M   G+ P  DVF                       
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRP--DVFT---------------------- 292

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
                  +N+L+ C CN G++  A  +L  M +RKI  +  +++  I    +  ++ +A 
Sbjct: 293 -------YNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L   M+  S+ PD  TYS+ + G C     ++A  +F  + ++    + ++Y+ L++G 
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+ +++ E +E+F  MS+ G   ++ ++N LI GL      D A ++     S G     
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY+ ++ GL K  + +  LVV   +       D+  Y I+I+ M +  K++D    F  
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   G+ P+     +++ G           +   ++  D  + DS  YN LI    ++G 
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 585

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
            + ++ L+  M   G+V DA+T  +++
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVI 612



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 228/499 (45%), Gaps = 6/499 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    ++  A+ VL  M   G++  +   + +L      KR  +D V +  +MV+ 
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR-ISDAVALVDQMVEM 179

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+  T N L+  LF  N+   A+    +M ++GC P+  T+  V+ GL     +D +
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +S+L +M    I+ ++  Y  II  LC+   +++A  LF  M    + PD  TY  LI+C
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC   R  DA+ +L +MI   + P    F  ++    + GK  E+    ++       P 
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
              +++L+   C   +   AK + E M  +    +  ++N  I+  C+ + + +  EL  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    +V +  TY+  + G  +  + + A ++F+++ +  +  D I+YS L++GLC+  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+ +A+ VF  + K+       ++NI+I G+C   KV+    L       G       YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  +    ++   +  +M  +G   D   Y  LI++          A     M   
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSC 599

Query: 612 GLVPDRETMLSLLHGLADG 630
           G V D  T+  +++ L DG
Sbjct: 600 GFVGDASTISMVINMLHDG 618



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 121/522 (23%), Positives = 222/522 (42%), Gaps = 48/522 (9%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+  F  M +    P+   F  ++  +    + D  +S+   M +L I  +L  Y 
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR ++L  A+ +   M  L   PD +T   L+N  C + R+ DA  +++ M+ +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P    F  ++ GL    K  E+V  ++        P    + A++   C  G   LA
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L+KM   KI AD   +N  I  LC+ + I  A+ L  +M    + PD  TY++ +  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 452 KCKLCNYEDALR-----------------------------------VFRQVSAQSLVLD 476
            C    + DA R                                   ++ ++  +S+  D
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +YS L+ G C  +++ EA  +F  M    C  +  ++N LI G C  ++V++ + L  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G    T TY  ++ GL +         +  +M+ +G   D+  Y IL+  + +  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDS 652
           KL+   + F  + K+ + PD  T   ++ G+    ++     L  S   K V  + ++  
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII-- 537

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             Y  +I+G  ++GL  +A  L   M   G +PD+  +  L+
Sbjct: 538 --YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 170/415 (40%), Gaps = 40/415 (9%)

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSP 375
           NL+LDDA  +  +M+     P+   F  ++  + ++ KFD  ++  E     +  Y    
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 376 HNALLECCCNAGKFFLAKCILEKM--------------------ADRKIADC-------- 407
           +N L+ C C   +  LA  +L KM                      ++I+D         
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 408 --------DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                    ++N  I  L  + +  +A  L+ +MV     PD  TY A V G CK  + +
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            AL + +++    +  D + Y+ +++GLC+ + I +A  +F  M   G      ++N LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             LC   +   A RL S       +    T++ ++   VK  +  +   +  +M+     
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            D+  Y  LI      ++L +    F +M+     P+  T  +L+ G     ++      
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             ++     V ++  YN LI GL++ G    A  +   M+  G  PD  T+ +L+
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 118/281 (41%)

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N ++  A  L G MV S  +P    ++  +    K+  ++  + +  ++    +  D  S
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+   C+  ++  A+ V   M K G      + + L+ G C  +++  A+ L     
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G    T T+  ++ GL    +A + + ++ QM+  GC  D+  Y  ++  + ++  + 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                   M K  +  D     +++ GL     +    +  NK+ +     D   YN LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           + L   G  S AS LL  M+ +   P+  T   L+ + V E
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKE 338


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 160/670 (23%), Positives = 296/670 (44%), Gaps = 61/670 (9%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWV-SIQKRF--QHTADTYCKMILKLGLAGNVEEMEG 117
           L P+HL  +L  T  +    +++ +  SI K    +++   +        L G + +   
Sbjct: 48  LEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNF--------LFGVLMDTYP 99

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           LC +      P V + LI +   ++    V  A+    +M   GFK SV   N+++ ++V
Sbjct: 100 LCSS-----NPAVFDLLIRV---YLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMV 151

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           +  R    + F +K+M+ + + PNV + N L+ VL    +++ A++    M + G  P  
Sbjct: 152 KNCRAHLVWSF-FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            ++  ++       R   ++ ++  M   GIQ ++  Y   I  LCR ++  +   + K 
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           MR   + P+E++Y  LIN   +  ++  A  +  +MI + L+P    +  ++ G C  G 
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330

Query: 358 FDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNI 412
           F+E++  L+        P+      LL     + KF +A+ ILE+   +R   +C S  +
Sbjct: 331 FEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTV 390

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC N  + +A++LL  M    V PD  T+S  + G CK+ N   A  V  ++  + 
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            V +++ +S L+   C+V  + EA++ +  M+ NG +  + + N L+  LC   K+ +A 
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510

Query: 533 RL-----------RSLAY------------------------SSGTSYTTSTYTKIMLGL 557
                         S+ +                        S G   +  TY  ++  L
Sbjct: 511 EFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVL 570

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K Q   +   +L ++     A+D  +Y  LI  +S+   L +    F  M++  ++PD 
Sbjct: 571 CKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDS 630

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLD 676
            T   +L GL    +L      + +L+    + L+S +Y   I+GL+K G +  A YL  
Sbjct: 631 YTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFK 690

Query: 677 LMLGKGWVPD 686
            M  KG   D
Sbjct: 691 EMEEKGLSLD 700



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 227/535 (42%), Gaps = 48/535 (8%)

Query: 169 FNVVLGAIVEE-KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +N ++   V+E K G A  VF   EM++  + PN+ T N L+         E AL     
Sbjct: 283 YNTLINGFVKEGKIGVATRVF--NEMIELNLSPNLITYNILINGYCINGNFEEALRVLDV 340

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M      PN  T   ++ GL  +++ D + +IL         L    +T +I  LCR   
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGL 400

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA +L   M    + PD +T+  LIN  C+   ++ A +++  +   G  P + +F  
Sbjct: 401 LDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFST 460

Query: 348 IVRGLCEVG------KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
           ++   C+VG      KF  ++N         T   N+L+   C  GK   A+  L  ++ 
Sbjct: 461 LIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTC--NSLVASLCENGKLVEAEEFLHHISR 518

Query: 402 RK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
              + +  +++  I       +   A+ +  RM+     P   TY + +   CK  N+ +
Sbjct: 519 IGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWE 578

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A ++ +++    L +D+ISY+ L+  + +   + EAV +F  M +N     S ++  ++ 
Sbjct: 579 ARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638

Query: 521 GLCVM-RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
           GL    R V   I L  L      +  +  YT  + GL K  ++K  L +  +M  +G +
Sbjct: 639 GLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLS 698

Query: 580 LDVEA-----------------------------------YCILIQSMSEQNKLKDCALF 604
           LD+ A                                   + IL+   S    +  C   
Sbjct: 699 LDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKL 758

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +N+M ++G  P+R T  SL+ GL +   L L    +   +++S  +D   +N+LI
Sbjct: 759 YNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLI 813



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/549 (21%), Positives = 219/549 (39%), Gaps = 65/549 (11%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V  +  M+  G  P+V T N ++  + +  R       F++M     CPN  +F I+I  
Sbjct: 125 VNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISV 184

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    ++  +V+IL  M   G    +  Y  ++   C++ + + A+ L   M    +  D
Sbjct: 185 LCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQAD 244

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY   I+ LC N R      +L+ M    +TP +  +  ++ G  +           E
Sbjct: 245 VCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVK-----------E 293

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
            K G  T   N ++E   +                    +  ++NI I   C N    +A
Sbjct: 294 GKIGVATRVFNEMIELNLSP-------------------NLITYNILINGYCINGNFEEA 334

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +L  M  + V P+  T    + G  K   ++ A  +  +       L+ IS++ +++G
Sbjct: 335 LRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDG 394

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+   + EA ++   M K+G      +F++LI G C +  ++KA  + S  Y  G    
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPN 454

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              ++ ++    K+    + +   A M + G   D      L+ S+ E  KL +   F +
Sbjct: 455 NVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLH 514

Query: 607 VMVKAGLVPDRETMLSLLHGLAD--------------------------GSQLHLVSSGI 640
            + + GLVP+  T   +++G A+                          GS L ++  G 
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQ 574

Query: 641 N---------KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           N         KL      +D+  YN LI  + K G   +A  L + M+    +PD+ T+ 
Sbjct: 575 NFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYT 634

Query: 692 LLVGSSVGE 700
            ++   + E
Sbjct: 635 CILSGLIRE 643



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 120/617 (19%), Positives = 257/617 (41%), Gaps = 37/617 (5%)

Query: 110  GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
            GN+ + + +   + +E +        +L+++      V  AM+    MN  G        
Sbjct: 434  GNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTC 493

Query: 170  NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            N ++ ++ E  +      F++  + + G+VPN  T + ++           A   F RM 
Sbjct: 494  NSLVASLCENGKLVEAEEFLH-HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMI 552

Query: 230  KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
              G  P+  T+  ++K L       ++  +L ++  + + ++   Y  +I  + +   L 
Sbjct: 553  SCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLL 612

Query: 290  EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDI 348
            EA+RLF+ M   +++PD  TY  +++ L    RL  A   L  ++    LT    V+   
Sbjct: 613  EAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCF 672

Query: 349  VRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK- 403
            + GL + G+   ++       E          N++ +     GK F A  ++ K  ++  
Sbjct: 673  IDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNV 732

Query: 404  IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
            I +  ++NI +      ++I   ++L   M  S   P+  TY + +LG C     E  ++
Sbjct: 733  IPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIK 792

Query: 464  VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            + +   A+S  +D ++++ L+   C++  + + +++              + N+ ++ + 
Sbjct: 793  MLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDL--------------THNMEVFRVS 838

Query: 524  VMRKVDKAI------RLRSLAY--------SSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            + +   KA+      R+ S  Y          G   T+  Y  +M  + ++   +    +
Sbjct: 839  LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 570  LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
              QM+  G +LD  A C +++ ++   K+++       M++   +P   T  +L+H    
Sbjct: 899  KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCK 958

Query: 630  GSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
                   +  +  L+    V LD   YN+LI+     G    A    + +  KG +P+ T
Sbjct: 959  KDNFK-EAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMT 1017

Query: 689  THGLLVGSSVGEEIDSR 705
            T+ +LV +   +   SR
Sbjct: 1018 TYRVLVSAISTKHYVSR 1034



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 101/467 (21%), Positives = 187/467 (40%), Gaps = 46/467 (9%)

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + +  +I +  R+  +  A+  F  M      P   T   ++  + +N R        + 
Sbjct: 106 AVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQ 165

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAGK 388
           M+   + P    F  ++  LC  GK  ++VN L   ++ GYV +   +N LL  CC  G+
Sbjct: 166 MLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGR 225

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           F  A  ++  M  + I AD  ++N+ I  LC N    + Y +L +M    + P       
Sbjct: 226 FKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP------- 278

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
                                       + +SY+ L+ G  +  KI  A  VF  M +  
Sbjct: 279 ----------------------------NEVSYNTLINGFVKEGKIGVATRVFNEMIELN 310

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            S +  ++NILI G C+    ++A+R+  +  ++       T   ++ GL K  +     
Sbjct: 311 LSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVAR 370

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L +  +   +L+  ++ ++I  +     L +       M K G+ PD  T   L++G 
Sbjct: 371 NILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGF 430

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                ++     ++K+  +  V ++ +++ LI    K G   +A      M   G   D 
Sbjct: 431 CKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADN 490

Query: 688 TTHGLLVGS--SVGEEIDSRRFAFDSSSF---PDSVS-DILAEGLGN 728
            T   LV S    G+ +++  F    S     P+SV+ D +  G  N
Sbjct: 491 FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 211/504 (41%), Gaps = 24/504 (4%)

Query: 149  GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP-NVDTLNY 207
            GA  V   M S G   S   +  +L  + + +    +F    K + K   +P  VDT++Y
Sbjct: 543  GAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQ----NFWEARKLLKKLHCIPLAVDTISY 598

Query: 208  ---LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
               ++E+    N +E A+  F  M +    P+S T+  ++ GLI   R+  +   LG + 
Sbjct: 599  NTLIVEISKSGNLLE-AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 265  DLGI-QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
               I  L    YTC I  L +  + + A+ LFK M    L  D +    + +      ++
Sbjct: 658  QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717

Query: 324  DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF--LEDKCGYVTS--PHNAL 379
              A+ ++       + P    F  ++ G               L  + G+  +   +++L
Sbjct: 718  FSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSL 777

Query: 380  LECCCNAGKFFLAKCILEK-MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
            +   CN G   L   +L+  +A+    D  ++N+ IR  CE  ++ K  +L   M V  V
Sbjct: 778  ILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRV 837

Query: 439  VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
              D  T  A      +    ++      ++  +  +  S  Y  +++ +C+V  I  A +
Sbjct: 838  SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFK 897

Query: 499  VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
            +   M   G SL  ++   ++ GL +  K+++A+ +           TTST+T +M    
Sbjct: 898  LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFC 957

Query: 559  K---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            K    + A +L +++    V+   LD+ AY +LI +      +     F+  + + GL+P
Sbjct: 958  KKDNFKEAHNLKILMEHYRVK---LDIVAYNVLISACCANGDVITALDFYEEIKQKGLLP 1014

Query: 616  DRETMLSLLHGLADGSQLHLVSSG 639
            +  T   L+  +   S  H VS G
Sbjct: 1015 NMTTYRVLVSAI---STKHYVSRG 1035


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 252/546 (46%), Gaps = 20/546 (3%)

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           AD V    EM   G+   V+T N++L V  ET     A   F  M + G  P +R F  +
Sbjct: 23  ADMVL---EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGAL 79

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           +       +V++  ++L  M+  G  L+ +  T ++  LC + + ++    F+ M     
Sbjct: 80  VVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGT 139

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+ + Y   I+ LC+   +  A  +LE+M+  GL P       ++ GLC++G  + +  
Sbjct: 140 PPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFR 199

Query: 364 -FLE--DKCGYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
            FL+      Y  + H    ++   C  GK   A+ +L +M ++ +  + +++   I   
Sbjct: 200 LFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGH 259

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+     +A+EL+ +M     +P+  TY+A + G CK    ++A +V R  ++Q L  D 
Sbjct: 260 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 319

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           I+Y+ L+   C+   IT A+++F  M +NGC     ++  LI   C  R+++++ +    
Sbjct: 320 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 379

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G   T  TYT ++ G  K+ R+   L V  +M+  GC  D   Y  LI  + ++++
Sbjct: 380 CLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESR 439

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L++    +  M+   LVP   T ++L        +  +  S +++L    +V      ++
Sbjct: 440 LEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQV---HTVDV 496

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-------SVGEEIDSRRFAFD 710
           ++  L   G    AS  L  +L + +  D  T+   + S       ++  E+ S +F+  
Sbjct: 497 VVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEM-SEKFSKK 555

Query: 711 SSSFPD 716
            SSF +
Sbjct: 556 ISSFKE 561



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 197/444 (44%), Gaps = 48/444 (10%)

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF--- 188
           E +  +V +F    R+  A  +++ M S G  L V+  N VL   +E       FV+   
Sbjct: 4   EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLET----GSFVYARK 59

Query: 189 VYKEMVKAGIVP----------------NVDTLNYLLEVLF------------------- 213
           V+  M +AG+ P                 V+ ++ LL  ++                   
Sbjct: 60  VFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 119

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           E  R +   + FRRM + G  PN   +   I GL     V  +  +L EM   G++  + 
Sbjct: 120 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 179

Query: 274 FYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
            +T +I  LC+    E A RLF K++++    P+  TY  +I   C   +L  A  +L  
Sbjct: 180 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 239

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAGK 388
           M+  GL P  + +  ++ G C+ G FD +   +    + G++ +   +NA+++  C  GK
Sbjct: 240 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 299

Query: 389 FFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +L     + +  D  ++ I I   C+   I  A +L  RMV +   PD   Y++
Sbjct: 300 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTS 359

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   C+    E++ + F +     L+    +Y+ ++ G C+V + T A+ VF  M +NG
Sbjct: 360 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 419

Query: 508 CSLSSSSFNILIYGLCVMRKVDKA 531
           C   S ++  LI GLC   ++++A
Sbjct: 420 CFADSITYGALISGLCKESRLEEA 443



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 14/322 (4%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYR 146
           +++  +   +TY  +I      G+ +    L   M +E + PN+     +++  F    +
Sbjct: 241 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY-TYNAVIDGFCKKGK 299

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE-KRGFADFVF-VYKEMVKAGIVPNVDT 204
           +  A +VL    S G K     + ++   I E  K+G   +   ++  MV+ G  P+++ 
Sbjct: 300 IQEAYKVLRMATSQGLKFDKITYTIL---ITEHCKQGHITYALDLFDRMVENGCCPDIEA 356

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
              L+    +  ++E +   F +    G  P  +T+  +I G     R   ++ +   M 
Sbjct: 357 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 416

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G   +   Y  +I  LC+E++LEEA  L++ M    L+P E+T   L    C   +  
Sbjct: 417 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 476

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALL 380
            A  +L+ +       T DV   +VR L  +G  D +  F    L++      + +   +
Sbjct: 477 IAVSVLDRLDKRQQVHTVDV---VVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 533

Query: 381 ECCCNAGKFFLAKCILEKMADR 402
             C    ++ LA  + EK + +
Sbjct: 534 NSCYENNRYALASEMSEKFSKK 555


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 255/555 (45%), Gaps = 12/555 (2%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           A  +LV  +  + +++ A R++ +M       +   +  ++  + +  R   + + +  +
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYT---YTPIIRGLCDRGR-VGEALSLLDD 170

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  G  P+V T   LLE + ++     A++    M  KGC PN  T+ ++I G+    R
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+   L  +   G Q +   YT ++  LC   + E+   LF  M   + MP+E+T++ 
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+   C    ++ A  +LE M   G      +   ++  +C+ G+ D++  FL +   Y 
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
            SP    +  +L+  C A ++  AK +L++M  +     + ++N  I  LC+   I +A 
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L+ +M       +  TY+A V G C     + AL +F  +  +    ++I+Y+ L+ GL
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGL 467

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C  E++  A E+   M +  C+ +  +FN+L+   C    +D+AI L       G +   
Sbjct: 468 CNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 527

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ G+ K   +++ L +L  ++  G + D+  Y  +I  +S ++++++    F++
Sbjct: 528 ITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 587

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   G+ P       +L  L               +VS+  + +   Y  LI GL  E  
Sbjct: 588 VQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDF 647

Query: 668 TSQASYLLDLMLGKG 682
             +   LL  +  +G
Sbjct: 648 LKETRDLLRELCSRG 662



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/598 (21%), Positives = 251/598 (41%), Gaps = 43/598 (7%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ +     R + A RVL      G  + V  +N ++         +       + +   
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR----YGQLDAARRLIASM 139

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            + P+  T   ++  L +  R+  AL     M  +GC P+  T+ ++++ +  ++    +
Sbjct: 140 PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + +L EM   G    +  Y  II  +CRE ++++A      + +    PD ++Y  ++  
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 259

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   R +D  ++  +M+     P +  F  +VR  C  G  + ++  LE   G+  + +
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
             L                               NI I  +C+   +  A++ L  M   
Sbjct: 320 TTL------------------------------CNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              PD  +Y+  + G C+   +EDA  + +++  ++   + ++++  +  LCQ   I +A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             +   MS++GC ++  ++N L+ G CV  +VD A+    L YS      T TYT ++ G
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL---ELFYSMPCKPNTITYTTLLTG 466

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L   +R      +LA+ML + CA +V  + +L+    ++  + +       M++ G  P+
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +LL G+            ++ LVS+    D   Y+ +I  L +E    +A  +  
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586

Query: 677 LMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVSDI-LAEGLGN 728
           ++   G  P A  +      L    +    ID   +   +   P+ ++ I L EGL N
Sbjct: 587 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 644



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 219/492 (44%), Gaps = 48/492 (9%)

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           ++ LIA   + ++  ++      G   ++   T +I  LCR  +  +A R+ +       
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             D   Y  L+   C   +LD A  ++  M V    P    +  I+RGLC+ G+  E+++
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALS 166

Query: 364 FLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
            L+D     C      +  LLE  C +  F  A  +L++M  +    +  ++N+ I  +C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
               +  A E L R+      PD  +Y+  + G C    +ED   +F ++  ++ + + +
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           ++  LV   C+   +  A++V   MS +GC+ +++  NI+I  +C   +VD A +  +  
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQR---AKDLL---------------------------- 567
            S G S  T +YT ++ GL + +R   AK+LL                            
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406

Query: 568 ----VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC-ALFFNVMVKAGLVPDRETMLS 622
               +++ QM   GC +++  Y  L+     Q ++     LF+++  K    P+  T  +
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTT 462

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           LL GL +  +L   +  + +++      +   +N+L++   ++GL  +A  L++ M+  G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 683 WVPDATTHGLLV 694
             P+  T+  L+
Sbjct: 523 CTPNLITYNTLL 534


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 237/497 (47%), Gaps = 6/497 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++ +      ++ AM VL  M   G       +N +L       +   + +   K+M  
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP-KEAIGTLKKMRS 299

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PNV T + L+  L +  R   A   F  M K+G  P+  T+  +++G      + +
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE 359

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             ++L  M   GIQ +   +  +I    ++ K+++A+ +F  MR   L P+ + Y  +I+
Sbjct: 360 MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVID 419

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGY 371
            LC++  +DDA    E MI  GLTP   V+  ++ GLC   K+D++    +  L+     
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
            T   N++++  C  G+   ++ + + M    +  D  ++N  I   C   ++ +A +LL
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV   V PD  TY   + G C++   +DAL +F+++ +  +  + I+Y+ +++GL   
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +   A E++  ++K+G  L  S++NI+++GLC     D+A+R+      +     T T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++  L+K  R  +   + A     G   DV  Y ++ +++ EQ  L++    F  M +
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 611 AGLVPDRETMLSLLHGL 627
            G   D   + S++  L
Sbjct: 720 NGCSADSRMLNSIVRKL 736



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 232/534 (43%), Gaps = 8/534 (1%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +P+V + 
Sbjct: 107 RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSY 166

Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           N LL+ L + NR + AL+    M      G  P+  ++  V+ G       D + S   E
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE 226

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D GI  ++  Y+ II  LC+   +++A+ +   M    +MPD +TY  +++  C + +
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
             +A   L+ M   G+ P    +  ++  LC+ G+  E+    +        P    +  
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           LL+     G       +L+ M    I  D   +NI I    + E++ +A  +  +M    
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+   Y   +   CK  + +DA+  F Q+  + L  + I Y+ L+ GLC  +K  +A 
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E+   M   G  L++  FN +I   C   +V ++ +L  L    G      TY  ++ G 
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
               +  +   +LA M+  G   D+  Y  LI      +++ D    F  MV +G+ P+ 
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNI 586

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            T   +L GL    +          +      L+ S YNI+++GL K  LT +A
Sbjct: 587 ITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/588 (22%), Positives = 258/588 (43%), Gaps = 43/588 (7%)

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + ++ +   GG    V  +N VL    +E  G +D  +  Y EM+  GI+P+V T + ++
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKE--GDSDKAYSTYHEMLDRGILPDVVTYSSII 243

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +   ++ A++    M K G  P+  T+  ++ G  ++ +  +++  L +M   G++
Sbjct: 244 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 303

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y+ ++  LC+  +  EA ++F  M    L PD  TY  L+        L + + +
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 330 LEDMIVIGLTPTDDVF------------VD-----------------------IVRGLCE 354
           L+ M+  G+ P   VF            VD                       ++  LC+
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDS 409
            G  D+++ + E       +P    + +L+   C   K+  A+ ++ +M DR I  +   
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I   C+   + ++ +L   MV   V PD  TY+  + G C     ++A ++   + 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           +  +  D ++Y  L+ G C+V ++ +A+ +F  M  +G S +  ++NI++ GL   R+  
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  L      SGT    STY  I+ GL K     + L +   + +    L+   + I+I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            ++ +  ++ +    F      GLVPD  T   +   L +   L  +      +  +   
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
            DS M N ++  L + G  ++A   L ++  K +  +A+T   L+ SS
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 771



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/522 (23%), Positives = 227/522 (43%), Gaps = 48/522 (9%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     P   T+ 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           I+I       R+D   + LG +   G ++                               
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRV------------------------------- 125

Query: 302 DLMPDELTYEELINCLCENLRLDDANDI-LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
               D +T+  L+  LC + R  DA DI L  M  +G  P    + ++++GLC+  +  E
Sbjct: 126 ----DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQE 181

Query: 361 SVNFLE---DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
           ++  L    D  G  + P    +N +L      G    A     +M DR I  D  +++ 
Sbjct: 182 ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSS 241

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC+ + + KA E+L  MV + V+PDC TY++ + G C     ++A+   +++ +  
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           +  + ++YS L+  LC+  + TEA ++F  M+K G     +++  L+ G      + +  
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L  L   +G       +  ++    K ++    ++V ++M   G   +V  Y  +I  +
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +   + D  L+F  M+  GL P+     SL+HGL    +       I +++     L++
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +N +I+   KEG   ++  L DLM+  G  PD  T+  L+
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 207/443 (46%), Gaps = 14/443 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA---MRVL 154
           TY  ++  L   G   E   +  +M K       E  I+   + +  Y   GA   M  L
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGL----EPDIATYRTLLQGYATKGALVEMHAL 363

Query: 155 VN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           ++ M   G +    VFN+++ A  ++++     + V+ +M + G+ PNV     +++VL 
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEK-VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           ++  ++ A+  F +M  +G  PN   +  +I GL    + D +  ++ EM D GI L   
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           F+  II   C+E ++ E+ +LF +M  + + PD +TY  LI+  C   ++D+A  +L  M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
           + +G+ P    +  ++ G C V + D+++   ++      SP    +N +L+   +  + 
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             AK +   +       +  ++NI +  LC+N    +A  +   + ++ +  +  T++  
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +    K    ++A  +F   SA  LV D  +YS + E L +   + E  ++F  M +NGC
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722

Query: 509 SLSSSSFNILIYGLCVMRKVDKA 531
           S  S   N ++  L     + +A
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRA 745



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 127/323 (39%), Gaps = 40/323 (12%)

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           Y  + R     V P   TY+  +   C+    +        V  +   +D+I+++ L++G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 487 LCQVEKITEAVE-VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA---YSSG 542
           LC  ++ ++A++ V   M++ GC     S+N L+ GLC   +  +A+ L  +       G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
           +     +Y  ++ G  K   +        +ML  G   DV  Y  +I ++ +   +    
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS--------------- 647
              N MVK G++PD  T  S+LHG     Q       + K+ SD                
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 648 ----------EVLDS----------SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                     ++ DS          + Y  L+ G   +G   +   LLDLM+  G  PD 
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376

Query: 688 TTHGLLV-GSSVGEEIDSRRFAF 709
               +L+   +  E++D     F
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVF 399


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 159/677 (23%), Positives = 300/677 (44%), Gaps = 22/677 (3%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQH 94
           L ++   I S      +  +++L  +L+P  L  + +   D  +AL  F+W+     F H
Sbjct: 25  LPTQIFTILSRPRWRKDPSLKTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPH 84

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKE-RYPNVREALISLVFSFVNHYRVNGAMRV 153
           +  T+  ++L L     +   E +  +M+K    P+    L++L+       R+N A   
Sbjct: 85  SLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLL------RRMNTAAAA 138

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVFVYKEMVK---AGIVPNVDTLNYLL 209
             + +   FKLS+  +N +L  +   +    D  + +YKEM+      + PN+ TLN +L
Sbjct: 139 ADHQHQLAFKLSLTSYNRLLMCL--SRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTML 196

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
               +   +  A   F R+ +    P+  T+  ++ G   N  V+ +  +    F +  +
Sbjct: 197 NSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV----FCVMPR 252

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
                YT +I  LC   KL EA+  +  MR     P   TY  L+  LCE+ R  +A  +
Sbjct: 253 RNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSL 312

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCN 385
             +M   G  P    +  ++  LC+ G+ DE++  L +  + G   S  P NAL+   C 
Sbjct: 313 FGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCK 372

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G    A  +L  M  +K+  +  ++N  I   C  + + +A  LL +MV S + PD  T
Sbjct: 373 RGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVT 432

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G C++   + A R+FR +       D  +++  +  LC++ ++ EA ++   + 
Sbjct: 433 YNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLK 492

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           +     +  ++  LI G C   K++ A  L     +      + T+  ++ GL K  + +
Sbjct: 493 EKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQ 552

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D ++++  M        +  Y IL++ + ++          N ++ +G  P+  T  + +
Sbjct: 553 DAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFI 612

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
                  +L      + K+ ++  +LDS +YN+LIN     GL   A  +L  M G G  
Sbjct: 613 KAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCE 672

Query: 685 PDATTHGLLVGSSVGEE 701
           P   T+ +L+   V E+
Sbjct: 673 PSYLTYSILMKHLVIEK 689



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 148/645 (22%), Positives = 282/645 (43%), Gaps = 53/645 (8%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAM 151
           +  A +Y  +I  L  AG + E       M ++  +P VR   + LV +     R   A+
Sbjct: 252 RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTV-LVCALCESGRELEAL 310

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            +   M   G + +V  + V++  + +E R   + + +  EMV+ G+ P+V   N L+  
Sbjct: 311 SLFGEMRERGCEPNVYTYTVLIDYLCKEGR-MDEALKMLNEMVEKGVAPSVVPFNALIGS 369

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +   +E A+     M  K  CPN RT+  +I G      +D ++++L +M +  +  +
Sbjct: 370 YCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPD 429

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  Y  +I  LC    ++ A RLF++M      PD+ T+   + CLC   R+ +A+ ILE
Sbjct: 430 VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE 489

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAG 387
            +    +   +  +  ++ G C+ GK + + +     L ++C   +   N +++     G
Sbjct: 490 SLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEG 549

Query: 388 KFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           K   A  ++E MA   +     ++NI +  + +  +  +A E+L R++ S   P+  TY+
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           AF+   C     E+A  +  ++  + ++LDS  Y+ L+     +  +  A  V   M   
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSL--AYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           GC  S  +++IL+  L + +   +      L  + ++ +   T  ++KI  G+       
Sbjct: 670 GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITT----- 724

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD---RETML 621
              V+  +M   GC  ++  Y  LI  + +  +L      ++ M + G+ P      ++L
Sbjct: 725 ---VLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLL 781

Query: 622 S-------------LLHGLADGSQL-HLVS---------SGINKLVSDSEV--------- 649
           S             LL  + + S L HL S           +NK  +++           
Sbjct: 782 SSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYN 841

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            D   + +LI+GL K G   Q S LL+LM   G      T+ +L+
Sbjct: 842 YDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 266/597 (44%), Gaps = 32/597 (5%)

Query: 117 GLCQNMVKERYPNV------REAL--ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G C+N   ER   V      R A+   +L+       +++ A+     M   G   +V  
Sbjct: 233 GYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRT 292

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           + V++ A+ E  R   + + ++ EM + G  PNV T   L++ L +  R++ AL     M
Sbjct: 293 YTVLVCALCESGREL-EALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEM 351

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            +KG  P+   F  +I        ++D+V +LG M    +   +  Y  +I   CR   +
Sbjct: 352 VEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSM 411

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + A+ L   M    L PD +TY  LI+ LCE   +D A+ +   MI  G +P    F   
Sbjct: 412 DRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAF 471

Query: 349 VRGLCEVGKFDESVNFLED-KCGYVTS---PHNALLECCCNAGKFFLAKCILEKM-ADRK 403
           +  LC +G+  E+   LE  K  +V +    + AL++  C AGK   A  + ++M A+  
Sbjct: 472 MVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC 531

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + +  ++N+ I  L +  +++ A  L+  M    V P   TY+  V    K  +++ A  
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANE 591

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++ +     + ++Y+  ++  C   ++ EA E+   +   G  L S  +N+LI    
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
            M  +D A  +    + +G   +  TY+ +M  LV  +  K+              LDV 
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKE--------GSNPVGLDVS 703

Query: 584 AYCILIQSMSEQNKLK--DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
              I + +    +K+      + F  M + G VP+  T   L++GL    +L++  S  +
Sbjct: 704 LTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYH 763

Query: 642 KL----VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +    +S SE++    +N L++   K G+  +A  LLD M+    +    ++ LL+
Sbjct: 764 HMREGGISPSEII----HNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI 816



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/471 (21%), Positives = 195/471 (41%), Gaps = 10/471 (2%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           ++ +      TY  +I  L   G V+    L + M+++ +   +    + +       RV
Sbjct: 422 VESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRV 481

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
             A ++L ++     K +   +  ++    +  +       ++K M+    +PN  T N 
Sbjct: 482 GEAHQILESLKEKHVKANEHAYTALIDGYCKAGK-IEHAASLFKRMLAEECLPNSITFNV 540

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           +++ L +  +++ A+     M K    P   T+ I+++ ++     D +  IL  +   G
Sbjct: 541 MIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSG 600

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL-CENLRLDDA 326
            Q  +  YT  I   C + +LEEA  +   ++   ++ D   Y  LIN   C  L LD A
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGL-LDSA 659

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
             +L  M   G  P+   +  +++ L       E  N      G   S  N  ++     
Sbjct: 660 FGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSN----PVGLDVSLTNISVDNTDIW 715

Query: 387 GK--FFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            K  F +   + EKMA+   + + ++++  I  LC+   +  A+ L   M    + P   
Sbjct: 716 SKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEI 775

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            +++ +   CKL  + +A+ +   +   S +    SY  L+ GL +     +A  VFC +
Sbjct: 776 IHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSL 835

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            + G +    ++ +LI GL     VD+   L +L   +G      TY+ +M
Sbjct: 836 LRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 93/458 (20%), Positives = 179/458 (39%), Gaps = 22/458 (4%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A R+   M   GF      FN  +  +    R   +   + + + +  +  N     
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGR-VGEAHQILESLKEKHVKANEHAYT 504

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++   +  +IE A   F+RM  + C PNS TF ++I GL    +V D++ ++ +M   
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            ++  L  Y  ++  + +E   + A  +   + +    P+ +TY   I   C   RL++A
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
            +++  +   G+     ++  ++     +G  D +   L    G    P           
Sbjct: 625 EEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTY------ 678

Query: 387 GKFFLAKCILEKM----ADRKIADCDSWNIPIRWLCENEEIRKAYE------LLGRMVVS 436
               +   ++EK     ++    D    NI +    +N +I    +      L  +M   
Sbjct: 679 -SILMKHLVIEKHKKEGSNPVGLDVSLTNISV----DNTDIWSKIDFGITTVLFEKMAEC 733

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
             VP+  TYS  + G CK+     A  ++  +    +    I ++ L+   C++    EA
Sbjct: 734 GCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEA 793

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           V +   M +        S+ +LI GL      +KA  +       G +Y    +  ++ G
Sbjct: 794 VTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDG 853

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           L K         +L  M   GC L  E Y +L+Q ++ 
Sbjct: 854 LAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 152/643 (23%), Positives = 297/643 (46%), Gaps = 11/643 (1%)

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
           +LSP H++++L +  +  +A  +F   +    + H+A  Y  ++ +L  A  V  +  + 
Sbjct: 7   SLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIV 66

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVVLGAIVE 178
           + +  +      +  +S++ ++  +   + A+ V   M    G +  +  +N +L A VE
Sbjct: 67  ELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVE 126

Query: 179 EKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            K+    + +F Y E   AG+ PN+ T N L+++  +    E A      M K+G  P+ 
Sbjct: 127 AKQWVKVESLFAYFET--AGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDV 184

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-K 296
            ++  VI  L    ++DD++ +  EM +  +  +++ Y  +I    +E   + A++L+ K
Sbjct: 185 FSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDK 244

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           ++    + P+  T+  +I+ L +  R+DD   I + M           +  ++ GLC+ G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEG 304

Query: 357 KFD--ESV--NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
             D  ESV    +E K       +N +L   C  GK   +  +   M  R   +  S+NI
Sbjct: 305 NVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNI 364

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I+ L EN +I +A  +   M       D  TY  F+ G C       AL V ++V ++ 
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKG 424

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV-MRKVDKA 531
             LD  +Y+ +++ LC+  ++ EA  +   MSK+G  L+S   N LI GL    R  D +
Sbjct: 425 GHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDAS 484

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + +R +   +G   T  +Y  ++ GL +  +  +    + +ML  G   D++ Y IL+  
Sbjct: 485 LLMRGMG-KNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGG 543

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +    K++     ++  +++GL PD      L+HGL    +L    + +  +   +   +
Sbjct: 544 LCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              YN L+ G +K   +++A+ +   M   G  PD  ++  ++
Sbjct: 604 LVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTIL 646



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 213/484 (44%), Gaps = 41/484 (8%)

Query: 219 ESALDQFRRMHKK-GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + ALD F+RM +  GC P  R++  ++   +   +     S+       G+   L  Y  
Sbjct: 95  DRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I M C++ + E+A      M      PD  +Y  +IN L +  +LDDA ++ ++M    
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR 214

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVT-SPHNALLECCCNAGKFFLA 392
           + P    +  ++ G  +      ++      LED   Y     HN ++          L+
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISG--------LS 266

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
           KC        ++ DC                    ++  RM  +    D  TYS+ + G 
Sbjct: 267 KC-------GRVDDC-------------------LKIWDRMKQNEREKDLYTYSSLIHGL 300

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C   N + A  VF ++  +   +D ++Y+ ++ G C+  KI E++E++  M +   S++ 
Sbjct: 301 CDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNI 359

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            S+NILI GL    K+D+A  +  L  + G +   +TY   + GL         L V+ +
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           +  +G  LDV AY  +I  + ++ +L++ +     M K G+  +     +L+ GL   S+
Sbjct: 420 VESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L   S  +  +  +  +     YNILI GL + G   +AS  +  ML  G  PD  T+ +
Sbjct: 480 LSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSI 539

Query: 693 LVGS 696
           L+G 
Sbjct: 540 LLGG 543



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/553 (20%), Positives = 248/553 (44%), Gaps = 14/553 (2%)

Query: 76  LSSALKIFKWVSIQKRFQH--TA------DTYCKMILKLGLAGNVEEMEGLCQNMVKERY 127
           L++ ++  +WV ++  F +  TA       TY  +I         E+  G    M KE +
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGF 180

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
                +  +++       +++ A+ +   M+       V  +N+++   ++EK       
Sbjct: 181 KPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQ 240

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
              K +  + + PNV T N ++  L +  R++  L  + RM +     +  T+  +I GL
Sbjct: 241 LWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGL 300

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
                VD + S+  E+ +    +++  Y  ++   CR  K++E++ L+++M   + + + 
Sbjct: 301 CDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NI 359

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-- 365
           ++Y  LI  L EN ++D+A  I   M   G    +  +   + GLC  G  ++++  +  
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 366 -EDKCGYV-TSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
            E K G++    + ++++C C   +   A  ++++M+   +  +    N  I  L  +  
Sbjct: 420 VESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  L+  M  +  +P   +Y+  + G C+   + +A    +++    L  D  +YS 
Sbjct: 480 LSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSI 539

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ GLC+  KI  A+E++    ++G        NILI+GLC + K+D A+ + +      
Sbjct: 540 LLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +    TY  +M G  K++ +    V+   M   G   D+ +Y  +++ +   +++    
Sbjct: 600 CTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAI 659

Query: 603 LFFNVMVKAGLVP 615
            FF+     G+ P
Sbjct: 660 EFFDDARNHGIFP 672



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 128/564 (22%), Positives = 255/564 (45%), Gaps = 28/564 (4%)

Query: 16  KWVNLTSCISSLSCANTIP-LSSETDMIK-SHQTTDYEAKIQSL----RHNLSPD----- 64
           +WV + S  +    A   P L +   +IK S +  ++E     L    +    PD     
Sbjct: 129 QWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYS 188

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG--LCQNM 122
            +I  L  T  L  AL++F  +S ++R     D  C  IL  G     +      L   +
Sbjct: 189 TVINDLAKTGKLDDALELFDEMS-ERRV--APDVTCYNILIDGFLKEKDHKMAMQLWDKL 245

Query: 123 VKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           +++   YPNV+   I ++       RV+  +++   M     +  +  ++ ++  + +E 
Sbjct: 246 LEDSSVYPNVKTHNI-MISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDE- 303

Query: 181 RGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            G  D    V+ E+V+     +V T N +L       +I+ +L+ +R M ++    N  +
Sbjct: 304 -GNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVS 361

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           + I+IKGL+ N ++D++  I   M   G   + + Y   I  LC    + +A+ + + + 
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVE 421

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           +     D   Y  +I+CLC+  RL++A++++++M   G+     V   ++ GL    +  
Sbjct: 422 SKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLS 481

Query: 360 ESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           ++   +    ++ C      +N L+   C AGKF  A   +++M +  +  D  +++I +
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILL 541

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC + +I  A EL  + + S + PD   ++  + G C +   +DA+ V   +  ++  
Sbjct: 542 GGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + ++Y+ L+EG  +V     A  ++  M K G      S+N ++ GLC+  +V  AI  
Sbjct: 602 ANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEF 661

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLV 558
              A + G   T  T+  ++  +V
Sbjct: 662 FDDARNHGIFPTVYTWNILVRAVV 685



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 11/173 (6%)

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           RA D+   + ++   GC   + +Y  L+ +  E  +       F     AG+ P+ +T  
Sbjct: 96  RALDVFKRMREIF--GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            L+       +       +N +  +    D   Y+ +IN L K G    A  L D M  +
Sbjct: 154 VLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSER 213

Query: 682 GWVPDATTHGLLVGSSVGEEIDSR-------RFAFDSSSFPD-SVSDILAEGL 726
              PD T + +L+   + E+ D +       +   DSS +P+    +I+  GL
Sbjct: 214 RVAPDVTCYNILIDGFLKEK-DHKMAMQLWDKLLEDSSVYPNVKTHNIMISGL 265


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 229/473 (48%), Gaps = 12/473 (2%)

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K+G  P++ T   ++KG+   + + D+V +  EM + G+  +   Y  +I  LC+  K  
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
            AI+L + M+  +   D  TY  +I+ LC++    +A D+  +MI  G+ P   V+  ++
Sbjct: 130 LAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA 405
            GLC  G+  E++ F ++  G   S     +N+L+     AG +      L  M DR  +
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++ I I  LC+  ++ +A ++L  M      PD  TY+  + G C +   EDA ++
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  ++ + + L+  SY+ L+ G C+ +KI EA  +F  M   G   S+ ++N LI  LC 
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALD 581
             +V  A +L     + G     STY  ++ GL K   L+ A DL   + +   +    +
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP---N 425

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +E + IL+  M    KL++    F+ + K GL PD      L++GL +   L      + 
Sbjct: 426 IEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLW 485

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++     + DS  +N++I  L KE    +A  LL+ M  + + PD     +L+
Sbjct: 486 QMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 215/469 (45%), Gaps = 9/469 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V V  +V G  +E   G  D V ++ EM + G+  +  T   L+  L +  +   A+  
Sbjct: 77  AVTVTTLVKGVWME--NGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K  C  +  T+ ++I  L  +    +++ +  EM   GI  ++  Y+ ++  LCR
Sbjct: 135 HEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +L+EA+  FK M    +  D  TY  LI+ L       +    L  M+  G +P    
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           F  ++ GLC+ GK  E+   LE        P    +N L+   C  G+   A  + E +A
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 401 DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           DR I  +  S+NI I   C++++I +A+ L   M    + P   TY+  +   C+     
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A ++F ++      L   +Y  L++GLC+   + EA+++F  + K     +   F+IL+
Sbjct: 374 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G+C   K+++A +       +G    T  Y  ++ GL       + + +L QM  +GC 
Sbjct: 434 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 493

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            D   + ++IQ++ ++N++ +       M      PD E + S+L  LA
Sbjct: 494 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD-EAVTSMLLCLA 541



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 8/355 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMV 194
           SL+       R+  A+     M   G    V  +N ++  +   + G + +  +    MV
Sbjct: 186 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL--SRAGLWKEVTWFLNLMV 243

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G  P+  T   L++ L +  ++  A      MH KG  P+  T+  ++ GL    +++
Sbjct: 244 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE 303

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D+  +   + D GI+L +  Y  +I   C++ K++EA RLF+ MR   L P  +TY  LI
Sbjct: 304 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
             LC++ R+  A  +  +M   G       +  ++ GLC+ G  +E+++  +        
Sbjct: 364 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK 423

Query: 375 PH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           P+    + LL+  C AGK   A    ++++   +  D  ++NI I  LC    + +A +L
Sbjct: 424 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           L +M     +PD  T++  +    K     +A+++  ++  ++   D    S L+
Sbjct: 484 LWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 39/199 (19%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK- 124
           LI  L  +  + +A K+F  +    +F   + TYC ++  L   G++EE   L Q++ K 
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLS-TYCVLLDGLCKNGHLEEAIDLFQSIKKT 420

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           E  PN+       VFS +    ++G  R                     G + E  + F 
Sbjct: 421 EHKPNIE------VFSIL----LDGMCRA--------------------GKLEEAWKQF- 449

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
                  E+ K G+ P+    N L+  L     +  A+    +M +KGC P+S TF ++I
Sbjct: 450 ------DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 503

Query: 245 KGLIANSRVDDSVSILGEM 263
           + L+  + + +++ +L EM
Sbjct: 504 QNLLKENEIHEAIQLLEEM 522


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/579 (24%), Positives = 252/579 (43%), Gaps = 46/579 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAG--IVPNVDTLNYLLEVLFETNR 217
           G    V   N +L A V  +R   AD  F        G  I PN+ T N +L  L     
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE------ 271
           ++ A+  F  + ++G  P+  T+  ++ GL  + ++D+++ +L EM + G+Q +      
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 272 ------------------------------LSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                                         L+ Y  ++  LC+  + +EA  ++  M A 
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           +   D +TY  LI+ LC +  +D A  +  DM+  GL     V+  +++G CEVG+  E+
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 362 VNFLEDKCGYV----TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIR 415
             F  D  G+      + +N + +   ++G    A  +L+++ +      D  ++   I 
Sbjct: 354 WKFW-DSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIH 412

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LCEN    +A+E+L     S    D  +YS+ +   CK     DA  V++ +       
Sbjct: 413 GLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKP 472

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +S  Y+ L+ G C+V KI +A++++  M+ NGC  +  ++N LI GLC   K  +A  L 
Sbjct: 473 NSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLT 532

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TY  ++ GL + ++    L +  ++L  G  +DV  + ILI  +   
Sbjct: 533 KEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSA 592

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+ +    +  M +    P+  T  +L+ G  +   +   +S    ++ +    D   Y
Sbjct: 593 GKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTY 652

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N  I GL     T +   LL+ +L  G +P   T  +LV
Sbjct: 653 NTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILV 691



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 127/575 (22%), Positives = 248/575 (43%), Gaps = 43/575 (7%)

Query: 59  HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGL 118
           HN   D  +R     +D  +        +  +R      TY  ++  L   G+V+    L
Sbjct: 122 HNTLLDAFVRA-RRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSL 180

Query: 119 CQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE 178
             ++ +      R    +L+     H +++ A+ +L  M + G +     +N +L     
Sbjct: 181 FSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFR 240

Query: 179 EKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
               F   + V++++V+  G  PN+ T   +L+ L +  R + A + + RM       ++
Sbjct: 241 TGM-FEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADT 299

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-- 295
            T+ I+I GL  +  VD +  +  +M   G+ L++S Y  +I   C   +  EA + +  
Sbjct: 300 VTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDS 359

Query: 296 ------KMMRALDLM---------------------------PDELTYEELINCLCENLR 322
                 + +   ++M                           PD++T+  LI+ LCEN  
Sbjct: 360 TGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGY 419

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNA 378
            + A +ILED    G       +  ++   C+ G+  ++     N ++D C   +  +NA
Sbjct: 420 ANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNA 479

Query: 379 LLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C   K   A K  +E  ++       ++N  I  LC+ E+ ++A  L   M+   
Sbjct: 480 LINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERG 539

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             PD  TY++ + G C+    + ALR++ ++    L +D + ++ L+ GLC   K+ EA 
Sbjct: 540 FKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAF 599

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            ++  M +  CS +  ++N L+ G   +  +DKA  L +    +G      TY   + GL
Sbjct: 600 CIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGL 659

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
               R  + +++L ++L  G    V  + IL++++
Sbjct: 660 CSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 177/377 (46%), Gaps = 7/377 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           VY +MVKAG+V +V   N L++   E  R   A   +      G      T+ I+ KGL+
Sbjct: 321 VYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGI-RQITTYNIMTKGLL 379

Query: 249 ANSRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
            +  V ++  +L ++  D     +   +  +I  LC       A  + +  R      D 
Sbjct: 380 DSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDV 439

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLE 366
            +Y  +IN  C++ R  DAN++ ++M+  G  P   V+  ++ G C V K ++++  ++E
Sbjct: 440 FSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE 499

Query: 367 ---DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
              + C      +N L++  C A K+  A  + ++M +R    D  ++   IR LC +++
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  +   ++ + +  D   ++  + G C     ++A  ++ ++  ++   + ++Y+ 
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++G  ++  I +A  ++  +  NG      ++N  I GLC   +  + + L +   ++G
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 679

Query: 543 TSYTTSTYTKIMLGLVK 559
              T  T++ ++  ++K
Sbjct: 680 IMPTVITWSILVRAVIK 696



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/330 (20%), Positives = 137/330 (41%), Gaps = 50/330 (15%)

Query: 38  ETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTAD 97
           E D   S     +   I  L  N   +    +L++  +    L +F + S+  RF     
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF----- 449

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
             CK        G   +   + +NMVK+          +L+  F    ++N A+++ + M
Sbjct: 450 --CK-------DGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM 500

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            S G   ++  +N ++  + + ++ + +   + KEM++ G  P++               
Sbjct: 501 TSNGCCPTIITYNTLIDGLCKAEK-YQEASSLTKEMLERGFKPDI--------------- 544

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
                               RT+  +I+GL  + +VD ++ I  E+ D G+Q+++  +  
Sbjct: 545 --------------------RTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC   K++EA  ++  M+  +  P+ +TY  L++   E   +D A  +   ++  G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           L P    +   ++GLC   +  E V  L +
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNE 674


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 131/546 (23%), Positives = 254/546 (46%), Gaps = 22/546 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++ +      ++ AM VL  M   G       +N +L       +   + +   K+M  
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP-KEAIGTLKKMRS 299

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PNV T + L+  L +  R   A   F  M K+G  P+  T+  +++G      + +
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE 359

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             ++L  M   GIQ +   +  +I    ++ K+++A+ +F  MR   L P+ + Y  +I+
Sbjct: 360 MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVID 419

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGY 371
            LC++  +DDA    E MI  GLTP   V+  ++ GLC   K+D++    +  L+     
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
            T   N++++  C  G+   ++ + + M    +  D  ++N  I   C   ++ +A +LL
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV   V PD  TY   + G C++   +DAL +F+++ +  +  + I+Y+ +++GL   
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +   A E++  ++K+G  L  S++NI+++GLC     D+A+R+      +     T T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++  L+K  R  +   + A     G   DV  Y ++ +++ EQ  L++    F  M +
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G   D                  +++S + KL+   ++  +  Y  +I+        S 
Sbjct: 720 NGCSADSR----------------MLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763

Query: 671 ASYLLD 676
           AS+LL+
Sbjct: 764 ASFLLE 769



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 232/534 (43%), Gaps = 8/534 (1%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +P+V + 
Sbjct: 107 RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSY 166

Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           N LL+ L + NR + AL+    M      G  P+  ++  V+ G       D + S   E
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE 226

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D GI  ++  Y+ II  LC+   +++A+ +   M    +MPD +TY  +++  C + +
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
             +A   L+ M   G+ P    +  ++  LC+ G+  E+    +        P    +  
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           LL+     G       +L+ M    I  D   +NI I    + E++ +A  +  +M    
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+   Y   +   CK  + +DA+  F Q+  + L  + I Y+ L+ GLC  +K  +A 
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E+   M   G  L++  FN +I   C   +V ++ +L  L    G      TY  ++ G 
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
               +  +   +LA M+  G   D+  Y  LI      +++ D    F  MV +G+ P+ 
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNI 586

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            T   +L GL    +          +      L+ S YNI+++GL K  LT +A
Sbjct: 587 ITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/588 (22%), Positives = 258/588 (43%), Gaps = 43/588 (7%)

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + ++ +   GG    V  +N VL    +E  G +D  +  Y EM+  GI+P+V T + ++
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKE--GDSDKAYSTYHEMLDRGILPDVVTYSSII 243

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +   ++ A++    M K G  P+  T+  ++ G  ++ +  +++  L +M   G++
Sbjct: 244 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 303

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y+ ++  LC+  +  EA ++F  M    L PD  TY  L+        L + + +
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 330 LEDMIVIGLTPTDDVF------------VD-----------------------IVRGLCE 354
           L+ M+  G+ P   VF            VD                       ++  LC+
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDS 409
            G  D+++ + E       +P    + +L+   C   K+  A+ ++ +M DR I  +   
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I   C+   + ++ +L   MV   V PD  TY+  + G C     ++A ++   + 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           +  +  D ++Y  L+ G C+V ++ +A+ +F  M  +G S +  ++NI++ GL   R+  
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  L      SGT    STY  I+ GL K     + L +   + +    L+   + I+I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            ++ +  ++ +    F      GLVPD  T   +   L +   L  +      +  +   
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
            DS M N ++  L + G  ++A   L ++  K +  +A+T   L+ SS
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 771



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 196/429 (45%), Gaps = 9/429 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI-LEDM 333
           Y  +I   CR  +L+        +       D +T+  L+  LC + R  DA DI L  M
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---DKCGYVTSP----HNALLECCCNA 386
             +G  P    + ++++GLC+  +  E++  L    D  G  + P    +N +L      
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G    A     +M DR I  D  +++  I  LC+ + + KA E+L  MV + V+PDC TY
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           ++ + G C     ++A+   +++ +  +  + ++YS L+  LC+  + TEA ++F  M+K
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G     +++  L+ G      + +   L  L   +G       +  ++    K ++   
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            ++V ++M   G   +V  Y  +I  + +   + D  L+F  M+  GL P+     SL+H
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL    +       I +++     L++  +N +I+   KEG   ++  L DLM+  G  P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514

Query: 686 DATTHGLLV 694
           D  T+  L+
Sbjct: 515 DIITYNTLI 523



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 207/443 (46%), Gaps = 14/443 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA---MRVL 154
           TY  ++  L   G   E   +  +M K       E  I+   + +  Y   GA   M  L
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGL----EPDIATYRTLLQGYATKGALVEMHAL 363

Query: 155 VN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           ++ M   G +    VFN+++ A  ++++     + V+ +M + G+ PNV     +++VL 
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEK-VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           ++  ++ A+  F +M  +G  PN   +  +I GL    + D +  ++ EM D GI L   
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           F+  II   C+E ++ E+ +LF +M  + + PD +TY  LI+  C   ++D+A  +L  M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
           + +G+ P    +  ++ G C V + D+++   ++      SP    +N +L+   +  + 
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             AK +   +       +  ++NI +  LC+N    +A  +   + ++ +  +  T++  
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +    K    ++A  +F   SA  LV D  +YS + E L +   + E  ++F  M +NGC
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722

Query: 509 SLSSSSFNILIYGLCVMRKVDKA 531
           S  S   N ++  L     + +A
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRA 745



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 4/272 (1%)

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           Y  + R     V P   TY+  +   C+    +        V  +   +D+I+++ L++G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 487 LCQVEKITEAVE-VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA---YSSG 542
           LC  ++ ++A++ V   M++ GC     S+N L+ GLC   +  +A+ L  +       G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
           +     +Y  ++ G  K   +        +ML  G   DV  Y  +I ++ +   +    
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
              N MVK G++PD  T  S+LHG     Q       + K+ SD    +   Y+ L+N L
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K G +++A  + D M  +G  PD  T+  L+
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 227/469 (48%), Gaps = 6/469 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN ++G++V+ K  +   + ++K+M   GI P++ TLN L+       ++  +     ++
Sbjct: 13  FNKIVGSLVKMKH-YPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKI 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  PN+ T   ++KGL     V  S+    ++   G Q++   Y  ++  LC+  + 
Sbjct: 72  LKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGET 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A++L +M+      P+ + Y  +I+ LC++  +++A D+  +M   G+ P    +  +
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C  G+  E+   L +      +P    +  L++  C  GK   AK +L  M    +
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  S+N  +   C   E++ A ++   MV   V P+  +Y+  +   CK    ++A+ 
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           + R+V  +++V ++++YS L++G C++ +IT A+++   M   G      ++  L+  LC
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             + +DKA  L       G      TYT ++ GL K  R K+   +   +LV+GC ++V 
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            Y ++I  + ++  L +     + M + G +PD  T   ++  L +  Q
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQ 480



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 204/467 (43%), Gaps = 50/467 (10%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  I+  L +      AI LFK M+   + PD  T   LINC C   ++  +  +L  ++
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCN 385
            +G  P       +++GLC  G+  +S++F +         D+  Y T     LL   C 
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT-----LLNGLCK 127

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G+   A  +L  + DR    +   +N  I  LC+++ + +AY+L   M    + P+  T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 445 YSAFVLGKCKLCNYEDALRVFRQ---------VSAQSLVLDS------------------ 477
           YS  + G C      +A  +  +         V   ++++D+                  
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 478 --------ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                   +SY+ L++G C + ++  A ++F  M + G + +  S+NI+I  LC  ++VD
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A+ L            T TY+ ++ G  KL R    L +L +M   G   DV  Y  L+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            ++ +   L      F  M + G+ P++ T  +L+ GL  G +          L+     
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           ++   YN++I+GL KEG+  +A  +   M   G +PDA T  +++ S
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRS 474



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 158/349 (45%), Gaps = 45/349 (12%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    LAG + E  GL   M+ K   PNV    I L+ +     +V  A  +L  
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTI-LMDALCKEGKVKEAKNLLAV 245

Query: 157 MNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           M   G K +V  +N ++      G +   K+ F         MV+ G+ PNV + N +++
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMF-------HTMVQKGVNPNVYSYNIMID 298

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
            L ++ R++ A++  R +  K   PN+ T+  +I G     R+  ++ +L EM+  G   
Sbjct: 299 RLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPA 358

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           ++  YT ++  LC+   L++A  LF  M+   + P++ TY  LI+ LC+  R  +A  + 
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLF 418

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
           + ++V G       +  ++ GLC+ G  DE++           +  + + E  C      
Sbjct: 419 QHLLVKGCRINVWTYNVMISGLCKEGMLDEAL-----------AMKSKMEENGC------ 461

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                        I D  ++ I IR L E ++  KA +LL  M+   ++
Sbjct: 462 -------------IPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 168/363 (46%), Gaps = 5/363 (1%)

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGK 388
           M+++  TP    F  IV  L ++  +  +++  +        P     N L+ C C+ G+
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              +  +L K+       +  + N  ++ LC   E++K+     ++V      D  +Y+ 
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK+     AL++ R +  +S   + + Y+ +++GLC+ + + EA +++  M   G
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              +  +++ LIYG C+  ++ +A  L +       +    TYT +M  L K  + K+  
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +LA M  EG   +V +Y  L+       ++++    F+ MV+ G+ P+  +   ++  L
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               ++    + + +++  + V ++  Y+ LI+G  K G  + A  LL  M  +G   D 
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360

Query: 688 TTH 690
            T+
Sbjct: 361 VTY 363



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 39/261 (14%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREA 133
           ++ +A ++F  + +QK       +Y  MI +L  +  V+E   L + ++ K   PN    
Sbjct: 270 EVQNAKQMFHTM-VQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTV-T 327

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
             SL+  F    R+  A+ +L                                    KEM
Sbjct: 328 YSSLIDGFCKLGRITSALDLL------------------------------------KEM 351

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
              G   +V T   LL+ L +   ++ A   F +M ++G  PN  T+  +I GL    R 
Sbjct: 352 YHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRH 411

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            ++  +   +   G ++ +  Y  +I  LC+E  L+EA+ +   M     +PD +T+E +
Sbjct: 412 KNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEII 471

Query: 314 INCLCENLRLDDANDILEDMI 334
           I  L E  + D A  +L +MI
Sbjct: 472 IRSLFEKDQNDKAEKLLHEMI 492


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 231/506 (45%), Gaps = 44/506 (8%)

Query: 196 AGIVPNVDTLNYLLEVLFETNR--IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           + I P+V TL  L+     +N      A      M K G  PN  TF  ++ GL + +++
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D+V +  EM  +G + ++  Y+ II  LC+      AI+L K M      P+ + Y  +
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+ LC++  + +A + L +M+  G++P    +  I+ G C +G+ +E+ +  +       
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
            P     N L++     G    A+C+ E M ++ +  + +++N  +   C   ++ +A +
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L   MV     P   +Y+  + G CK    ++A  +  ++S ++L  D+++YS L++G C
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           Q  +  +A ++   M   G      +++I++ GLC    +D+A  L              
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFEL-------------- 349

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC-ALFFNV 607
                   L  +Q +K                ++  Y ILIQ M    KL+    LF N+
Sbjct: 350 --------LKAMQESK-------------IEPNIFIYTILIQGMCNFGKLEAARELFSNL 388

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
            VK G+ PD  T   ++ GL  G   +        +     + +S  YN++I G  + G 
Sbjct: 389 FVK-GIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLL 693
           TS A  L++ M+G+G+  D++T  +L
Sbjct: 448 TSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 228/523 (43%), Gaps = 49/523 (9%)

Query: 129 NVREALISLV-----FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
           N+R  + +L      F   NH   + A  VL NM   G + +   F+ +L  +   K   
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGL-SSKAKI 63

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            D V ++ EMVK G  P+V T + ++  L +      A+   ++M +KGC PN   +  +
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I  L  +  + +++  L EM + GI   +  Y+ I+   C   +  EA  LFK M   ++
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           MPD +T+  L++ L +   + +A  + E MI  G+ P  + +  ++ G C   + DE+  
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
                        N ++   C                        S+NI I+  C++  I
Sbjct: 244 LF-----------NIMVRKGC-------------------APSVRSYNILIKGHCKSGRI 273

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A  LL  M   ++ PD  TYS  + G C+    +DA ++  ++ +  L+ D ++YS +
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++GLC+   + EA E+   M ++    +   + ILI G+C   K++ A  L S  +  G 
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TYT ++ GL+K   + +   +   M V GC  +   Y ++IQ         +   
Sbjct: 394 QPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453

Query: 604 FFNVMVKAGLVPDRET--MLS-----------LLHGLADGSQL 633
               MV  G   D  T  MLS            +HG + G ++
Sbjct: 454 LIEEMVGRGFSADSSTFQMLSDLESRDEIISLFMHGSSQGRKM 496



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 210/457 (45%), Gaps = 18/457 (3%)

Query: 276 TCIIPMLCRENK--LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           T +I   C  N      A  +   M  L L P+ +T+  L+N L    ++ DA  + ++M
Sbjct: 14  TILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEM 73

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKF 389
           + +G  P    +  I+ GLC++G    ++  L    E  C      ++ +++  C     
Sbjct: 74  VKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLI 133

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A   L +M +R I+ +  +++  +   C      +A  L  +MV  +V+PD  T++  
Sbjct: 134 TEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNIL 193

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           V G  K     +A  VF  +  + +  +  +Y+ L++G C   ++ EA ++F  M + GC
Sbjct: 194 VDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGC 253

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           + S  S+NILI G C   ++D+A  L +       +  T TY+ +M G  +  R +D   
Sbjct: 254 APSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQK 313

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L +M   G   D+  Y I++  + +Q  L +       M ++ + P+      L+ G+ 
Sbjct: 314 LLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMC 373

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
           +  +L       + L       D   Y ++I+GL K GL+++A  L   M   G +P++ 
Sbjct: 374 NFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSC 433

Query: 689 THGLLV--------GSSVG---EEIDSRRFAFDSSSF 714
           T+ +++         S+ G   EE+  R F+ DSS+F
Sbjct: 434 TYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 179/396 (45%), Gaps = 36/396 (9%)

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
            E ME L + + +   PNV     S++  F N  R N A  +   M           FN+
Sbjct: 134 TEAMEFLSEMVNRGISPNVV-TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           ++  + +E     +   V++ M++ G+ PNV+T N L++     ++++ A   F  M +K
Sbjct: 193 LVDGLSKEGM-ILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK 251

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           GC P+ R++ I+IKG   + R+D++  +L EM    +  +   Y+ ++   C++ + ++A
Sbjct: 252 GCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 311

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
            +L + MR+  L+PD +TY  +++ LC+   LD+A ++L+ M    + P   ++  +++G
Sbjct: 312 QKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQG 371

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
           +C  GK + +     +                         K I          D  ++ 
Sbjct: 372 MCNFGKLEAARELFSN----------------------LFVKGIQ--------PDVVTYT 401

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           + I  L +     +A EL   M V   +P+  TY+  + G  +  +  +A R+  ++  +
Sbjct: 402 VMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR 461

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
               DS ++  L +    +E   E + +F   S  G
Sbjct: 462 GFSADSSTFQMLSD----LESRDEIISLFMHGSSQG 493


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 161/728 (22%), Positives = 296/728 (40%), Gaps = 105/728 (14%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK- 124
           L R      + ++AL  F+W++ +  F+HTAD++  ++  L       + E L  +M+  
Sbjct: 60  LFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNC 119

Query: 125 -----------------ERYPNVREALISLVFSF----VNHYRVNGAM-RVLVNMNSGGF 162
                             R  + R AL    ++F    +  + +   M RV   +   G 
Sbjct: 120 SDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGL 179

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN---------------- 206
                 +N ++ +  +E        + ++ +++ G+ P   T N                
Sbjct: 180 LPDTVTYNTMIKSYCKEGDLTTAHRY-FRLLLEGGLEPETFTCNALVLGYCRTGELRKAC 238

Query: 207 -------------------YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
                               L++ L +   +  AL  F  M + GC PN R F  +I GL
Sbjct: 239 WLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGL 298

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
             + RV D+  +   M   G+   +  Y  +I    +  ++ +A+++ ++M      PD+
Sbjct: 299 CKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 358

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----N 363
            TY  LI  LC+  + ++A ++L + +  G TPT   F +++ G C   KFD+++     
Sbjct: 359 WTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNK 417

Query: 364 FLEDKC---------------------------------GYVTS--PHNALLECCCNAGK 388
            +  KC                                 G V +   + ++++  C +GK
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477

Query: 389 FFLAKCILEKMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
             +A  +L KM +R     ++W  N  +  L +++++ KA  LL +M    ++P+  TY+
Sbjct: 478 VDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYT 536

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             + G+C   ++++A R+F  +    L  D  +Y+ L + LC   K   A E +  + + 
Sbjct: 537 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAGRAEEAYSFIVRK 593

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G +L+   +  LI G       D A  L       G +  + TY+ ++  L K +R  + 
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L +L QM + G    + AY ILI  M  + K       +N M  +G  P   T    ++ 
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                +L      I K+  +    D   YNILI+G    G   +A   L  M+G    P+
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773

Query: 687 ATTHGLLV 694
             T+ LL+
Sbjct: 774 YWTYCLLL 781



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 148/626 (23%), Positives = 279/626 (44%), Gaps = 31/626 (4%)

Query: 76  LSSALKIFKWVSIQKRFQHTAD-TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           ++ ALKI +   ++K   H  D TY  +I  L      EE E L  N VKE +       
Sbjct: 339 MNDALKIKEL--MEKNGCHPDDWTYNTLIYGL-CDQKTEEAEELLNNAVKEGFTPTVVTF 395

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +L+  +    + + A+R+   M S   KL + VF  ++ +++++ R   +   +  E+ 
Sbjct: 396 TNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR-LKEAKELLNEIS 454

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G+VPNV T   +++   ++ +++ AL+  + M + GC PN+ T+  ++ GL+ + ++ 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++++L +M   GI   +  YT ++   C E+  + A RLF+MM    L PDE  Y  L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCG 370
           + LC+  R ++A   +   +  G+  T   +  ++ G  + G  D +   +E    + C 
Sbjct: 575 DALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 631

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYE 428
             +  ++ LL   C   +   A  IL++M+ R I  C   ++ I I  +    +   A  
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI-KCTIFAYTILIDEMLREGKHDHAKR 690

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   M  S   P   TY+ F+   CK    EDA  +  ++  + +  D ++Y+ L++G  
Sbjct: 691 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 750

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIY-----GLCVMRKVDKA-----------I 532
            +  I  A      M    C  +  ++ +L+       L  +R VD +            
Sbjct: 751 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITW 810

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +L       G + T +TY+ ++ G  K  R ++  ++L  M  +G + + + Y +LI+  
Sbjct: 811 QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCC 870

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +    +    F ++M + G  P  E+   L+ GL +      V S    L+      D 
Sbjct: 871 CDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDE 930

Query: 653 SMYNILINGLWKEGLTSQASYLLDLM 678
             + IL +GL K G       +L +M
Sbjct: 931 VAWKILNDGLLKAGYVDICFQMLSIM 956



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 250/601 (41%), Gaps = 55/601 (9%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V  A+ + + M   G   +V  F  ++  + +  R   D   ++  M + G+VP+V T N
Sbjct: 269 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR-VGDARLLFDAMPQNGVVPSVMTYN 327

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            ++    +  R+  AL     M K GC P+  T+  +I GL  + + +++  +L      
Sbjct: 328 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL-CDQKTEEAEELLNNAVKE 386

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G    +  +T +I   C   K ++A+R+   M +     D   + +LIN L +  RL +A
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLEC 382
            ++L ++   GL P    +  I+ G C+ GK D ++  L+    D C      +N+L+  
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506

Query: 383 CCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
                K   A  +L KM  D  I +  ++   ++  C+  +   A+ L   M  + + PD
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566

Query: 442 CATYSAFVLGKCKLCNYEDALR-VFRQVSAQSLVL------------------------- 475
              Y+      CK    E+A   + R+  A + V                          
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626

Query: 476 ------DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 DS +YS L+  LC+ +++ EA+ +   MS  G   +  ++ ILI  +    K D
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 686

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A R+ +   SSG   + +TYT  +    K  R +D   ++ +M  EG A DV  Y ILI
Sbjct: 687 HAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 746

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS---SG------- 639
                   +         MV A   P+  T   LL  L  G+  ++ S   SG       
Sbjct: 747 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIEL 806

Query: 640 ------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 + ++V        + Y+ LI G  K G   +A  LLD M GKG  P+   + LL
Sbjct: 807 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 866

Query: 694 V 694
           +
Sbjct: 867 I 867



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 188/427 (44%), Gaps = 31/427 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y   +  L R +  E   R++  +    L+PD +TY  +I   C+   L  A+     ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             GL P       +V G C  G+  ++         ++  P   L+ C  N         
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWL------FLMMP---LMGCQRNEY------- 254

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                         S+ I I+ LC+ + +RKA  L   M      P+   ++  + G CK
Sbjct: 255 --------------SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCK 300

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                DA  +F  +    +V   ++Y+ ++ G  ++ ++ +A+++   M KNGC     +
Sbjct: 301 SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 360

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LIYGLC  +K ++A  L + A   G + T  T+T ++ G    ++  D L +  +M+
Sbjct: 361 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
              C LD++ +  LI S+ ++++LK+     N +   GLVP+  T  S++ G     ++ 
Sbjct: 420 SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVD 479

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    +  +  D    ++  YN L+ GL K+    +A  LL  M   G +P+  T+  L+
Sbjct: 480 IALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 539

Query: 695 GSSVGEE 701
                E 
Sbjct: 540 QGQCDEH 546



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 207/504 (41%), Gaps = 22/504 (4%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAM 151
           Q  A TY  ++  L     + +   L   M K+   PNV     +L+    + +  + A 
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI-TYTTLLQGQCDEHDFDNAF 552

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           R+   M   G K     + V+  A+ +  R    + F+    V+ G+         L++ 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI----VRKGVALTKVYYTTLIDG 608

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +    + A     RM  +GC P+S T+ +++  L    R+++++ IL +M   GI+  
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  YT +I  + RE K + A R++  M +    P   TY   IN  C+  RL+DA D++ 
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
            M   G+ P    +  ++ G   +G  D + + L+   G    P N    C        L
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP-NYWTYC------LLL 781

Query: 392 AKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
              +   +A  +  D    WN+         E+   ++LL RMV   + P   TYS+ + 
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLI--------ELDITWQLLERMVKHGLNPTVTTYSSLIA 833

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    E+A  +   +  + L  +   Y+ L++  C  +   +A+     MS+ G   
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S+ +L+ GLC     +K   L       G ++    +  +  GL+K         +L
Sbjct: 894 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953

Query: 571 AQMLVEGCALDVEAYCILIQSMSE 594
           + M    C +  + Y ++   M E
Sbjct: 954 SIMEKRYCCISSQTYALVTNKMHE 977



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 210/504 (41%), Gaps = 26/504 (5%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     S++  +    +V+ A+ VL  M   G + +   +N ++  +V++K+      
Sbjct: 460 PNVI-TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 518

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            + K M K GI+PNV T   LL+   + +  ++A   F  M + G  P+   + ++   L
Sbjct: 519 LLTK-MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R +++ S +      G+ L   +YT +I    +    + A  L + M      PD 
Sbjct: 578 CKAGRAEEAYSFIVRK---GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            TY  L++ LC+  RL++A  IL+ M + G+  T   +  ++  +   GK D +     +
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
                  P    +   +   C  G+   A+ ++ KM    +A D  ++NI I        
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754

Query: 423 IRKAYELLGRMVVSSVVPDCATYS-----------AFVL-----GKCKLCNYEDALRVFR 466
           I +A+  L RMV +S  P+  TY            A+V      G   L   +   ++  
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++    L     +YS L+ G C+  ++ EA  +   M   G S +   + +LI   C  +
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 874

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
             +KA+   S+    G      +Y  +++GL      + +  +   +L  G   D  A+ 
Sbjct: 875 FFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWK 934

Query: 587 ILIQSMSEQNKLKDCALFFNVMVK 610
           IL   + +   +  C    ++M K
Sbjct: 935 ILNDGLLKAGYVDICFQMLSIMEK 958


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 219/485 (45%), Gaps = 34/485 (7%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ +L  M   G+  S+   N +L       R  ++ V +  +MV+ G  P+  T   L+
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR-ISEAVALVDQMVEMGYQPDTVTFTTLV 177

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             LF+ N+   A+    RM  KGC P+  T+  VI GL      D ++++L +M    I+
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++  Y+ +I  LC+   +++A+ LF  M    + PD  TY  LI+CLC   R  DA+ +
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
           L DM+   + P    F                               N+L++     GK 
Sbjct: 298 LSDMLERKINPNVVTF-------------------------------NSLIDAFAKEGKL 326

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A+ + ++M  R I  +  ++N  I   C ++ + +A ++   MV    +PD  TY+  
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G CK     D + +FR +S + LV ++++Y+ L+ G  Q      A  VF  M  +G 
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +  ++N L+ GLC   K++KA+ +      S       TY  +  G+ K  + +D   
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG-L 627
           +   + ++G   DV AY  +I    ++   ++    F  M + G +PD  T  +L+   L
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566

Query: 628 ADGSQ 632
            DG +
Sbjct: 567 RDGDK 571



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 153/657 (23%), Positives = 296/657 (45%), Gaps = 71/657 (10%)

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
           +S+ KRF H         L+ G+        GL  +  +E+    R AL+        H 
Sbjct: 1   MSLAKRFVHLRKASPSFCLR-GIY-----FSGLSYDGYREKLS--RNALL--------HL 44

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDT 204
           +++ A+ +   M       S+  F+ +L AI + K+   D V  + E ++  G+  N+ T
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK--FDLVISFGEKMEILGVSHNLYT 102

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N ++  L   +++  AL    +M K G  P+  T   ++ G    +R+ ++V+++ +M 
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           ++G Q +   +T ++  L + NK  EA+ L + M      PD +TY  +IN LC+    D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
            A ++L  M    +     ++  ++  LC+    D+++N   +       P    +++L+
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            C CN G++  A  +L  M +RKI  +  ++N  I    +  ++ +A +L   M+  S+ 
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY++ + G C     ++A ++F  + ++  + D ++Y+ L+ G C+ +K+ + +E+
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  MS+ G   ++ ++  LI+G       D A  +     S G      TY  ++ GL K
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             + +  +VV   +       D+  Y I+ + M +  K++D    F  +   G+ PD   
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD--- 519

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
                                              YN +I+G  K+GL  +A  L   M 
Sbjct: 520 --------------------------------VIAYNTMISGFCKKGLKEEAYTLFIKMK 547

Query: 680 GKGWVPDATTHGLLVGSSVGE-----------EIDSRRFAFDSSSFPDSVSDILAEG 725
             G +PD+ T+  L+ + + +           E+ S RFA D+S++   V+D+L +G
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDG 603


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 252/552 (45%), Gaps = 15/552 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           VY+ M    ++P+  +L+ L+E   +  + +        + K+G   N     IV+KGL 
Sbjct: 96  VYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLC 155

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            N  V +++ ++ EM    +  ++  Y  +I  LC+  KL+EA+ L   M A    P+ +
Sbjct: 156 RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 215

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           T   L++ LC++ R+D+A ++LE M   G      ++  ++ G C  G  D      ++ 
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
            G   S     ++ L+   C  G++  A  +L  MA+  I  D  ++   I  LC++   
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A +LL  MV     P   TY+  + G CK     DA ++ R +  +    D ++Y+ L
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSS--SFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           ++GLC   K+ EA+++F  M  N   L  +  +FN+LI GLC   ++ KA+++       
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G+     TY  ++ G +K  + K+ + +  Q+L  G   +   Y ILI    +   L   
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 515

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F  M   GL P      +L+  L     L    S   ++ + +   D   +N +I+G
Sbjct: 516 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 575

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFD---SSSF-P 715
             K G       L   M+  G  PDA T   L+   S +G E+D  + A +   +S F P
Sbjct: 576 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLG-ELDEAKSALERMVASGFTP 634

Query: 716 DS-VSDILAEGL 726
           D+ V D L +GL
Sbjct: 635 DALVYDSLLKGL 646



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 253/536 (47%), Gaps = 14/536 (2%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF ++V + N+VL  +     G  + + + +EM +  + P++ + N L+  L +  +++ 
Sbjct: 139 GFTVNVFIMNIVLKGLCRNG-GVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKE 197

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A+     M   GC PNS T   ++ GL  + R+D+++ +L  M   G   ++  Y  +I 
Sbjct: 198 AVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLIS 257

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C    L+    LF  M    +  + +TY  L++ LC   +  +AN +L  M   G+ P
Sbjct: 258 GFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP 317

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  ++ GLC+ G+   +++ L         P    +N LL   C  G    A  IL
Sbjct: 318 DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 377

Query: 397 EKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS--VVPDCATYSAFVLGKC 453
             M ++ K AD  ++N  ++ LC+  ++ +A +L   M  +   + P+  T++  + G C
Sbjct: 378 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 437

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K      A+++ R++  +    + ++Y+ L+ G  +  KI EA+E++  +   G   +S 
Sbjct: 438 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 497

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVL 570
           +++ILI G C MR ++ A  L     + G +     Y  +M  L K   L++AK L    
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSL---F 554

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M    C  D+ ++  +I    +    +        MV+ GL PD  T  +L++ L+  
Sbjct: 555 QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKL 614

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            +L    S + ++V+     D+ +Y+ L+ GL  +G T++   LL  M  KG V D
Sbjct: 615 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 670



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 204/460 (44%), Gaps = 15/460 (3%)

Query: 282 LCRE--NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
           LC++  ++  EA+ LF      +L+P   T   L++ L  +     A  +   M  + + 
Sbjct: 47  LCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVL 106

Query: 340 PTDDVFVDIVRGLCEVGK--FDESVNFLEDKCGYVTSPH--NALLECCCNAGKFFLAKCI 395
           P+      ++    +  K      V  L  K G+  +    N +L+  C  G  F A  +
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166

Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           + +M  + ++ D  S+N  I  LC+ +++++A  LL  M  +   P+  T +  + G CK
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               ++A+ +   +  +    D + Y  L+ G C    +    E+F  M   G S +  +
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           ++ L++GLC + +  +A  + +     G      TYT ++ GL K  RA   + +L  M+
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G       Y +L+  + ++  + D      +M++ G   D  T  +L+ GL D  ++ 
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406

Query: 635 LVSSGINKLVSDSEVLDSSM--YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                 N +  +   L+ ++  +N+LI GL KEG  ++A  +   M+ KG   +  T+ +
Sbjct: 407 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466

Query: 693 LVG-----SSVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
           L+G       + E ++  +   D    P+S +  IL +G 
Sbjct: 467 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 11/376 (2%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R   AM +L  M   G + S   +NV+L  + +E     D   + + M++ G   +V T 
Sbjct: 334 RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL-VIDAFKILRMMIEKGKKADVVTY 392

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCC--PNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N L++ L +  +++ AL  F  M     C  PN  TF ++I GL    R+  +V I  +M
Sbjct: 393 NTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM 452

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G    L  Y  ++    +  K++EA+ L+K +  L  +P+  TY  LI+  C+   L
Sbjct: 453 VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRML 512

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
           + A  +  +M   GL P    +  ++  LC+ G  +++ +  ++       P     N +
Sbjct: 513 NIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTM 572

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++    AG F   K +  KM +  +  D  +++  I  L +  E+ +A   L RMV S  
Sbjct: 573 IDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGF 632

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC---QVEKITE 495
            PD   Y + + G     +  + + +  Q++A+  VLD    S ++  LC   Q   + E
Sbjct: 633 TPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVME 692

Query: 496 AVEVFCCMSKNGCSLS 511
            +  F   +  G S+S
Sbjct: 693 LLPTFFQGTSEGASIS 708



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 37/318 (11%)

Query: 414 IRWLCE--NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           +R LC+  N +  +A  L    +  +++P  AT +  V    +  NY  A  V+R+++  
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL------------- 518
            ++    S S L+E     +K      V   + K G +++    NI+             
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 519 ----------------------IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
                                 I GLC  +K+ +A+ L     ++G    + T T +M G
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  R  + + +L  M  +G   DV  Y  LI        L      F+ M+  G+  +
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T   L+HGL    Q    ++ +N +       D   Y  LI+GL K+G  + A  LL+
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 677 LMLGKGWVPDATTHGLLV 694
           LM+ KG  P   T+ +L+
Sbjct: 344 LMVEKGEEPSNVTYNVLL 361



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 38/194 (19%), Positives = 82/194 (42%), Gaps = 1/194 (0%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F     +N A  +   M + G   ++  +N ++ ++ +E         +++EM  A
Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS-LEQAKSLFQEMGNA 560

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
              P++ + N +++   +    +   +   +M + G  P++ TF  +I  L     +D++
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
            S L  M   G   +   Y  ++  L  +    E I L   M A   + D      ++ C
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 680

Query: 317 LCENLRLDDANDIL 330
           LC +++  D  ++L
Sbjct: 681 LCHSIQEVDVMELL 694


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 128/556 (23%), Positives = 251/556 (45%), Gaps = 21/556 (3%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ A+ ++  M   G K ++   N ++  +    +  +D V +   MV+ G  PN  T 
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK-VSDAVLLIDRMVETGFQPNEVTY 215

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +L+V+ ++ +   A++  R+M ++    ++  + I+I GL  +  +D++ ++  EM  
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G + ++  YT +I   C   + ++  +L + M    + PD + +  LI+C  +  +L +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLE 381
           A ++ ++MI  G++P    +  ++ G C+  + D++ + L+      CG      N L+ 
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C A        +  KM+ R + AD  ++N  I+  CE  ++  A EL   MV   V P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  +Y   + G C     E AL +F ++    + LD   Y+ ++ G+C   K+ +A ++F
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
           C +   G      ++NI+I GLC    + +A  L       G S    TY  ++   +  
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
             A     ++ ++   G ++D       + +++              M+KAG  PD  T 
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR-------------MLKAGHEPDVFTF 622

Query: 621 LSLLHG--LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
            +LL    L + + ++   +    + +     +   YN +I GL    + SQ   +LD M
Sbjct: 623 TTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQM 682

Query: 679 LGKGWVPDATTHGLLV 694
             +G  P+A T    +
Sbjct: 683 FERGCQPNAVTKSTFI 698



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 229/503 (45%), Gaps = 40/503 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +++K G  P+  T + L+  L    R+  AL+   RM + G  P   T   ++ GL  N 
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +V D+V ++  M + G Q     Y  ++ ++C+  +   A+ L + M    +  D + Y 
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+ LC++  LD+A ++  +M + G      ++  ++RG C  G++D+    L D    
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
             +P     +AL++C    GK   A+ + ++M  R I+ D  ++   I   C+  ++ KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +L  MV     P+  T++  + G CK    +D L +FR++S + +V D+++Y+ L++G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++ K+  A E+F  M          S+ IL+ GLC   + +KA+ +      S     
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y  I+ G+    +  D   +   + ++G   DV+ Y I+I  + ++  L +  L F 
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M + G  P+  T                                   YNILI     EG
Sbjct: 552 KMEEDGHSPNGCT-----------------------------------YNILIRAHLGEG 576

Query: 667 LTSQASYLLDLMLGKGWVPDATT 689
             ++++ L++ +   G+  DA+T
Sbjct: 577 DATKSAKLIEEIKRCGFSVDAST 599



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 224/513 (43%), Gaps = 32/513 (6%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V +++EM ++   P +   + L  V+  T + +  LD  ++M  KG   N  T  I+I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  ++  + S +G++  LG + +   ++ +I  LC E ++ EA+ L   M  +   
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P  +T   L+N LC N ++ DA  +++ M+  G  P +                      
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE---------------------- 212

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
                  VT  +  +L+  C +G+  LA  +L KM +RKI  D   ++I I  LC++  +
Sbjct: 213 -------VT--YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A+ L   M +     D   Y+  + G C    ++D  ++ R +  + +  D +++S L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++   +  K+ EA E+   M + G S  + ++  LI G C   ++DKA  +  L  S G 
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+  ++ G  K     D L +  +M + G   D   Y  LIQ   E  KL+    
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  MV   + PD  +   LL GL D  +         K+      LD  +YNI+I+G+ 
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                  A  L   +  KG  PD  T+ +++G 
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 185/417 (44%), Gaps = 30/417 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F    R +   ++L +M        V  F+ ++   V+E +   +   ++KEM++
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK-LREAEELHKEMIQ 345

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            GI P+  T   L++   + N+++ A      M  KGC PN RTF I+I G    + +DD
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            + +  +M   G+  +   Y  +I   C   KLE A  LF+ M +  + PD ++Y+ L++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+N   + A +I E +    +     ++  I+ G+C   K D++ +           P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIR-WLCEN--------- 420
               +N ++   C  G    A  +  KM  D    +  ++NI IR  L E          
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585

Query: 421 EEIRK------------AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE--DALRVFR 466
           EEI++            A   L RM+ +   PD  T++  +   C   N    DA  +F+
Sbjct: 586 EEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFK 645

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            + A     + ++Y+ +++GL     I++   V   M + GC  ++ + +  I GLC
Sbjct: 646 NMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 242/541 (44%), Gaps = 8/541 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +F+ +L  + + KR       + + M + G  P+V + + LL+      R E AL+    
Sbjct: 130 IFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSM 189

Query: 228 MHKKG---CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           M   G     PN  T+  VI GL     VD +  +   M D G++     YTC+I     
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             K +E +++ + M    L PD   Y  L++ LC+N R  +A +I + +I  G+ P   +
Sbjct: 250 IGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI 309

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC--CCNAGKFFL--AKCILEKMA 400
           +  ++ G    G   E  +FL+   G   SP + +     C  A K  +  A  I +KM 
Sbjct: 310 YGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMR 369

Query: 401 DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            ++++ +  ++   I  LC+   +  A     +M+   + PD   +S+ V G C +  +E
Sbjct: 370 QQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWE 429

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A  +F +V  Q + LD++ ++ L+  LC+  ++ EA  +   M + G      S+N L+
Sbjct: 430 KAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLV 489

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C+  ++D+A +L  +  S G      TY  ++ G  K +R  D   +  +ML++G  
Sbjct: 490 DGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLT 549

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            DV  Y  ++  + +  +  +    +  M+ +    +  T   +++GL   + +      
Sbjct: 550 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKM 609

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
            + L S    LD    NI+I  L K G    A  L   +   G VPD  T+ L+  + + 
Sbjct: 610 FHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIK 669

Query: 700 E 700
           E
Sbjct: 670 E 670



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 237/493 (48%), Gaps = 6/493 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           + + V + +EM   G+ P+      LL+ L +  R   A + F  + +KG  PN   + I
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGI 312

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ G      + +  S L  M   G+  +   +  +     ++  ++EA+ +F  MR   
Sbjct: 313 LLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES- 361
           L P+ +TY  LI+ LC+  R+DDA      MI  G+TP   VF  +V GLC V K++++ 
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 362 ---VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
                 L+      T   N L+   C  G+   A+ +++ M    +  D  S+N  +   
Sbjct: 433 ELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGH 492

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C    I +A +LL  +V   + PD  TY+  + G CK    +DA  +FR++  + L  D 
Sbjct: 493 CLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDV 552

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ ++ GL Q  + +EA E++  M  +   ++  ++NI+I GLC    VD+A ++   
Sbjct: 553 VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHS 612

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S        T   ++  L+K  R +D + + A +   G   DVE YC++ +++ ++  
Sbjct: 613 LCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 672

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L++    F+ M + G  P+   + +L+  L     ++   + ++KL   +  L++S  ++
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSM 732

Query: 658 LINGLWKEGLTSQ 670
           LI+ ++  G   Q
Sbjct: 733 LIS-IYSRGEYQQ 744



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 188/423 (44%), Gaps = 21/423 (4%)

Query: 289 EEAIRLF-KMMR--ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV- 344
           E  + LF +M+R  ++ + P   TY  LI C C   RL         ++  G    D V 
Sbjct: 71  ELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVI 130

Query: 345 FVDIVRGLCEVGKFDESVNFL-----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           F  +++GLC+  + DE+ + L     E  C      ++ LL+  CN  +   A  +L  M
Sbjct: 131 FSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMM 190

Query: 400 ADRKIADCDSWNIP--------IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           AD    D D  + P        I  LC+ + + +A  +   M+   V P+  TY+  + G
Sbjct: 191 AD----DGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
              +  +++ +++ +++S   L  D   Y+ L++ LC+  + TEA  +F  + + G   +
Sbjct: 247 YLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPN 306

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            + + IL++G      + +      L   +G S     +  +     K     + + +  
Sbjct: 307 VTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFD 366

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M  +  + ++  Y  LI ++ +  ++ D  L FN M+  G+ PD     SL++GL    
Sbjct: 367 KMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +         +++     LD+  +N L+  L +EG   +A  L+DLML  G  PD  ++ 
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYN 486

Query: 692 LLV 694
            LV
Sbjct: 487 TLV 489


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 141/591 (23%), Positives = 263/591 (44%), Gaps = 39/591 (6%)

Query: 106 LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK-L 164
           L  AG+V+ ++   Q M         +AL++ + +F      + A++     +  G +  
Sbjct: 8   LPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 67

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            V V+N +L A++ E       V VY  M KAG+ PNV T N L+  L + +R+++A   
Sbjct: 68  GVRVYNHLLDALLRENM-VGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M +KGC P+  +   ++ G+    RV+++   L E     + ++ S Y  ++  LC 
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET----VPVQAS-YNAVVHALCG 181

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           E ++ E   +   M    L P+ +TY  +++  C+   L  A  IL  M+ +G TP    
Sbjct: 182 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 241

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           F  +V+G  E GK                  H+AL               +   M D   
Sbjct: 242 FTALVKGFFEDGKV-----------------HDAL--------------SMWHWMVDEGW 270

Query: 405 ADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           A    S+N+ IR LC   +++ A +    M  ++++P+  TYS  V G     + + A+ 
Sbjct: 271 APSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAML 330

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           ++ ++ +     + + Y+ +++ LC+     +A  +   M  + C  ++ +FN LI  LC
Sbjct: 331 IWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLC 390

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              +V +A+ +      +G      TY +++ GL +    KD   ++ +ML  G  L + 
Sbjct: 391 DCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLV 450

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y  +I  + +    K   L    M+  G+ PD  T  +++H      ++ + +  + ++
Sbjct: 451 TYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 510

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            + +   +   Y ILI+ L  +G  S A   L  ML +G  P+  T  +LV
Sbjct: 511 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 5/287 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ IR LC+N+ +  A ++L  M      PD  ++   V G CKL   E+A    R  
Sbjct: 106 TYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA----RGF 161

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            A+++ + + SY+ +V  LC   ++ E   V   M + G   +  ++  ++   C  R++
Sbjct: 162 LAETVPVQA-SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAREL 220

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A  + +   S G +    T+T ++ G  +  +  D L +   M+ EG A    +Y +L
Sbjct: 221 RMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVL 280

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I+ +     LK    FFN M +  L+P+  T  +L+ G ++   L       N++ S   
Sbjct: 281 IRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 340

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
             +  +Y  +I+ L K+ +  QA  L+D ML     P+  T   L+G
Sbjct: 341 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIG 387



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 105/264 (39%), Gaps = 18/264 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKR--------FQHTADTYCKMILKLGLAGNVEEMEG 117
           L+    N  DL  A+ I  W  ++          + +  D  CK ++        ++ E 
Sbjct: 315 LVDGFSNAGDLDGAMLI--WNEMKSSGCKPNVVVYTNMIDVLCKKMM-------FDQAES 365

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           L   M+ +  P       +L+    +  RV  A+ V   M   G   +   +N +L  + 
Sbjct: 366 LIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLF 425

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E      F  V  EM+  G   ++ T N ++  L +    + A+    RM  +G  P++
Sbjct: 426 REGNHKDAFAMVI-EMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 484

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +I       +V  +  +LG+M  +     +  YT +I  LC + KL  A+     
Sbjct: 485 FTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLK 544

Query: 298 MRALDLMPDELTYEELINCLCENL 321
           M    + P+E T+  L+  +  N+
Sbjct: 545 MLYEGICPNEATWNVLVRAIFTNI 568


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 144/590 (24%), Positives = 249/590 (42%), Gaps = 39/590 (6%)

Query: 140 SFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
           SF    R   A+R+L NM   G F  +V    VV G         A  +F   EM++  +
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF--DEMLECCL 291

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P+V T N L+  L +   +  +   F ++ K+G CPN  TF I I+GL     +D +V 
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +LG +   G++ ++  Y  +I  LCR++++ EA      M      P++ TY  +I+  C
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA 378
           +   + DAN IL+D +  G  P +  +  +V G C+ G  D+++   +D  G    P   
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 471

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +                              +N  I+ LC+   I  A +L+  M     
Sbjct: 472 V------------------------------YNTLIKGLCQQGLILPALQLMNEMAEKGC 501

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD  TY+  + G CK+    DA  +      +  + D  +Y+ LV+G C+  K+  A+E
Sbjct: 502 KPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIE 561

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M   G +    ++N L+ GLC   K ++ + +       G +    TY  I+  L 
Sbjct: 562 LVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLC 621

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
             ++  + + +L +M  +G   DV ++  LI    +   L      F  M K   V    
Sbjct: 622 NSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTT 681

Query: 619 TMLS-LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
              + ++   ++   + +     +++  +    D+  Y +LI+G  K G  +Q    L  
Sbjct: 682 ATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLE 741

Query: 678 MLGKGWVPDATTHG-----LLVGSSVGEEIDSRRFAFDSSSFPDSVSDIL 722
            + KG++P  TT G     L V   V E +            PD+V+ I 
Sbjct: 742 NIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTIF 791



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 218/562 (38%), Gaps = 66/562 (11%)

Query: 173 LGAIVEEKRGFADFVFVYKEMVKA----GIVPNVDTL---------NYLLEVLF------ 213
           L  I + K+GF   +F YK M++     G    ++ L         N LLE ++      
Sbjct: 105 LQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRF 164

Query: 214 --ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
                +I+ A+D F RM    C P+  ++  ++  L+     + +  +   M D  ++ +
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  YT  I   CR  +   A+RL + M  L    + + Y  ++    E    D A ++ +
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAG 387
           +M+   L P    F  +V  LC+ G   ES    +        P+    N  ++  C  G
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  +L  ++   +  D  ++N  I  LC    + +A E L +MV     P+  TY+
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G CK     DA R+ +    +    D  +Y  LV G CQ     +A+ VF      
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G   S   +N LI GLC    +  A++L +     G      TY  I+ GL K+    D 
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             ++   + +GC  D+  Y  L+     Q KL       N M   G+ PD  T       
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT------- 577

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                                       YN L+NGL K   + +   +   M  KG  P+
Sbjct: 578 ----------------------------YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609

Query: 687 ATTHGLLVGS-----SVGEEID 703
             T+  ++ S      V E +D
Sbjct: 610 IITYNTIIESLCNSKKVNEAVD 631



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/403 (21%), Positives = 163/403 (40%), Gaps = 37/403 (9%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK        G V +   + ++ V + +        SLV  F      + AM V  +
Sbjct: 408 DGYCK-------KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
               G + S+ V+N ++  + ++         +  EM + G  P++ T N ++  L +  
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLM-NEMAEKGCKPDIWTYNLIINGLCKMG 519

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            +  A         KGC P+  T+  ++ G     ++D ++ ++  M+  G+  ++  Y 
Sbjct: 520 CLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYN 579

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC+  K EE + +FK M      P+ +TY  +I  LC + ++++A D+L +M   
Sbjct: 580 TLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSK 639

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           GLTP    F  ++ G C+VG  D +                                  +
Sbjct: 640 GLTPDVVSFGTLITGFCKVGDLDGAYGLFRG----------------------------M 671

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           EK  D       ++NI I    E   ++ A  L   M  +   PD  TY   + G CK  
Sbjct: 672 EKQYDVSHTTA-TYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTG 730

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           N     +   +   +  +    ++ +++  LC   K+ EAV +
Sbjct: 731 NVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGI 773


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 260/606 (42%), Gaps = 47/606 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +PNV + 
Sbjct: 102 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSY 161

Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           N LL+ L + NR + AL+    M      G  P+  ++  VI G       D + S   E
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLE--------------------------------- 289
           M D GI  ++  Y  II  LC+   ++                                 
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 290 --EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             EAI   K MR+  + PD +TY  L++ LC+N R  +A  I + M   GL P    +  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRK 403
           +++G    G   E    L+        P +   ++L C     GK   A  +  KM  + 
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  +  ++   I  LC++  +  A     +M+   + P    Y++ + G C    +E A 
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++  + + L++I ++ +++  C+  ++ E+ ++F  M + G   +  ++N LI G 
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C+  K+D+A++L S   S G    T TY+ ++ G  K+ R +D LV+  +M   G + D+
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y I++Q + +  +       +  + ++G   +  T   +LHGL               
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL----VGSSV 698
           L      L++  +NI+I+ L K G   +A  L       G VP+  T+ L+    +G  +
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701

Query: 699 GEEIDS 704
            EE+D 
Sbjct: 702 LEELDQ 707



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/518 (22%), Positives = 234/518 (45%), Gaps = 40/518 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     P+  T+ 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADV-ARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G +++   +T ++  LC + +  +A+ +  + M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMI--VIGLTPTDDV-FVDIVRGLCEVGK 357
           L  +P+  +Y  L+  LC+  R  +A ++L  M     G +P D V +  ++ G  + G 
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            D+                               A     +M DR I  D  ++N  I  
Sbjct: 212 SDK-------------------------------AYSTYHEMLDRGILPDVVTYNSIIAA 240

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+ + + KA E+L  MV + V+PDC TY++ + G C     ++A+   +++ +  +  D
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++YS L++ LC+  +  EA ++F  M+K G     +++  L+ G      + +   L  
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           L   +G       ++ ++    K  +    ++V ++M  +G   +   Y  +I  + +  
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +++D  L+F  M+  GL P      SL+HGL   ++       I +++     L++  +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I+   KEG   ++  L +LM+  G  P+  T+  L+
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 185/370 (50%), Gaps = 8/370 (2%)

Query: 168 VFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           VF++++ A    K+G  D  + V+ +M + G+ PN  T   ++ +L ++ R+E A+  F 
Sbjct: 373 VFSILICAYA--KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M  +G  P +  +  +I GL   ++ + +  ++ EM D GI L   F+  II   C+E 
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           ++ E+ +LF++M  + + P+ +TY  LIN  C   ++D+A  +L  M+ +GL P    + 
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++ G C++ + ++++   ++      SP    +N +L+      +   AK +  ++ + 
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610

Query: 403 KIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
               +  ++NI +  LC+N+    A ++   + +  +  +  T++  +    K+   ++A
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             +F   S+  LV +  +Y  + E +     + E  ++F  M  NGC++ S   N ++  
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 730

Query: 522 LCVMRKVDKA 531
           L    ++ +A
Sbjct: 731 LLQRGEITRA 740



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 108/513 (21%), Positives = 214/513 (41%), Gaps = 41/513 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++ +      ++ AM VL  M   G       +N +L       +      F+ K+M  
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL-KKMRS 294

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+V T + L++ L +  R   A   F  M K+G  P   T+  +++G      + +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
              +L  M   GI  +   ++ +I    ++ K+++A+ +F  MR   L P+ +TY  +I 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD---------------- 359
            LC++ R++DA    E MI  GL+P + V+  ++ GLC   K++                
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 360 -------------------ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
                              ES    E        P    +N L+   C AGK   A  +L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             M    +  +  +++  I   C+   +  A  L   M  S V PD  TY+  + G  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
                A  ++ +++     ++  +Y+ ++ GLC+ +   +A+++F  +      L + +F
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           NI+I  L  + + D+A  L     S+G      TY  +   ++     ++L  +   M  
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            GC +D      +++ + ++ ++     + +++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 232/508 (45%), Gaps = 40/508 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +++K G  P+  T + L+  L    R+  AL+   RM + G  P   T   ++ GL  N 
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +V D+V ++  M + G Q     Y  ++ ++C+  +   A+ L + M    +  D + Y 
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+ LC++  LD+A ++  +M + G      ++  ++RG C  G++D+    L D    
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
             +P     +AL++C    GK   A+ + ++M  R I+ D  ++   I   C+  ++ KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +L  MV     P+  T++  + G CK    +D L +FR++S + +V D+++Y+ L++G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++ K+  A E+F  M          S+ IL+ GLC   + +KA+ +      S     
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y  I+ G+    +  D   +   + ++G   DV+ Y I+I  + ++  L +  L F 
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M + G  P+  T                                   YNILI     EG
Sbjct: 552 KMEEDGHSPNGCT-----------------------------------YNILIRAHLGEG 576

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
             ++++ L++ +   G+  DA+T  ++V
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTVKMVV 604



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 224/513 (43%), Gaps = 32/513 (6%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V +++EM ++   P +   + L  V+  T + +  LD  ++M  KG   N  T  I+I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  ++  + S +G++  LG + +   ++ +I  LC E ++ EA+ L   M  +   
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P  +T   L+N LC N ++ DA  +++ M+  G  P +                      
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE---------------------- 212

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
                  VT  +  +L+  C +G+  LA  +L KM +RKI  D   ++I I  LC++  +
Sbjct: 213 -------VT--YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A+ L   M +     D   Y+  + G C    ++D  ++ R +  + +  D +++S L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++   +  K+ EA E+   M + G S  + ++  LI G C   ++DKA  +  L  S G 
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+  ++ G  K     D L +  +M + G   D   Y  LIQ   E  KL+    
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  MV   + PD  +   LL GL D  +         K+      LD  +YNI+I+G+ 
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                  A  L   +  KG  PD  T+ +++G 
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 216/446 (48%), Gaps = 6/446 (1%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           K++   GI  N+ TLN ++       +   A     ++ K G  P++ TF  +IKGL   
Sbjct: 102 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 161

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +V ++V ++  M + G Q ++  Y  I+  +CR      A+ L + M   ++  D  TY
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +I+ LC +  +D A  + ++M   G+  +   +  +VRGLC+ GK+++    L+D   
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281

Query: 371 YVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P+    N LL+     GK   A  + ++M  R I+ +  ++N  +   C    + +
Sbjct: 282 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 341

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +L  MV +   PD  T+++ + G C +   +D ++VFR +S + LV ++++YS LV+
Sbjct: 342 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 401

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G CQ  KI  A E+F  M  +G      ++ IL+ GLC   K++KA+ +      S    
Sbjct: 402 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               YT I+ G+ K  + +D   +   +  +G   +V  Y ++I  + ++  L +  +  
Sbjct: 462 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521

Query: 606 NVMVKAGLVPDRETMLSLLHG-LADG 630
             M + G  P+  T  +L+   L DG
Sbjct: 522 RKMEEDGNAPNDCTYNTLIRAHLRDG 547



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 195/400 (48%), Gaps = 8/400 (2%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++     FN ++  +  E +  ++ V +   MV+ G  P+V T N ++  +  +     
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGK-VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 201

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           ALD  R+M ++    +  T+  +I  L  +  +D ++S+  EM   GI+  +  Y  ++ 
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+  K  +   L K M + +++P+ +T+  L++   +  +L +AN++ ++MI  G++P
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ G C   +  E+ N L+    +KC        +L++  C   +      + 
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 381

Query: 397 EKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             ++ R  +A+  +++I ++  C++ +I+ A EL   MV   V+PD  TY   + G C  
Sbjct: 382 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E AL +F  +    + L  + Y+ ++EG+C+  K+ +A  +FC +   G   +  ++
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501

Query: 516 NILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIM 554
            ++I GLC    + +A I LR +    G +    TY  ++
Sbjct: 502 TVMISGLCKKGSLSEANILLRKME-EDGNAPNDCTYNTLI 540



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/517 (21%), Positives = 235/517 (45%), Gaps = 9/517 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + +++EM+++  +P++   +     +  T +    LD  +++   G   N  T  I+I
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +   + S+LG++  LG + + + +  +I  L  E K+ EA+ L   M      
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 180

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +TY  ++N +C +     A D+L  M    +      +  I+  LC  G  D +++ 
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 240

Query: 365 LED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
            ++      K   VT  +N+L+   C AGK+     +L+ M  R+I  +  ++N+ +   
Sbjct: 241 FKEMETKGIKSSVVT--YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  ++++A EL   M+   + P+  TY+  + G C      +A  +   +       D 
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++++ L++G C V+++ + ++VF  +SK G   ++ +++IL+ G C   K+  A  L   
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S G      TY  ++ GL    + +  L +   +      L +  Y  +I+ M +  K
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++D    F  +   G+ P+  T   ++ GL     L   +  + K+  D    +   YN 
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           LI    ++G  + ++ L++ M   G+  DA++  +++
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 201/460 (43%), Gaps = 5/460 (1%)

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F   ++  I + + DD++++  EM        L  ++     + R  +    +   K + 
Sbjct: 46  FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE 105

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              +  +  T   +INC C   +   A  +L  ++ +G  P    F  +++GL   GK  
Sbjct: 106 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 165

Query: 360 ESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E+V      +E+ C      +N+++   C +G   LA  +L KM +R + AD  +++  I
Sbjct: 166 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 225

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC +  I  A  L   M    +     TY++ V G CK   + D   + + + ++ +V
Sbjct: 226 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 285

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + I+++ L++   +  K+ EA E++  M   G S +  ++N L+ G C+  ++ +A  +
Sbjct: 286 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 345

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             L   +  S    T+T ++ G   ++R  D + V   +   G   +   Y IL+Q   +
Sbjct: 346 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 405

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             K+K     F  MV  G++PD  T   LL GL D  +L         L      L   M
Sbjct: 406 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 465

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y  +I G+ K G    A  L   +  KG  P+  T+ +++
Sbjct: 466 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 99/275 (36%), Gaps = 35/275 (12%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L   M+ S  +P    +S F     +   +   L   +Q+    +  +  + + ++ 
Sbjct: 62  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  K   A  V   + K G    +++FN LI GL +  KV +A+ L      +G   
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 181

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  I+ G+ +       L +L +M       DV  Y  +I S+     +      F
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M   G+                                 S V+    YN L+ GL K 
Sbjct: 242 KEMETKGI--------------------------------KSSVV---TYNSLVRGLCKA 266

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           G  +  + LL  M+ +  VP+  T  +L+   V E
Sbjct: 267 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 301


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 234/544 (43%), Gaps = 8/544 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++++  V N +L  + + KR       + K M + G  P+V + N LL+      R E 
Sbjct: 124 GWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEE 183

Query: 221 ALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           AL+    M     + C PN  ++ IVI G     +VD + ++  EM D GIQ  +  YT 
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC+   ++ A  +F+ M    + PD  TY  LI+      +  +   +LE+M   G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAK 393
           L P    +  ++  LC  G+  E+    +        P+ A    L+      G      
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L  M +  ++ D   +NI      +   I +A  +  +M    + PD   Y A +   
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDAL 423

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CKL   +DA+  F Q+  + +  +   ++ LV GLC V+K  +A E +  M   G     
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             FN ++  LC   +V KA RL  L    GT     +YT ++ G   + R  +    L  
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV 543

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML  G   D   Y  L+       ++ D    F  M++ G+ P   T  ++LHGL    +
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                     +++  +  +  +YNI++NGL K     +A  L   +  K +  + TT  +
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 693 LVGS 696
           ++G+
Sbjct: 664 MIGA 667



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 241/535 (45%), Gaps = 10/535 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A  V   M   G K   D +N ++   +   + + + V + +EM   G+ P+  T  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEMSAHGLKPDCYTYG 312

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LL  L    R   A   F  M +KG  PN   + I+I G      + +   +L  M + 
Sbjct: 313 SLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN 372

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+  +   +  I     ++  ++EA+ +F  M+   L PD + Y  LI+ LC+  R+DDA
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA 432

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
                 M+  G+ P   VF  +V GLC V K++++  F  +       P     N +L  
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 383 CCNAGKFFLAKCI---LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            C  G+   A+ +   +E++  R      S+   I   C    I +A + L  M+   + 
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTR--PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLK 550

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G C+    +DA  VFR++    +    ++YS ++ GL    + +EA E+
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           +  M  +G   +   +NI++ GL     VD+A +L     S       +T+  ++  L K
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             R +D + + A +   G   DV  YC++ +++ E+  L++    F+ M K+G  P+   
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           + +L+  L     +    + + KL   +  L++S   +LI+ L ++     A+ L
Sbjct: 731 LNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/514 (22%), Positives = 223/514 (43%), Gaps = 40/514 (7%)

Query: 31  NTIPLSSETDMIKSHQTTDYEAKI--QSLRHNLSPDHLIRVLDNTNDL-SSALKIFKWVS 87
           N +  ++  D +   Q  D    +  Q +   + PD+     D  N L    L I KW  
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDN-----DTYNCLIHGYLSIGKWKE 291

Query: 88  IQKRFQHTAD--------TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLV 138
           + +  +  +         TY  ++  L   G   E   L  +M+++   PNV     ++ 
Sbjct: 292 VVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV-----AIY 346

Query: 139 FSFVNHYRVNGA---MRVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
              ++ Y   GA   M  L+N M   G      +FN++  A  + K    + + ++ +M 
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK-KAMIDEAMHIFNKMK 405

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G+ P+V     L++ L +  R++ A+ +F +M  +G  PN   F  ++ GL    + +
Sbjct: 406 QQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWE 465

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +     EM + GI+ ++ F+  I+  LC + ++ +A RL  +M  +   P  ++Y  LI
Sbjct: 466 KAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLI 525

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
              C   R+D+A   L+ M+ +GL P +  +  ++ G C  G+ D++     +      +
Sbjct: 526 GGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT 585

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI-----RWLCENEEIRK 425
           P    ++ +L       +F  AK +   M    I     WNI I       L +N  + +
Sbjct: 586 PGVVTYSTILHGLFTTRRFSEAKELYLNM----ITSGKQWNIWIYNIILNGLSKNNCVDE 641

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A++L   +       +  T++  +    K    EDA+ +F  +S+  LV D  +Y  + E
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAE 701

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            L +   + E  ++F  M K+G + +S   N L+
Sbjct: 702 NLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 189/431 (43%), Gaps = 9/431 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL-EDM 333
           Y+ +I   CR  +LE     F ++       + +   +L+  LC+  RL +A DIL + M
Sbjct: 97  YSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRM 156

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---DKCGYVTSPHNALLECCCNA---- 386
             +G TP    +  +++G C   + +E++  L    D  G    P+        N     
Sbjct: 157 PELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTE 216

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G+   A  +  +M DR I  +  ++   I  LC+ + + +A  +  +M+   V PD  TY
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTY 276

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  + G   +  +++ +R+  ++SA  L  D  +Y  L+  LC   +  EA  +F  M +
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIR 336

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G   + + + ILI+G      + +   L +L   +G S     +  I     K     +
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            + +  +M  +G + DV  Y  LI ++ +  ++ D  L FN M+  G+ P+     SL++
Sbjct: 397 AMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL    +         ++++     D   +N ++  L  +G   +A  L+DLM   G  P
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516

Query: 686 DATTHGLLVGS 696
              ++  L+G 
Sbjct: 517 GVISYTTLIGG 527



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 4/280 (1%)

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           E+E +   +  + R     V PD  TYS  +   C++   E     F  +      +++I
Sbjct: 71  ESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI 130

Query: 479 SYSKLVEGLCQVEKITEAVEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIR-LRS 536
             ++L++GLC  +++ EA+++    M + GC+    S+N L+ G C  ++ ++A+  L  
Sbjct: 131 VINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHM 190

Query: 537 LAYSSGTSYTTS--TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           +A S G S   +  +Y  ++ G     +      +  +M+  G   +V  Y  +I  + +
Sbjct: 191 MADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
              +      F  M+  G+ PD +T   L+HG     +   V   + ++ +     D   
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y  L+N L   G   +A +L D M+ KG  P+   +G+L+
Sbjct: 311 YGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILI 350



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A ++  ++ S  F+L +  FN+++GA+ +  R   D + ++  +   G+VP+V T  
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRN-EDAMHLFATISSYGLVPDVFTYC 697

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            + E L E   +E   D F  M K G  PNSR    +++ L+    +  + + L ++ + 
Sbjct: 698 LIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEK 757

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
              LE S    +I +L R+     A  L +  R L+
Sbjct: 758 NFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLN 793


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 230/525 (43%), Gaps = 42/525 (8%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           + G  D  F +  E+ ++GI P V T N L++ L ++ R+E A     RM +    P+  
Sbjct: 223 RAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIV 282

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TF I+I GL    +  +  ++L EM   GI      Y  +I   CR+    EA++LF  M
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG--------------------- 337
            +  +    +TY  +   LC+   ++ A  IL++M++ G                     
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGR 402

Query: 338 ---------------LTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNA 378
                          L P D +    ++ LC+ GK +E+       L    G   +  NA
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C       A  +L+ M +  +  D  ++NI I+  C+  ++ +A +L   M+   
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             PD  T++ F+   C L   E+ L +  Q+ ++ L  D ++Y  +++G C+ + + +A 
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E    + KNG   ++  +N LI G      +  AI +      +G   T  TY  +M  +
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWM 642

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
                 +++  V AQ +V+   L V  Y I+IQ   +  K+ +  ++F  M   G+ P++
Sbjct: 643 CHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNK 702

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
            T  +L+   +        S   +++VS   V DS  YN LI+G 
Sbjct: 703 MTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 214/458 (46%), Gaps = 20/458 (4%)

Query: 77  SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS 136
           S ALK+F  + + K  + T  TY  +   L   G +E  E +   M+      V  +L +
Sbjct: 333 SEALKLFDEM-VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGM-MVHCSLFN 390

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE--KRG-FADFVFVYKEM 193
            V ++  H R  G + +++ +        +   + ++ A ++E  K G   +   ++ ++
Sbjct: 391 SVVAW--HLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           +  G+  NV T N L+  L + N ++ A    + M   G   +  T+ I+I+G    S++
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           D+++ +  +M   G + +L  +   +   C   K+EE + L   M++  L PD +TY  +
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGY 371
           I+  C+   +  AN+ L +++  GL P   ++  ++ G    G   +++  L+     G 
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGI 628

Query: 372 VTSP--HNALLECCCNAG-----KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
             +P  +N+L+   C+AG     K   A+CI++ +    I     + I I+  C+  +I 
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIG----YTIIIQGFCKIGKID 684

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A      M    + P+  TY+  +    K  N E+A ++F ++ +  +V DS+SY+ L+
Sbjct: 685 EAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLI 744

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            G C+V+ + + VE    MS         S+N  + G+
Sbjct: 745 SGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 120/587 (20%), Positives = 221/587 (37%), Gaps = 83/587 (14%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           L+  L     L  A K+F  +   K       TY  MI  L  AG ++    +   +   
Sbjct: 181 LVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAEL--- 237

Query: 126 RYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           R   ++  +++   L+ +     RV  A R+   M  G  + S+  F +++  +   ++ 
Sbjct: 238 RRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQ- 296

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F +   V +EM   GI PN    N ++           AL  F  M  KG      T+ +
Sbjct: 297 FGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNL 356

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFY--------------------------- 275
           + K L     ++ +  IL EM   G+ +  S +                           
Sbjct: 357 IAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLAR 416

Query: 276 ---------TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
                    T  I  LC+  K EEA  ++  +    L  +  T   LI+ LC+   + +A
Sbjct: 417 FLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEA 476

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLEC 382
             +L+ M+  G+      +  +++G C+  K DE++   +D       P     N  L  
Sbjct: 477 TKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHT 536

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            CN GK      +L++M    +  D  ++   I   C+ +++ KA E L  ++ + + P+
Sbjct: 537 YCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPN 596

Query: 442 CATYSAFVLGKCKLCNYEDAL-----------------------------------RVFR 466
              Y+A + G  +  N  DA+                                    VF 
Sbjct: 597 AVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFA 656

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           Q   + + L  I Y+ +++G C++ KI EAV  F  M   G   +  ++  L++      
Sbjct: 657 QCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSG 716

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
             ++A +L     S G    + +Y  ++ G  ++     ++   A+M
Sbjct: 717 NKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEM 763



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 1/203 (0%)

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT-SYTTSTYT 551
           ++ A + F  +S  G S S  + +IL+  L    ++D A ++        T +    TYT
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYT 215

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++  L +         +LA++   G    V  Y +L+ ++ +  ++++       MV+ 
Sbjct: 216 AMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEG 275

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            + P   T   L+ GLA G Q   V + + ++       +  +YN +I    ++G  S+A
Sbjct: 276 RVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEA 335

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             L D M+ KG      T+ L+ 
Sbjct: 336 LKLFDEMVSKGIKQTVVTYNLIA 358


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/513 (23%), Positives = 234/513 (45%), Gaps = 33/513 (6%)

Query: 82  IFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL---- 137
            F+W   +  FQH   T C  +L++ +               +E Y   ++ L++L    
Sbjct: 3   FFQWAKARPGFQHNTYT-CNSLLEVFVNDGCH----------REAYRVFKDELVTLFRPD 51

Query: 138 -------VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-V 189
                  +  F    ++  A+ +L  M + G   ++  F  ++  + E    F D    +
Sbjct: 52  DFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCE--LNFTDKALQI 109

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           + +M+   + P+      ++  L + N+++ A   F RM + GC P+  T+ +++  L  
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             + +    I  EM   G   EL  Y  ++   C+  ++++A+ L + ++     P    
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFL 365
           Y  LI+ LC++ R D+A ++ E  +  G      V+   + GLC+ GK DE+    V  +
Sbjct: 230 YSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIR 424
           E  C      +N ++   C   +   AK ++++  +RK +       + +  LC++  + 
Sbjct: 288 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVE 347

Query: 425 KAYELLGRMV-VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           +A  +L RM+      P   TYSA + G CK    +DA  V +++     V D ++Y+ +
Sbjct: 348 EACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAI 407

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++  C+V ++ EA E+F  M + GC+L   ++NILI G C   KVD+AI +       G 
Sbjct: 408 IDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 467

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
                + + I+ GL K  R ++  +++ +M  E
Sbjct: 468 QPNVVSLSTIVDGLCKESRVEEARLLMEKMNFE 500



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 219/528 (41%), Gaps = 37/528 (7%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G   N  T N LLEV         A   F+        P+  T+  +I+G     ++ 
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +V++LGEM   GI   +  +  +I  LC  N  ++A+++F  M  + + PD   Y  +I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
             LC+  +LD A    E M+  G  P    +  +V  L +  K+++     E+      S
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           P                                 ++   +   C+   I +A  L+ R+ 
Sbjct: 190 PELV------------------------------TYATVVNGYCKAGRIDQALSLMRRLK 219

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            +   P  + YS  + G CK   +++A  +F   +    V D I Y+  + GLC+  K+ 
Sbjct: 220 GTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLD 277

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA  V   M + GC+    S+N++IY LC   +V +A  L   A            T ++
Sbjct: 278 EAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLV 337

Query: 555 LGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
            GL K +R ++  V+L +ML  G  A  V  Y  +I  + + ++L D  +    M +AG 
Sbjct: 338 DGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGC 397

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
           VPD  T  +++       +L        ++      LD   YNILI G  +     +A  
Sbjct: 398 VPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIA 457

Query: 674 LLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDSSSF---PDS 717
           +++ M G+G  P+  +   +V     E  ++  R   +  +F   PDS
Sbjct: 458 MIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPDS 505



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 196/421 (46%), Gaps = 4/421 (0%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM  AGI P + T   L+  L E N  + AL  F +M      P++  + +VI  L   +
Sbjct: 77  EMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 136

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++D + S    M   G   +   YT ++  L +  K E+  ++F+ M +    P+ +TY 
Sbjct: 137 KLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYA 196

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            ++N  C+  R+D A  ++  +   G +P+  ++  ++ GLC+  + DE+    E   G 
Sbjct: 197 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD 256

Query: 372 VTSP--HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYE 428
           V     + + +   C AGK   AK +  KM +   A D  S+N+ I  LC++  + +A E
Sbjct: 257 VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 316

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGL 487
           L+ + +    +P     +  V G CK    E+A  +  R +         ++YS +++GL
Sbjct: 317 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGL 376

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+ +++ +A  V   M + GC     ++  +I   C + ++D+A  L    +  G +   
Sbjct: 377 CKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDV 436

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             Y  ++ G  +  +  + + ++ +M   G   +V +   ++  + +++++++  L    
Sbjct: 437 VAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEK 496

Query: 608 M 608
           M
Sbjct: 497 M 497



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 114/246 (46%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y   I  L  AG ++E + +   M++        +   +++S     RV+ A  ++    
Sbjct: 263 YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAM 322

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
                  V V  V++  + + +R     V + + +      P+V T + +++ L + +R+
Sbjct: 323 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRL 382

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           + A    ++M + GC P+  T+  +I       R+D++  +   M + G  L++  Y  +
Sbjct: 383 DDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNIL 442

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I   CR  K++EAI + + M    + P+ ++   +++ LC+  R+++A  ++E M    L
Sbjct: 443 IRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESL 502

Query: 339 TPTDDV 344
             +D V
Sbjct: 503 PDSDPV 508


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/519 (25%), Positives = 242/519 (46%), Gaps = 42/519 (8%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           K++   GI  N+ TLN ++       +   A     ++ K G  P++ TF  +IKGL   
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +V ++V ++  M + G Q ++  Y  I+  +CR      A+ L + M   ++  D  TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +I+ LC +  +D A  + ++M   G+  +   +  +VRGLC+ GK+++    L+D   
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 371 YVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P+    N LL+     GK   A  + ++M  R I+ +  ++N  +   C    + +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +L  MV +   PD  T+++ + G C +   +D ++VFR +S + LV ++++YS LV+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G CQ  KI  A E+F  M  +G      ++ IL+ GLC   K++KA+ +           
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI----------- 460

Query: 546 TTSTYTKIMLGLVKLQRAK-DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                         LQ++K DL +V+              Y  +I+ M +  K++D    
Sbjct: 461 -----------FEDLQKSKMDLGIVM--------------YTTIIEGMCKGGKVEDAWNL 495

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  +   G+ P+  T   ++ GL     L   +  + K+  D    +   YN LI    +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
           +G  + ++ L++ M   G+  DA++  +++   +  E+D
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELD 594



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 199/411 (48%), Gaps = 8/411 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  VL  +   G++     FN ++  +  E +  ++ V +   MV+ G  P+V T N ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK-VSEAVVLVDRMVENGCQPDVVTYNSIV 200

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             +  +     ALD  R+M ++    +  T+  +I  L  +  +D ++S+  EM   GI+
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y  ++  LC+  K  +   L K M + +++P+ +T+  L++   +  +L +AN++
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCN 385
            ++MI  G++P    +  ++ G C   +  E+ N L+    +KC        +L++  C 
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             +      +   ++ R  +A+  +++I ++  C++ +I+ A EL   MV   V+PD  T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y   + G C     E AL +F  +    + L  + Y+ ++EG+C+  K+ +A  +FC + 
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIM 554
             G   +  ++ ++I GLC    + +A I LR +    G +    TY  ++
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-EDGNAPNDCTYNTLI 550



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 218/519 (42%), Gaps = 22/519 (4%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESAL------------DQFRRMHKKGCCPNSRTF 240
           M+K  I  N+  L  +   L +T  + + L              F  +     C   R  
Sbjct: 2   MIKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRER-- 59

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
              ++  I + + DD++++  EM        L  ++     + R  +    +   K +  
Sbjct: 60  ---LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL 116

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             +  +  T   +INC C   +   A  +L  ++ +G  P    F  +++GL   GK  E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176

Query: 361 SV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
           +V      +E+ C      +N+++   C +G   LA  +L KM +R + AD  +++  I 
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC +  I  A  L   M    +     TY++ V G CK   + D   + + + ++ +V 
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           + I+++ L++   +  K+ EA E++  M   G S +  ++N L+ G C+  ++ +A  + 
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            L   +  S    T+T ++ G   ++R  D + V   +   G   +   Y IL+Q   + 
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+K     F  MV  G++PD  T   LL GL D  +L         L      L   MY
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +I G+ K G    A  L   +  KG  P+  T+ +++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 223/500 (44%), Gaps = 42/500 (8%)

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           AG+ PN  TLN L+    +  R++       +  K G  P   TF  +I GL    +   
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +V +  +M   G Q +   YT II  LC+  +   A  LFK M       + +TY  LI+
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+  R+++A DI   M    ++PT   +  +++GLC   ++ E+   L +       P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183

Query: 376 H----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
           +    N L++  C  GK   A+ +L+ M +  +  D  ++N  +       E+ +A +L 
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+     PD  +YS  + G CK    ++A ++F ++  Q    +++SY+ L+ GLCQ+
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTST 549
            ++ EA ++F  M  NG   +  ++ IL+ G C    + KA RL R++          ST
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQ---------ST 354

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y K  L +                           Y IL+ +M +   LKD    F+ + 
Sbjct: 355 YLKPNLVM---------------------------YNILVNAMCKSGNLKDARELFSELF 387

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             GL P+ +   ++++GL     L         +  D    D   YN++I G  +    S
Sbjct: 388 VIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDES 447

Query: 670 QASYLLDLMLGKGWVPDATT 689
           +A +L+  M  +G++ DA T
Sbjct: 448 RAVHLIGEMRDRGFITDAGT 467



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 192/451 (42%), Gaps = 46/451 (10%)

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    L P+  T   LINC C+  R+D    +L   I +GL PT   F  ++ GL +VGK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----S 409
           F ++V   +D       P    +  ++   C  G+  LA  + +KM +   A C     +
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEE---AGCQLNVVT 117

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           ++  I  LC+   + +A ++   M    + P   TY++ + G C    +++A  +  +++
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 470 AQSLVLDSISYSKLVEGLCQVEKI--------------------------------TEAV 497
           + +++ + ++++ LV+  C+  K+                                TE V
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 498 E---VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           E   +F  M   GC     S++ILI G C  +++D+A +L +     G++    +Y  ++
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL +L R ++   +   M   G   ++  Y IL+    +Q  L      F  M    L 
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P+      L++ +     L       ++L       +  +Y  +INGL KEGL  +A   
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 675 LDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
              M   G  PD  ++ +++   +  + +SR
Sbjct: 418 FRNMEDDGCPPDEFSYNVIIRGFLQHKDESR 448



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 164/390 (42%), Gaps = 54/390 (13%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK- 124
           LI  L     ++ AL IF ++   K    T  TY  +I  L      +E   L   M   
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMK-AKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA------IVE 178
              PNV    + LV +F    +V  A  VL  M   G +  V  +N ++        +VE
Sbjct: 180 NIMPNVVTFNV-LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            ++       ++  M+  G  P+V + + L+    +  RI+ A   F  M  +G  PN+ 
Sbjct: 239 ARK-------LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNV 291

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++  +I GL    R+ ++  +   M   G    L  Y  ++   C++  L +A RLF+ M
Sbjct: 292 SYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAM 351

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           ++  L P+ + Y  L+N +C++  L DA ++  ++ VIGL P   ++  I+ GLC+ G  
Sbjct: 352 QSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLL 411

Query: 359 DESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
           DE++    N  +D C     P +                               S+N+ I
Sbjct: 412 DEALEAFRNMEDDGC-----PPDEF-----------------------------SYNVII 437

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           R   ++++  +A  L+G M     + D  T
Sbjct: 438 RGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/555 (23%), Positives = 254/555 (45%), Gaps = 12/555 (2%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           A  +LV  +  + +++ A R++ +M       +   +  ++  + +  R   + + +  +
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMPVAPDAYT---YTPIIRGLCDRGR-VGEALSLLDD 170

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  G  P+V T   LLE + ++     A++    M  KGC PN  T+ ++I G+    R
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+   L  +   G Q +   YT ++  LC   + E+   LF  M   + MP+E+T++ 
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+   C    ++ A  +LE M   G      +   ++  +C+ G+ D++  FL +   Y 
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
            SP    +  +L+  C A ++  AK +L++M  +     + ++N  I  LC+   I +A 
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L+ +M       +  TY+A V G C     + AL +F  +  +    ++I+Y+ L+ GL
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP---NTITYTTLLTGL 467

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C  E++  A E+   M +  C+ +  +FN+L+   C    +D+AI L       G +   
Sbjct: 468 CNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL 527

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ G+     +++ L +L  ++  G + D+  Y  +I  +S ++++++    F++
Sbjct: 528 ITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHI 587

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +   G+ P       +L  L               +VS+  + +   Y  LI GL  E  
Sbjct: 588 VQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDF 647

Query: 668 TSQASYLLDLMLGKG 682
             +   LL  +  +G
Sbjct: 648 LKETRDLLRELCSRG 662



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 128/598 (21%), Positives = 252/598 (42%), Gaps = 43/598 (7%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ +     R + A RVL      G  + V  +N ++         +       + +   
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR----YGQLDAARRLIASM 139

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            + P+  T   ++  L +  R+  AL     M  +GC P+  T+ ++++ +  ++    +
Sbjct: 140 PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + +L EM   G    +  Y  II  +CRE ++++A      + +    PD ++Y  ++  
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 259

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   R +D  ++  +M+     P +  F  +VR  C  G  + ++  LE   G+  + +
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
             L                               NI I  +C+   +  A++ L  M   
Sbjct: 320 TTL------------------------------CNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              PD  +Y+  + G C+   +EDA  + +++  ++   + ++++  +  LCQ   I +A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             +   MS++GC ++  ++N L+ G CV  +VD A+    L YS      T TYT ++ G
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL---ELFYSMPCKPNTITYTTLLTG 466

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L   +R      +LA+ML + CA +V  + +L+    ++  + +       M++ G  P+
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +LL G+ +          ++ LVS+    D   Y+ +I  L +E    +A  +  
Sbjct: 527 LITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586

Query: 677 LMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVSDI-LAEGLGN 728
           ++   G  P A  +      L    +    ID   +   +   P+ ++ I L EGL N
Sbjct: 587 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 644



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 219/492 (44%), Gaps = 48/492 (9%)

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           ++ LIA   + ++  ++      G   ++   T +I  LCR  +  +A R+ +       
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             D   Y  L+   C   +LD A  ++  M V    P    +  I+RGLC+ G+  E+++
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALS 166

Query: 364 FLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
            L+D     C      +  LLE  C +  F  A  +L++M  +    +  ++N+ I  +C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
               +  A E L R+      PD  +Y+  + G C    +ED   +F ++  ++ + + +
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           ++  LV   C+   +  A++V   MS +GC+ +++  NI+I  +C   +VD A +  +  
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQR---AKDLL---------------------------- 567
            S G S  T +YT ++ GL + +R   AK+LL                            
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406

Query: 568 ----VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC-ALFFNVMVKAGLVPDRETMLS 622
               +++ QM   GC +++  Y  L+     Q ++     LF+++  K    P+  T  +
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTT 462

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           LL GL +  +L   +  + +++      +   +N+L++   ++GL  +A  L++ M+  G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 683 WVPDATTHGLLV 694
             P+  T+  L+
Sbjct: 523 CTPNLITYNTLL 534


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 153/656 (23%), Positives = 286/656 (43%), Gaps = 19/656 (2%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALIS 136
           SAL +F+  S  K   H+A  +  ++ +L     +        ++VK ++ P   +  ++
Sbjct: 28  SALSLFESASRNK--SHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALT 85

Query: 137 LVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVVLGAIVE--EKRGFADFVFVYKEM 193
           ++ ++  +   N A+    NM    G K  V  +N +L A VE  E      F   ++ M
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
               + PN+ T N L+++  +  +IE A+     M  +   P+  ++  +I G++    +
Sbjct: 146 ---DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDL 202

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEE 312
             ++ +  EM   G+  +++ Y  +I    +    ++   ++ ++++   + P+ +TY  
Sbjct: 203 LGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNI 262

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLEDK 368
           +IN LC+  R D++ +I E M           +  ++ GLCE G  D +V      +E  
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                  HNA+L   C AGK   +  +   M         S+NI I+ L EN ++ +A  
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAIS 382

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   +      P+  TY   + G CK      AL++F++       LD+ +YS +V+GLC
Sbjct: 383 IWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLC 442

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  ++ EA+ +   M K G  L     N LI G     K++ AI         G S T  
Sbjct: 443 KEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIV 502

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +Y  ++ GL K +R  +    + +ML +    D+    +L+  + ++ K++     +   
Sbjct: 503 SYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQA 562

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           +  G  PD      L+HGL    +L       + +   + V +    N L+ GL+K    
Sbjct: 563 LDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDY 622

Query: 669 SQASYLLDLMLGKGWVPD-----ATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            +AS + D +L  G  PD      T  GL   S + + I+    A +    P +V+
Sbjct: 623 EKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVT 678



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 244/517 (47%), Gaps = 20/517 (3%)

Query: 59  HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL--AGN 111
            NL PD      LI  +    DL  ALK+F  +S++      AD  C  +L  G    G+
Sbjct: 180 QNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGV---VADVTCYNMLIDGFFKHGD 236

Query: 112 VEEMEGLCQNMVKE--RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
            ++ + + + +VK+   YPNV    I ++       R + ++ +   M     +  +  +
Sbjct: 237 YDKGKEIWERLVKDCSVYPNVVTYNI-MINGLCKCGRFDESLEIWERMTKNEREKDMFTY 295

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           + ++  + E        V VYKE+V++ +V +  T N +L       +I+ + + +  M 
Sbjct: 296 SSLIHGLCEAG-NIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMG 354

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K+ C     ++ I+IKGL  N +V++++SI   +   G + E + Y  +I  LC+  +L 
Sbjct: 355 KENC-QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLN 413

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A+++FK         D   Y  +++ LC+  R+D+A  I+  M   G      V   ++
Sbjct: 414 KALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLI 473

Query: 350 RGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI- 404
            G     K ++++NF  +     C      +N L++  C A +F  A   +++M +++  
Sbjct: 474 NGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWK 533

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  + ++ +  LC+ ++I  A  L  + +     PD   Y+  + G C +C  EDAL++
Sbjct: 534 PDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQL 593

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           +  +   + V + ++ + L+EGL +V    +A E++ C+ K+G      S+NI I GLC 
Sbjct: 594 YSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCS 653

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
             ++  AI   + A + G   T  T+  ++   V  +
Sbjct: 654 CSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFR 690


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/566 (23%), Positives = 253/566 (44%), Gaps = 55/566 (9%)

Query: 29  CANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLD-NTNDLS--SALKIFKW 85
           C + I L++ ++ IK   T    + ++ +  +L+P+HLI +++ N + LS  S L  FKW
Sbjct: 34  CHDPI-LTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKW 92

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
           +S Q  F+ +  +YC M   L     + E + L Q +V  +  N   ++ + V       
Sbjct: 93  LSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSV------- 145

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
                      + + G   S  VF+V++ A  +    F+D +  ++ + K  +     + 
Sbjct: 146 -----------LEARGTHQSNLVFSVLMNAYTDSGY-FSDAIQCFRLVRKHNLQIPFHSC 193

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
            YL + L + N    A   +  +   G  P+   F +++  L    +++++  + GE+  
Sbjct: 194 GYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK 253

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G++  +  +  +I   C+   L++  RL + M    + PD  TY  LIN LC+  +LDD
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           AN +  +M   GL P D  F  ++ G C  G+ D                          
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRAD-------------------------- 347

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                L   I ++M  + +  D  ++N  I  LC+  ++R+A +L+  M    + PD  T
Sbjct: 348 -----LGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK  + E AL + +++  + + LD+++++ L+ G C+  ++ EA      M 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           + G     +++ ++I+G C    V    +L       G      TY  ++ GL K  + K
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQ 590
           +  ++L  ML  G   D   Y IL++
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 3/329 (0%)

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           CGY       N L+   C   K   A+ +  ++  R +     S+N  I   C++  + +
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            + L   M+ + V PD  TYS  + G CK    +DA ++F ++  + LV + ++++ L+ 
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G C   +    +E++  M + G      ++N LI GLC +  + +A +L       G   
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TYT ++ G  K    +  L +  +M+ EG  LD  A+  LI     + ++ +     
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M++AG+ PD  T   ++HG      +      + ++  D  V     YN+L+NGL K+
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G    A+ LLD ML  G VPD  T+ +L+
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILL 547


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 237/505 (46%), Gaps = 28/505 (5%)

Query: 192 EMVKAGIVPNVDTLNYLLEV-LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           E+   G+   V+T N++L V L + +    A   F  M   G  P++R+F  ++ G    
Sbjct: 138 ELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQE 194

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R +++ ++L  M+  G  L+ +  T ++   CR+ +  +   LF  M  +   P+ + Y
Sbjct: 195 GRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNY 254

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---LED 367
              ++ LC+   +  A  +LE+M+  GL P       ++ GLC++G  + +      L  
Sbjct: 255 TAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVK 314

Query: 368 KCGYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
              Y  + H    ++   C  GK   A+ +L +M ++ +A + +++   I   C      
Sbjct: 315 SSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFD 374

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+EL+ +M +   +P+  TY+A + G CK    + A +V R  ++Q L  D ++Y+ L+
Sbjct: 375 RAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLI 434

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              C+   IT A+++F  M++N C     ++  +I   C  R+++++ +L     S G  
Sbjct: 435 TEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLV 494

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
            T  TYT ++ G  ++ ++   L V  +M+  GC  D   Y  LI  + ++++L++    
Sbjct: 495 PTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARAL 554

Query: 605 FNVMVKAGLVP---------------DRETM-LSLLHGLADGSQLHLVSSGINKLVSDSE 648
           F  M+   +VP               D+ T+ +S L GL    Q H   + + KL +   
Sbjct: 555 FETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADALVRKLSAVDN 614

Query: 649 VLDSSMYNILINGLWKEGLTSQASY 673
           +  +S++  L N L K      A+Y
Sbjct: 615 LDAASLF--LKNVLDKHYAVDHATY 637



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/447 (21%), Positives = 187/447 (41%), Gaps = 35/447 (7%)

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE-NKLEEAIRLFKMMRALDLMPDEL 308
            +R+ ++  +L E+   G+ L +     ++ +  R+ +    A + F  M    + PD  
Sbjct: 126 TNRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDAR 182

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           ++  L+   C+  R ++A+ +L  M   G +        +VR  C  G+F + V  L  +
Sbjct: 183 SFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRD-VPGLFGR 241

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
              + +P N                          + +  +W   +  LC+   +++A+ 
Sbjct: 242 MVEMGNPPN--------------------------VVNYTAW---VDGLCKRGYVKQAFH 272

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGL 487
           +L  MV   + P+  T+++ + G CK+   E A R+F + V + S   +  +Y+ ++ G 
Sbjct: 273 VLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGY 332

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+  A  +   M + G + +++++  LI G C     D+A  L +     G     
Sbjct: 333 CKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNI 392

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  I+ G  K  + +    VL     +G   D   Y +LI    +Q  +      FN 
Sbjct: 393 YTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQ 452

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M +    PD +T  +++       Q+       +K +S   V     Y  +I G  + G 
Sbjct: 453 MAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGK 512

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++ A  + + M+  G +PD  T+G L+
Sbjct: 513 STSALKVFERMVQHGCLPDPITYGALI 539


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 210/504 (41%), Gaps = 30/504 (5%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F +   V  EM K  + P+V T N +++  F    +E+A+     M  KG  P   T+  
Sbjct: 175 FGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNS 234

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           V+KGL+ N R D +  +   M   G+  ++  +  +I   CR  +LEEA+R +K MR   
Sbjct: 235 VLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR 294

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD +++  LI        +D A + L +M   GL P   ++  ++ G C  G   E++
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEAL 354

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
              ++   +   P                              D  ++N  +  LC+   
Sbjct: 355 RVRDEMVAFGCLP------------------------------DVVTYNTLLNGLCKERR 384

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A ELL  M    V PD  T++  + G C+  N E AL+ F  +S Q L  D ++Y+ 
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++G+C+   + +A E++  M       +  +++ILI   C   +VD A        + G
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY  I+ G  +          L +M  +    D+  Y  LI    ++ K+ +  
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
               +M    + PD  T   ++ G +    +        K+ +     D   Y  +ING 
Sbjct: 565 NLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGH 624

Query: 663 WKEGLTSQASYLLDLMLGKGWVPD 686
              G + ++  L D ML KG  PD
Sbjct: 625 VVAGNSKKSFQLHDEMLQKGLAPD 648



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 180/440 (40%), Gaps = 48/440 (10%)

Query: 271 ELSFYT--CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           E++ YT   ++   C+  +  E   +   M    + PD +T+  +++       ++ A  
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCC 384
           +++ M+  G+ P    +  +++GL   G++D++       D CG        N L+   C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            AG+   A    ++M  R++  D  S++  I       E+  A E L  M    ++PD  
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+  + G C+     +ALRV  ++ A   + D ++Y+ L+ GLC+  ++++A E+   M
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---L 560
            + G      +F  LI+G C    ++KA++               TY  ++ G+ +   L
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            +A +L      M       +   Y ILI S  E+ ++ +   F + MV  G+VP+  T 
Sbjct: 456 GKANELW---DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMT- 511

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
                                             YN +I G  + G  S+    L  M  
Sbjct: 512 ----------------------------------YNSIIKGYCRSGNVSKGQQFLPKMRH 537

Query: 681 KGWVPDATTHGLLVGSSVGE 700
              +PD  T+  L+   V E
Sbjct: 538 DKVMPDLITYNTLIHGYVKE 557



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 3/335 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N ++   C   +F     ++ +M  R +  D  + N+ +       ++  A  L+  MV 
Sbjct: 163 NIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVS 222

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P   TY++ + G  +   ++ A  VFR + A  +  D  S++ L+ G C+  ++ E
Sbjct: 223 KGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEE 282

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMR-KVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           A+  +  M     +    SF+ LI GL   R ++D A          G       YT ++
Sbjct: 283 ALRFYKEMRGRRVTPDVVSFSCLI-GLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G  +     + L V  +M+  GC  DV  Y  L+  + ++ +L D     N M + G+ 
Sbjct: 342 GGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVP 401

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  T  +L+HG      +       + +       D   YN LI+G+ ++G   +A+ L
Sbjct: 402 PDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANEL 461

Query: 675 LDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
            D M  +   P+  T+ +L+ S   +      FAF
Sbjct: 462 WDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAF 496



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 68/348 (19%), Positives = 136/348 (39%), Gaps = 53/348 (15%)

Query: 2   AIKLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLR-HN 60
            + L +L + ++++ +     C+  +   NT+       + K  + +D E  +  ++   
Sbjct: 348 GLMLEALRVRDEMVAF----GCLPDVVTYNTL----LNGLCKERRLSDAEELLNEMKERG 399

Query: 61  LSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEM 115
           + PD      LI       ++  AL+ F  +S Q R +    TY  +I  +   G++ + 
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ-RLRPDIVTYNTLIDGMCRQGDLGKA 458

Query: 116 EGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
             L  +M  +E +PN     I L+ S     +V+ A   L  M + G   ++  +N ++ 
Sbjct: 459 NELWDDMHSREIFPNHVTYSI-LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
                        F+ K M    ++P++ T N L+    +  ++  A +  + M  +   
Sbjct: 518 GYCRSGNVSKGQQFLPK-MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ 576

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P++ T+ ++I G           S+ G M                         +EA  +
Sbjct: 577 PDAVTYNMIISGF----------SVHGNM-------------------------QEADWV 601

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           +K M A  + PD  TY  +IN          +  + ++M+  GL P D
Sbjct: 602 YKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 231/507 (45%), Gaps = 27/507 (5%)

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIV 199
           FV   R + A+ +   M      L++  FN+++    +  K  F+  +  + ++ K G  
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTKLGFQ 173

Query: 200 PNVDTLNYLLEVLFETNRIESALDQF---------------RRMHKKGCCPNSRTFEIVI 244
           P+V T N LL  L   +RI  AL  F                +M + G  P   TF  +I
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GL    RV ++ +++ +M   G+ +++  Y  I+  +C+    + A+ L   M    + 
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD + Y  +I+ LC++    DA  +  +M+  G+ P    +  ++ G C  G++ ++   
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L D      +P     NAL+      GK F A+ + ++M  R I  D  ++N  I   C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           +     A  +   M      PD  T++  +   C+    ++ +++ R++S + LV ++ +
Sbjct: 414 HNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ G C+V+ +  A ++F  M  +G    + + NIL+YG C   K+++A+ L  +  
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            S     T  Y  I+ G+ K  +  +   +   + + G   DV+ Y ++I     ++ + 
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHG 626
           D  + F+ M   G  PD  T  +L+ G
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRG 616



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/571 (21%), Positives = 243/571 (42%), Gaps = 59/571 (10%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME-GLCQ 120
           S  H  + LD+      A+  F ++   + F    D  C  ++ + +  N  ++   L +
Sbjct: 79  SGSHYFKSLDD------AIDFFDYMVRSRPFYTAVD--CNKVIGVFVRMNRPDVAISLYR 130

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M   R P    +   L+  F + ++++ ++     +   GF+  V  FN +L  +  E 
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 181 R--------------GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           R              GF + V ++ +MV+ G+ P V T N L+  L    R+  A     
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M  KG   +  T+  ++ G+        ++++L +M +  I+ ++  Y+ II  LC++ 
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT----- 341
              +A  LF  M    + P+  TY  +I+  C   R  DA  +L DMI   + P      
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 342 -------------------DD-----VFVDIVR------GLCEVGKFDESVNFLEDKCGY 371
                              D+     +F D V       G C+  +FD++ +  +     
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
                N +++  C A +      +L +++ R  +A+  ++N  I   CE + +  A +L 
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+   V PD  T +  + G C+    E+AL +F  +    + LD+++Y+ ++ G+C+ 
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+ EA ++FC +  +G      ++N++I G C    +  A  L      +G     STY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
             ++ G +K       + ++++M   G + D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 22/252 (8%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ ++R++  + + L+  S++ L++  C   K++ ++  F  ++K G      +FN L++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC+  ++ +A+ L    Y   T +  +                  + +  QM+  G   
Sbjct: 185 GLCLEDRISEALAL--FGYMVETGFLEA------------------VALFDQMVEIGLTP 224

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            V  +  LI  +  + ++ + A   N MV  GL  D  T  ++++G+          + +
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
           +K+       D  +Y+ +I+ L K+G  S A YL   ML KG  P+  T+  ++    S 
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 699 GEEIDSRRFAFD 710
           G   D++R   D
Sbjct: 345 GRWSDAQRLLRD 356



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G    + +D AI        S   YT     K++   V++ R    + +  +M +    L
Sbjct: 80  GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL------- 633
           ++ ++ ILI+   + +KL      F  + K G  PD  T  +LLHGL    ++       
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 634 -HLVSSG-------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            ++V +G        +++V          +N LINGL  EG   +A+ L++ M+GKG   
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259

Query: 686 DATTHGLLV 694
           D  T+G +V
Sbjct: 260 DVVTYGTIV 268



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 41/218 (18%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVD 203
           RV+  M++L  ++  G   +   +N ++     V+      D   +++EM+  G+ P+  
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD---LFQEMISHGVCPDTI 503

Query: 204 TLNYLLEVLFETNRIESALDQFR--RMHK------------KGCC--------------- 234
           T N LL    E  ++E AL+ F   +M K             G C               
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 235 ------PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
                 P+ +T+ ++I G    S + D+  +  +M D G + + S Y  +I    +  ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           +++I L   MR+     D  T + + + + +  RLD +
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIKMVADLITDG-RLDKS 660


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 228/512 (44%), Gaps = 50/512 (9%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+K  V  +N +L  +V+    F     VYK+++ +G  PN+ T   L+    +  +   
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGK-VYKDLLHSGCSPNLVTFKILIRGNCKAGQATR 80

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL+  R + +    P+   F  +I GL  +   D +V +   M    +  ++  Y  +I 
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVIS 140

Query: 281 MLCRENKLEEAIRLFKMM--RALDLMPDELTYEELINC-LCENLRLDDANDILEDMIVIG 337
            LC+   LE+A  L + M  R     PD +TY  LIN  +C++  +++A +IL+ M + G
Sbjct: 141 GLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAG 200

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSPHNALLECCCNAGKFFLAKCIL 396
             P    +  I+  LC  G+  E+   L+   C       N LL+  C AG    A  +L
Sbjct: 201 PAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVL 260

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M    I  D  ++ I +  LC   +++ A+ LL  +V    +PD   Y++ V G CK 
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 456 CNYEDALRVFRQVSAQSL------------------------------------------ 473
              E+A ++ +++SA+ +                                          
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 380

Query: 474 --VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
             V D ++Y+ L++GLC+  ++ EA ++   M+  GC  +  +   +++GLC + +VD A
Sbjct: 381 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDA 440

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             L         +     YT ++ GL K  R  D  VVL  M  +G ALD  AY  LI S
Sbjct: 441 WSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVS 500

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           M    ++ +    ++ MV  G +PD  T  +L
Sbjct: 501 MIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 235/509 (46%), Gaps = 18/509 (3%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G   +V + N+LL++L ++         ++ +   GC PN  TF+I+I+G     +   +
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +  L  + +  +  ++  +  +I  L ++   ++A++LF+ M +  + PD  TY  +I+ 
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVD---IVRGLCEVGKFDESVNFLEDKCGYVT 373
           LC++  L+ A ++LE+MI  G     D+      I  G+C+ G  +E++  L+       
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
           +P    +N+++   C AG+   A  IL+ M+     D  ++N  +   C+   + +A E+
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTMSCSP--DLVTFNTLLDGFCKAGMLPRALEV 259

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M   +++PD  TY+  V G C++   + A  +  ++  Q  + D I+Y+ LV+GLC+
Sbjct: 260 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 319

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSS---------FNILIYGLCVMRKVDKAIRLRSLAYS 540
             +I EA ++   MS         S         +NI++ GL     + KA+ L S   +
Sbjct: 320 SGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 379

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G      TY  ++ GL K  R ++   +  +M   GC  +      ++  +    ++ D
Sbjct: 380 RGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDD 439

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                  M +    P+     SL+ GL    ++      ++ +      LD   Y  LI 
Sbjct: 440 AWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIV 499

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATT 689
            +   G  ++A  + D M+ +G++PD +T
Sbjct: 500 SMIHGGRVAEAMAMYDEMVARGFLPDGST 528



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 12/253 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMR---- 152
           TY  ++  L   G V+    L + +V++ Y P+V  A  SLV        +  A +    
Sbjct: 274 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI-AYTSLVDGLCKSGEIEEAHKLVKE 332

Query: 153 -----VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
                +L  M S      +  +N+VLG ++++    +  V +  ++V  G VP+V T N 
Sbjct: 333 MSAREILAEMVSINMVPPLFTYNIVLGGLIKDG-SISKAVSLISDLVARGYVPDVVTYNT 391

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++ L + NR+  A D    M   GC PN  T   V+ GL    RVDD+ S++ EM    
Sbjct: 392 LIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKR 451

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
               +  YT +I  LC+ +++++A  +   MR   +  D+  Y +LI  +    R+ +A 
Sbjct: 452 HAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAM 511

Query: 328 DILEDMIVIGLTP 340
            + ++M+  G  P
Sbjct: 512 AMYDEMVARGFLP 524


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 246/532 (46%), Gaps = 22/532 (4%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  F  +LG I +  R +A  + +Y  M   G+VP   T N L+       +++ A   
Sbjct: 53  SIVEFTKILGTIAK-MRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSV 111

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             ++ K GC PN  TF  ++KG   N ++ D++ I  EM    I+ +   Y  +I  LC+
Sbjct: 112 MGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCK 171

Query: 285 E--NKLEEAIRLFKMMRALDLM-PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
               K   A++L + M    L+ P+ + Y  +++ LC++  +++A  +   MIV G+ P 
Sbjct: 172 SKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPD 231

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              +  ++ GLC  G+  E           VTS    LL   C   K   A+ +   M +
Sbjct: 232 IFTYSSLIYGLCRAGQRKE-----------VTS----LLNGFCLNNKVDEARELFNVMIE 276

Query: 402 R-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           R +  D  ++NI +   C N ++ +A +L   MV     PD  TY+  + G C +   ++
Sbjct: 277 RGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDE 336

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +F  +  + LV D  SY+ L++G C+ E++ EA+ +   M       +  ++N ++ 
Sbjct: 337 ARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVD 396

Query: 521 GLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE-GC 578
           GLC    +  A +L   + Y        +TY  ++  L +++  +  +     ++ E   
Sbjct: 397 GLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSF 456

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
           A +V +Y ILI    +  +L +    FN M    LVPD  T   LL  L +G QL    +
Sbjct: 457 APNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIA 516

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            + ++V      +   YNILINGL K G    A  +   +  +G+ PD  T+
Sbjct: 517 LLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 146/342 (42%), Gaps = 25/342 (7%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S  +P +  C+ + I  A  L  RMV    +P    ++  +    K+  Y  A+ ++  +
Sbjct: 21  SQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLM 80

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + +V  +++++ L+   C + ++  A  V   + K GC  +  +F  L+ G CV  K+
Sbjct: 81  EYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKM 140

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL---DVEAY 585
             A+ +     +    +    Y  ++ GL K +  K    V     +E   L   ++  Y
Sbjct: 141 LDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMY 200

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK--- 642
             ++  + +   + +  +  + M+  G+ PD  T  SL++GL    Q   V+S +N    
Sbjct: 201 NTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCL 260

Query: 643 -------------LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                        ++   E  D   YNIL+NG        +A  L  +M+ +G  PD  T
Sbjct: 261 NNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTIT 320

Query: 690 HGLLV-GSSVGEEIDSRRFAF----DSSSFPDSVS-DILAEG 725
           + +L+ G  + +++D  R  F    +    PD  S +IL +G
Sbjct: 321 YTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKG 362



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 145/308 (47%), Gaps = 9/308 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  M++ G   ++   N L+      N++  A   F  M ++G  P++ T+ I++ G  
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +VD++ ++   M + G+  ++  Y  +I   C+  ++ EA+ L + M   +L+P+ +
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI-VRGLCEVGKFDESVNF--- 364
           TY  +++ LC++  + DA  ++++M      P D    +I +  LC +   ++++ F   
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKH 449

Query: 365 --LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
              E         +N L+  CC   +   A  +   M  +  + D  ++NI +  L   +
Sbjct: 450 LIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQ 509

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ KA  LL ++V   + P+  TY+  + G  K    + A ++   +S +    D  +Y 
Sbjct: 510 QLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY- 568

Query: 482 KLVEGLCQ 489
            ++  LC+
Sbjct: 569 -IINELCK 575


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 229/476 (48%), Gaps = 13/476 (2%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREAL--ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
            G +EE     +NMV   + NV + +   +L+  F    +   A ++L  +   G    V
Sbjct: 115 TGELEEGFKFLENMV--YHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
             +NV++    +      +       + +  + P+V T N +L  L ++ +++ A++   
Sbjct: 173 ITYNVMISGYCKA----GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           RM ++ C P+  T+ I+I+    +S V  ++ +L EM D G   ++  Y  ++  +C+E 
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +L+EAI+    M +    P+ +T+  ++  +C   R  DA  +L DM+  G +P+   F 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++  LC  G    +++ LE    +   P    +N LL   C   K   A   LE+M  R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 403 K-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
               D  ++N  +  LC++ ++  A E+L ++      P   TY+  + G  K      A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           +++  ++ A+ L  D+I+YS LV GL +  K+ EA++ F    + G   ++ +FN ++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LC  R+ D+AI       + G   T ++YT ++ GL     AK+ L +L ++  +G
Sbjct: 529 LCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 197/424 (46%), Gaps = 8/424 (1%)

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G VP+V T N ++    +   I +AL    RM      P+  T+  +++ L  + ++  
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L  M       ++  YT +I   CR++ + +A++L   MR     PD +TY  L+N
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            +C+  RLD+A   L DM   G  P       I+R +C  G++ ++   L D      SP
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 376 H----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
                N L+   C  G    A  ILEKM       +  S+N  +   C+ +++ +A E L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            RMV     PD  TY+  +   CK    EDA+ +  Q+S++      I+Y+ +++GL + 
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K  +A+++   M        + +++ L+ GL    KVD+AI+        G      T+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTF 522

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             IMLGL K ++    +  L  M+  GC     +Y ILI+ ++ +   K+     N +  
Sbjct: 523 NSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCN 582

Query: 611 AGLV 614
            GL+
Sbjct: 583 KGLM 586



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 223/502 (44%), Gaps = 44/502 (8%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F F+ + MV  G VP++     L+       +   A      +   G  P+  T+ ++I 
Sbjct: 122 FKFL-ENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMIS 180

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G      +++++S+L  M    +  ++  Y  I+  LC   KL++A+ +   M   D  P
Sbjct: 181 GYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +TY  LI   C +  +  A  +L++M   G TP    +  +V G+C+ G+ DE++ FL
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
            D       P    HN +L   C+ G++  A+ +L  M  +  +    ++NI I +LC  
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             + +A ++L +M      P+  +Y+  + G CK    + A+    ++ ++    D ++Y
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++  LC+  K+ +AVE+   +S  GCS    ++N +I GL    K  KAI+       
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK------- 470

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                           L+   RAKDL              D   Y  L+  +S + K+ +
Sbjct: 471 ----------------LLDEMRAKDL------------KPDTITYSSLVGGLSREGKVDE 502

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              FF+   + G+ P+  T  S++ GL    Q       +  +++       + Y ILI 
Sbjct: 503 AIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIE 562

Query: 661 GLWKEGLTSQASYLLDLMLGKG 682
           GL  EG+  +A  LL+ +  KG
Sbjct: 563 GLAYEGMAKEALELLNELCNKG 584



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 183/383 (47%), Gaps = 16/383 (4%)

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
           L++    LE+M+  G  P       ++RG C +GK  ++   LE   G    P    +N 
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++   C AG+   A  +L++M+     D  ++N  +R LC++ ++++A E+L RM+    
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS--PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD  TY+  +   C+      A+++  ++  +    D ++Y+ LV G+C+  ++ EA++
Sbjct: 236 YPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
               M  +GC  +  + NI++  +C   +   A +L +     G S +  T+  ++  L 
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 559 K---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           +   L RA D   +L +M   GC  +  +Y  L+    ++ K+     +   MV  G  P
Sbjct: 356 RKGLLGRAID---ILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSD--SEVLDSSMYNILINGLWKEGLTSQASY 673
           D  T  ++L  L    ++      +N+L S   S VL +  YN +I+GL K G T +A  
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT--YNTVIDGLAKAGKTGKAIK 470

Query: 674 LLDLMLGKGWVPDATTHGLLVGS 696
           LLD M  K   PD  T+  LVG 
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGG 493



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 209/456 (45%), Gaps = 8/456 (1%)

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           ++ L+    +++    L  M   G   ++   T +I   CR  K  +A ++ +++     
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV- 362
           +PD +TY  +I+  C+   +++A  +L+ M V   +P    +  I+R LC+ GK  +++ 
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225

Query: 363 ---NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
                L+  C      +  L+E  C       A  +L++M DR    D  ++N+ +  +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +   + +A + L  M  S   P+  T++  +   C    + DA ++   +  +      +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +++ L+  LC+   +  A+++   M K+GC  +S S+N L++G C  +K+D+AI      
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S G      TY  ++  L K  + +D + +L Q+  +GC+  +  Y  +I  +++  K 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                  + M    L PD  T  SL+ GL+   ++       ++        ++  +N +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + GL K   T +A   L  M+ +G  P  T++ +L+
Sbjct: 526 MLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 16/318 (5%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  +R L    E+ + ++ L  MV    VPD    +  + G C++     A ++   +  
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
              V D I+Y+ ++ G C+  +I  A+ V   MS    S    ++N ++  LC   K+ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ +              TYT ++    +       + +L +M   GC  DV  Y +L+ 
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL----HLVSSGINKLVSD 646
            + ++ +L +   F N M  +G  P+  T   +L  +    +      L++  + K  S 
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEE 701
           S V     +NILIN L ++GL  +A  +L+ M   G  P++ +     HG      +   
Sbjct: 343 SVV----TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRA 398

Query: 702 IDSRRFAFDSSSFPDSVS 719
           I+          +PD V+
Sbjct: 399 IEYLERMVSRGCYPDIVT 416



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 1/202 (0%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A+  L  M S G    +  +N +L A+ ++ +   D V +  ++   
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK-VEDAVEILNQLSSK 443

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P + T N +++ L +  +   A+     M  K   P++ T+  ++ GL    +VD++
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +    E   +G++     +  I+  LC+  + + AI     M      P E +Y  LI  
Sbjct: 504 IKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG 563

Query: 317 LCENLRLDDANDILEDMIVIGL 338
           L       +A ++L ++   GL
Sbjct: 564 LAYEGMAKEALELLNELCNKGL 585


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 229/517 (44%), Gaps = 40/517 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +++K G  P+    N LL  L    R+  AL+   RM + G  P   T   ++ GL  N 
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +V D+V ++  M + G Q     Y  ++ ++C+  +   A+ L + M   ++  D + Y 
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+ LC++  LD+A ++  +M + G       +  ++ G C  G++D+    L D    
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
             SP+    + L++     GK   A  +L++M  R IA +  ++N  I   C+   + +A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +++  M+     PD  T++  + G CK    +D L +FR++S + ++ ++++Y+ LV+G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            CQ  K+  A ++F  M          S+ IL+ GLC   +++KA+ +      S     
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y  I+ G+    +  D   +   + ++G  LD  AY I+I  +  ++ L    + F 
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M + G  PD  T                                   YNILI     + 
Sbjct: 568 KMTEEGHAPDELT-----------------------------------YNILIRAHLGDD 592

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
             + A+ L++ M   G+  D +T  +++      E+D
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD 629



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/550 (23%), Positives = 252/550 (45%), Gaps = 17/550 (3%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V ++++M+++  +P V   N L   + +T + E  L   ++M  KG   +  T  I+I
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  ++  + S +G++  LG + +   +  ++  LC E ++ EA+ L   M  +   
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P  +T   L+N LC N ++ DA  +++ M+  G  P +  +  ++  +C+ G+   ++  
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250

Query: 365 L----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L    E         ++ +++  C  G    A  +  +M  +   AD  ++N  I   C 
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
                   +LL  M+   + P+  T+S  +    K     +A ++ +++  + +  ++I+
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G C+  ++ EA+++   M   GC     +FNILI G C   ++D  + L     
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430

Query: 540 SSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
             G    T TY  ++ G     KL+ AK L     +M+      D+ +Y IL+  + +  
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKL---FQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +L+     F  + K+ +  D    + ++HG+ + S++         L      LD+  YN
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA-----FDS 711
           I+I+ L ++   S+A  L   M  +G  PD  T+ +L+ + +G++ D+   A       S
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD-DATTAAELIEEMKS 606

Query: 712 SSFPDSVSDI 721
           S FP  VS +
Sbjct: 607 SGFPADVSTV 616



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 181/437 (41%), Gaps = 25/437 (5%)

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF--- 364
           L+Y + ++     ++ DDA D+  DMI     PT   F  +   + +  +++  +     
Sbjct: 54  LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113

Query: 365 LEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           +E K G   S +  + ++ C C   K   A   + K+       D   +N  +  LC   
Sbjct: 114 MESK-GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + +A EL+ RMV     P   T +  V G C      DA+ +  ++       + ++Y 
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  +C+  +   A+E+   M +    L +  ++I+I GLC    +D A  L +     
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      TY  ++ G     R  D   +L  M+    + +V  + +LI S  ++ KL++ 
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                 M++ G+ P+  T  SL+ G    ++L      ++ ++S     D   +NILING
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLL-----------VGSSVGEEIDSRRFAFD 710
             K         L   M  +G + +  T+  L           V   + +E+ SRR    
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR-- 470

Query: 711 SSSFPDSVS-DILAEGL 726
               PD VS  IL +GL
Sbjct: 471 ----PDIVSYKILLDGL 483



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 37/309 (11%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           I+++      T+  +I      G + E + L + M++           SL+  F    R+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
             A++++  M S G    +  FN+++    +  R   D + +++EM   G++ N  T N 
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANR-IDDGLELFREMSLRGVIANTVTYNT 443

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM---- 263
           L++   ++ ++E A   F+ M  +   P+  +++I++ GL  N  ++ ++ I G++    
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503

Query: 264 ------------------------FDL-------GIQLELSFYTCIIPMLCRENKLEEAI 292
                                   +DL       G++L+   Y  +I  LCR++ L +A 
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            LF+ M      PDELTY  LI     +     A +++E+M   G  P D   V +V  +
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINM 622

Query: 353 CEVGKFDES 361
              G+ D+S
Sbjct: 623 LSSGELDKS 631


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 231/526 (43%), Gaps = 19/526 (3%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R   D V  +  MV+    P     + LL  +       +A+  F ++  KG  P+  TF
Sbjct: 34  RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I+I      S    + S+L  +   G Q  L  +  II   C    + +A+   + + A
Sbjct: 94  TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
              + D+ TY  LIN L +N ++  A  +L++M    + P   ++  ++ GLC+ G    
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG---- 209

Query: 361 SVNFLEDKCGYVTS-----------PHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
              F+ D  G  +             +N+L++ CC+ G++     +L KM    +   D 
Sbjct: 210 ---FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++NI I  LC+   I +A  +L  M      PD  TY+A + G C   N  +A  +F ++
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + L  D ++Y+ L++G C+ + + EA+ +F  +       + +S+N LI GLC   ++
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
               +L    + S       TY  ++  L K  R  + L VL  M+ +G   ++  Y  +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           +     +N +      FN MVK+GL PD      L++G      +        ++   + 
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + D + YN LI+GL   G       LLD M   G  PD  T+ +L+
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/543 (23%), Positives = 238/543 (43%), Gaps = 12/543 (2%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           VF+ +LGAIV     +   + ++ ++   GI P++ T   L+   F  +    A      
Sbjct: 57  VFDKLLGAIVRMGH-YPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + K G  PN  TF  +I G   N  +  ++     +   G   +   Y  +I  L +  +
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A+ L + M    + P+ + Y  LI+ LC++  + DA  +   +   G+      +  
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR- 402
           ++ G C VG++ E    L         P     N L++  C  G+   A+ +L  M+ R 
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  D  ++N  +   C  E + +A EL  RMV   + PD   Y+  + G CK    ++A+
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F+++  ++LV    SY+ L++GLC   +I+   ++   M  +       ++NILI  L
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCA 579
           C   ++ +A+ +  +    G      TY  +M G      +  AKD   +  +M+  G  
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD---IFNRMVKSGLE 472

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            D+  Y +LI    +   + +  + F  M    L+PD  +  SL+ GL +  ++  V   
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           ++++    +  D   YNIL++   K     +A  L   ++   W    T H ++     G
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKG 592

Query: 700 EEI 702
           E++
Sbjct: 593 EKL 595



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 149/628 (23%), Positives = 263/628 (41%), Gaps = 48/628 (7%)

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           NV++       MV+   P        L+ + V       A+ +   + S G   S+  F 
Sbjct: 35  NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94

Query: 171 VVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           +++     +      F F +   ++K+G  PN+ T N ++        I  ALD  + + 
Sbjct: 95  ILINCYFHQSH--TAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
            +G   +  T+  +I GL  N ++  ++ +L EM    +Q  L  Y+ +I  LC++  + 
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVS 212

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A+ L   +    ++ D +TY  LI+  C   R  +   +L  M+   + P D  F  ++
Sbjct: 213 DALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILI 272

Query: 350 RGLCEVGKFDESVNFLE------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR- 402
             LC+ G+  E+   L       +K   VT  +NAL+E  C+      A+ +  +M  R 
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGEKPDIVT--YNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 403 ------------------KIAD---------CD--------SWNIPIRWLCENEEIRKAY 427
                             K+ D         C+        S+N  I  LC +  I    
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +LL  M  S+  PD  TY+  +   CK     +AL V   +  + +  + ++Y+ +++G 
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C    +  A ++F  M K+G      ++N+LI G C    VD+AI L             
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
           ++Y  ++ GL  L R   +  +L +M   G + DV  Y IL+ +  +          F  
Sbjct: 511 ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +V+ G+ PD  T  +++  L  G +L +    +  L+      +   Y ILIN L K+G 
Sbjct: 571 IVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVG 695
             +A  LL  M      PDA T  +++G
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIG 657



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/603 (21%), Positives = 258/603 (42%), Gaps = 44/603 (7%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           ++  +Q    T+  +I    + G + +    CQN++ + Y   +    +L+     + ++
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLN 206
             A+ +L  M     + ++ +++ ++  +   K GF +D + +  ++ + GI+ +  T N
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLC--KDGFVSDALGLCSQIGERGILLDAVTYN 234

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++      R +       +M ++   P+  TF I+I  L    R+ ++  +L  M   
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G + ++  Y  ++   C    + EA  LF  M    L PD L Y  LI+  C+   +D+A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             + +++    L PT   +  ++ GLC  G+       L++  G    P    +N L++ 
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+   A  +L  M  + +  +  ++N  +   C    +  A ++  RMV S + PD
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              Y+  + G CK    ++A+ +F+++  ++L+ D  SY+ L++GLC + +I    E+  
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M  +G S    ++NIL+   C  +  DKAI L                           
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISL--------------------------- 567

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
                     + +VEG   D      ++ ++ +  KLK        ++  G  P+ +T  
Sbjct: 568 ---------FRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            L++ L            ++K+  +    D+  + I+I  L +   T +A  L + M+ +
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678

Query: 682 GWV 684
           G V
Sbjct: 679 GLV 681



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 44/230 (19%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+    N  R+     +L  M   G    V  +N++L A  + +  F   + +++++V+
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP-FDKAISLFRQIVE 573

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            GI P+  T + +++ L +  +++ A D  + +   GC PN +T+ I+I           
Sbjct: 574 -GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINA--------- 623

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
                                     LC++    EA+ L   M   D  PD +T+E +I 
Sbjct: 624 --------------------------LCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657

Query: 316 CLCENLRLDDANDILEDMIVIG-------LTPTDDVFVDIVRGLCEVGKF 358
            L +    D A  + E+MI  G       L  + +VF     G   V +F
Sbjct: 658 VLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNVFFPASSGFQSVTEF 707


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 227/484 (46%), Gaps = 7/484 (1%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIA--NSRVDDSVSILGEMFDLGIQLELSFY 275
           + + +  F RM +    P+   F  ++  ++   N+    ++S+  ++   GI   +  +
Sbjct: 38  VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTF 97

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             ++   C   ++  A  +F  +  L   P  +T+  LIN +C N +L +A    + +I 
Sbjct: 98  NILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA 157

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
           +G       +  ++ GLC++G+   ++  L+   G + +     +N ++   C       
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  +M  ++I+ D  ++N  I   C   ++++A+ L   MV+ ++ PD  T+S  V 
Sbjct: 218 AYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK  N   A  +   +  Q ++ D ++YS L++G C V ++ +A  VF  MS+ G + 
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
            + S+NI+I GL  ++ VD+A+ L       G +  T TY  ++ GL KL R      ++
Sbjct: 338 HAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLV 397

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G   D+  Y  LI  + + + +         +   G+ P   T   L+ GL  G
Sbjct: 398 DEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKG 457

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L         L+     +++  YNI+INGL KEGL ++A  LL  M   G +PDA T+
Sbjct: 458 GRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTY 517

Query: 691 GLLV 694
             ++
Sbjct: 518 ETII 521



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 237/524 (45%), Gaps = 18/524 (3%)

Query: 122 MVKERY---------PNVREALISLVFSFV---NHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           M+K R+         P  R +    +  F+   N + VN  +     M       S+  F
Sbjct: 1   MLKNRFIYYSNNFLIPPFRASFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEF 60

Query: 170 NVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           N +LG+IV+     +   + +  ++   GI P + T N L+        +  A   F ++
Sbjct: 61  NKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKI 120

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P + TF  +I G+  N ++ +++     +  LG  L+   Y  +I  LC+  + 
Sbjct: 121 LKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGET 180

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A+++ K +    +  D + Y  +IN LC++  + DA  +  +MI   ++P    F  +
Sbjct: 181 RAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSL 240

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK- 403
           + G C VG+  E+     +      +P     + L++  C  G    AK +L  M  +  
Sbjct: 241 ILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGV 300

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           I D  +++  +   C   E+ KA  +   M    V P   +Y+  + G  K+   ++AL 
Sbjct: 301 IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALS 360

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F+++  + +  D+++Y+ L++GLC++ +I+ A ++   M  NG      ++N LI  LC
Sbjct: 361 LFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLC 420

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               +DKAI L       G   +  TY  ++ GL K  R K+   V   +L++G +++  
Sbjct: 421 KNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAW 480

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            Y I+I  + ++    +  +  + M   G++PD  T  +++  L
Sbjct: 481 TYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 161/355 (45%), Gaps = 37/355 (10%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYR 146
           I KR      T+  +IL   + G ++E  GL   MV K   P+V    I LV +      
Sbjct: 226 ITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSI-LVDALCKDGN 284

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +  A  +L  M   G    V  ++ ++ G  +  +   A  VF    M + G+ P+  + 
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF--STMSRLGVAPHAHSY 342

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N ++  L +   ++ AL  F+ M  KG  P++ T+  +I GL    R+  +  ++ EM +
Sbjct: 343 NIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHN 402

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI  ++  Y  +I +LC+ + +++AI L K ++   + P   TY  LI+ LC+  RL +
Sbjct: 403 NGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKN 462

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A D+ +D+++ G +     +  ++ GLC+ G F+E                         
Sbjct: 463 AQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNE------------------------- 497

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                 A+ +L KM +   I D  ++   IR L   +E  KA +LL  M++  ++
Sbjct: 498 ------AEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 216/446 (48%), Gaps = 6/446 (1%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           K++   GI  N+ TLN ++       +   A     ++ K G  P++ TF  +IKGL   
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +V ++V ++  M + G Q ++  Y  I+  +CR      A+ L + M   ++  D  TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +I+ LC +  +D A  + ++M   G+  +   +  +VRGLC+ GK+++    L+D   
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 371 YVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P+    N LL+     GK   A  + ++M  R I+ +  ++N  +   C    + +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +L  MV +   PD  T+++ + G C +   +D ++VFR +S + LV ++++YS LV+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G CQ  KI  A E+F  M  +G      ++ IL+ GLC   K++KA+ +      S    
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               YT I+ G+ K  + +D   +   +  +G   +V  Y ++I  + ++  L +  +  
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531

Query: 606 NVMVKAGLVPDRETMLSLLHG-LADG 630
             M + G  P+  T  +L+   L DG
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDG 557



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 195/400 (48%), Gaps = 8/400 (2%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++     FN ++  +  E +  ++ V +   MV+ G  P+V T N ++  +  +     
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGK-VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           ALD  R+M ++    +  T+  +I  L  +  +D ++S+  EM   GI+  +  Y  ++ 
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+  K  +   L K M + +++P+ +T+  L++   +  +L +AN++ ++MI  G++P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ G C   +  E+ N L+    +KC        +L++  C   +      + 
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 397 EKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             ++ R  +A+  +++I ++  C++ +I+ A EL   MV   V+PD  TY   + G C  
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E AL +F  +    + L  + Y+ ++EG+C+  K+ +A  +FC +   G   +  ++
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511

Query: 516 NILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIM 554
            ++I GLC    + +A I LR +    G +    TY  ++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKME-EDGNAPNDCTYNTLI 550



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/517 (21%), Positives = 235/517 (45%), Gaps = 9/517 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + +++EM+++  +P++   +     +  T +    LD  +++   G   N  T  I+I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +   + S+LG++  LG + + + +  +I  L  E K+ EA+ L   M      
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +TY  ++N +C +     A D+L  M    +      +  I+  LC  G  D +++ 
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 365 LED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
            ++      K   VT  +N+L+   C AGK+     +L+ M  R+I  +  ++N+ +   
Sbjct: 251 FKEMETKGIKSSVVT--YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  ++++A EL   M+   + P+  TY+  + G C      +A  +   +       D 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++++ L++G C V+++ + ++VF  +SK G   ++ +++IL+ G C   K+  A  L   
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S G      TY  ++ GL    + +  L +   +      L +  Y  +I+ M +  K
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++D    F  +   G+ P+  T   ++ GL     L   +  + K+  D    +   YN 
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           LI    ++G  + ++ L++ M   G+  DA++  +++
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 218/519 (42%), Gaps = 22/519 (4%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESAL------------DQFRRMHKKGCCPNSRTF 240
           M+K  I  N+  L  +   L +T  + + L              F  +     C   R  
Sbjct: 2   MIKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRER-- 59

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
              ++  I + + DD++++  EM        L  ++     + R  +    +   K +  
Sbjct: 60  ---LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL 116

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             +  +  T   +INC C   +   A  +L  ++ +G  P    F  +++GL   GK  E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176

Query: 361 SV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
           +V      +E+ C      +N+++   C +G   LA  +L KM +R + AD  +++  I 
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC +  I  A  L   M    +     TY++ V G CK   + D   + + + ++ +V 
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           + I+++ L++   +  K+ EA E++  M   G S +  ++N L+ G C+  ++ +A  + 
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            L   +  S    T+T ++ G   ++R  D + V   +   G   +   Y IL+Q   + 
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+K     F  MV  G++PD  T   LL GL D  +L         L      L   MY
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +I G+ K G    A  L   +  KG  P+  T+ +++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 97/275 (35%), Gaps = 35/275 (12%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L   M+ S  +P    +S F     +   +   L   +Q+    +  +  + + ++ 
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  K   A  V   + K G    +++FN LI GL +  KV +A+ L      +G   
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  I+ G+ +       L +L +M       DV  Y  +I S+     +      F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M   G+     T                                   YN L+ GL K 
Sbjct: 252 KEMETKGIKSSVVT-----------------------------------YNSLVRGLCKA 276

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           G  +  + LL  M+ +  VP+  T  +L+   V E
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 242/516 (46%), Gaps = 18/516 (3%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
            N +L  + +  R     + ++ +M + G V N  T   L+  L +   ++ A+     M
Sbjct: 49  LNTILAELCD-ARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDM 106

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             +G  P +    +VI GL    R+  ++ +  +M D      L+ YT ++  L +  +L
Sbjct: 107 KSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLT-YTKLVHGLSKAGRL 165

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A+++ + M +   +PD  T   ++  LC   R+DDA +++E+M+  G+      +  +
Sbjct: 166 RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVT----SP----HNALLECCCNAGKFFLAKCILEKMA 400
           V GLC+  + DE+V  L    G VT    +P    ++ +++  C AG+   A  I E+M+
Sbjct: 226 VDGLCKCERLDEAVALL---LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 282

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
               A   ++N  I   C   ++ +A  LLG+MV  +  PD  TY+  +   CK+   +D
Sbjct: 283 CAPTAI--TYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDD 340

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +F+Q+ A  L  D ++++ LV+GLC   ++ +A+E+   +++ GC  +  ++N ++ 
Sbjct: 341 AYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVD 400

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG--C 578
           G C   +V KA  L +   S G    T TY  ++ G  +  R    L  L Q+  EG  C
Sbjct: 401 GYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC 460

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
              V  Y I++ ++    +  D   F+  M++ G VP   T  +++  L    Q      
Sbjct: 461 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHE 520

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            + +++           + +++   + G+  +A  L
Sbjct: 521 LLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 215/461 (46%), Gaps = 10/461 (2%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDD-SVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           M   G   +S TF +V++GL A++++      +L E+ D G+  +      I+  LC   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
               A+ LF  M  L  + +  TY  LI+ LC+   LD+A  +L DM   G+ P   +  
Sbjct: 61  DTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 347 DIVRGLCEVGKFDESVNF---LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADR 402
            ++ GLC  G+   ++     + D        +  L+     AG+   A  +L++M + R
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + D  +  + ++ LC  + +  A EL+  M+   +  +  TYSA V G CK    ++A+
Sbjct: 180 HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 239

Query: 463 RVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
            +   +V+ +    D ++YS +++GLC+  ++ +AV++F  MS   C+ ++ ++N LI G
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGG 296

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            C    +D+AIRL         +    TYT +M    K+ R  D   +  QM+    + D
Sbjct: 297 YCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 356

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           V  +  L+  +  + +++D       + + G  P   T   ++ G    +Q+      + 
Sbjct: 357 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVA 416

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
              S   V ++  YNIL+ G  + G T QA   LD +  +G
Sbjct: 417 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 130/572 (22%), Positives = 243/572 (42%), Gaps = 52/572 (9%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G+      F VVL  +    +       +  E+   G+ P+   LN +L  L +  
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
              +A+  F +M + G   N  T+  +I  L     +D+++ +L +M   G+      + 
Sbjct: 61  DTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LCR  +L  A+ +++ M      PD LTY +L++ L +  RL DA  +L++M+  
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
              P +     +V+ LC   + D+                               A+ ++
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDD-------------------------------ARELV 207

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL-GRMVVSSVVPDCATYSAFVLGKCK 454
           E+M  R +A +  +++  +  LC+ E + +A  LL G +      PD  TYS  + G CK
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                DA+ +F ++S       +I+Y+ L+ G C+   + EA+ +   M  + C+    +
Sbjct: 268 AGRLRDAVDIFEEMSCAPT---AITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  L+   C M ++D A  L     ++  S    T+T ++ GL    R +D L +L ++ 
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             GC   +  Y  ++    + N+++            G VP+  T   L+ G     +  
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 635 LVSSGINKLVSDSEVLDSS--MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                +++L S+     +S  MY I+++ L ++G T  A    + M+ +G+VP A T   
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 504

Query: 693 LVGSSVGEEIDSRRFAFDSSSFPDSVSDILAE 724
           +V            FA   +  P    ++L E
Sbjct: 505 VV------------FALCKAHQPQQAHELLEE 524



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 227/489 (46%), Gaps = 22/489 (4%)

Query: 60  NLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
            LSPD      ++  L +  D ++A+ +F  ++      HT  TY  +I  L  A  ++E
Sbjct: 41  GLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHT--TYYNLIHPLCKARLLDE 98

Query: 115 MEGLCQNMVKERYPNVREALISLVFS-FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
             GL  +M K R  N    L ++V        R+  A+ V   MN       +    +V 
Sbjct: 99  AMGLLLDM-KSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVH 157

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G  + +     D V V +EMV A  VP+  TL  +++ L   +R++ A +    M  +G 
Sbjct: 158 G--LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVS-ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             N+ T+  ++ GL    R+D++V+ +LGE+   G   ++  Y+ +I  LC+  +L +A+
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            +F+ M      P  +TY  LI   C    +D+A  +L  M+     P    +  ++   
Sbjct: 276 DIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAF 332

Query: 353 CEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADC- 407
           C++G+ D++    +       SP      +L++  C  G+   A  +LE++  R      
Sbjct: 333 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 392

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N  +   C++ ++RKA EL+        VP+  TY+  V G C+    + AL+   Q
Sbjct: 393 YTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 452

Query: 468 VSAQSLVLDS--ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           ++++     +    Y+ +++ LC+  +  +AV+ +  M + G   ++++F  +++ LC  
Sbjct: 453 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKA 512

Query: 526 RKVDKAIRL 534
            +  +A  L
Sbjct: 513 HQPQQAHEL 521



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 112/274 (40%), Gaps = 21/274 (7%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           D  IR+L    D + A  +  + ++   F       CKM       G +++   L Q MV
Sbjct: 304 DEAIRLLGKMVDDNCAPDVITYTTLMSAF-------CKM-------GRLDDAYELFQQMV 349

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE--EKR 181
             +         SLV       R+  A+ +L  +   G   ++  +N V+    +  + R
Sbjct: 350 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVR 409

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG-CCPNS-RT 239
              + V  ++     G VPN  T N L+       R + AL    +++ +G  CP S   
Sbjct: 410 KAEELVADFRSR---GFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAM 466

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           + I++  L  + R DD+V    EM   G     + +  ++  LC+ ++ ++A  L + M 
Sbjct: 467 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMI 526

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
                P   T + +++  C    +  A+++  ++
Sbjct: 527 KYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 152/648 (23%), Positives = 261/648 (40%), Gaps = 79/648 (12%)

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           +F+     Y  +I  L   G  + M  L   M +  Y      L +L+  F    RV+ A
Sbjct: 56  KFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAA 115

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + +L  M S  F   + ++NV +      K G  D  +  + EM   G+VP+  T   ++
Sbjct: 116 LSLLDEMKSNTFDADIVLYNVCIDCF--GKVGKVDMAWKFFHEMKANGLVPDDVTYTSMM 173

Query: 210 EVLFETNRIESALDQFRRMHK-----------------------------------KGCC 234
            VL + NR++ A++ F +M +                                   KGC 
Sbjct: 174 GVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCI 233

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+   +  ++  L    + D ++ I  EM    +   L  Y  II MLC+   +E A ++
Sbjct: 234 PSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKV 292

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M+   L P+  T   +I+ LC+  +LD+A  I E M     +P    F  ++ GL +
Sbjct: 293 RDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGK 352

Query: 355 VGKFDESVNFLED---------------------KCGYVTSPH----------------- 376
            G+ D++    E                      KC      H                 
Sbjct: 353 QGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLML 412

Query: 377 -NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N  ++C   AG+    + + E++  R  + D  S++I I  L +    R+ YEL   M 
Sbjct: 413 LNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMK 472

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
               V D   Y+  + G CK      A ++  ++         ++Y  +V+GL +++++ 
Sbjct: 473 DQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLD 532

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA  +F     NG  L+   ++ LI G   + +VD+A  +       G +    T+  ++
Sbjct: 533 EAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLL 592

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GLVK +   + LV    M    C  +   YCILI  + +  K     +F+  M K GL 
Sbjct: 593 DGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLK 652

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
           P+  T  +++ GLA    +   SS   +  +   + DS+ YN +I GL
Sbjct: 653 PNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL 700



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 138/581 (23%), Positives = 256/581 (44%), Gaps = 17/581 (2%)

Query: 59  HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + L PD      ++ VL   N L  A++IF+ +  Q R    A  Y  MI+  G AG  +
Sbjct: 160 NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME-QNRQVPCAYAYNTMIMGYGSAGKFD 218

Query: 114 EMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           E   L +    K   P+V  A   ++       + + A+R+   M       ++  +N++
Sbjct: 219 EAYSLLERQRAKGCIPSVV-AYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNII 276

Query: 173 LGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           +G +   K G  +  F  ++ +K AG+ PNV T+N +++ L +  +++ A   F  M  K
Sbjct: 277 IGMLC--KAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK 334

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
            C P+  TF  +I GL    RVDD+  I   M D      +  YT +I    + ++ E+ 
Sbjct: 335 VCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDG 394

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
            +++K M      PD +     ++C+ +    +    + E++   G  P    +  ++  
Sbjct: 395 HKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHS 454

Query: 352 LCEVGKFDESVNF---LEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIAD 406
           L + G   E+      ++D+ C   T  +N +++  C +GK   A  +LE+M        
Sbjct: 455 LVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPT 514

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++   +  L + + + +AY L      + +  +   YS+ + G  K+   ++A  V  
Sbjct: 515 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVME 574

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++  + L  +  +++ L++GL + E+I EA+  F  M    C+ +  ++ ILI GLC +R
Sbjct: 575 EMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K +KA          G    T TYT ++ GL K         +  +    G   D  +Y 
Sbjct: 635 KFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYN 694

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +I+ +S  N+  D    F      G     +T ++LL  L
Sbjct: 695 AMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL 735



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 229/554 (41%), Gaps = 44/554 (7%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P       L+  L E    +  L  F +M + G   N      +I+      RVD ++S+
Sbjct: 59  PAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSL 118

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM       ++  Y   I    +  K++ A + F  M+A  L+PD++TY  ++  LC+
Sbjct: 119 LDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCK 178

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK----CGYVTSP 375
             RLD+A +I E M      P    +  ++ G    GKFDE+ + LE +    C      
Sbjct: 179 ANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVA 238

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           +N +L C    GK   A  I E+M    + +  ++NI I  LC+   +  A+++   M  
Sbjct: 239 YNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKE 298

Query: 436 SSVVP-----------------------------------DCATYSAFVLGKCKLCNYED 460
           + + P                                   D AT+ + + G  K    +D
Sbjct: 299 AGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDD 358

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A R++ ++     + + + Y+ L+    + ++  +  +++  M ++GCS      N   Y
Sbjct: 359 AYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNT--Y 416

Query: 521 GLCVMR--KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
             CV +  + +K   L     + G    T +Y+ ++  LVK   A++   +   M  +GC
Sbjct: 417 MDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGC 476

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
            LD  AY  +I    +  K+         M   G  P   T  S++ GLA   +L     
Sbjct: 477 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYM 536

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSS 697
              +  S+   L+  +Y+ LI+G  K G   +A  +++ M+ KG  P+  T   LL G  
Sbjct: 537 LFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLV 596

Query: 698 VGEEIDSRRFAFDS 711
             EEI+     F S
Sbjct: 597 KAEEINEALVCFQS 610



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 223/527 (42%), Gaps = 22/527 (4%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R F     +  EM  AG  P   T   L+    ++ ++  A D  + M      P    +
Sbjct: 5   RNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAY 64

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I  L      D  +++  +M +LG ++ +   T +I +  RE +++ A+ L   M++
Sbjct: 65  TTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKS 124

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
                D + Y   I+C  +  ++D A     +M   GL P D  +  ++  LC+  + DE
Sbjct: 125 NTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDE 184

Query: 361 SVNFLED-------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNI 412
           +V   E         C Y    +N ++    +AGKF  A  +LE+   +  I    ++N 
Sbjct: 185 AVEIFEQMEQNRQVPCAYA---YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            +  L +  +  KA  +   M     +P+  TY+  +   CK  N E A +V   +    
Sbjct: 242 ILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  +  + + +++ LC+ +K+ EA  +F  M    CS   ++F  LI GL    +VD A 
Sbjct: 301 LFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAY 360

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD---VEAY--CI 587
           R+      +        YT ++    K  R +D   +  +M+  GC+ D   +  Y  C+
Sbjct: 361 RIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCV 420

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
                +E+ +    ALF  +  + G +PD  +   L+H L               +    
Sbjct: 421 FKAGETEKGR----ALFEEIKAR-GFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            VLD+  YN +I+G  K G  ++A  LL+ M   G  P   T+G +V
Sbjct: 476 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVV 522



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 167/374 (44%), Gaps = 32/374 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +YKEM+++G  P++  LN  ++ +F+    E     F  +  +G  P++R++ I+I  L+
Sbjct: 397 MYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLV 456

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                 ++  +   M D G  L+   Y  +I   C+  K+ +A +L + M+ +   P  +
Sbjct: 457 KAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVV 516

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +++ L +  RLD+A  + E+    G+     ++  ++ G  +VG+ DE        
Sbjct: 517 TYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDE-------- 568

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAY 427
                                  A  ++E+M  + +  +  +WN  +  L + EEI +A 
Sbjct: 569 -----------------------AYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEAL 605

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
                M      P+  TY   + G CK+  +  A   ++++  Q L  ++I+Y+ ++ GL
Sbjct: 606 VCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGL 665

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            +   + +A  +F     +G    S+S+N +I GL +  +   A +L       G S  T
Sbjct: 666 AKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHT 725

Query: 548 STYTKIMLGLVKLQ 561
            T   ++  L K +
Sbjct: 726 KTCVALLDALHKAE 739



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 3/202 (1%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  +I   G  G V+E   + + M+++   PNV      L+   V    +N A+    +M
Sbjct: 553 YSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVY-TWNCLLDGLVKAEEINEALVCFQSM 611

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                  +   + +++  + + ++    FVF ++EM K G+ PN  T   ++  L ++  
Sbjct: 612 KDLKCTPNQITYCILINGLCKVRKFNKAFVF-WQEMQKQGLKPNTITYTAMISGLAKSGN 670

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +  A   F R    G  P+S ++  +I+GL   +R  D+  +  E    G  +       
Sbjct: 671 VAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVA 730

Query: 278 IIPMLCRENKLEEAIRLFKMMR 299
           ++  L +   LE+A  +  ++R
Sbjct: 731 LLDALHKAECLEQAAIVGAVLR 752


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 256/594 (43%), Gaps = 38/594 (6%)

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS--G 160
           + +L  AG+++ ++   Q M          AL++ + +F      + A++         G
Sbjct: 62  VRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLG 121

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
               +V V+N +L A++ E    A  V VY  M KAG+ PNV T N L++ L + +R+ +
Sbjct: 122 CAAPTVRVYNHLLDALLRENL-VAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGA 180

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A      M +KGC P+  +   +I  L    R+D++  IL EM  +G     + Y  ++ 
Sbjct: 181 ARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG-----ASYNAVVH 235

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC + ++ E   +   M    L PD + Y  ++   C+   L  A  IL  M+  G  P
Sbjct: 236 ALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVP 295

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
               F  +V+G  + GK  +++                                + E  A
Sbjct: 296 NVQTFTVLVKGFFDDGKVHDALGMWN--------------------------WMVAEGWA 329

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
              I    S+N+ IR LC   ++++A  +   M  S  +PD  TYS  + G  K  + + 
Sbjct: 330 PSTI----SYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ ++  ++      + + Y+ +V+ LC+     +A  +   MS   C  ++ +FN LI 
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIR 445

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC + +  +A+ +       G      TY +++ GL +    +D L +L +ML  G  L
Sbjct: 446 SLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFEL 505

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            + +Y   I  + +   +K+  +    M+  G+ PD  T  +++H       +   +  +
Sbjct: 506 SLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWML 565

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++ + +   +   Y  L++GL  +     A   L  ML +G  P+  T  +LV
Sbjct: 566 GRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLV 619



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 180/417 (43%), Gaps = 46/417 (11%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++ A  +L  M   G       +N V+ A+  + R   +   V  EMV  G+ P+    
Sbjct: 212 RLDEARGILAEMTPVGAS-----YNAVVHALCGQFR-MREVFLVVDEMVHRGLRPDTVAY 265

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             ++    +   +  A     RM  +GC PN +TF +++KG   + +V D++ +   M  
Sbjct: 266 TSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVA 325

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G       Y  +I  LC    L+ A+ +F  M   D +PD  TY  LI+   +   LD 
Sbjct: 326 EGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLE 381
           A  I  DM   G  P   V+ ++V  LC+   FD++ N ++    + C   T   N L+ 
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIR 445

Query: 382 CCCNAGKFFLAKCILEKMA-------DR----------KIADCD---------------- 408
             C+ G+   A  +   M        DR          +  +C+                
Sbjct: 446 SLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFEL 505

Query: 409 ---SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
              S+N  I  LC+   I++A  LLGRM++  + PD  T++A +   CK  N   A  + 
Sbjct: 506 SLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWML 565

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            ++ A +   + ++Y+ L+ GLC   K+ +A+     M   G   + +++N+L+ G+
Sbjct: 566 GRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 5/288 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I+ LC+N+ +  A  +L  M      PD  +++  +   CKL   ++A  +  ++
Sbjct: 164 TYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM 223

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           +         SY+ +V  LC   ++ E   V   M   G    + ++  ++   C  R++
Sbjct: 224 TPVG-----ASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKAREL 278

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A  + +   + G      T+T ++ G     +  D L +   M+ EG A    +Y +L
Sbjct: 279 RMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVL 338

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I+ +     LK     F+ M K+  +PD  T  +L+ G +    L +  S  N + +   
Sbjct: 339 IRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGC 398

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             +  +Y  +++ L K+ +  QA  L+D M  +   P+  T   L+ S
Sbjct: 399 KPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRS 446


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 247/566 (43%), Gaps = 14/566 (2%)

Query: 146 RVNGAM-RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI--VPNV 202
           R + AM  V   M   G+   V  +N ++  +  EK+       +       G    PNV
Sbjct: 141 RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNV 200

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            + N +++  F+   ++ A   F  M  +G  P+  T+  +I GL     +D +V+IL  
Sbjct: 201 VSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQH 260

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           MFD G+  +   Y  +I   C   +LEEA+RL K M    L PD +TY  LI   C+  R
Sbjct: 261 MFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGR 320

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNA 378
             +A  + + M+  G  P   ++  ++ G    G   +  + L+    D   +     N 
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+      G    A     +M    +  D  S++  I  LC+   +  A     +MV   
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+  ++++ + G C +  ++    +  ++  + +  D+I  + +++ LC+  ++ EA 
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           + F  +   G      S+N LI G C + K+D++I+      S G    + TY  ++ G 
Sbjct: 501 DFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGY 560

Query: 558 VKLQRAKDLLVVLAQML---VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            K  R +D L +  +M    V+ CA+      I++  + +  ++      +  MV  G  
Sbjct: 561 FKNGRVEDALALYREMFRKDVKFCAITSN---IMLHGLFQAGRIVAARELYMKMVDRGTQ 617

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
              ET  ++L GL + S +         L S    LD   ++I+IN L K G   +A  L
Sbjct: 618 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSL 677

Query: 675 LDLMLGKGWVPDATTHGLLVGSSVGE 700
              M+ +G VPD  T+ L++ S + E
Sbjct: 678 FSAMVLRGPVPDVITYSLMIKSHIEE 703



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 132/576 (22%), Positives = 259/576 (44%), Gaps = 18/576 (3%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G V++   L   M+ +  P       SL+        ++ A+ +L +M   G       +
Sbjct: 214 GEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTY 273

Query: 170 NVVLGAIVEEKRGF------ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           N+++       RG+       + V + K+M  +G+ P+V T + L++   +  R   A  
Sbjct: 274 NIMI-------RGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARS 326

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F  M +KG  PNS  + I++ G      + D   +L  M   GI  E   +  +I    
Sbjct: 327 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 386

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +   +++A+  F  MR   L PD ++Y  +I+ LC+  R++DA      M+  GL+P   
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKM 399
            F  ++ GLC +G++ +      +       P     N +++  C  G+   A+   + +
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               +  D  S+N  I   C   ++ ++ + L RMV   + PD  TY++ + G  K    
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           EDAL ++R++  + +   +I+ + ++ GL Q  +I  A E++  M   G  L   ++N +
Sbjct: 567 EDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 626

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           + GLC    VD+A+R+     S        T++ ++  L+K+ R  +   + + M++ G 
Sbjct: 627 LGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGP 686

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y ++I+S  E+  L++    F  M K G   D   +  ++  L +   +    +
Sbjct: 687 VPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGT 746

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            + K+   +  L++S   +LI  + ++    +  +L
Sbjct: 747 YLTKIDEKNFSLEASTAALLIPIVSEKKYQKEVKFL 782



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 201/448 (44%), Gaps = 9/448 (2%)

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +VS+   M   G+ +  +    +I   C   +L+ A   F +          +T  +LI 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 316 CLCENLRLDDAND-ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---EDKCGY 371
            LC+  R DDA D +   M  +G TP    +  +++GLC   K  E++  L       GY
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
             SP    +N +++     G+   A  +  +M  + +  D  ++N  I  LC+ + + KA
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +L  M    V+PD  TY+  + G C L   E+A+R+ +++S   L  D ++YS L++ 
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++ +  EA  VF  M + G   +S+ ++IL++G      +     L  L    G  + 
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              +  ++    K       +    +M   G   DV +Y  +I  + +  +++D    FN
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            MV  GL P+  +  SL+HGL    +   V     ++++     D+   N +++ L KEG
Sbjct: 435 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 494

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +A    D+++  G  PD  ++  L+
Sbjct: 495 RVVEAQDFFDMVIHIGVKPDVVSYNTLI 522


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 156/661 (23%), Positives = 299/661 (45%), Gaps = 30/661 (4%)

Query: 61  LSPDHLIRVLDNT--NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGL 118
           L+P+ +  VL  +  +D       F W S +        +Y  + ++L  +G + + + +
Sbjct: 83  LNPEIVCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNM 142

Query: 119 CQNMVKERYPNVREALISLV-----FS---------FVNHYRV----NGAMRVLVNMNSG 160
            + +++ R P + E L SLV     F          F++ +RV    N A  V +   S 
Sbjct: 143 LEKLLQTRKPPL-EILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISE 201

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF  ++   N ++  +++       F  VY  MV+A IVP+V T   +++   +   +  
Sbjct: 202 GFFPTLICCNNLMRDLLKANM-MGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIK 260

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
                  M K+ C PN  T+   I GL     VD+++ +   M + G+  +   YT ++ 
Sbjct: 261 GKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVD 319

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C++ + +EA  +F+ M +  L P+  TY  LI+   +   +++A  I ++MI  GL  
Sbjct: 320 GFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKL 379

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  ++ G+ + G+  ++++   +       P    +N L++    +     A  +L
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELL 439

Query: 397 EKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  RK+     ++++ I  LC + +++KA E+L +M+ + V P+   Y   +    + 
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             YE A+ + + + A  ++ D   Y+ L+ GLC+ +K+ EA  +   M + G   ++ ++
Sbjct: 500 SRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
              I       ++  A R      SSG       YT ++ G   +    + L     ML 
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +G   D+ AY  +I S+S+  K K+    F   +K G+VPD     SL+ G      +  
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679

Query: 636 VSSGINKLVSDSEVLDSSMYNILIN--GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
            S   ++++ +    +  +YN LIN  G  K G  ++A  L D M+ KG  PD   + +L
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 739

Query: 694 V 694
           +
Sbjct: 740 I 740



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/636 (21%), Positives = 269/636 (42%), Gaps = 78/636 (12%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PN R    +L+  F+    +  A+R+   M + G KL+V  +N ++G I +     A  +
Sbjct: 344 PN-RFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE-MAKAM 401

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            ++ EM+ AGI P+  T N L++   +++ +  A +    M  +   P+  T+ ++I GL
Sbjct: 402 SLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
             +S +  +  +L +M   G++  +  Y  +I    +E++ E AI L K+M A  ++PD 
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521

Query: 308 LTYEELINCLCENLRLDDANDIL-----------------------------------ED 332
             Y  LI  LC   ++++A  +L                                   +D
Sbjct: 522 FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECCCNAGK 388
           M+  G+ P + ++  +++G C+VG   E+++     LE         ++A++      GK
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641

Query: 389 FFLAKCILEK-MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +  K +    + D   +N  I   C+  +I KA +L   M+ + + P+   Y+ 
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNT 701

Query: 448 FV--LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG------------------- 486
            +   G CK  N  +A ++F ++ ++ +  D   Y  L++G                   
Sbjct: 702 LINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 761

Query: 487 ---------------LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
                           C+  K+ EA E+F  M     + +  ++ ILI        +++A
Sbjct: 762 KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 821

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
            +L     +      T TYT ++L   ++     ++ +   M   G A D  AY ++  +
Sbjct: 822 EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASA 881

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             ++ K  +     N  +  G+  + +   +L+  L    Q+  V   ++++  +   L 
Sbjct: 882 YCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLS 941

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           S   N L+ G +K G   +AS +L +M   GWVP +
Sbjct: 942 SKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 977



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/506 (21%), Positives = 218/506 (43%), Gaps = 57/506 (11%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVY 190
           L+       +V  A  +LV+M   G K +   +   +      G I   +R F       
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF------- 579

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           K+M+ +GIVPN      L++   +      AL  F+ M +KG  P+ R +  +I  L  N
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +  +++ +  +    G+  ++  Y  +I   C+E  +E+A +L+  M    + P+ + Y
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699

Query: 311 EELIN--CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
             LIN    C++  L +A  + ++MI  G++P   ++  ++ G  + G  +++++     
Sbjct: 700 NTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA 759

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
           + K     S  N+L++  C  GK   A+ + + M D+K+  +  ++ I I    + E + 
Sbjct: 760 QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 819

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A +L   M   +++P+  TY++ +L   ++ N    + +F+ + A+ +  D+I+Y  + 
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA 879

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              C+  K  EA+++       G  L    F+ LI+ LC  +++   + L S       S
Sbjct: 880 SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELS 939

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
            ++ T   ++LG  K     +   VL                                  
Sbjct: 940 LSSKTCNTLLLGFYKSGNEDEASKVLG--------------------------------- 966

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADG 630
             VM + G VP   T LSL   ++ G
Sbjct: 967 --VMQRLGWVP---TSLSLTDSISTG 987



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 161/363 (44%), Gaps = 9/363 (2%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           +  +++  C  G     K +L +M      +  ++N  I  LC+   + +A E+   M+ 
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + PD  TY+  V G CK    ++A  +F  + +  L  +  +Y+ L++G  +   I E
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+ +   M   G  L+  ++N +I G+    ++ KA+ L +    +G    T TY  ++ 
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLID 424

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G +K         +LA+M           Y +LI  +   + L+      + M++ G+ P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +     +L+      S+  +    +  ++++  + D   YN LI GL +     +A  LL
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544

Query: 676 DLMLGKGWVPDATTHGLLVG--SSVGE-EIDSRRFA--FDSSSFPDSV-SDILAEG---L 726
             M  KG  P+A T+G  +   S  GE ++  R F     S   P++V   IL +G   +
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604

Query: 727 GNT 729
           GNT
Sbjct: 605 GNT 607


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 231/507 (45%), Gaps = 27/507 (5%)

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIV 199
           FV   R + A+ +   M      L++  FN+++    +  K  F+  +  + ++ K G  
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTKLGFQ 173

Query: 200 PNVDTLNYLLEVLFETNRIESALDQF---------------RRMHKKGCCPNSRTFEIVI 244
           P+V T N LL  L   +RI  AL  F                +M + G  P   TF  +I
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GL    RV ++ +++ +M   G+ +++  Y  I+  +C+    + A+ L   M    + 
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD + Y  +I+ LC++    DA  +  +M+  G+ P    +  ++ G C  G++ ++   
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L D      +P     NAL+      GK F A+ + ++M  R I  D  ++N  I   C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           +     A  +   M      PD  T++  +   C+    ++ +++ R++S + LV ++ +
Sbjct: 414 HNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ G C+V+ +  A ++F  M  +G    + + NIL+YG C   K+++A+ L  +  
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            S     T  Y  I+ G+ K  +  +   +   + + G   DV+ Y ++I     ++ + 
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHG 626
           D  + F+ M   G  PD  T  +L+ G
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRG 616



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/572 (21%), Positives = 244/572 (42%), Gaps = 59/572 (10%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME-GLCQ 120
           S  H  + LD+      A+  F ++   + F    D  C  ++ + +  N  ++   L +
Sbjct: 79  SGSHYFKSLDD------AIDFFDYMVRSRPFYTAVD--CNKVIGVFVRMNRPDVAISLYR 130

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M   R P    +   L+  F + ++++ ++     +   GF+  V  FN +L  +  E 
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 181 R--------------GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           R              GF + V ++ +MV+ G+ P V T N L+  L    R+  A     
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M  KG   +  T+  ++ G+        ++++L +M +  I+ ++  Y+ II  LC++ 
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT----- 341
              +A  LF  M    + P+  TY  +I+  C   R  DA  +L DMI   + P      
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 342 -------------------DD-----VFVD------IVRGLCEVGKFDESVNFLEDKCGY 371
                              D+     +F D      ++ G C+  +FD++ +  +     
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
                N +++  C A +      +L +++ R  +A+  ++N  I   CE + +  A +L 
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+   V PD  T +  + G C+    E+AL +F  +    + LD+++Y+ ++ G+C+ 
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+ EA ++FC +  +G      ++N++I G C    +  A  L      +G     STY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
             ++ G +K       + ++++M   G + D 
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 155/353 (43%), Gaps = 12/353 (3%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  +   M   G   +V  +N ++       R ++D   + ++M++  I P+V T N L+
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR-WSDAQRLLRDMIEREINPDVLTFNALI 373

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
               +  ++  A      M  +   P++ T+  +I G   ++R DD+      MFDL   
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMAS 429

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++  +  II + CR  +++E ++L + +    L+ +  TY  LI+  CE   L+ A D+
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCN 385
            ++MI  G+ P       ++ G CE  K +E++   E     K    T  +N ++   C 
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             K   A  +   +    +  D  ++N+ I   C    I  A  L  +M  +   PD +T
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV--EKITE 495
           Y+  + G  K    + ++ +  ++ +     D+ +     E +C+V  E+I E
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIE 662



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 22/252 (8%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ ++R++  + + L+  S++ L++  C   K++ ++  F  ++K G      +FN L++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC+  ++ +A+ L    Y   T +  +                  + +  QM+  G   
Sbjct: 185 GLCLEDRISEALAL--FGYMVETGFLEA------------------VALFDQMVEIGLTP 224

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            V  +  LI  +  + ++ + A   N MV  GL  D  T  ++++G+          + +
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
           +K+       D  +Y+ +I+ L K+G  S A YL   ML KG  P+  T+  ++    S 
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 699 GEEIDSRRFAFD 710
           G   D++R   D
Sbjct: 345 GRWSDAQRLLRD 356



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G    + +D AI        S   YT     K++   V++ R    + +  +M +    L
Sbjct: 80  GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL------- 633
           ++ ++ ILI+   + +KL      F  + K G  PD  T  +LLHGL    ++       
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 634 -HLVSSG-------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            ++V +G        +++V          +N LINGL  EG   +A+ L++ M+GKG   
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259

Query: 686 DATTHGLLV 694
           D  T+G +V
Sbjct: 260 DVVTYGTIV 268



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 38/200 (19%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDT 204
           RV+  M++L  ++  G   +   +N ++    E +    A  +F  +EM+  G+ P+  T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF--QEMISHGVCPDTIT 504

Query: 205 LNYLLEVLFETNRIESALDQFR--RMHK------------KGCC---------------- 234
            N LL    E  ++E AL+ F   +M K             G C                
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 235 -----PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
                P+ +T+ ++I G    S + D+  +  +M D G + + S Y  +I    +  +++
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 290 EAIRLFKMMRALDLMPDELT 309
           ++I L   MR+     D  T
Sbjct: 625 KSIELISEMRSNGFSGDAFT 644


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 251/569 (44%), Gaps = 26/569 (4%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           E  ++ +   LSP  +  ++ N  +     + F W S  KRF+  A   C +I  L +  
Sbjct: 47  EPALEPMVPFLSPKIVTSIIQNPPNPQLGFRFFIWASNFKRFR--AWESCDLITDLLI-- 102

Query: 111 NVEEMEGLCQNMVKERYPNVR---EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           N   +E  CQ +   +   ++   +A   L+  ++     + AM    +M        V 
Sbjct: 103 NQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVY 162

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +N++L  ++ +K      + VY  M+K   +PNV T + L++ L ++  ++ AL  F  
Sbjct: 163 TYNMILDVLI-QKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDE 221

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M ++G  P++ T+ +VI GL  + RVDD+  +  +M D G+  +      ++   C  ++
Sbjct: 222 MTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDR 281

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++EA  L ++      + D   Y  LI  L    R +D   +   MI   + P   ++  
Sbjct: 282 VDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTI 341

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI-LEKMADR 402
           +++GL E GK  +++  L +       P    +N L++  C+ G    A+ + LE     
Sbjct: 342 MMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHD 401

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              +  +++I I  +C N   R A E+   M      P   T+++ + G CK    E A 
Sbjct: 402 CFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAH 461

Query: 463 RVF-------------RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            +F             R     S VLDS S  K+VE LC    I +A  +   ++ +G +
Sbjct: 462 LLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDA 521

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++NIL+ G C +   + A +L       G S  T TY  ++ GL++ QR +D   V
Sbjct: 522 PGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKV 581

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             QM   GC  D   Y  ++  M  + +L
Sbjct: 582 FDQMEKNGCTPDAAVYRTMMTWMCRRMEL 610



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 147/290 (50%)

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++N+ +  L +   +  A  +  RM+  + +P+ AT+S  + G CK  N +DAL +
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F +++ + ++ D+ +Y  ++ GLC+ +++ +A  +F  M  +G      + N L+ G C+
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
           + +VD+A  L  L    G       Y+ ++ GL + +R +D+ ++  +M+ +    DV  
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y I+++ ++E  K++D     N M ++G+VPD      L+ G  D   L    S   ++ 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 +   Y+ILI+G+ + GLT  A  + + M   G  P A T   L+
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLI 448



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 116/521 (22%), Positives = 210/521 (40%), Gaps = 62/521 (11%)

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           ++L   N +E        +   G   ++  F ++IK  +     D ++   G M D    
Sbjct: 99  DLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCT 158

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++  Y  I+ +L ++N L  A+ ++  M  L+ +P+  T+  LI+ LC++  + DA  +
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----------------------- 366
            ++M   G+ P    +  ++ GLC   + D++    +                       
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 367 --------------DKCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
                         +K GYV     ++ L+     A ++   + +  KM +  +  D   
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           + I ++ L E  ++R A ELL  M  S VVPD   Y+  + G C +    +A  +  ++S
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 +  +YS L+ G+C+     +A E+F  M K GC  S+ +FN LI GLC   +++
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           KA     L Y        S + ++  G   +  +  L  ++ Q+   G  L  +AY IL+
Sbjct: 459 KA---HLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSG--LIHKAYRILM 513

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           Q                 +  +G  P   T   L++G       +       ++      
Sbjct: 514 Q-----------------LADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLS 556

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            D+  Y  LINGL +      A  + D M   G  PDA  +
Sbjct: 557 PDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVY 597



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 185/477 (38%), Gaps = 80/477 (16%)

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           GI++    +  +I +  +    ++A+  F  MR  D  PD  TY  +++ L +   L  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
             +   M+ +   P    F  ++ GLC+ G   ++++                       
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALH----------------------- 217

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                   + ++M  R I  D  ++ + I  LC ++ +  AY L  +M  S V PD  T 
Sbjct: 218 --------LFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTC 269

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +A + G C L   ++A  + R       VLD   YS L+ GL + ++  +   ++  M +
Sbjct: 270 NALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIE 329

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           +        + I++ GL    KV  A+ L +    SG    T  Y  ++ G   +    +
Sbjct: 330 DNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSE 389

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
              +  ++    C  +V+ Y ILI  M      +D    FN M K G  P   T  SL+ 
Sbjct: 390 ARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLID 449

Query: 626 GLADGSQL---HLV-------------------------SSGINKLVS---DSEVLDSSM 654
           GL    QL   HL+                         S+ + K+V    DS ++  + 
Sbjct: 450 GLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAY 509

Query: 655 -----------------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                            YNIL+NG  K G  + A  L   M  KG  PD  T+G L+
Sbjct: 510 RILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLI 566


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 231/526 (43%), Gaps = 19/526 (3%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R   D V  +  MV+    P     + LL  +       +A+  F ++  KG  P+  TF
Sbjct: 34  RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I+I      S    + S+L  +   G Q  L  +  II   C    + +A+   + + A
Sbjct: 94  TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
              + D+ TY  LIN L +N ++  A  +L++M    + P   ++  ++ GLC+ G    
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG---- 209

Query: 361 SVNFLEDKCGYVTS-----------PHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
              F+ D  G  +             +N+L++ CC+ G++     +L KM    +   D 
Sbjct: 210 ---FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++NI I  LC+   I +A  +L  M      PD  TY+A + G C   N  +A  +F ++
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + L  D ++Y+ L++G C+ + + EA+ +F  +       + +S+N LI GLC   ++
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
               +L    + S       TY  ++  L K  R  + L VL  M+ +G   ++  Y  +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           +     +N +      FN MVK+GL PD      L++G      +        ++   + 
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + D + YN LI+GL   G       LLD M   G  PD  T+ +L+
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/543 (23%), Positives = 238/543 (43%), Gaps = 12/543 (2%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           VF+ +LGAIV     +   + ++ ++   GI P++ T   L+   F  +    A      
Sbjct: 57  VFDKLLGAIVRMGH-YPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + K G  PN  TF  +I G   N  +  ++     +   G   +   Y  +I  L +  +
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A+ L + M    + P+ + Y  LI+ LC++  + DA  +   +   G+      +  
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR- 402
           ++ G C VG++ E    L         P     N L++  C  G+   A+ +L  M+ R 
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  D  ++N  +   C  E + +A EL  RMV   + PD   Y+  + G CK    ++A+
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F+++  ++LV    SY+ L++GLC   +I+   ++   M  +       ++NILI  L
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCA 579
           C   ++ +A+ +  +    G      TY  +M G      +  AKD   +  +M+  G  
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD---IFNRMVKSGLE 472

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            D+  Y +LI    +   + +  + F  M    L+PD  +  SL+ GL +  ++  V   
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           ++++    +  D   YNIL++   K     +A  L   ++   W    T H ++     G
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKG 592

Query: 700 EEI 702
           E++
Sbjct: 593 EKL 595



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 142/627 (22%), Positives = 264/627 (42%), Gaps = 46/627 (7%)

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           NV++       MV+   P        L+ + V       A+ +   + S G   S+  F 
Sbjct: 35  NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           +++     +      F  +   ++K+G  PN+ T N ++        I  ALD  + +  
Sbjct: 95  ILINCYFHQSHTAFAFSLL-ATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           +G   +  T+  +I GL  N ++  ++ +L EM    +Q  L  Y+ +I  LC++  + +
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+ L   +    ++ D +TY  LI+  C   R  +   +L  M+   + P D  F  ++ 
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 351 GLCEVGKFDESVNFLE------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
            LC+ G+  E+   L       +K   VT  +NAL+E  C+      A+ +  +M  R +
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVT--YNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N+ I   C+ + + +A  L   +   ++VP  A+Y++ + G C         +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV-------------------------- 497
           +  ++   +   D ++Y+ L++ LC+  +I EA+                          
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 498 ---------EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
                    ++F  M K+G      ++N+LI G C    VD+AI L             +
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +Y  ++ GL  L R   +  +L +M   G + DV  Y IL+ +  +          F  +
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           V+ G+ PD  T  +++  L  G +L +    +  L+      +   Y ILIN L K+G  
Sbjct: 572 VE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSF 630

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVG 695
            +A  LL  M      PDA T  +++G
Sbjct: 631 GEAMLLLSKMEDNDRPPDAITFEIIIG 657



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 127/603 (21%), Positives = 258/603 (42%), Gaps = 44/603 (7%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           ++  +Q    T+  +I    + G + +    CQN++ + Y   +    +L+     + ++
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLN 206
             A+ +L  M     + ++ +++ ++  +   K GF +D + +  ++ + GI+ +  T N
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLC--KDGFVSDALGLCSQIGERGILLDAVTYN 234

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++      R +       +M ++   P+  TF I+I  L    R+ ++  +L  M   
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G + ++  Y  ++   C    + EA  LF  M    L PD L Y  LI+  C+   +D+A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             + +++    L PT   +  ++ GLC  G+       L++  G    P    +N L++ 
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+   A  +L  M  + +  +  ++N  +   C    +  A ++  RMV S + PD
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              Y+  + G CK    ++A+ +F+++  ++L+ D  SY+ L++GLC + +I    E+  
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M  +G S    ++NIL+   C  +  DKAI L                           
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISL--------------------------- 567

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
                     + +VEG   D      ++ ++ +  KLK        ++  G  P+ +T  
Sbjct: 568 ---------FRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            L++ L            ++K+  +    D+  + I+I  L +   T +A  L + M+ +
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678

Query: 682 GWV 684
           G V
Sbjct: 679 GLV 681


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 235/539 (43%), Gaps = 46/539 (8%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G   N  +   L++ L +   +  AL  F  M + GC PN R F  +I GL  + RV D+
Sbjct: 133 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 192

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +   M   G+   +  Y  +I    +  ++ +A+++ ++M      PD+ TY  LI  
Sbjct: 193 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 252

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKC--- 369
           LC+  + ++A ++L + +  G TPT   F +++ G C   KFD+++      +  KC   
Sbjct: 253 LCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 311

Query: 370 ------------------------------GYVTS--PHNALLECCCNAGKFFLAKCILE 397
                                         G V +   + ++++  C +GK  +A  +L 
Sbjct: 312 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL- 370

Query: 398 KMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           KM +R     ++W  N  +  L +++++ KA  LL +M    ++P+  TY+  + G+C  
Sbjct: 371 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 430

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            ++++A R+F  +    L  D  +Y+ L + LC   K   A E +  + + G +L+   +
Sbjct: 431 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---KAGRAEEAYSFIVRKGVALTKVYY 487

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI G       D A  L       G +  + TY+ ++  L K +R  + L +L QM +
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G    + AY ILI  M  + K       +N M  +G  P   T    ++      +L  
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 607

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               I K+  +    D   YNILI+G    G   +A   L  M+G    P+  T+ LL+
Sbjct: 608 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 150/642 (23%), Positives = 285/642 (44%), Gaps = 31/642 (4%)

Query: 76  LSSALKIFKWVSIQKRFQHTAD-TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           ++ ALKI +   ++K   H  D TY  +I  L      EE E L  N VKE +       
Sbjct: 224 MNDALKIKEL--MEKNGCHPDDWTYNTLIYGL-CDQKTEEAEELLNNAVKEGFTPTVVTF 280

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +L+  +    + + A+R+   M S   KL + VF  ++ +++++ R   +   +  E+ 
Sbjct: 281 TNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR-LKEAKELLNEIS 339

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G+VPNV T   +++   ++ +++ AL+  + M + GC PN+ T+  ++ GL+ + ++ 
Sbjct: 340 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 399

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++++L +M   GI   +  YT ++   C E+  + A RLF+MM    L PDE  Y  L 
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCG 370
           + LC+  R ++A   +   +  G+  T   +  ++ G  + G  D +   +E    + C 
Sbjct: 460 DALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 516

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYE 428
             +  ++ LL   C   +   A  IL++M+ R I  C   ++ I I  +    +   A  
Sbjct: 517 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK-CTIFAYTILIDEMLREGKHDHAKR 575

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   M  S   P   TY+ F+   CK    EDA  +  ++  + +  D ++Y+ L++G  
Sbjct: 576 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 635

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIY-----GLCVMRKVDKA-----------I 532
            +  I  A      M    C  +  ++ +L+       L  +R VD +            
Sbjct: 636 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITW 695

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +L       G + T +TY+ ++ G  K  R ++  ++L  M  +G + + + Y +LI+  
Sbjct: 696 QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCC 755

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +    +    F ++M + G  P  E+   L+ GL +      V S    L+      D 
Sbjct: 756 CDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDE 815

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             + IL +GL K G       +L +M  +     + T+ L+ 
Sbjct: 816 VAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVT 857



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/553 (23%), Positives = 238/553 (43%), Gaps = 51/553 (9%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF------VYKEMVKAGIVPNVD 203
           A++ +    S    LS   +N  L       R  A F        VY ++V+ G++P+  
Sbjct: 17  AIQAIRRTGSARLALSPKCYNFAL-------RSLARFDMTEYMGRVYSQLVQDGLLPDTV 69

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N +++   +   + +A   FR + + G  P + T   ++ G      +  +  +   M
Sbjct: 70  TYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 129

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
             +G Q     YT +I  LC    + +A+ LF MM+     P+   +  LI+ LC++ R+
Sbjct: 130 PLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 189

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
            DA  + + M   G+ P+   +  ++ G  ++G+ ++++                     
Sbjct: 190 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK-------------------- 229

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
                       ++++ ++     D W  N  I  LC+ ++  +A ELL   V     P 
Sbjct: 230 ------------IKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPT 276

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T++  + G C    ++DALR+  ++ +    LD   + KL+  L + +++ EA E+  
Sbjct: 277 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN 336

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            +S NG   +  ++  +I G C   KVD A+ +  +    G      TY  +M GLVK +
Sbjct: 337 EISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 396

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           +    + +L +M  +G   +V  Y  L+Q   +++   +    F +M + GL PD     
Sbjct: 397 KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYA 456

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            L   L    +     S I   V     L    Y  LI+G  K G T  A+ L++ M+ +
Sbjct: 457 VLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 513

Query: 682 GWVPDATTHGLLV 694
           G  PD+ T+ +L+
Sbjct: 514 GCTPDSYTYSVLL 526



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 250/601 (41%), Gaps = 55/601 (9%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V  A+ + + M   G   +V  F  ++  + +  R   D   ++  M + G+VP+V T N
Sbjct: 154 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR-VGDARLLFDAMPQNGVVPSVMTYN 212

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            ++    +  R+  AL     M K GC P+  T+  +I GL  + + +++  +L      
Sbjct: 213 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL-CDQKTEEAEELLNNAVKE 271

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G    +  +T +I   C   K ++A+R+   M +     D   + +LIN L +  RL +A
Sbjct: 272 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 331

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLEC 382
            ++L ++   GL P    +  I+ G C+ GK D ++  L+    D C      +N+L+  
Sbjct: 332 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 391

Query: 383 CCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
                K   A  +L KM  D  I +  ++   ++  C+  +   A+ L   M  + + PD
Sbjct: 392 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 451

Query: 442 CATYSAFVLGKCKLCNYEDALR-VFRQVSAQSLVL------------------------- 475
              Y+      CK    E+A   + R+  A + V                          
Sbjct: 452 EHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 511

Query: 476 ------DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 DS +YS L+  LC+ +++ EA+ +   MS  G   +  ++ ILI  +    K D
Sbjct: 512 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHD 571

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A R+ +   SSG   + +TYT  +    K  R +D   ++ +M  EG A DV  Y ILI
Sbjct: 572 HAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI 631

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS---SG------- 639
                   +         MV A   P+  T   LL  L  G+  ++ S   SG       
Sbjct: 632 DGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIEL 691

Query: 640 ------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 + ++V        + Y+ LI G  K G   +A  LLD M GKG  P+   + LL
Sbjct: 692 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 751

Query: 694 V 694
           +
Sbjct: 752 I 752



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 188/427 (44%), Gaps = 31/427 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y   +  L R +  E   R++  +    L+PD +TY  +I   C+   L  A+     ++
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             GL P       +V G C  G+  ++         ++  P   L+ C  N         
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWL------FLMMP---LMGCQRNEY------- 139

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                         S+ I I+ LC+ + +RKA  L   M      P+   ++  + G CK
Sbjct: 140 --------------SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCK 185

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                DA  +F  +    +V   ++Y+ ++ G  ++ ++ +A+++   M KNGC     +
Sbjct: 186 SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 245

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LIYGLC  +K ++A  L + A   G + T  T+T ++ G    ++  D L +  +M+
Sbjct: 246 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 304

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
              C LD++ +  LI S+ ++++LK+     N +   GLVP+  T  S++ G     ++ 
Sbjct: 305 SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVD 364

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    +  +  D    ++  YN L+ GL K+    +A  LL  M   G +P+  T+  L+
Sbjct: 365 IALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 424

Query: 695 GSSVGEE 701
                E 
Sbjct: 425 QGQCDEH 431



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 207/504 (41%), Gaps = 22/504 (4%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAM 151
           Q  A TY  ++  L     + +   L   M K+   PNV     +L+    + +  + A 
Sbjct: 379 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI-TYTTLLQGQCDEHDFDNAF 437

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           R+   M   G K     + V+  A+ +  R    + F+    V+ G+         L++ 
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI----VRKGVALTKVYYTTLIDG 493

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +    + A     RM  +GC P+S T+ +++  L    R+++++ IL +M   GI+  
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  YT +I  + RE K + A R++  M +    P   TY   IN  C+  RL+DA D++ 
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
            M   G+ P    +  ++ G   +G  D + + L+   G    P N    C        L
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP-NYWTYC------LLL 666

Query: 392 AKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
              +   +A  +  D    WN+         E+   ++LL RMV   + P   TYS+ + 
Sbjct: 667 KHLLKGNLAYVRSVDTSGMWNLI--------ELDITWQLLERMVKHGLNPTVTTYSSLIA 718

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    E+A  +   +  + L  +   Y+ L++  C  +   +A+     MS+ G   
Sbjct: 719 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 778

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S+ +L+ GLC     +K   L       G ++    +  +  GL+K         +L
Sbjct: 779 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 838

Query: 571 AQMLVEGCALDVEAYCILIQSMSE 594
           + M    C +  + Y ++   M E
Sbjct: 839 SIMEKRYCCISSQTYALVTNKMHE 862


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 155/664 (23%), Positives = 281/664 (42%), Gaps = 73/664 (10%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           ++S      E +++ L  +L P  +  VL    D   AL+ F W   Q R++H    Y  
Sbjct: 80  LRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYA 139

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+  L      +  + + + M K R     EA   ++ S+    ++  AMR L  M    
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQ--- 196

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
                                            KAGI P++   N  + VL   NR++ A
Sbjct: 197 ---------------------------------KAGIEPDLSICNTAIHVLVMGNRLDKA 223

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +    RM      PN  T+  +IKG     R++D+  ++ EM   G   +   Y  ++  
Sbjct: 224 VRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGF 283

Query: 282 LCRENKLEEAIRLF--KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
           LC+E +++E +RL   KM++  +L+PD++TY   ++ L ++   D+A + L +       
Sbjct: 284 LCKEKRIKE-LRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA------ 336

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
                               E   F  DK GY     +A++   C  G+   AK I+ +M
Sbjct: 337 --------------------EERRFRVDKVGY-----SAIVHSFCREGRMDKAKEIVNEM 371

Query: 400 ADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             +  I D  ++   I  LC+  ++ +A ++L +M      P+  +Y+A + G CK  N 
Sbjct: 372 FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 431

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +A  +         + ++I+YS L+ G  +  K +EA ++   M K G   +    N+L
Sbjct: 432 LEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I  LC   KVD+A R      ++G +     +T ++ G  +    +  L +L  M +   
Sbjct: 492 IQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK 551

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y  +I ++ ++ ++++       M++ G +P   T  +++H      ++  +  
Sbjct: 552 HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLK 611

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            + K++S  E    + YN +I  L   G   QA  LL  +L      DA T  +L+ S +
Sbjct: 612 LLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYL 669

Query: 699 GEEI 702
            + I
Sbjct: 670 SKGI 673


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 220/484 (45%), Gaps = 33/484 (6%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A+ +L  M   G++ S+   + +L      KR  +D V +  +MV+ 
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEM 184

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+  T   L+  LF  N+   A+    RM ++GC PN  T+ +V+ GL     +D +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
            ++L +M    I+  +  Y+ +I  LC+    ++A+ LF  M    + P+ +TY  LI+C
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   R  DA+ +L DMI   + P    F                               
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTF------------------------------- 333

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NAL++     GK   A+ + ++M  R I  D  +++  I   C ++ + +A  +   M+ 
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               P+  TY+  + G CK    ++ + +FR++S + LV ++++Y+ L+ G  Q      
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  VF  M  +G   +  ++N L+ GLC   K++KA+ +      S    T  TY  ++ 
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G+ K  + +D   +   + ++G   DV  Y  +I     +   ++    F  M + G +P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573

Query: 616 DRET 619
           D  T
Sbjct: 574 DSGT 577



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/510 (21%), Positives = 232/510 (45%), Gaps = 5/510 (0%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + ++  MVK+  +P++   N LL  + +  + +  +    +M + G   N  T+ I+I
Sbjct: 68  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                 S++  ++++LG+M  LG +  +   + ++   C   ++ +A+ L   M  +   
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +T+  LI+ L  + +  +A  +++ M+  G  P    +  +V GLC+ G  D + N 
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247

Query: 365 LED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L      K       ++ +++  C       A  +  +M ++ +  +  +++  I  LC 
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            E    A  LL  M+   + P+  T++A +    K     +A +++ ++  +S+  D  +
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L+ G C  +++ EA  +F  M    C  +  ++N LI G C  +++D+ + L     
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G    T TYT ++ G  + +   +  +V  QM+ +G   ++  Y  L+  + +  KL+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
              + F  + ++ + P   T   ++ G+    ++         L       D  +YN +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           +G  ++GL  +A  L   M   G +PD+ T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 1/319 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N LL       KF L   + EKM    I+ +  ++NI I   C   +I  A  LLG+M+ 
Sbjct: 89  NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               P   T S+ + G C      DA+ +  Q+       D+I+++ L+ GL    K +E
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           AV +   M + GC  +  ++ +++ GLC    +D A  L +   ++        Y+ ++ 
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            L K +   D L +  +M  +G   +V  Y  LI  +    +  D +   + M++  + P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  +L+       +L       ++++  S   D   Y+ LING        +A ++ 
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388

Query: 676 DLMLGKGWVPDATTHGLLV 694
           +LM+ K   P+  T+  L+
Sbjct: 389 ELMISKDCFPNVVTYNTLI 407



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 1/226 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+    N+ R + A R+L +M       +V  FN ++ A V+E +   +   +Y EM+K
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK-LVEAEKLYDEMIK 358

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             I P++ T + L+      +R++ A   F  M  K C PN  T+  +I G     R+D+
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            V +  EM   G+      YT +I    +    + A  +FK M +  + P+ +TY  L++
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            LC+N +L+ A  + E +    + PT   +  ++ G+C+ GK ++ 
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 103/236 (43%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           +DA+ +F  +     +     ++KL+  + +++K    + +   M + G S +  ++NIL
Sbjct: 67  DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I   C   ++  A+ L       G   +  T + ++ G    +R  D + ++ QM+  G 
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D   +  LI  +   NK  +     + MV+ G  P+  T   +++GL     + L  +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +NK+ +     +  +Y+ +I+ L K      A  L   M  KG  P+  T+  L+
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 215/453 (47%), Gaps = 10/453 (2%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS-IQKRFQ 93
           + S++ ++KS+  T     I+     LSP  ++ ++    +L  AL+IF       + F 
Sbjct: 76  VDSKSTLLKSYTVT---PPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFA 132

Query: 94  HTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV 153
           H  +TY  MI KL  A   E ME L   + K +        I+++ ++    R   A+R 
Sbjct: 133 HNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRT 192

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVL 212
            + + S G + SV  FN +L  +V+ KR F     ++K   K  GIVPNV T N L++ L
Sbjct: 193 FLRIPSFGLQPSVRSFNTLLNTLVQNKR-FDLVHLMFKNCRKKFGIVPNVFTCNILVKAL 251

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            + N I++A+     M   G  PN  T+  ++ G ++   +  +  + GE+ D G   + 
Sbjct: 252 CKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDP 311

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + YT ++   C++ +  +A+++   M    + P+++TY  +I   C+  +  +  ++L+D
Sbjct: 312 TTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD 371

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGK 388
           M+     P+  +   ++  LCE GK + +    +       +P NA    L+   C  GK
Sbjct: 372 MLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGK 431

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
            + A+ + ++     I    ++N  I  +CE  E+ +A  L   MV    VP+  TY+  
Sbjct: 432 VWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           + G CK+ N  + +RV  ++     + +  +Y+
Sbjct: 492 IKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/425 (19%), Positives = 184/425 (43%), Gaps = 13/425 (3%)

Query: 278 IIPMLCRENKLEEAIRLF----KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           ++ M+ R+  L+ A+++F    K  R  +   +  TY  +I  L +    +    ++  +
Sbjct: 104 VVSMISRQQNLDLALQIFDHAGKFHR--NFAHNYETYLAMIEKLSKARAFEPMETLISQL 161

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
               +   +++F+ ++R     G+   ++        +   P     N LL       +F
Sbjct: 162 HKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF 221

Query: 390 FLAKCILEKMADR--KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
            L   + +    +   + +  + NI ++ LC+  +I  A  +L  M     +P+  TY+ 
Sbjct: 222 DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTT 281

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G     +   A RVF ++  +  V D  +Y+ L++G C+  +  +AV+V   M +N 
Sbjct: 282 ILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENR 341

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              +  ++ ++I   C  +K  + + L           +++   +++  L +  + +   
Sbjct: 342 VEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVAC 401

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  ++L + C  D      LI  + ++ K+ +    F+   K G +P   T  +L+ G+
Sbjct: 402 ELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEK-GSIPSTLTYNALIAGM 460

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
            +G +L   +   + +V    V ++  YN+LI G  K G   +   +++ ML  G +P+ 
Sbjct: 461 CEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNK 520

Query: 688 TTHGL 692
            T+ +
Sbjct: 521 ATYAI 525



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/404 (19%), Positives = 174/404 (43%), Gaps = 8/404 (1%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            D   + H+     N  T+  +I+ L      +   +++ ++    I+   + +  +I  
Sbjct: 121 FDHAGKFHRN-FAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRN 179

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED-MIVIGLTP 340
                + + AIR F  + +  L P   ++  L+N L +N R D  + + ++     G+ P
Sbjct: 180 YGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVP 239

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCIL 396
                  +V+ LC+    D ++  LE+    G++ +   +  +L    + G    A+ + 
Sbjct: 240 NVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVF 299

Query: 397 EKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            ++ DR  + D  ++ I +   C+      A +++  M  + V P+  TY   +   CK 
Sbjct: 300 GEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKE 359

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               + L +   +  +  +  S    ++++ LC+  K+  A E++  + K  C+  ++  
Sbjct: 360 KKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAIT 419

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + LI+ LC   KV +A +L    +  G+  +T TY  ++ G+ +     +   +   M+ 
Sbjct: 420 STLIHWLCKEGKVWEARKLFD-EFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE 478

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           +GC  +   Y +LI+   +    ++       M+  G +P++ T
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKAT 522


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 203/443 (45%), Gaps = 5/443 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  EM K  + P+V T N +++  F     E+A+     M  KG  P   T+  V+KGL 
Sbjct: 117 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 176

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +   D +  +  EM D G+  ++  +T +I   CR  ++EEA++++K MR   + PD +
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 236

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           ++  LI       ++D A   L +M   GL P   ++  ++ G C  G   +++   ++ 
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
            G    P    +N LL   C   +   A+ +L +M +R +  D  ++   I   C   ++
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 356

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA +L   M+   + PD  TY+  + G C+  + + A  ++  + ++ +  + ++YS L
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++  C+  ++ +A      M   G   +  ++N +I G C    V K  +       +  
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           S    TY  ++ G +K  +  D   +L  M  E    DV  Y +LI   S    +++   
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536

Query: 604 FFNVMVKAGLVPDRETMLSLLHG 626
            F  M   G+ PDR T +S+++G
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMING 559



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 180/401 (44%), Gaps = 37/401 (9%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G +EE   + + M   R+  ++  L+S   L+  F    +++ AM  L  M   G     
Sbjct: 214 GEIEEALKIYKEM---RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 270

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
            ++ +V+G         +D + V  EMV  G +P+V T N LL  L +  R+  A     
Sbjct: 271 VIYTMVIGGFCRAGL-MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 329

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M ++G  P+  TF  +I G     ++D ++ +   M +  ++ ++  Y  +I  +CR+ 
Sbjct: 330 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 389

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
            L++A  L+  M + ++ P+ +TY  LI+  CE  +++DA   L++MI  G+ P    + 
Sbjct: 390 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 449

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
            I++G C  G   +                          G+ FL K ++ K++     D
Sbjct: 450 SIIKGYCRSGNVSK--------------------------GQKFLQKMMVNKVS----PD 479

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I    + +++  A++LL  M    V PD  TY+  + G     N ++A  +F 
Sbjct: 480 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 539

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           ++ A+ +  D  +Y  ++ G        EA ++   M + G
Sbjct: 540 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 197/483 (40%), Gaps = 5/483 (1%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A D +R +       N+ T  I++         D   +++ EM    +  ++  +  ++ 
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
              R    E A+ L   M +  L P  +TY  ++  LC +   D A ++ ++M   G+ P
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC----CNAGKFFLAKCIL 396
               F  ++ G C VG+ +E++   ++       P      C        GK   A   L
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258

Query: 397 EKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M     + D   + + I   C    +  A  +   MV    +PD  TY+  + G CK 
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 318

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               DA  +  ++  + +  D  +++ L+ G C   K+ +A+++F  M          ++
Sbjct: 319 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 378

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI G+C    +DKA  L    +S        TY+ ++    +  + +D    L +M+ 
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 438

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +G   ++  Y  +I+       +     F   M+   + PD  T  +L+HG     ++H 
Sbjct: 439 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 498

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
               +N +  +    D   YN+LING    G   +A ++ + M  KG  PD  T+  ++ 
Sbjct: 499 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 558

Query: 696 SSV 698
             V
Sbjct: 559 GHV 561



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 110/522 (21%), Positives = 218/522 (41%), Gaps = 51/522 (9%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P  R F+++I+    + +  ++      + D  + +  +    ++  L R      A   
Sbjct: 23  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRG 351
           ++++ + +   +  T   +++  C+ L  D  + ++ +M    + P   T +V VD    
Sbjct: 83  YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD---A 139

Query: 352 LCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
               G  + ++  ++       K G VT  +N++L+  C +G +  A  + ++M D  +A
Sbjct: 140 RFRAGDAEAAMALVDSMVSKGLKPGIVT--YNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S+ I I   C   EI +A ++   M    + PD  ++S  +    +    + A+  
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
            R++    LV D + Y+ ++ G C+   +++A+ V   M   GC     ++N L+ GLC 
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLL-----------VVL 570
            R++  A  L +     G      T+T ++ G     KL +A  L            +V 
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 571 AQMLVEGCALDVE---------------------AYCILIQSMSEQNKLKDCALFFNVMV 609
              L++G     +                      Y ILI S  E+ +++D   F + M+
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G++P+  T  S++ G      +      + K++ +    D   YN LI+G  KE    
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFD 710
            A  LL++M  +   PD  T+ +L+ G SV   +    + F+
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 539


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 240/522 (45%), Gaps = 48/522 (9%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C PN  T+ I+I+G  +   +D ++ +L EM   G +     +T ++  LC   ++ EA+
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
             F+ M A D  PD +TY  L++ LC+  + D+A  +L +MI  G  P    F  ++ GL
Sbjct: 65  EHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 353 CEVGKFDESVNFLEDK-------------------CGYVTSPH----------------- 376
           C+ G  +++   LED                    C    S                   
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 377 ----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
               N ++   C A     A  +LE M ++  + +  ++ I I  LC+   + +A +LL 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +MV     P+  TYS  + G CK    +DA  +F+ +  ++   + ++++ L++GLC+ +
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-TY 550
           +I EA +++  M + GC+    ++N LI GLC   +VD+A +L      SG S   + TY
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 363

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + +  G   L R  D   + + ++ +G + D+  Y  LI    + ++  +       M  
Sbjct: 364 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G  P   T+ ++L GL +G+         + + +     D+ +YN+++ G+ +    ++
Sbjct: 424 KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNK 483

Query: 671 ASYLLDLMLGK---GWVPDATTHGLLVGS--SVGEEIDSRRF 707
           A  +L+ ++ K    + P ++    LV S   VG   D+++ 
Sbjct: 484 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQL 525



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 132/581 (22%), Positives = 260/581 (44%), Gaps = 38/581 (6%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F +   ++ A+++L  M S GF+ +  V   ++  + +  R   + +  ++ M K 
Sbjct: 15  LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGR-VVEALEHFRAMAK- 72

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
              P+V T   L+  L +  + + A    R M  +GC P++ TF  +I GL      + +
Sbjct: 73  DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQA 132

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRE-NKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             +L ++   G+    + +  II  LC + N +E A ++  ++ A    P  L +  +IN
Sbjct: 133 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 192

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C+   LD A  +LE MI  G  P    F  ++ GLC+  +  E+   LE       SP
Sbjct: 193 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSP 252

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           +                                +++  I  LC+  ++  AYEL   M  
Sbjct: 253 NVV------------------------------TYSTVINGLCKQGQVDDAYELFQLMER 282

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            +  P+  T++  + G CK    E+A +++ ++       D I+Y+ L++GLC+  ++ E
Sbjct: 283 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 342

Query: 496 AVEVFCCMSKNGCSLSSS-SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           A ++F  + ++G S +++ +++ L +G   + ++  A R+ S+    G S   +TYT ++
Sbjct: 343 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
           L   K  RA +++ ++ +M  +G    V     ++  + E N  +     F+ M   G  
Sbjct: 403 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 462

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV---LDSSMYNILINGLWKEGLTSQA 671
            D      ++ G+A  S+ +   + + +++   +      SS  + L+  L + G T  A
Sbjct: 463 DDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDA 522

Query: 672 SYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDS 711
             LL  M  +G+    +++ GLL G S  +  D     F++
Sbjct: 523 KQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEA 563



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 249/605 (41%), Gaps = 44/605 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L  AG  +E +G+ + M+            +L+           A RVL ++
Sbjct: 80  TYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 139

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G   S   F  ++  +  +         V   ++  G  P V   N ++    +   
Sbjct: 140 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 199

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++SA      M +KGC PN  TF I+I GL   +RV ++  +L +M   G    +  Y+ 
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC++ ++++A  LF++M   +  P+ +T+  LI+ LC+  R+++A  +   M   G
Sbjct: 260 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
             P    +  ++ GLC+  + DE+    +       S  NA+          F     L 
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV-----TYSTLFHGYAALG 374

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           +MAD                        A  +   +V     PD ATY++ +L  CK   
Sbjct: 375 RMAD------------------------ACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
             + + +  +++++       + S ++ GL +      A+++F  M+  GC+  +  +N+
Sbjct: 411 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 470

Query: 518 LIYGLCVMRKVDKAI---------RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           ++ G+    K +KA+         R R    SS      S    ++  L ++ R  D   
Sbjct: 471 VVEGMARASKHNKALAVLEQVIDKRDRKFNPSS------SAVDALVESLCQVGRTDDAKQ 524

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L +M   G A  V +Y  L+  +S   +  +    F  MV AG  P+  T+  ++  L 
Sbjct: 525 LLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLC 584

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
             +++      + ++       D    N LI G  K G    A  LL+ M   G  P+ T
Sbjct: 585 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDT 644

Query: 689 THGLL 693
           TH LL
Sbjct: 645 THDLL 649



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 219/494 (44%), Gaps = 15/494 (3%)

Query: 68  RVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER- 126
           R+ +  N +  A K+   V I K F  T   +  +I     A +++    L + M+++  
Sbjct: 157 RLCNKYNSVELASKVL-GVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC 215

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
            PNV    I L+       RV  A ++L  M +GG   +V  ++ V+  +   K+G  D 
Sbjct: 216 VPNVFTFTI-LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLC--KQGQVDD 272

Query: 187 VF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + +++ M +    PNV T N L++ L +  RIE A   + RM + GC P+  T+  +I 
Sbjct: 273 AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID 332

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSF-YTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           GL  + +VD++  +   + + G+    +  Y+ +        ++ +A R+F M+      
Sbjct: 333 GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFS 392

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD  TY  LI   C+  R  +  +++E+M   G  P  +    ++ GL E    + ++  
Sbjct: 393 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQL 452

Query: 365 LED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKM---ADRKIADCDSW-NIPIRW 416
            +      C      +N ++E    A K   A  +LE++    DRK     S  +  +  
Sbjct: 453 FDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVES 512

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+      A +LL +M         ++Y+  + G  +L  +++A +VF  + +     +
Sbjct: 513 LCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPE 572

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             + + ++  LC   K+ +A E+   MSK GC     + N LI G C   + D A +L  
Sbjct: 573 ISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLE 632

Query: 537 LAYSSGTSYTTSTY 550
               +G     +T+
Sbjct: 633 EMTEAGLEPNDTTH 646



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 41/231 (17%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS- 251
           M   G  P V+TL+ +L  LFE N  E A+  F  M  +GC  ++  + +V++G+   S 
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480

Query: 252 -------------------------------------RVDDSVSILGEMFDLGIQLELSF 274
                                                R DD+  +L +M + G    +S 
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSS 540

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++  L R  + +EA ++F+ M +    P+  T   +I+ LC   ++DDA ++++ M 
Sbjct: 541 YNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 600

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA---LLEC 382
            +G  P  +    ++ G C+ G+ D +   LE+       P++    LLEC
Sbjct: 601 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 651


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 236/527 (44%), Gaps = 42/527 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L AIV+  + +   + + K+M  AG+ PN+ TL+ L+       R++ A     ++
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P   TF  +I  L    +   ++ +  +M   G + ++  YT II  LC+  + 
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A  L K M      P+ +TY  +I+   ++ R+++A DI   M V G++P    +  +
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSL 279

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           ++GLC   ++ E+   L +       P     N L++  C  GK   A+ +L+ M +  +
Sbjct: 280 IQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  +       E+ +A +L   M+     PD  +Y+  + G CK+   ++A +
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  Q L  +++SY+ L+ GLCQ+  + EA  +F  M  NG   +  +++IL+ G C
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFC 459

Query: 524 VMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
                 KA RL R++          STY+K  L +                         
Sbjct: 460 KQGYFGKAFRLFRAMQ---------STYSKPNLVM------------------------- 485

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y ILI +M +   L+D    F+ +   GL P+ +   ++++GL     L         
Sbjct: 486 --YNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRN 543

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           +  D    D   YN++I G       S+A  L+  M  KG++ D  T
Sbjct: 544 MEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 187/392 (47%), Gaps = 10/392 (2%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           AM +  +M + G +  V  +  ++  +  + E    A  +   K+M +AG  PNV T + 
Sbjct: 187 AMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLL---KKMEEAGCQPNVVTYST 243

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           +++   +  R+  ALD F  M  KG  P+  T+  +I+GL   S+  ++ ++L EM  L 
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN 303

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I  ++  +  ++  +C+E K+ EA  + K M  + + PD +TY  L+        + +A 
Sbjct: 304 IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEAR 363

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECC 383
            + + MI  G  P    +  ++ G C+V + DE+     +      +P    +N L+   
Sbjct: 364 KLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGL 423

Query: 384 CNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C  G    A+ + + M  +  + +  +++I +   C+     KA+ L   M  +   P+ 
Sbjct: 424 CQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNL 483

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             Y+  +   CK  N  DA ++F ++  + L  ++  Y+ ++ GLC+   + EA+E F  
Sbjct: 484 VMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRN 543

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           M ++GC     S+N++I G    +   +A++L
Sbjct: 544 MEEDGCPPDEISYNVIIRGFLHHKDESRAVQL 575



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 213/460 (46%), Gaps = 7/460 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PN+    I L+  F +  RV+ A  VL  +   G + ++  F  ++  + +  + FA  +
Sbjct: 131 PNIYTLSI-LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK-FAQAM 188

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            ++ +MV  G  P+V T   ++  L +     +A    ++M + GC PN  T+  +I   
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
             + RV++++ I   M   GI  ++  Y  +I  LC  ++ +EA  L   MR+L++MPD 
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDI 308

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +T+  L++ +C+  ++ +A  +L+ M  +G+ P    +  ++ G     +  E+    + 
Sbjct: 309 VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDA 368

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEE 422
                  P    +N L+   C   +   AK +  +M  + +   + S+N  I  LC+   
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +R+A  L   M  +  +P+  TYS  + G CK   +  A R+FR + +     + + Y+ 
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++ +C+   + +A ++F  +   G   ++  +  +I GLC    +D+A+         G
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
                 +Y  I+ G +  +     + ++ +M  +G   DV
Sbjct: 549 CPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 190/457 (41%), Gaps = 40/457 (8%)

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +  I L K M    L P+  T   LINC     R+D A  +L  +I +GL PT   F  +
Sbjct: 115 DTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTL 174

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM----- 399
           +  LC+VGKF +++   +D       P    +  ++   C  G+   A  +L+KM     
Sbjct: 175 INWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGC 234

Query: 400 ---------------ADRKI----------------ADCDSWNIPIRWLCENEEIRKAYE 428
                           DR++                 D  ++N  I+ LC   + ++A  
Sbjct: 235 QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASA 294

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL  M   +++PD  T++  V   CK     +A  V + ++   +  D ++YS L+ G  
Sbjct: 295 LLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYS 354

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              ++ EA ++F  M   GC     S+NILI G C ++++D+A +L +     G +    
Sbjct: 355 LRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNV 414

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +Y  ++ GL +L   ++   +   M   G   ++  Y IL+    +Q         F  M
Sbjct: 415 SYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
                 P+      L+  +     L       ++L       ++ +Y  +INGL KEGL 
Sbjct: 475 QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLL 534

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
            +A      M   G  PD  ++ +++   +  + +SR
Sbjct: 535 DEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESR 571



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 175/433 (40%), Gaps = 43/433 (9%)

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT-SPH 376
           C    +DDA      M+     P    F  ++  + ++G++ ++V  L  +      SP+
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 377 ----NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLG 431
               + L+ C  +  +  LA  +L K+    +     ++   I WLC+  +  +A EL  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            MV     PD  TY+  + G CK+     A  + +++       + ++YS +++   +  
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLC-------------VMR------------ 526
           ++ EA+++F  M   G S    ++N LI GLC              MR            
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 527 ----------KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
                     KV +A  +       G      TY+ +M G        +   +   M+ +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           GC  DV +Y ILI    +  ++ +    FN M+  GL P+  +  +L+HGL     L   
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            +    + ++  + +   Y+IL++G  K+G   +A  L   M      P+   + +L+ +
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 697 --SVGEEIDSRRF 707
               G   D+R+ 
Sbjct: 493 MCKSGNLRDARKL 505


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 171/664 (25%), Positives = 281/664 (42%), Gaps = 54/664 (8%)

Query: 79  ALKIFKWVSIQK------RFQHTADTYCKMILKLGLAGNVEEMEGLCQNM---------- 122
           ALK   WV I+K         H   T   +++K  + G  +       +M          
Sbjct: 39  ALKFLNWV-IKKPNLEINHLTHIISTTTHILVKARMYGYAKTTLSHMLHMDVGFNNVFGA 97

Query: 123 VKERYP--NVREALISLVFSF-VNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           + E YP  N   A+  L+    +    V  A+     M   GF  SV   N+VLG++V++
Sbjct: 98  LMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKD 157

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            R    F   +KEM+   + PNV T N LL  L E  + +SA    R+M + G  P + T
Sbjct: 158 -REVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVT 216

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++       R   +  ++  M   GI  ++  Y  +I  LCR+++  +   + + MR
Sbjct: 217 YNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMR 276

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + P+E+TY  LIN L +  ++  A  + E+M +  L P    +  ++ G C  G  +
Sbjct: 277 KNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIE 336

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPI 414
           E++   +    +   P    + ALL       +F L   +LE+M  D       S+   I
Sbjct: 337 EALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMI 396

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG-------------------KCKL 455
             LC+N  + +A +LL  M+  SV PD  T+S  V G                    CK+
Sbjct: 397 DGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKM 456

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N ++AL  +  ++    V D  + S LV   C+  ++ EA      MS+ G + SS +F
Sbjct: 457 GNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTF 516

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + +I          KA  +     S G   +  TY  ++ GL+      +  + + +   
Sbjct: 517 DCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSS 576

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ--- 632
              A+    Y  ++   S    L +     + MV    VPD  T  SL+ GL    +   
Sbjct: 577 IPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVP 636

Query: 633 -LHLVSSGINK-LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            L L    I K L+S     + +MY  L++GL KEG +  A Y+ + ML +G  PDA   
Sbjct: 637 ALLLSGRAIEKGLLSP----NPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAF 692

Query: 691 GLLV 694
            +L+
Sbjct: 693 NVLL 696



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 121/574 (21%), Positives = 249/574 (43%), Gaps = 21/574 (3%)

Query: 136  SLVFSFVNHYRVNGAMRVLVNMNSGG-----FKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
            +L++++     +  A+     MN  G     F  SV V +      +EE   F D     
Sbjct: 448  TLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVD----- 502

Query: 191  KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
              M + G+ P+  T + +++    +     A   F +M+  G  P+  T+E ++KGL+  
Sbjct: 503  -HMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIG 561

Query: 251  SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              ++++   +     +   +  +FY  ++ +  R   L  A+ L   M   + +PD  TY
Sbjct: 562  GHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTY 621

Query: 311  EELINCLCENLRLDDANDILEDMIVIGL-TPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
              LI  LC   ++  A  +    I  GL +P   ++  +V GL + G    ++   ED  
Sbjct: 622  TSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDML 681

Query: 370  GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
                 P     N LL+     GK      IL  M  R +  +  ++NI +    +   + 
Sbjct: 682  NEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMA 741

Query: 425  KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            +  +L   M++    PD  T+ + +LG CK  + + A++  R+++ +   +D  + + LV
Sbjct: 742  RCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLV 801

Query: 485  EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              LC+  +I  A ++   ++  G + +  ++N L  G       D+A  +      +G +
Sbjct: 802  SKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYA 861

Query: 545  YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             T   +T ++ G+ ++   K  + +  +M + G +    A   +I+ ++   K  +    
Sbjct: 862  PTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRI 921

Query: 605  FNVMVKAGLVPDRETMLSLLHGL-ADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGL 662
              +M++  ++P   T  +L+H    +G+    +   +  ++    V LD + YN+LI+GL
Sbjct: 922  LGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALE--LRSVMEQCHVKLDVAAYNVLISGL 979

Query: 663  WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              +G    A  L + M  +   P+ + + +L+ S
Sbjct: 980  CADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDS 1013



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 112/286 (39%), Gaps = 37/286 (12%)

Query: 118  LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
            L   M+   +   R    SL+  +     ++ A++ L  +   GFK+     NV++  + 
Sbjct: 746  LYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLC 805

Query: 178  EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E       F  V K++   G+ PNVDT N L      T   + A      + + G  P  
Sbjct: 806  ERNEIKMAFDLV-KQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTC 864

Query: 238  RTFEIVIKGL----------------------------------IANSR-VDDSVSILGE 262
            + F  +I+G+                                  +A SR  D++  ILG 
Sbjct: 865  KQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGI 924

Query: 263  MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
            M ++ I   ++ +T ++   C+E  + +A+ L  +M    +  D   Y  LI+ LC +  
Sbjct: 925  MLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGD 984

Query: 323  LDDANDILEDMIVIGLTPTDDVFVDIVRG-LCEVGKFDESVNFLED 367
            +  A  + E+M    + P   +++ ++   LC      ES   L D
Sbjct: 985  IQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRD 1030



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 79/193 (40%)

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C+ + + F++LI        V  A+    L    G S +  T   ++  LVK +      
Sbjct: 105 CNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFW 164

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
               +M+    + +V  + IL+ ++ E+ K K   +    M + G  P   T  +LL+  
Sbjct: 165 SFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWY 224

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               +    S  I+ + S     D   YN+LI+ L ++  +++   +L  M      P+ 
Sbjct: 225 CKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNE 284

Query: 688 TTHGLLVGSSVGE 700
            T+  L+   V E
Sbjct: 285 ITYNTLINGLVKE 297


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 203/443 (45%), Gaps = 5/443 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  EM K  + P+V T N +++  F     E+A+     M  KG  P   T+  V+KGL 
Sbjct: 178 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 237

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +   D +  +  EM D G+  ++  +T +I   CR  ++EEA++++K MR   + PD +
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 297

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           ++  LI       ++D A   L +M   GL P   ++  ++ G C  G   +++   ++ 
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
            G    P    +N LL   C   +   A+ +L +M +R +  D  ++   I   C   ++
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA +L   M+   + PD  TY+  + G C+  + + A  ++  + ++ +  + ++YS L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++  C+  ++ +A      M   G   +  ++N +I G C    V K  +       +  
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           S    TY  ++ G +K  +  D   +L  M  E    DV  Y +LI   S    +++   
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597

Query: 604 FFNVMVKAGLVPDRETMLSLLHG 626
            F  M   G+ PDR T +S+++G
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMING 620



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/494 (22%), Positives = 214/494 (43%), Gaps = 11/494 (2%)

Query: 201 NVDTLNYLLE---VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           N  TLN ++       E +++++ + +   M K+   P+  T  +++         + ++
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISE---MEKRCVFPDVVTHNVMVDARFRAGDAEAAM 211

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
           +++  M   G++  +  Y  ++  LCR    ++A  +FK M    + PD  ++  LI   
Sbjct: 212 ALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGF 271

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
           C    +++A  I ++M   G+ P    F  ++      GK D ++ +L +   +   P  
Sbjct: 272 CRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 331

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +  ++   C AG    A  + ++M     + D  ++N  +  LC+   +  A  LL  
Sbjct: 332 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M    V PD  T++  + G C     + AL++F  +  Q L  D ++Y+ L++G+C+   
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + +A +++  M       +  +++ILI   C   +V+ A        + G      TY  
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           I+ G  +          L +M+V   + D+  Y  LI    +++K+ D     N+M K  
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           + PD  T   L++G +    +        K+ +     D   Y  +ING    G + +A 
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631

Query: 673 YLLDLMLGKGWVPD 686
            L D ML +G+ PD
Sbjct: 632 QLHDEMLQRGFAPD 645



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 180/401 (44%), Gaps = 37/401 (9%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G +EE   + + M   R+  ++  L+S   L+  F    +++ AM  L  M   G     
Sbjct: 275 GEIEEALKIYKEM---RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 331

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
            ++ +V+G         +D + V  EMV  G +P+V T N LL  L +  R+  A     
Sbjct: 332 VIYTMVIGGFCRAGL-MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 390

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M ++G  P+  TF  +I G     ++D ++ +   M +  ++ ++  Y  +I  +CR+ 
Sbjct: 391 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 450

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
            L++A  L+  M + ++ P+ +TY  LI+  CE  +++DA   L++MI  G+ P    + 
Sbjct: 451 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 510

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
            I++G C  G                            + G+ FL K ++ K++     D
Sbjct: 511 SIIKGYCRSGN--------------------------VSKGQKFLQKMMVNKVS----PD 540

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I    + +++  A++LL  M    V PD  TY+  + G     N ++A  +F 
Sbjct: 541 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 600

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           ++ A+ +  D  +Y  ++ G        EA ++   M + G
Sbjct: 601 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 197/483 (40%), Gaps = 5/483 (1%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A D +R +       N+ T  I++         D   +++ EM    +  ++  +  ++ 
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
              R    E A+ L   M +  L P  +TY  ++  LC +   D A ++ ++M   G+ P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC----CNAGKFFLAKCIL 396
               F  ++ G C VG+ +E++   ++       P      C        GK   A   L
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319

Query: 397 EKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M     + D   + + I   C    +  A  +   MV    +PD  TY+  + G CK 
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 379

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               DA  +  ++  + +  D  +++ L+ G C   K+ +A+++F  M          ++
Sbjct: 380 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 439

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI G+C    +DKA  L    +S        TY+ ++    +  + +D    L +M+ 
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 499

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +G   ++  Y  +I+       +     F   M+   + PD  T  +L+HG     ++H 
Sbjct: 500 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 559

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
               +N +  +    D   YN+LING    G   +A ++ + M  KG  PD  T+  ++ 
Sbjct: 560 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 619

Query: 696 SSV 698
             V
Sbjct: 620 GHV 622



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 110/523 (21%), Positives = 218/523 (41%), Gaps = 51/523 (9%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P  R F+++I+    + +  ++      + D  + +  +    ++  L R      A   
Sbjct: 84  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 143

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRG 351
           ++++ + +   +  T   +++  C+ L  D  + ++ +M    + P   T +V VD    
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD---A 200

Query: 352 LCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
               G  + ++  ++       K G VT  +N++L+  C +G +  A  + ++M D  +A
Sbjct: 201 RFRAGDAEAAMALVDSMVSKGLKPGIVT--YNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S+ I I   C   EI +A ++   M    + PD  ++S  +    +    + A+  
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
            R++    LV D + Y+ ++ G C+   +++A+ V   M   GC     ++N L+ GLC 
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLL-----------VVL 570
            R++  A  L +     G      T+T ++ G     KL +A  L            +V 
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 571 AQMLVEGCALDVE---------------------AYCILIQSMSEQNKLKDCALFFNVMV 609
              L++G     +                      Y ILI S  E+ +++D   F + M+
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G++P+  T  S++ G      +      + K++ +    D   YN LI+G  KE    
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS 711
            A  LL++M  +   PD  T+ +L+ G SV   +    + F+ 
Sbjct: 559 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 601



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 4/233 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREAL 134
           L  AL++F  + + +R +    TY  +I  +   G++++   L  +M  +E +PN     
Sbjct: 417 LDKALQLFDTM-LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 475

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
           I L+ S     +V  A   L  M + G   ++  +N ++              F+ K MV
Sbjct: 476 I-LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 534

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
              + P++ T N L+    + +++  A      M K+   P+  T+ ++I G   +  V 
Sbjct: 535 NK-VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 593

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           ++  I  +M   GI+ +   Y  +I         +EA +L   M      PD+
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 242/534 (45%), Gaps = 48/534 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F VV G     +   AD + V  EM   G  P     + +LE    +    +++     M
Sbjct: 115 FPVVRGLCTRGR--IADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
           H KGC  ++    +V+  +     VD++V +L ++   G + ++  Y  ++  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +   L   M  +D  P+ +T+  LI  LC N   +  +++L  M   G TP   ++  I
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G+C+ G  + +   L     Y   P    +N +L+  C+A ++  A+ +L +M  +  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-- 350

Query: 405 ADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
            DC     ++NI + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++
Sbjct: 351 -DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ + + +S+     +++SY+ +++GLC   +  +A E+   M + GC  +  +FN LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC    V++AI L                                   L QMLV GC+ 
Sbjct: 470 FLCKKGLVEQAIEL-----------------------------------LKQMLVNGCSP 494

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ +Y  +I  + +  K ++     NVMV  G+ P+     S+   L+   +++ V    
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +   +   D+ +YN +I+ L K   T +A      M+  G +P+ +T+ +L+
Sbjct: 555 DNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 206/436 (47%), Gaps = 6/436 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A+ +L  +   G +  +  +N VL  +   KR + D   +  EMV+    PN+ T N
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR-WGDVEELMDEMVRVDCAPNIVTFN 255

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L      E   +   +M + GC P+ R +  +I G+     ++ +  IL  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  Y  ++  LC   + +EA  L   M   D   D++T+  L++  C+N  +D  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLEC 382
            ++LE M+  G  P    +  ++ G C+ G  DE+V  L+      C   T  +  +L+ 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C+AG++  A+ ++ +M  +       ++N  I +LC+   + +A ELL +M+V+   PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +YS  + G  K    E+AL +   +  + +  ++I YS +   L +  ++ + +++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            +        +  +N +I  LC   + D+AI   +   S+G     STYT ++ GL    
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 562 RAKDLLVVLAQMLVEG 577
            AK+   +L+++   G
Sbjct: 616 LAKEAQELLSELCSRG 631



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/399 (21%), Positives = 162/399 (40%), Gaps = 40/399 (10%)

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFL 391
           + + P    F  +VRGLC  G+  +++  L++     C  +   ++ +LE  C +G F  
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           +  +LE M  +    D  + N+ +  +CE   + +A  LL ++       D  +Y+A + 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C    + D   +  ++       + ++++ L+  LC+        EV   MS++GC+ 
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD----- 565
               +  +I G+C    ++ A  + +   S G       Y  ++ GL   +R K+     
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 566 ------------------------------LLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                                         ++ +L QML  GC  DV  Y  +I    ++
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             + +  +    M   G  P+  +   +L GL    +       +++++      +   +
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N LIN L K+GL  QA  LL  ML  G  PD  ++  ++
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 118 LCQNMVKERYPNVREALIS------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
            CQN + +R   + E ++S            ++  F     ++ A+ +L +M+S G K +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              + +VL  +    R + D   +  +M++ G  PN  T N L+  L +   +E A++  
Sbjct: 426 TVSYTIVLKGLCSAGR-WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M   GC P+  ++  VI GL    + ++++ +L  M + GI      Y+ I   L RE
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++ + I++F  ++   +  D + Y  +I+ LC+    D A D    M+  G  P +  +
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 346 VDIVRGLCEVGKFDESVNFLEDKC 369
             +++GL   G   E+   L + C
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELC 628



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 3/247 (1%)

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+A V G C+      A R+   V       ++ ++  +V GLC   +I +A+EV   M
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPP---NAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           S  GC+     +++++   C       ++R+    ++ G +  T     ++  + +    
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            + + +L ++   GC  D+ +Y  +++ +    +  D     + MV+    P+  T  +L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  L        V   + ++       D  MY  +I+G+ KEG    A+ +L+ M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 684 VPDATTH 690
            P+   +
Sbjct: 318 KPNVVCY 324


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 239/504 (47%), Gaps = 30/504 (5%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++KEM + G++P++ T N L++ L +  R + A + F  +  KG  P+  ++ I++ G  
Sbjct: 364 MFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYA 423

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R  D  ++   M D GI  +   +  +I    +   ++EA+ +F  MR   + P+ +
Sbjct: 424 TEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVV 483

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG---KFDESVNFL 365
           TY  +I  LC   RL DA + L  MI IGL P   V+  +++G C  G   K  E V+ +
Sbjct: 484 TYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEM 543

Query: 366 EDKCGYVTSPH----NALLECCCNAGKFFLAKCILE---KMADRKIADCDSWNIPIRWLC 418
            D+   +  P+    ++++   CN G+   A+ +      + DR   D  ++N  I   C
Sbjct: 544 MDQG--IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRP--DIFTFNSLIDGYC 599

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
              ++ KA+ +L  MV +   PD  TYS  + G  K    +D L +FR++  + +   ++
Sbjct: 600 LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTV 659

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +YS +++GL +  + + A ++F  M ++G ++S S++ I++ GLC     D+AI L    
Sbjct: 660 TYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKL 719

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            +    +  +    ++  L K++R ++   + A +   G   +   Y ++I ++ ++  +
Sbjct: 720 GAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSV 779

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           ++  + F+ M K G  P                   L++  I  L+   E++ +  Y   
Sbjct: 780 EEADIMFSSMEKTGCAPSSR----------------LLNDIIRMLLQKGEIVKAGYYMSK 823

Query: 659 INGLWKEGLTSQASYLLDLMLGKG 682
           ++G       S  S L+ L   KG
Sbjct: 824 VDGTIISLEASTTSLLISLFASKG 847



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 225/504 (44%), Gaps = 6/504 (1%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+V +   ++  LF    I  A + F  M +KG  PN  T+  ++  L     +D +
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +L +MFD  IQ +   YT +I       + +EA ++FK M    L+PD +T+  L++ 
Sbjct: 327 ELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDS 386

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS 374
           LC++ R  +A +I   +   G  P    +  ++ G    G+F +  N        G V  
Sbjct: 387 LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVAD 446

Query: 375 PH--NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
            H  N L+      G    A  I  +M  + ++ +  ++   I  LC    +  A E L 
Sbjct: 447 SHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLS 506

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY-SKLVEGLCQV 490
           +M+   + P+   Y + + G C   +   A  +  ++  Q +   +I++ S ++  LC  
Sbjct: 507 QMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNE 566

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++  A +VF  +   G      +FN LI G C++ K+DKA  +     S+GT     TY
Sbjct: 567 GRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTY 626

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + ++ G  K  R  D L++  +ML +        Y +++  +    +       F+ M++
Sbjct: 627 STLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           +G      T   +L GL   +      +  +KL + +   + ++ N +I+ L+K     +
Sbjct: 687 SGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREE 746

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A  L   +   G VP+A+T+G+++
Sbjct: 747 AHDLFASVSASGLVPNASTYGVMI 770



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/475 (21%), Positives = 196/475 (41%), Gaps = 53/475 (11%)

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA- 326
           + L +  Y  ++   CR  + +     F  +    L  D +     + CLC   R D+A 
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEAL 220

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----------EDKCGYVTSPH 376
           + +L  M  +G  P    +  +++ LC   +  E+++ L           D   Y    H
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280

Query: 377 NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
              +E     G+   A  +  +M  +  + +  ++N  +  LC+   + KA  +L +M  
Sbjct: 281 GLFME-----GEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFD 335

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           +S+ PD  TY+A + G   L  +++A ++F++++ + L+ D ++++ L++ LC+ ++  E
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKE 395

Query: 496 AVEV-----------------------------------FCCMSKNGCSLSSSSFNILIY 520
           A E+                                   F  M+ NG    S  FNILI 
Sbjct: 396 AAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
                  +D+A+ + +     G S    TY  ++  L ++ R  D +  L+QM+  G   
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV-PDRETMLSLLHGLADGSQLHLVSSG 639
           +   Y  LIQ       L       + M+  G+  P+     S++H L +  ++      
Sbjct: 516 NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            N ++   +  D   +N LI+G    G   +A  +LD M+  G  PD  T+  L+
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI 630



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 3/324 (0%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRM 433
           +  L++CCC A +  L      ++    +  D    N  ++ LC  +   +A   LL RM
Sbjct: 168 YGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRM 227

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDAL-RVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
                VPD  +Y+  +   C     ++AL  + R         D +SY+ ++ GL    +
Sbjct: 228 SELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGE 287

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I++A  +F  M + G   +  ++N +++ LC  R +DKA  +    + +       TYT 
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G   L R K+   +  +M  EG   D+  +  L+ S+ +  + K+ A  F+ +   G
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             PD  +   LLHG A   +   +++  + +  +  V DS  +NILIN   K G+  +A 
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467

Query: 673 YLLDLMLGKGWVPDATTHGLLVGS 696
            +   M G+G  P+  T+  ++ +
Sbjct: 468 LIFTEMRGQGVSPNVVTYATVIAA 491



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 114/229 (49%), Gaps = 1/229 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +++ A  VL  M S G +  V  ++ ++    +  R   D + +++EM+   + P   T 
Sbjct: 603 KMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR-IDDGLILFREMLCKRVKPTTVTY 661

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + +L+ LF   R  +A   F  M + G   +  T+ I+++GL  N+  D+++++  ++  
Sbjct: 662 SLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGA 721

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           + ++ E++    +I  L +  + EEA  LF  + A  L+P+  TY  +I  L +   +++
Sbjct: 722 MNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEE 781

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           A+ +   M   G  P+  +  DI+R L + G+  ++  ++    G + S
Sbjct: 782 ADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIIS 830



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/206 (19%), Positives = 86/206 (41%), Gaps = 1/206 (0%)

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG 149
           KR + T  TY  ++  L  AG     + +   M++            ++     +   + 
Sbjct: 652 KRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDE 711

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ +   + +   K  + + N ++ A+ + KR   +   ++  +  +G+VPN  T   ++
Sbjct: 712 AITLFHKLGAMNLKFEIAILNTMIHALYKVKRR-EEAHDLFASVSASGLVPNASTYGVMI 770

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +   +E A   F  M K GC P+SR    +I+ L+    +  +   + ++    I 
Sbjct: 771 INLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIIS 830

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLF 295
           LE S  + +I +   + +  E I+  
Sbjct: 831 LEASTTSLLISLFASKGRYREQIKFL 856


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 215/453 (47%), Gaps = 10/453 (2%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS-IQKRFQ 93
           + S++ ++KS+  T     I+     LSP  ++ ++    +L  AL+IF       + F 
Sbjct: 76  VDSKSTLLKSYTVT---PPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFA 132

Query: 94  HTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV 153
           H  +TY  MI KL  A   E ME L   + K +        I+++ ++    R   A+R 
Sbjct: 133 HNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRT 192

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVL 212
            + + S G + SV  FN +L  +V+ KR F     ++K   K  GIVPNV T N L++ L
Sbjct: 193 FLRIPSFGLQPSVRSFNTLLNTLVQNKR-FDLVHLMFKNCRKKFGIVPNVFTCNILVKAL 251

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            + N I++A+     M   G  PN  T+  ++ G ++   +  +  + GE+ D G   + 
Sbjct: 252 CKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDP 311

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + YT ++   C++ +  +A+++   M    + P+++TY  +I   C+  +  +  ++L+D
Sbjct: 312 TTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD 371

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGK 388
           M+     P+  +   ++  LCE GK + +    +       +P NA    L+   C  GK
Sbjct: 372 MLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGK 431

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
            + A+ + ++     I    ++N  I  +CE  E+ +A  L   MV    VP+  TY+  
Sbjct: 432 VWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           + G CK+ N  + +RV  ++     + +  +Y+
Sbjct: 492 IKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 85/393 (21%), Positives = 169/393 (43%), Gaps = 7/393 (1%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N +T   ++E L +    E       ++HK         F  VI+      R   ++   
Sbjct: 134 NYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTF 193

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA-LDLMPDELTYEELINCLCE 319
             +   G+Q  +  +  ++  L +  + +    +FK  R    ++P+  T   L+  LC+
Sbjct: 194 LRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCK 253

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP-- 375
              +D A  +LE+M  +G  P    +  I+ G    G    +     +    G+V  P  
Sbjct: 254 KNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTT 313

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMV 434
           +  L++  C  G+F  A  ++++M + ++   D ++ + I   C+ ++  +   LL  M+
Sbjct: 314 YTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDML 373

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
               +P  A     +   C+    E A  +++++  ++   D+   S L+  LC+  K+ 
Sbjct: 374 EKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVW 433

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA ++F    K G   S+ ++N LI G+C   ++ +A RL       G      TY  ++
Sbjct: 434 EARKLFDEFEK-GSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLI 492

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
            G  K+  A++ + V+ +ML  GC  +   Y I
Sbjct: 493 KGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/425 (19%), Positives = 184/425 (43%), Gaps = 13/425 (3%)

Query: 278 IIPMLCRENKLEEAIRLF----KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           ++ M+ R+  L+ A+++F    K  R  +   +  TY  +I  L +    +    ++  +
Sbjct: 104 VVSMISRQQNLDLALQIFDHAGKFHR--NFAHNYETYLAMIEKLSKARAFEPMETLISQL 161

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
               +   +++F+ ++R     G+   ++        +   P     N LL       +F
Sbjct: 162 HKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF 221

Query: 390 FLAKCILEKMADR--KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
            L   + +    +   + +  + NI ++ LC+  +I  A  +L  M     +P+  TY+ 
Sbjct: 222 DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTT 281

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G     +   A RVF ++  +  V D  +Y+ L++G C+  +  +AV+V   M +N 
Sbjct: 282 ILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENR 341

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              +  ++ ++I   C  +K  + + L           +++   +++  L +  + +   
Sbjct: 342 VEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVAC 401

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  ++L + C  D      LI  + ++ K+ +    F+   K G +P   T  +L+ G+
Sbjct: 402 ELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEK-GSIPSTLTYNALIAGM 460

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
            +G +L   +   + +V    V ++  YN+LI G  K G   +   +++ ML  G +P+ 
Sbjct: 461 CEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNK 520

Query: 688 TTHGL 692
            T+ +
Sbjct: 521 ATYAI 525


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 249/562 (44%), Gaps = 43/562 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V    I ++  F    RV+ A+ +   M    F   +  FN +L +  + K  ++  V
Sbjct: 271 PDVHSYNI-MINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKH-YSTAV 327

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +   +   GI P++ TLN L+       +I        ++ K+G  P++ T   +IKGL
Sbjct: 328 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGL 387

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               +V  ++    ++   G QL    Y  +I  +C+      AI+L + +      P+ 
Sbjct: 388 CLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNV 447

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
             Y  +I+ LC+   + +A  +  +M V G++     +  ++ G C VGK  E++  L +
Sbjct: 448 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNE 507

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 +P    +  L++     GK   AK +L  M    +  D  ++N  +       E
Sbjct: 508 MVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYE 567

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           ++KA  +   M +  V PD  TY+  + G CK    ++AL +F+++  +++V D+++YS 
Sbjct: 568 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSS 627

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           LV+GLC+  +I+   ++   M   G      ++N LI GLC    +DKAI L +     G
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
               T T+T ++ GL K  R KD   V   +L +G  LDV  Y ++I    +Q  L++  
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
              + M + G +P+  T                                   ++I+IN L
Sbjct: 748 TMLSKMEENGCIPNAVT-----------------------------------FDIIINAL 772

Query: 663 WKEGLTSQASYLLDLMLGKGWV 684
           +K+    +A  LL  M+ +G +
Sbjct: 773 FKKDENDKAEKLLRQMIARGLL 794



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 259/606 (42%), Gaps = 52/606 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L++ F    ++  A+ +L  M       +V  +N+++ A+ +E +   +   V   M+K
Sbjct: 173 TLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK-VKEAKSVLAVMLK 231

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           A +  NV T + L++  F    ++ A   F  M   G  P+  ++ I+I G     RVD 
Sbjct: 232 ACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDK 291

Query: 256 SVSILGEM----FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++++  EM    F   IQ     +  I+    +      A+ L   +    + PD  T  
Sbjct: 292 ALNLFKEMILSRFPPIIQ-----FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC-- 369
            LINC C   ++     +L  ++  G  P+      +++GLC  G+  ++++F  DK   
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHF-HDKLLA 405

Query: 370 -GYVTS--PHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRK 425
            G+  +   +  L+   C  G    A  +L K+  R    + + ++  I  LC+ + + +
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AY L   M V  +  D  TYS  + G C +   ++A+ +  ++  +++  D  +Y+ LV+
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525

Query: 486 GLCQVEKITEA-----------------------------------VEVFCCMSKNGCSL 510
            L +  K+ EA                                     VF  MS  G + 
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTP 585

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              ++ ILI G C  + VD+A+ L    +       T TY+ ++ GL K  R   +  ++
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G   DV  Y  LI  + +   L      FN M   G+ P+  T   LL GL  G
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L         L++    LD  +YN++I G  K+GL  +A  +L  M   G +P+A T 
Sbjct: 706 GRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTF 765

Query: 691 GLLVGS 696
            +++ +
Sbjct: 766 DIIINA 771



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 223/499 (44%), Gaps = 4/499 (0%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV+  N +++ L +   +  A   F  M  KG   N  T+  +I G     ++ +++ +
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L  M    I   +  Y  ++  LC+E K++EA  +  +M    +  + +TY  L++    
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---H 376
              +  A  +   M ++G+TP    +  ++ G C++ + D+++N  ++       P    
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N +L+       +  A  +  ++  + I  D  + NI I   C   +I   + +L +++ 
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               P   T +  + G C     + AL    ++ AQ   L+ +SY+ L+ G+C++     
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+++   +       +   ++ +I  LC  + V +A  L S     G S    TY+ ++ 
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G   + + K+ + +L +M+++    DV  Y IL+ ++ ++ K+K+      VM+KA + P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  +L++G     ++       N +       D   Y ILING  K  +  +A  L 
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 676 DLMLGKGWVPDATTHGLLV 694
             M  K  VPD  T+  LV
Sbjct: 611 KEMHQKNMVPDTVTYSSLV 629



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 120/541 (22%), Positives = 230/541 (42%), Gaps = 40/541 (7%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           +L    ++ K+G  P++ T   +IKGL    +V +++    ++   G QL    Y  +I 
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            +CR      AI+  + +      P+   Y  +I+ LC+   + +A  +  +M V G++ 
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  ++ G C VGK  E++  L        +P    +N L++  C  GK   AK +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             M    + ++  +++  +       E++KA  +   M +  V PD  +Y+  + G CK+
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 456 CNYEDALRVFRQVSAQSL--------VLDSISYSK------------------------- 482
              + AL +F+++             +LDS +  K                         
Sbjct: 287 KRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346

Query: 483 -LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+   C + +IT    V   + K G   S+ + N LI GLC+  +V KA+       + 
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      +Y  ++ G+ K+   +  + +L ++       +VE Y  +I ++ +   + + 
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ M   G+  D  T  +L++G     +L      +N++V  +   D   Y IL++ 
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSFPDSVSD 720
           L KEG   +A  +L +ML     PD  T+  L+ G  +  E+   +  F++ S      D
Sbjct: 527 LGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPD 586

Query: 721 I 721
           +
Sbjct: 587 V 587



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 125/282 (44%)

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + DCDS    +    +N +   +  +L +++     PD  T +  + G C     ++AL 
Sbjct: 25  LKDCDSPPFFLPPSIQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALH 84

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
              ++ AQ   L+ +SY+ L+ G+C++     A++    +       +   +N +I  LC
Sbjct: 85  FHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALC 144

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             + V +A  L S     G S    TY+ ++ G   + + K+ L +L  M+++    +V 
Sbjct: 145 KYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVC 204

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y IL+ ++ ++ K+K+      VM+KA +  +  T  +L+ G     ++       N +
Sbjct: 205 TYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                  D   YNI+ING  K     +A  L   M+   + P
Sbjct: 265 SLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 260/563 (46%), Gaps = 25/563 (4%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY-KEMVK 195
           LV ++V   +V  A   +  M+  GFK S+   N +L A+V   +  +++V+++ KE + 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINK--SEYVWLFLKESLD 223

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVD 254
                +V T N +L  L    ++  A    ++M  K C  PN+ T+  ++   +   R  
Sbjct: 224 RKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCK 281

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ IL +M   GI+ +L  Y  +I  LC+  +   A  L K MR ++L PDE +Y  LI
Sbjct: 282 SALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLI 341

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +      +++ A  I   M+   L P+   +  ++ G C  G+ DE+   L +       
Sbjct: 342 HGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVR 401

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR--WLCENEEIRKAYELLGR 432
           P         +  K  L KC+L   AD    D  +++  I    + E E+ +   + + R
Sbjct: 402 PREV------SKAKQIL-KCML---ADGIDPDVITYSALINEGMIAEAEQFK---QYMSR 448

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M +S    D A+++  +   C+  N  +A  V+  +       D  +Y  L+ GLCQ   
Sbjct: 449 MKISF---DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGH 505

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + +A E    + +  C++   + N L+ G+C    +D+A+ L     +      T TYT 
Sbjct: 506 LVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTI 565

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN-VMVKA 611
           ++ G  K  +    L++L  ML +G   D  AY  L+  +  + ++K  +  F  ++ K 
Sbjct: 566 LLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 625

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           GL  D     S+++G   G Q++ +   +  +  +     S+ YNIL++G  K+G  S+ 
Sbjct: 626 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 685

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
            YL   M+ +G  PD  T+ LL+
Sbjct: 686 LYLYRDMVKEGIKPDNVTYRLLI 708



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 145/620 (23%), Positives = 273/620 (44%), Gaps = 25/620 (4%)

Query: 98  TYCKMILK-LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T C ++L  L   G + + E + Q M   R PN      +++  +V   R   A+R+L +
Sbjct: 231 TTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNA-VTYNTILNWYVKKGRCKSALRILDD 289

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G +  +  +N+++  + + KR    ++ + K M +  + P+  + N L+   F   
Sbjct: 290 MEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL-KRMREVNLTPDECSYNTLIHGFFGEG 348

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ------- 269
           +I  A+  F +M ++   P+  T+  +I G   N R D++  +L EM   G++       
Sbjct: 349 KINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKA 408

Query: 270 ---LELSFYTCIIP------MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
              L+      I P       L  E  + EA +  + M  + +  D  ++  +I+  C+ 
Sbjct: 409 KQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 468

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPH 376
             + +A  + ++M+  G  P    +  ++RGLC+ G   ++  F    LE  C       
Sbjct: 469 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 528

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N LL   C  G    A  + EKM  R I  D  ++ I +   C+  ++  A  LL  M+ 
Sbjct: 529 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 588

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEGLCQVEKIT 494
             +VPD   Y+  + G       + A  +F+++   + L  D I+Y+ ++ G  +  +I 
Sbjct: 589 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 648

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           E   +   M +N    SS+S+NIL++G     ++ + + L       G      TY  ++
Sbjct: 649 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 708

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL +    +  +  L +M++EG   D  A+ ILI++ SE++K+ +    F+ M    + 
Sbjct: 709 FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMS 768

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P  +T +++++GL   + L      ++ +V        + Y  LIN   + G    A  L
Sbjct: 769 PSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFEL 828

Query: 675 LDLMLGKGWVPDATTHGLLV 694
            + M   G VP       +V
Sbjct: 829 KEDMKALGVVPSEVAESSIV 848



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/539 (22%), Positives = 229/539 (42%), Gaps = 16/539 (2%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           F    D+YC+        GNV E   +  NMV+  +P       SL+        +  A 
Sbjct: 458 FNCIIDSYCQ-------RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 510

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLE 210
             +V +      +     N +L  I   K G  D    + ++MV   I+P+  T   LL+
Sbjct: 511 EFMVYLLEKACAIDEKTLNTLLVGIC--KHGTLDEALDLCEKMVTRNILPDTYTYTILLD 568

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQ 269
              +  ++  AL   + M +KG  P++  +  ++ GL+   +V  +  +  E+    G+ 
Sbjct: 569 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 628

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            +   Y  ++    +  ++ E  RL + M   ++ P   +Y  L++   +  +L     +
Sbjct: 629 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 688

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCN 385
             DM+  G+ P +  +  ++ GLCE G  + +V FLE        P N     L++    
Sbjct: 689 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 748

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             K   A  +   M    ++      +  +  L     ++++YE+L  MV S + P    
Sbjct: 749 KSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTH 808

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y A +  KC++ + + A  +   + A  +V   ++ S +V GLC+  K+ EA+ VF  + 
Sbjct: 809 YIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIM 868

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           + G   + ++F  L++GLC   K+D A  L+ L  S G      TY  ++ GL   +   
Sbjct: 869 RAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCIC 928

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           D L +  +M  +G   ++  Y  L  +M     ++D       +   G+VP  +   SL
Sbjct: 929 DALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL 987



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 117/543 (21%), Positives = 228/543 (41%), Gaps = 44/543 (8%)

Query: 162 FKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
            K+S DV  FN ++ +  +       F  VY  MV+ G  P++ T   LL  L +   + 
Sbjct: 449 MKISFDVASFNCIIDSYCQRGNVLEAFS-VYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 507

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A +    + +K C  + +T   ++ G+  +  +D+++ +  +M    I  +   YT ++
Sbjct: 508 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 567

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI-GL 338
              C+  K+  A+ L +MM    L+PD + Y  L+N L    ++  A+ + +++I   GL
Sbjct: 568 DGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGL 627

Query: 339 TPTDDVFVDIVRGLCEVGKFDE----SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
                 +  ++ G  + G+ +E      N  E++    ++ +N L+      G+      
Sbjct: 628 YADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 687

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +   M    I  D  ++ + I  LCE   I  A + L +MV+  V PD   +   +    
Sbjct: 688 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFS 747

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           +     +AL++F  +    +   S +Y  +V GL +   + ++ E+   M ++G     +
Sbjct: 748 EKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHT 807

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            +  LI   C +  +D A  L+    + G   +    + I+ GL K  + ++ ++V + +
Sbjct: 808 HYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 867

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           +                                   +AG+VP   T  +L+HGL    ++
Sbjct: 868 M-----------------------------------RAGMVPTIATFTTLMHGLCKEFKI 892

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                    + S    +D   YN+LI GL  +     A  L + M  KG +P+ TT+  L
Sbjct: 893 DDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 952

Query: 694 VGS 696
            G+
Sbjct: 953 TGA 955



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 158/388 (40%), Gaps = 56/388 (14%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           N +L   C  GK   A+ +L+KM + ++ +  ++N  + W  +    + A  +L  M  +
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKN 293

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            +  D  TY+  +   CKL     A  + +++   +L  D  SY+ L+ G     KI  A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           + +F  M +     S +++  LI G C   + D+A R+      +G      +  K +L 
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILK 413

Query: 557 LVKLQRAKDLLVVLAQMLVEG----------------CALDVEAYCILIQSMSEQNKLKD 600
            +        ++  + ++ EG                 + DV ++  +I S  ++  + +
Sbjct: 414 CMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLE 473

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS---------------------- 638
               ++ MV+ G  PD  T  SLL GL  G   HLV +                      
Sbjct: 474 AFSVYDNMVRHGWPPDICTYGSLLRGLCQGG--HLVQAKEFMVYLLEKACAIDEKTLNTL 531

Query: 639 --GI-------------NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
             GI              K+V+ + + D+  Y IL++G  K G    A  LL +ML KG 
Sbjct: 532 LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL 591

Query: 684 VPDATTHGLLVGSSVGE-EIDSRRFAFD 710
           VPD   +  L+   V E ++ +  + F 
Sbjct: 592 VPDTIAYTCLLNGLVNEGQVKAASYMFQ 619


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 227/464 (48%), Gaps = 6/464 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +LG++++ K+ +   + + ++M   GI P+  T N L+    +   I+ +   F ++
Sbjct: 61  FGKILGSLLKAKQ-YQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKI 119

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            KKG  P++ TF I+IKGL     V  ++    ++   G QL+   Y  +I  LCR  + 
Sbjct: 120 LKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGET 179

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + A++L + +    + P+ + Y  +I+ +C++  ++DA D+  +M+   ++P    +  +
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL 239

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C VGK   +V+          +P+    + L++  C  GK   AK +L  M  + +
Sbjct: 240 ISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV 299

Query: 405 A-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N  +   C  +++ KA  L   M    V PD  +YS  + G CK+   ++A++
Sbjct: 300 KLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMK 359

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  + +  + ++Y+ LV+GLC+  + + A+E+   M   G   +  ++N ++  +C
Sbjct: 360 LFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAIC 419

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               VDKAI L +     G      TYT ++ GL K+ R  D   V   +LV+G + ++ 
Sbjct: 420 KNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIY 479

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            Y  LI     +    +     + M   G +P+  T   L+H L
Sbjct: 480 TYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL 523



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 218/478 (45%), Gaps = 9/478 (1%)

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC-- 283
           R +HK    P +  F  ++  L+   +   ++S+  +M   GI+ +  F TC + M C  
Sbjct: 47  RLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPD--FITCNLLMNCFS 104

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +   ++ +  +F  +      PD +T+  LI  LC    +  A    + ++  G      
Sbjct: 105 QLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQV 164

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
            +  ++ GLC VG+   +V  L    G +  P    ++ +++  C       A  +  +M
Sbjct: 165 SYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEM 224

Query: 400 ADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             ++I+ D  +++  I   C   +++ A +L  RM+  ++ P+  T+S  + G CK    
Sbjct: 225 VSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKV 284

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +A  V   +  +++ LD ++Y+ L++G C V+++ +A  +F  M++ G +    S++I+
Sbjct: 285 REAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIM 344

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C ++ VD+A++L    +         TY  ++ GL K  R    L ++ +M   G 
Sbjct: 345 INGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQ 404

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             ++  Y  ++ ++ + N +    +    + + G+ PD  T   L++GL    +L     
Sbjct: 405 PSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQK 464

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               L+      +   Y  LING   +G   +   +L  M   G +P+A T+ +L+ S
Sbjct: 465 VFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHS 522



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 37/355 (10%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYR 146
           + KR      TY  +I    + G ++    L   M+ +   PNV    I L+  F    +
Sbjct: 225 VSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSI-LIDGFCKEGK 283

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           V  A  VL  M     KL V  +N ++ G  + ++   A  +F    M + G+ P+V + 
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF--NVMAQRGVTPDVWSY 341

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++    +   ++ A+  F  MH K   PN  T+  ++ GL  + R   ++ ++ EM D
Sbjct: 342 SIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHD 401

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G    +  Y  I+  +C+ N +++AI L   ++   + PD  TY  LIN LC+  RLDD
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A  + ED++V G +P    +  ++ G C  G FDE +                       
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGL----------------------- 498

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                    +L KM D   I +  ++ I I  L E +E  KA +LL  M+   ++
Sbjct: 499 --------AMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%)

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           + KI+  L+K ++ +  L +  QM   G   D     +L+   S+   +K     F  ++
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G  PD  T   L+ GL    ++H      +K+V+    LD   Y  LINGL + G T 
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETK 180

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRF 707
            A  LL  + GK   P+   +  ++ S   +++ +  F
Sbjct: 181 AAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 254/548 (46%), Gaps = 19/548 (3%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           + GA  ++  M S     +V  +N +L   V++ R F   + V ++M K G+  +V T N
Sbjct: 241 LKGAKHMIHKMKSCSLP-NVITYNTILHWYVKKGR-FKAAMCVLEDMEKNGVEADVYTYN 298

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            +++ L +  R   A    +RM      P+  T+  +IKG    S++  ++ I  EM   
Sbjct: 299 IMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQ 358

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  L+ YT +I   CR   ++EA+R+   M+   + P E+TY  ++N       + +A
Sbjct: 359 GLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEA 413

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH-------NAL 379
             + ++M   G +P    + +++RGLC+ G   ++  F+   C  V  P        NAL
Sbjct: 414 FSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMS--C-IVHIPSAIDQKTLNAL 470

Query: 380 LECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           L   CN G    A  + EKM     I D  ++ I +   C   +I  A  LL  M+   +
Sbjct: 471 LLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGL 530

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           VPD  TY+  + G  K    + A  +F++ +  + +  D I+Y+ ++ G  +  K+ +  
Sbjct: 531 VPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVE 590

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
                M++N    + +S+NIL++G      + ++I L       G   T  TY  ++LGL
Sbjct: 591 MTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGL 650

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K    +  +  L +M++EG   D  ++ +LI + SE++++ D    FN M    + P  
Sbjct: 651 SKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSS 710

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           +T  ++++GL   + L      +  +V        + Y  LIN   + G  + A  L + 
Sbjct: 711 KTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEE 770

Query: 678 MLGKGWVP 685
           M   G VP
Sbjct: 771 MTALGIVP 778



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 130/561 (23%), Positives = 242/561 (43%), Gaps = 7/561 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV ++V   RV  A   ++ M++ GFK S    N VL A+VE       + F+ + +V+ 
Sbjct: 161 LVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRK 220

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVDD 255
             + +V T N +L  +     ++ A     +M  K C  PN  T+  ++   +   R   
Sbjct: 221 FPL-DVTTCNIVLNSMCIEGNLKGAKHMIHKM--KSCSLPNVITYNTILHWYVKKGRFKA 277

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L +M   G++ ++  Y  +I  LC+  +   A  L K MR  +L PDE TY  LI 
Sbjct: 278 AMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIK 337

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
              +  ++  A  I  +M+  GL P+   +  ++ G C  G  DE++  L +       P
Sbjct: 338 GFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKP 397

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                    N G    A  + + M     + D  ++   +R LC+   + +A E +  +V
Sbjct: 398 SEVTYSAMLN-GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIV 456

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                 D  T +A +LG C   + ++AL +  ++   + + D  +Y+ L+ G C+  KI 
Sbjct: 457 HIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIV 516

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKI 553
            AV +   M + G      ++  L+ GL    +V  A  L + +    G       Y  +
Sbjct: 517 PAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSM 576

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           M G +K  +   + + +  M       +  +Y IL+    ++  L      +  MV+ G+
Sbjct: 577 MNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGI 636

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P   T   L+ GL+    + +    ++K+V +    D   +++LIN   ++   S A  
Sbjct: 637 KPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQ 696

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           L + M      P + T+  ++
Sbjct: 697 LFNCMKWLYMSPSSKTYSAMI 717



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 141/677 (20%), Positives = 279/677 (41%), Gaps = 80/677 (11%)

Query: 98  TYCKMILK-LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T C ++L  + + GN++  + +   M     PNV     +++  +V   R   AM VL +
Sbjct: 226 TTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVI-TYNTILHWYVKKGRFKAAMCVLED 284

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKR----------------------------GFAD--- 185
           M   G +  V  +N+++  + + KR                            GF D   
Sbjct: 285 MEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESK 344

Query: 186 ---FVFVYKEMVKAGIVPNVDTLNYL-------------LEVLFE--------------- 214
               + ++ EM++ G+ P++ T   L             L VL+E               
Sbjct: 345 MMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSA 404

Query: 215 --TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
                +  A   +  M K GC P+  T+  +++GL     +  +   +  +  +   ++ 
Sbjct: 405 MLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQ 464

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
                ++  +C    L+EA+ L + M  ++ +PD  TY  L++  C   ++  A  +L+ 
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQM 524

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---KCGYVTS--PHNALLECCCNAG 387
           M+  GL P    +  +++GL + G+   +    ++   K G       +N+++     AG
Sbjct: 525 MLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAG 584

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           K    +  +  M   K+  +  S+NI +    +   + ++  L   MV   + P   TY 
Sbjct: 585 KLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYR 644

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             +LG  K    E A++   ++  + +  D +S+  L+    +  ++++A+++F CM   
Sbjct: 645 LLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWL 704

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
             S SS +++ +I GL     +  +  +      SG     + Y  ++    +       
Sbjct: 705 YMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGA 764

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             +  +M   G      A   +++ +S+  K+++  + F  +++AG+VP   T  +L+HG
Sbjct: 765 FRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHG 824

Query: 627 LADGSQ----LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L   ++    LHL S     + S    +D   YN+LI GL K    S A  L + M  KG
Sbjct: 825 LCKEAKISDALHLKSL----MESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKG 880

Query: 683 WVPDATTHGLLVGSSVG 699
             P+ TT+  L  +  G
Sbjct: 881 LRPNVTTYTTLTEAIYG 897



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/556 (22%), Positives = 233/556 (41%), Gaps = 82/556 (14%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE---------KRGFADF 186
           +L+  +  +  ++ A+RVL  M   G K S   ++ +L   V E         K G +  
Sbjct: 369 TLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPD 428

Query: 187 VFVYKEMVKA------------------GIVPNVD--TLNYLLEVLFETNRIESALDQFR 226
           V+ Y+ +++                    I   +D  TLN LL  +     ++ ALD   
Sbjct: 429 VYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCE 488

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M      P+  T+ I++ G     ++  +V +L  M + G+  ++  YTC++  L +E 
Sbjct: 489 KMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEG 548

Query: 287 KLEEAIRLFK-----------------MMRAL-------------------DLMPDELTY 310
           +++ A  LF+                 MM                       + P+  +Y
Sbjct: 549 QVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASY 608

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             L++   +   L  +  + +DM+  G+ PT+  +  ++ GL + G  + +V FL+    
Sbjct: 609 NILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVL 668

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSW----------NIPIRWLCE 419
               P     +   NA   F  K    +M+D  ++ +C  W          +  I  L  
Sbjct: 669 EGIYPDRLSFDVLINA---FSEK---SRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIR 722

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              ++ + ++L  MV S + P    Y A +  KC+  +   A R+  +++A  +V   ++
Sbjct: 723 KNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVA 782

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            S +V GL +  K+ E + VFC + + G   + ++F  L++GLC   K+  A+ L+SL  
Sbjct: 783 DSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLME 842

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S G      TY  ++ GL K+Q   D L +  +M  +G   +V  Y  L +++    +  
Sbjct: 843 SCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTL 902

Query: 600 DCALFFNVMVKAGLVP 615
           +     N +   GLVP
Sbjct: 903 EGEKLLNDIEDRGLVP 918



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 182/410 (44%), Gaps = 10/410 (2%)

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + L ++ L+N   +  R+ DA+  +  M   G   +      ++  L E+G+      FL
Sbjct: 154 NPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFL 213

Query: 366 ED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
           ++    K     +  N +L   C  G    AK ++ KM    + +  ++N  + W  +  
Sbjct: 214 KEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVITYNTILHWYVKKG 273

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
             + A  +L  M  + V  D  TY+  +   CK+     A  + +++   +L  D  +Y+
Sbjct: 274 RFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYN 333

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L++G     K+  A+ +F  M + G   S +++  LI G C    +D+A+R+      +
Sbjct: 334 TLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVA 393

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G   +  TY+ ++ G V      +   V   M   GC+ DV  Y  L++ + +   L   
Sbjct: 394 GVKPSEVTYSAMLNGSV-----HEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQA 448

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
             F + +V      D++T+ +LL G+ +   L        K+V+ + + D   Y IL++G
Sbjct: 449 KEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSG 508

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFD 710
             ++G    A  LL +ML KG VPD  T+  L+   + E ++ +  + F 
Sbjct: 509 FCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQ 558



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 4/293 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREAL 134
           LS ++ ++K + ++K  + T  TY  +IL L   G +E        MV E  YP+ R + 
Sbjct: 621 LSRSIYLYKDM-VRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPD-RLSF 678

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
             L+ +F    R++ A+++   M       S   ++ ++  ++  K        V ++MV
Sbjct: 679 DVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIR-KNWLQHSCDVLRDMV 737

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           ++G+ P       L+        I  A      M   G  P       +++GL    +V+
Sbjct: 738 ESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVE 797

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           + + +   +   G+   ++ +T ++  LC+E K+ +A+ L  +M +  L  D +TY  LI
Sbjct: 798 EGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLI 857

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
             LC+   + DA ++ E+M   GL P    +  +   +   G+  E    L D
Sbjct: 858 TGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLND 910



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 3/170 (1%)

Query: 175 AIVEEKRGFADFVFVYK---EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           A++  K  F D    ++   EM   GIVP     + ++  L +  ++E  +  F  + + 
Sbjct: 750 ALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRA 809

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P   TF  ++ GL   +++ D++ +   M   G+++++  Y  +I  LC+   + +A
Sbjct: 810 GMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDA 869

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           + L++ M++  L P+  TY  L   +    R  +   +L D+   GL P+
Sbjct: 870 LELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 141/642 (21%), Positives = 292/642 (45%), Gaps = 20/642 (3%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + S   +LSP  +I++L +  +  SAL IF  V+    + HT   +  ++ +L     V 
Sbjct: 1   MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVV 172
            +  + + +  ++     +  ++++ ++  +   + A+ +   M+   G +  +  +N +
Sbjct: 61  HVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 120

Query: 173 LGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           L A++E  K   A+  F+Y E +  G+ PN+ T N L+++     + + A +    M ++
Sbjct: 121 LNALIESNKWDEAESFFLYFETM--GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQ 178

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+  ++  +I  L  N  + D++ +  EM + G+  +++ Y  +I    ++  +  A
Sbjct: 179 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 238

Query: 292 IRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
             ++ ++++   + P+  +Y  +IN LC+  + D++ +I   M           +  ++ 
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 298

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC-----ILEKMAD 401
           GLC  G  D +    ++      SP    +N +L     AG+  + +C     ++EK   
Sbjct: 299 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR--IEECLELWKVMEKEGC 356

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           R +    S+NI IR L EN ++ +A  +   +       D  TY   V G CK      A
Sbjct: 357 RTVV---SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           L +  +       LD+ +YS ++ GLC+  ++ E   V   M+K+GC  +    N +I G
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                K++ A+R      S G   T  TY  ++ GL K +R  +   ++ +ML +G   +
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  Y +L+  + +  KL      +   ++ G  PD +    ++HGL    ++       +
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           ++     V +   +N L+ G +K     +AS + D +L + W
Sbjct: 594 EMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL-QSW 634



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 223/483 (46%), Gaps = 8/483 (1%)

Query: 219 ESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + ALD F+RMH+  GC P  R++  ++  LI +++ D++ S       +G+   L  Y  
Sbjct: 95  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 154

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I + CR+ + ++A  L   M      PD  +Y  LIN L +N  + DA  + ++M   G
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSP-HNALLECCCNAGKFFLA 392
           +TP    +  ++ G  + G    +       L+    Y   P +N ++   C  GKF  +
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274

Query: 393 KCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             I  +M  + +  D  +++  I  LC +  +  A  +   M  + V PD   Y+  + G
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             +    E+ L +++ +  +      +SY+ L+ GL +  K+ EA+ ++  + +  C   
Sbjct: 335 YLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 393

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           S ++ +L++GLC    ++KA+ +   A +      T  Y+ ++ GL +  R  ++  VL 
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           QM   GC  +      +I      +KL+D   FF  MV  G  P   T  +L++GL+   
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +     + + +++      +   Y++L+NGL +      A  L    L KG+ PD   H 
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 692 LLV 694
           +++
Sbjct: 574 III 576



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 209/513 (40%), Gaps = 45/513 (8%)

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
            +++L+ LF+   +         +  + C CP       VIK    NS  D ++ I   M
Sbjct: 46  FHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVAL-TVIKAYAKNSMPDQALDIFQRM 104

Query: 264 FDL-GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
            ++ G Q  +  Y  ++  L   NK +EA   F     + L P+  TY  LI   C   +
Sbjct: 105 HEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQ 164

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
            D A ++L  M   G +P    +  ++  L + G   +++   ++      +P    +N 
Sbjct: 165 FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 224

Query: 379 LLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           L++     G    A  I E++        +  S+N+ I  LC+  +  +++E+  RM  +
Sbjct: 225 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 284

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
               D  TYS  + G C   N + A RV+++++   +  D + Y+ ++ G  +  +I E 
Sbjct: 285 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 344

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           +E++  M K GC  +  S+NILI GL    KVD+AI +  L         + TY  ++ G
Sbjct: 345 LELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 403

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K       L +L +       LD  AY  +I  +  + +L + A   + M K G  P+
Sbjct: 404 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 463

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                            H+ ++ IN  V  S++ D                   A     
Sbjct: 464 P----------------HVCNAVINGFVRASKLED-------------------ALRFFG 488

Query: 677 LMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
            M+ KG  P   T+  L+      E  S  +A 
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 117/328 (35%), Gaps = 81/328 (24%)

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           SY+ L+  L +  K  EA   F      G S +  ++NILI   C  ++ DKA  L +  
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 175

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ--- 595
           +  G S    +Y  ++  L K     D L +  +M   G   DV  Y ILI    ++   
Sbjct: 176 WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 235

Query: 596 ---------------------------NKLKDCALF------FNVMVKAGLVPDRETMLS 622
                                      N L  C  F      ++ M K     D  T  +
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING------------LW----KEG 666
           L+HGL     L   +    ++  +    D  +YN ++NG            LW    KEG
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 667 LTSQASY------------------LLDLMLGKGWVPDATTHGLLVGS-----------S 697
             +  SY                  + +L+  K    D+ T+G+LV             S
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 698 VGEEIDSRRFAFDSSSFPDSVSDILAEG 725
           + EE ++ R   D+ ++   ++ +  EG
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREG 443


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 242/534 (45%), Gaps = 48/534 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F VV G     +   AD + V  EM   G  P     + +LE    +    +++     M
Sbjct: 115 FPVVRGLCTRGR--IADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
           H KGC  ++    +V+  +     VD++V +L ++   G + ++  Y  ++  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +   L   M  +D  P+ +T+  LI  LC N   +  +++L  M   G TP   ++  I
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G+C+ G  + +   L     Y   P    +N +L+  C+A ++  A+ +L +M  +  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-- 350

Query: 405 ADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
            DC     ++NI + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++
Sbjct: 351 -DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ + + +S+     +++SY+ +++GLC   +  +A E+   M + GC  +  +FN LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC    V++AI L                                   L QMLV GC+ 
Sbjct: 470 FLCKKGLVEQAIEL-----------------------------------LKQMLVNGCSP 494

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ +Y  +I  + +  K ++     NVMV  G+ P+     S+   L+   +++ V    
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +   +   D+ +YN +I+ L K   T +A      M+  G +P+ +T+ +L+
Sbjct: 555 DNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 206/436 (47%), Gaps = 6/436 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A+ +L  +   G +  +  +N VL  +   KR + D   +  EMV+    PN+ T N
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR-WGDVEELMDEMVRVDCAPNIVTFN 255

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L      E   +   +M + GC P+ R +  +I G+     ++ +  IL  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  Y  ++  LC   + +EA  L   M   D   D++T+  L++  C+N  +D  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLEC 382
            ++LE M+  G  P    +  ++ G C+ G  DE+V  L+      C   T  +  +L+ 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C+AG++  A+ ++ +M  +       ++N  I +LC+   + +A ELL +M+V+   PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +YS  + G  K    E+AL +   +  + +  ++I YS +   L +  ++ + +++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            +        +  +N +I  LC   + D+AI   +   S+G     STYT ++ GL    
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 562 RAKDLLVVLAQMLVEG 577
            AK+   +L+++   G
Sbjct: 616 LAKEAQELLSELCSRG 631



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/399 (21%), Positives = 162/399 (40%), Gaps = 40/399 (10%)

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFL 391
           + + P    F  +VRGLC  G+  +++  L++     C  +   ++ +LE  C +G F  
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           +  +LE M  +    D  + N+ +  +CE   + +A  LL ++       D  +Y+A + 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C    + D   +  ++       + ++++ L+  LC+        EV   MS++GC+ 
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD----- 565
               +  +I G+C    ++ A  + +   S G       Y  ++ GL   +R K+     
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 566 ------------------------------LLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                                         ++ +L QML  GC  DV  Y  +I    ++
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             + +  +    M   G  P+  +   +L GL    +       +++++      +   +
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N LIN L K+GL  QA  LL  ML  G  PD  ++  ++
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 118 LCQNMVKERYPNVREALIS------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
            CQN + +R   + E ++S            ++  F     ++ A+ +L +M+S G K +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              + +VL  +    R + D   +  +M++ G  PN  T N L+  L +   +E A++  
Sbjct: 426 TVSYTIVLKGLCSAGR-WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M   GC P+  ++  VI GL    + ++++ +L  M + GI      Y+ I   L RE
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++ + I++F  ++   +  D + Y  +I+ LC+    D A D    M+  G  P +  +
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 346 VDIVRGLCEVGKFDESVNFLEDKC 369
             +++GL   G   E+   L + C
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELC 628



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 3/247 (1%)

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+A V G C+      A R+   V       ++ ++  +V GLC   +I +A+EV   M
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPP---NAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           S  GC+     +++++   C       ++R+    ++ G +  T     ++  + +    
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            + + +L ++   GC  D+ +Y  +++ +    +  D     + MV+    P+  T  +L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  L        V   + ++       D  MY  +I+G+ KEG    A+ +L+ M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 684 VPDATTH 690
            P+   +
Sbjct: 318 KPNVVCY 324


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 149/659 (22%), Positives = 289/659 (43%), Gaps = 59/659 (8%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL 137
             L +  W S+        D YCK+       G++E    + + M  +          SL
Sbjct: 170 GGLDVVGWNSL-------VDGYCKV-------GDMETAFAVAERMKAQGVGVDVVGYNSL 215

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE-KRGFADFVF-VYKEMVK 195
           V        V+ A  ++  M   G + +V  + +    IVE  +R   D  F +Y+EMV+
Sbjct: 216 VAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF---IVEYCRRNAVDDAFSLYEEMVR 272

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G++P+V TL+ L+  L +  R   A   FR M K G  PN  T+ ++I  L    R ++
Sbjct: 273 KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNE 332

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           S+S+LGE+   G+ ++L  YT ++  LC+E K++EA  +F+   + +  P+ +TY  LI+
Sbjct: 333 SLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLID 392

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-------- 367
            LC+   +D A  +L +M    ++P    F  I+ GL + G   ++ +++ +        
Sbjct: 393 ALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452

Query: 368 -------------KCGYVTSPHNALLECCCNA------------------GKFFLAKCIL 396
                        KC    +  +   E  C                    GK   A+ + 
Sbjct: 453 NVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M +R +  D  ++   I  L +   +  A+++   +   +++PD   Y+ F+   C L
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A     ++ +  L  D ++Y+ ++    +  K  +A+++   M ++    +  ++
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + LI GL     V+KA  L +   SSG S T+ T+ +++    + +R+  +L +   M+ 
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   D+  Y  L++ +      +   +    M   G+ PD  T  +L+ G      L  
Sbjct: 693 AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDN 752

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             S  ++++      + + +N L+ GL   G   ++  +L+ M  +G  P   T+ +LV
Sbjct: 753 AFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILV 811



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 134/559 (23%), Positives = 238/559 (42%), Gaps = 51/559 (9%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G ++E + + ++ + + +         L+ +      V+GA +VL  M       +V  F
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422

Query: 170 NVVLGAIVEEKRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           + ++  +V  KRG+      Y +EM + GI PNV T   +++  F+    E+ALD +  M
Sbjct: 423 SSIINGLV--KRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             +G   N    + ++ GL  N +++ + ++  EM + G+ L+   YT +I  L +   L
Sbjct: 481 LCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNL 540

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV---- 344
             A ++ + +   +L+PD + Y   INCLC   +  +A   LE+M   GL P D V    
Sbjct: 541 PAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP-DQVTYNT 599

Query: 345 --------------------------------FVDIVRGLCEVGKFDESVNFLEDKCGYV 372
                                           +  ++ GL E G  +++   L +     
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
            SP    H  +L+ C    +  L   I E M +  + AD   +N  +R LC N   RKA 
Sbjct: 660 FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            +L  M    + PD  T++A +LG  K  + ++A   + Q+    +  +  +++ L+ GL
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
               +I E+  V   M K G   S+ +++IL+ G        +A+RL       G     
Sbjct: 780 ESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKV 839

Query: 548 STYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
           STY  ++    K   + +AK+L     +M   G       Y IL+   S+     +   F
Sbjct: 840 STYNALISDFSKVGMMSQAKEL---FNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKF 896

Query: 605 FNVMVKAGLVPDRETMLSL 623
              M + G  P + T+ S+
Sbjct: 897 LKDMKEKGFSPSKGTLSSI 915



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 221/509 (43%), Gaps = 15/509 (2%)

Query: 193 MVKAGIVPNVDTL--NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           MV+ G +  +D +  N L++   +   +E+A     RM  +G   +   +  ++ GL   
Sbjct: 163 MVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRA 222

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             VD +  ++  M   G++  +  YT  I   CR N +++A  L++ M    ++PD +T 
Sbjct: 223 GEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTL 282

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             L+  LC++ R  +A  +  +M  IG  P    +  ++  L +  + +ES++ L    G
Sbjct: 283 SALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLL----G 338

Query: 371 YVTSP--------HNALLECCCNAGKFFLAKCILEK-MADRKIADCDSWNIPIRWLCENE 421
            V S         + AL++  C  GK   AK +    ++D    +  ++ + I  LC+  
Sbjct: 339 EVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAG 398

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A ++L  M   S+ P+  T+S+ + G  K      A    R++  + +  + ++Y 
Sbjct: 399 NVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYG 458

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            +++G  +      A++V+  M   G  ++    + L+ GL    K++KA  L       
Sbjct: 459 TVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNER 518

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       YT ++ GL K         V  ++  +    D   Y + I  +    K K+ 
Sbjct: 519 GVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEA 578

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
             F   M   GL PD+ T  +++   +   +       +N +   S   +   Y+ LI G
Sbjct: 579 ESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVG 638

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           L++ G   +A YLL+ M   G+ P + TH
Sbjct: 639 LFEAGAVEKAKYLLNEMSSSGFSPTSLTH 667



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 216/523 (41%), Gaps = 17/523 (3%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN  T   L++ L +   ++ A      M +K   PN  TF  +I GL+    V  +   
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           + EM + GI   +  Y  +I    +    E A+ ++  M    +  ++   + L+N L +
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---------NFLEDKCG 370
           N +++ A  +  +M   G+      +  ++ GL + G    +          N L D   
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
           Y     N  + C C  GK   A+  LE+M    +  D  ++N  I       +  KA +L
Sbjct: 562 Y-----NVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKL 616

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M  SS+ P+  TYS  ++G  +    E A  +  ++S+      S+++ ++++   Q
Sbjct: 617 LNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQ 676

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             +    +E+   M   G     + +N L+  LC      KA+ +       G +  T T
Sbjct: 677 GRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT 736

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           +  ++LG  K     +      QML  G + +V  +  L+  +    ++ +  +  N M 
Sbjct: 737 FNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G+ P   T   L+ G    S          ++V    +   S YN LI+   K G+ S
Sbjct: 797 KRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMS 856

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFD 710
           QA  L + M  +G +P + T+ +LV   S +    + R+F  D
Sbjct: 857 QAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKD 899



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 120/540 (22%), Positives = 224/540 (41%), Gaps = 36/540 (6%)

Query: 165 SVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           SVD   +NVV+    E+  G A    +  EM K G+  +  T+N +L  L    R++ A 
Sbjct: 100 SVDTVSYNVVMSGFSEQG-GLAPEALL-AEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAA 157

Query: 223 DQFRRMHKKGCCP--NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
                M + G     +   +  ++ G      ++ + ++   M   G+ +++  Y  ++ 
Sbjct: 158 ALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVA 217

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LCR  +++ A  +   M+   + P+ +TY   I   C    +DDA  + E+M+  G+ P
Sbjct: 218 GLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP 277

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
                  +V GLC+ G+F E+     +      +P++             +  C+L    
Sbjct: 278 DVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNH-------------VTYCML---- 320

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
                        I  L + +   ++  LLG +V   VV D   Y+A +   CK    ++
Sbjct: 321 -------------IDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDE 367

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +FR   + +   + ++Y+ L++ LC+   +  A +V   M +   S +  +F+ +I 
Sbjct: 368 AKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIIN 427

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GL     V KA          G      TY  ++ G  K    +  L V  +ML EG  +
Sbjct: 428 GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV 487

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +      L+  + +  K++     F  M + G++ D     +L+ GL     L       
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVG 547

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
            +L   + + D+ +YN+ IN L   G + +A   L+ M   G  PD  T+  ++ +   E
Sbjct: 548 QELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSRE 607



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 143/349 (40%), Gaps = 9/349 (2%)

Query: 43  KSHQTTDYEAKIQSLRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTAD 97
           KS +   +  ++QS    L PD      +I         + ALK+   +  +   +    
Sbjct: 574 KSKEAESFLEEMQST--GLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK-RSSIKPNLI 630

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I+ L  AG VE+ + L   M    +         ++ +     R +  + +   M
Sbjct: 631 TYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWM 690

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G    + V+N ++  +          V V +EM   GI P+  T N L+   F++  
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMV-VLEEMSGRGIAPDTITFNALILGHFKSGH 749

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +++A   + +M   G  PN  TF  ++ GL +  R+ +S  +L EM   GI+     Y  
Sbjct: 750 LDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++    +++   EA+RL+  M     +P   TY  LI+   +   +  A ++  +M   G
Sbjct: 810 LVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
           + PT   +  +V G  ++    E   FL+D      SP    L     A
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRA 918



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 5/220 (2%)

Query: 150 AMRVLVNMNSGGFKLSVDVFN-VVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNY 207
           AM VL  M+  G       FN ++LG     K G  D  F  Y +M+  GI PNV T N 
Sbjct: 718 AMVVLEEMSGRGIAPDTITFNALILGHF---KSGHLDNAFSTYDQMLYHGISPNVATFNT 774

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           LL  L    RI  +      M K+G  P++ T++I++ G    S   ++V +  EM   G
Sbjct: 775 LLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKG 834

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
              ++S Y  +I    +   + +A  LF  M+   ++P   TY+ L++   +     +  
Sbjct: 835 FLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVR 894

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
             L+DM   G +P+      I R   + G   E+   L++
Sbjct: 895 KFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKN 934


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 239/516 (46%), Gaps = 6/516 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  V   M   G K ++D +N ++   +   + + + V + +EM   G  PN  T   LL
Sbjct: 257 AEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK-WKEVVRMLEEMSAGGPKPNCCTYGSLL 315

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +  R   A   F  M  KG  P+  T+ I++ G      + +   +L  M   GI 
Sbjct: 316 NYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGIS 375

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
                +        +   +++A+ +F  MR   L PD ++Y  LI+ LC+  R+DDA   
Sbjct: 376 PNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVK 435

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCN 385
              MI  G+TP   VF  +V GLC V K+++      +       P+    N +L   C 
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 495

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G+    + +++ +    +  D  S+N  I   C    I +A +LL  MV   + PD  +
Sbjct: 496 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFS 555

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK    + A   FR++ +  +    ++Y+ ++ GL Q ++ +EA E++  M 
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G      ++NI++ GLC    VD+AI++     S G      T+  ++  L+K  R +
Sbjct: 616 NSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D + + A +   G   +V  Y ++++++ E+  L++    F+ M K G  P+ + + +L+
Sbjct: 676 DAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 735

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
             L     +    + ++KL   +  +++S  ++LI+
Sbjct: 736 RRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLIS 771



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 243/561 (43%), Gaps = 48/561 (8%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF-RRMHKKGCCPNSR 238
           + GFA F  +    +K G   +   +N LL  L +  R+  A+D   +RM + GC P++ 
Sbjct: 111 EHGFAAFGLI----LKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTV 166

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGI---QLELSFYTCIIPMLCRENKLEEAIRLF 295
           ++ I++KGL    R ++++ +L  M D  +      +  Y+ +I     E ++++   LF
Sbjct: 167 SYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLF 226

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M    + PD +TY  +I+ LC+    D A  + + MI  G+ P  D +  ++ G   +
Sbjct: 227 LEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSI 286

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSW 410
           GK+ E V  LE+       P    + +LL   C  G+   A+   + M  + I     ++
Sbjct: 287 GKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTY 346

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
            I +        + + ++LL  MV + + P+   ++ F     K    + A+ +F ++  
Sbjct: 347 GIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQ 406

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           Q L  D++SY  L++ LC++ ++ +A   F  M   G +     F+ L+YGLC + K +K
Sbjct: 407 QGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEK 466

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
              L     + G       +  I+  L K  R  +   ++  +   G   DV +Y  LI 
Sbjct: 467 VEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLID 526

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL--------HLVSSGIN- 641
                  + + +     MV  GL PD  +  +LLHG     ++         ++S+GI  
Sbjct: 527 GHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITP 586

Query: 642 ---------------KLVSDSEVL-----------DSSMYNILINGLWKEGLTSQASYLL 675
                          K  S+++ L           D   YNI++NGL K     +A  + 
Sbjct: 587 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMF 646

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             +  KG   +  T  +++G+
Sbjct: 647 QNLCSKGLQLNIITFNIMIGA 667



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 133/571 (23%), Positives = 249/571 (43%), Gaps = 37/571 (6%)

Query: 145 YRVNGA---MRVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIV 199
           Y   GA   M  L+N M + G   +  +FN+   A    K G  D    ++ +M + G+ 
Sbjct: 353 YATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA--KCGIIDKAMDIFNKMRQQGLS 410

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+  +   L++ L +  R++ A  +F +M  +G  P+   F  ++ GL    + +    +
Sbjct: 411 PDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEEL 470

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM ++GI   + F+  I+  LC+E ++ E  RL   +  + + PD ++Y  LI+  C 
Sbjct: 471 FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL 530

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
              +D+A+ +LE M+ +GL P    +  ++ G C+ G+ D + +          +P    
Sbjct: 531 AGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVT 590

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N +L       +F  AK +   M +     D  ++NI +  LC++  + +A ++   + 
Sbjct: 591 YNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC 650

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  +  T++  +    K    EDA+ +F  + A  LV + ++Y  +VE L +   + 
Sbjct: 651 SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA----IRLRSLAYSSGTSYTTSTY 550
           E   +F  M KNG + +S   N L+  L     + +A     +L    +S   S TTS  
Sbjct: 711 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAS-TTSML 769

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS-----EQNKLKDCALFF 605
             I         AK L                + Y IL ++ S     +  ++ D    F
Sbjct: 770 ISIFSSDEYQHHAKSL---------------PKKYRILNEANSSALIKKARRIDDAYSLF 814

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M+  GL PD  T  ++LHGL    +          +++    ++   YNI++NGL K 
Sbjct: 815 REMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKS 874

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               +A  +   +  KG   +  T  +++G+
Sbjct: 875 NCVDEAFKMFQSLCSKGLQLNIITFNIMIGA 905



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 217/479 (45%), Gaps = 24/479 (5%)

Query: 193  MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            MV  G+ P+  + N LL    +  RI+SA   FR+M   G  P   T+  ++ GL    R
Sbjct: 544  MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603

Query: 253  VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              ++  +   M + G + ++  Y  I+  LC+ N ++EAI++F+ + +  L  + +T+  
Sbjct: 604  FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663

Query: 313  LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
            +I  L +  R +DA D+   +   GL      +  +V  L E G  +E  +         
Sbjct: 664  MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723

Query: 373  TSPH----NALLECCCNAGKFFLAKCILEKMADRKI---ADCDSWNIPI----RWLCENE 421
            T+P+    NAL+    + G    A   L K+ +R     A   S  I I     +    +
Sbjct: 724  TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAK 783

Query: 422  EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
             + K Y +L     S+++              K    +DA  +FR++  + L  D ++Y+
Sbjct: 784  SLPKKYRILNEANSSALIK-------------KARRIDDAYSLFREMLMKGLTPDVVTYN 830

Query: 482  KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             ++ GL Q  + +EA E++  M  +   ++  ++NI++ GLC    VD+A ++     S 
Sbjct: 831  TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 890

Query: 542  GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
            G      T+  ++  L+K  R +D + + A +   G   DV  Y ++ +++ E+  L++ 
Sbjct: 891  GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEF 950

Query: 602  ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F  M K+G   D   + +L+  L     +    + ++KL   +  L++S  + LI+
Sbjct: 951  DGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELIS 1009



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/439 (21%), Positives = 193/439 (43%), Gaps = 10/439 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI-LEDM 333
           Y+ +I   CR   LE     F ++       D +   +L+N LC+  R+ +A D+ L+ M
Sbjct: 97  YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRM 156

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDK---CGYVTSPHNALLECCCNA 386
             +G  P    +  +++GLC   + +E++  L    +D+   C      ++ ++      
Sbjct: 157 PELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTE 216

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G+      +  +M DR I  D  ++   I  LC+ +   +A  +  +M+ + V P+  TY
Sbjct: 217 GQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY 276

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  + G   +  +++ +R+  ++SA     +  +Y  L+  LC+  +  EA   F  M  
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIG 336

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G   S +++ I+++G      + +   L +L  ++G S     +        K      
Sbjct: 337 KGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDK 396

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            + +  +M  +G + D  +Y  LI ++ +  ++ D  + FN M+  G+ PD     SL++
Sbjct: 397 AMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVY 456

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL    +   V     ++++     +   +N ++  L KEG   +   L+D +   G  P
Sbjct: 457 GLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 516

Query: 686 DATTHGLLV-GSSVGEEID 703
           D  ++  L+ G  +   ID
Sbjct: 517 DVISYNTLIDGHCLAGTID 535



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 124/280 (44%), Gaps = 4/280 (1%)

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           E+E +   +  + R     V P+  TYS  +   C++ + E     F  +      +D I
Sbjct: 71  ESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHI 130

Query: 479 SYSKLVEGLCQVEKITEAVEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             ++L+ GLC  +++ EA++V    M + GC   + S+NIL+ GLC  ++ ++A+ L  +
Sbjct: 131 VINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHM 190

Query: 538 AYSSGT---SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                         +Y+ ++ G     +      +  +M+  G   DV  Y  +I  + +
Sbjct: 191 MADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCK 250

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
                     F  M+  G+ P+ +T   L+HG     +   V   + ++ +     +   
Sbjct: 251 AQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCT 310

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y  L+N L K G   +A +  D M+GKG  P  TT+G+++
Sbjct: 311 YGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIML 350



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 2/192 (1%)

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
           A++++ R   D   +++EM+  G+ P+V T N +L  LF+T R   A + +  M      
Sbjct: 799 ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
            N  T+ I++ GL  ++ VD++  +   +   G+QL +  +  +I  L +  + E+A+ L
Sbjct: 859 MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD-IVRGLC 353
           F  + A  L+PD +TY  +   L E   L++ + +   M   G TP D   ++ +VR L 
Sbjct: 919 FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSG-TPLDSRLLNALVRRLL 977

Query: 354 EVGKFDESVNFL 365
           + G    +  +L
Sbjct: 978 QRGDISRAGAYL 989



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 126/287 (43%), Gaps = 31/287 (10%)

Query: 32   TIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKR 91
            ++  S+ + +I    + +Y+   +SL          R+L+  N  SSAL     +   +R
Sbjct: 760  SVEASTTSMLISIFSSDEYQHHAKSLPKKY------RILNEAN--SSAL-----IKKARR 806

Query: 92   FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE-RYPNVREALISLVFS------FVNH 144
                   + +M++K GL  +V     +   + +  R+   +E  +S++ S      +  +
Sbjct: 807  IDDAYSLFREMLMK-GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 865

Query: 145  YRVNG---------AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
              +NG         A ++  ++ S G +L++  FN+++GA+++  R   D + ++  +  
Sbjct: 866  IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRK-EDAMDLFAAIPA 924

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             G+VP+V T   + E L E   +E     F  M K G   +SR    +++ L+    +  
Sbjct: 925  NGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISR 984

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            + + L ++ +    LE S  + +I +  R      A  L +  R L+
Sbjct: 985  AGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLLN 1031


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 158/666 (23%), Positives = 295/666 (44%), Gaps = 29/666 (4%)

Query: 37  SETDMIKSHQTTDYEAKIQSLRHN-LSPDHLIRVL-DNTNDLSSALKIFKWVSIQKRFQH 94
           S  ++++  +  D+  +I SL  + L+P    RVL +   D   AL+ F+W   +  FQH
Sbjct: 73  SVREIVREQRWDDF--RIVSLFDSALAPIWASRVLVELCQDARLALRFFEWAKGRIGFQH 130

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL-VFSFVNHYRVNGAMRV 153
           T++ YC ++  L  A    +   + + ++      +R  L S  VF  +   R       
Sbjct: 131 TSEAYCILVHILFCARFYSDANAVLKELI-----CLRRVLPSWDVFDLLWATR------- 178

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
             N+   GF     VF+ +  A++E      +    + +M K  + P   + N LL  L 
Sbjct: 179 --NVCVPGF----GVFDALFSALIELGM-LEEASECFLKMRKFRVFPKPRSCNALLHRLS 231

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +  R + +   F+ M   G   +  T+ I+I  L     ++ + S+  +M + G   ++ 
Sbjct: 232 KVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV 291

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I    +   L+E I +F+ M+  D  PD +TY  LINC C+  R+  A + L +M
Sbjct: 292 TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 351

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
              GL P    +   +   C+ G   E++ F  D      +P    + +L++  C AG  
Sbjct: 352 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 411

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  ++E++    I  +  ++   +  LCE   +++A E+   M+ + V P+  TY+A 
Sbjct: 412 AEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 471

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           V G  K    E A  + +++  + +  D + Y  ++ GLC   ++ EA  +   + ++G 
Sbjct: 472 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           + ++  +  L+       +  +A+ L       G   T  TY  ++ GL K    ++ + 
Sbjct: 532 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMH 591

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
              +M   G   +V  Y  L+  + + N  +     F+ M+  G++PD+    +L+ G  
Sbjct: 592 HFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 651

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               L    +  ++++     LD   Y  LI GL   G   +A  LLD M+GKG +PD  
Sbjct: 652 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 711

Query: 689 THGLLV 694
            +  L+
Sbjct: 712 VYMCLI 717



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 221/515 (42%), Gaps = 53/515 (10%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF---VYKEMVKAGIVPNV 202
           R + + +   +M + G K SV  +N+++  + +E     D      ++ +M +AG  P++
Sbjct: 235 RGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKE----GDLEMARSLFTQMKEAGFTPDI 290

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T N L++   +   ++  +  F +M    C P+  T+  +I       R+  +   L E
Sbjct: 291 VTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHE 350

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G++  +  Y+  I   C+E  L+EAI+ F  MR + L P+E TY  LI+  C+   
Sbjct: 351 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
           L +A  ++E+++  G+      +  ++ GLCE G+  E+            +P    + A
Sbjct: 411 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA 470

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM---- 433
           L+     A +   AK IL++M ++ I  D   +   +  LC    + +A  L+G +    
Sbjct: 471 LVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 530

Query: 434 -----VVSSVVPDC--------------------------ATYSAFVLGKCKLCNYEDAL 462
                V+ + + D                            TY A + G CK    ++A+
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             F ++S   L  +   Y+ LV+GLC+      A ++F  M   G      ++  LI G 
Sbjct: 591 HHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 650

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCA 579
                + +A+ LR      G       YT ++ GL    ++Q+A++L   L +M+ +G  
Sbjct: 651 MKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNL---LDEMIGKGVL 707

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            D   Y  LI+      K+ +     N M K G++
Sbjct: 708 PDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/283 (20%), Positives = 129/283 (45%), Gaps = 17/283 (6%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKER--------YPNVREALI--------SLVF 139
           A+   + +L  G+A N E    L    +K +           ++E  I        ++++
Sbjct: 449 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 508

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
              N  R+  A  ++  +   G   +  ++  ++ A  +  +   + + + +EM+  G++
Sbjct: 509 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA-TEALTLLEEMLDLGLI 567

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
               T   L++ L ++  ++ A+  F RM + G  PN   +  ++ GL  N+  + +  +
Sbjct: 568 ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKL 627

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM D G+  +   YT +I    +   L+EA+ L   M  + +  D   Y  LI  L  
Sbjct: 628 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSH 687

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + ++  A ++L++MI  G+ P + V++ +++    +GK DE++
Sbjct: 688 SGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 150/648 (23%), Positives = 278/648 (42%), Gaps = 15/648 (2%)

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           +F+     Y  +I  L      + M  L   M +  Y        +++  F    R++ A
Sbjct: 193 KFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAA 252

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + +L  M S      + ++NV +      K G  D  +  + E+   G++P+  T   ++
Sbjct: 253 LSLLDEMKSNCLHADIVLYNVCIDCF--GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
            VL + NR++ A++ F +M +    P +  +  +I G  +  + D++ S+L      G  
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCI 370

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y CI+  L ++ +L EA+R F+ M+  D  P+  TY  LI+ LC+   ++ A  +
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKV 429

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCN 385
            + M   GL P       ++  LC+  K DE+ +  E     + SP      +L++    
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK 489

Query: 386 AGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G+   A  + E+M D  KI +   +   I+   +       +++   M+     PD   
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRL 549

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
            +A++    K         +F ++ ++  + D +SYS L+ GL +     E  E+F  M 
Sbjct: 550 LNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMK 609

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           + GC L + ++N  I G C   KV+KA +L     + G   T  TY  ++ GL K+ R  
Sbjct: 610 EQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLD 669

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           +  ++  +    G  L+V  Y  LI    +  ++ +  L    +++ GL P+  T   LL
Sbjct: 670 EAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 729

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
             L    +++        + +     +   Y+ILINGL +    ++A      M  +G  
Sbjct: 730 DALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLK 789

Query: 685 PDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
           P+  T+     GL    ++ E          +   PDS S + + EGL
Sbjct: 790 PNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGL 837



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 227/523 (43%), Gaps = 18/523 (3%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F  F  +  EM  AG  P+  T   L+    ++N++    D  + M K    P    +  
Sbjct: 144 FDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTT 203

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I  L +    D  +++  +M +LG ++ +  +T +I +  RE +L+ A+ L   M++  
Sbjct: 204 LIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNC 263

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L  D + Y   I+C  +  ++D A     ++   GL P D  +  ++  LC+  + DE+V
Sbjct: 264 LHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAV 323

Query: 363 NFLED-------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPI 414
              E         C Y    +N ++    +AGKF  A  +LE+   R  I    ++N  +
Sbjct: 324 EIFEQMEQNRNVPCAYA---YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCIL 380

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             L +   + +A      M      P+ +TY+  +   CK    E A +V   +    L 
Sbjct: 381 TCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLF 439

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + ++ + +++ LC+ +K+ EA  +F  M+   CS    +F  LI GL    +VD A RL
Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE---AYCILIQS 591
                 S        YT ++    K  R +D   +  +M+  GC+ D+    AY   +  
Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFK 559

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             E  K +  ALF  +  + G +PD  +   L+HGL               +     VLD
Sbjct: 560 AGETGKGR--ALFEEIKSR-GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLD 616

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  YN  I+G  K G  ++A  LL+ M  KG  P   T+G ++
Sbjct: 617 THAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 135/585 (23%), Positives = 258/585 (44%), Gaps = 58/585 (9%)

Query: 59  HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           H L PD      +I VL   N L  A++IF+ +  Q R    A  Y  MI+  G AG  +
Sbjct: 297 HGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME-QNRNVPCAYAYNTMIMGYGSAGKFD 355

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
           E                        +S +   +  G +             SV  +N +L
Sbjct: 356 E-----------------------AYSLLERQKARGCIP------------SVIAYNCIL 380

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
             + ++ R   + +  ++EM K    PN+ T N L+++L +   +E+A      M + G 
Sbjct: 381 TCLGKKGR-LGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGL 438

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN  T  I+I  L    ++D++ SI   M       +   +  +I  L ++ ++++A R
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYR 498

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD---DVFVDIVR 350
           L++ M   D +P+ + Y  LI    +  R +D + I ++MI  G +P     + ++D V 
Sbjct: 499 LYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVF 558

Query: 351 GLCEVGK----FDE--SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
              E GK    F+E  S  F+ D   Y    H  L++       + L   + E+     +
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIH-GLVKAGFARETYELFYAMKEQGC---V 614

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++N  I   C++ ++ KAY+LL  M      P   TY + + G  K+   ++A  +
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F +  +  L L+ + YS L++G  +V +I EA  +   + + G + +  ++N L+  L  
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734

Query: 525 MRKVDKAIR-LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             ++++A+   +++    GT     TY+ ++ GL ++++     V   +M  +G   +  
Sbjct: 735 AEEINEALVCFQNMKNLKGTP-NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTI 793

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            Y  +I  +++   + + +  F      G VPD  +  +++ GL+
Sbjct: 794 TYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLS 838



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 181/403 (44%), Gaps = 9/403 (2%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K+G  D  + +Y++M+ +  +PN      L++  F+  R E     F+ M  +GC P+ R
Sbjct: 489 KQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR 548

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
                +  +          ++  E+   G   ++  Y+ +I  L +     E   LF  M
Sbjct: 549 LLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM 608

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +    + D   Y   I+  C++ +++ A  +LE+M   G  PT   +  ++ GL ++ + 
Sbjct: 609 KEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRL 668

Query: 359 DESVNFLEDKCGYVTS----PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           DE+    E+            +++L++     G+   A  I+E++  + +  +  +WN  
Sbjct: 669 DEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 728

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +  L + EEI +A      M      P+  TYS  + G C++  +  A   ++++  Q L
Sbjct: 729 LDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGL 788

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             ++I+Y+ ++ GL +   I EA  +F     NG    S+S+N +I GL   R+  +A +
Sbjct: 789 KPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYK 848

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQM 573
           +       G +  T T   ++  L K   L++A  +  VL ++
Sbjct: 849 IFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREI 891



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 106/497 (21%), Positives = 214/497 (43%), Gaps = 15/497 (3%)

Query: 208 LLEVLFETNRIESALDQFRRMHKK---GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
           ++ VL     +  A+  FR   +K     CP +  ++ ++  +  N + D    ILGEM 
Sbjct: 98  VIGVLRRAKDVNQAISYFRWTERKTDQALCPEA--YDSLLLVMAKNVKFDYFEQILGEMS 155

Query: 265 DLGIQLELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
             G     S  TCI  +L   + NKL E   L + MR     P    Y  LI  L     
Sbjct: 156 IAG--FGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE 213

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---KCGYV-TSPHNA 378
            D    +   M  +G   +  +F  ++R     G+ D +++ L++    C +     +N 
Sbjct: 214 SDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNV 273

Query: 379 LLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
            ++C   AGK  +A K   E  +   + D  ++   I  LC+   + +A E+  +M  + 
Sbjct: 274 CIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR 333

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
            VP    Y+  ++G      +++A  +  +  A+  +   I+Y+ ++  L +  ++ EA+
Sbjct: 334 NVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEAL 393

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
             F  M K+    + S++N+LI  LC   +V+ A ++R     +G      T   ++  L
Sbjct: 394 RTFEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRL 452

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K ++  +   +   M  + C+ D   +C LI  + +Q ++ D    +  M+ +  +P+ 
Sbjct: 453 CKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA 512

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
               SL+       +         +++      D  + N  ++ ++K G T +   L + 
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEE 572

Query: 678 MLGKGWVPDATTHGLLV 694
           +  +G++PD  ++ +L+
Sbjct: 573 IKSRGFIPDVMSYSILI 589



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/411 (21%), Positives = 186/411 (45%), Gaps = 14/411 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T+C +I  LG  G V++   L + M+  ++ PN      SL+ SF    R     ++   
Sbjct: 479 TFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAV-VYTSLIKSFFKCGRKEDGHKIFKE 537

Query: 157 MNSGGFKLSVDVFNVVLGAIV---EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           M   G    + + N  +  +    E  +G A    +++E+   G +P+V + + L+  L 
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRA----LFEEIKSRGFIPDVMSYSILIHGLV 593

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +        + F  M ++GC  ++  +   I G   + +V+ +  +L EM   G Q  + 
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I  L + ++L+EA  LF+  ++  L  + + Y  LI+   +  R+D+A  I+E++
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
           +  GLTP    +  ++  L +  + +E++   ++      +P    ++ L+   C   KF
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKF 773

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A    ++M  + +  +  ++   I  L +   I +A  L  R   +  VPD A+Y+A 
Sbjct: 774 NKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           + G        +A ++F +   +   + + +   L++ L + E + +A  V
Sbjct: 834 IEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIV 884



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 10/242 (4%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
           D +CK       +G V +   L + M  K R P V     S++       R++ A  +  
Sbjct: 625 DGFCK-------SGKVNKAYQLLEEMKTKGRQPTVV-TYGSVIDGLAKIDRLDEAYMLFE 676

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
              S G +L+V +++ ++    +  R   +   + +E+++ G+ PNV T N LL+ L + 
Sbjct: 677 EAKSNGLELNVVIYSSLIDGFGKVGR-IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 735

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             I  AL  F+ M      PN  T+ I+I GL    + + +     EM   G++     Y
Sbjct: 736 EEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITY 795

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T +I  L +   + EA  LF+  +A   +PD  +Y  +I  L  + R  +A  I E+  +
Sbjct: 796 TTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRM 855

Query: 336 IG 337
            G
Sbjct: 856 KG 857



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 9/207 (4%)

Query: 99  YCKMILKLGLAGNVEE----MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           Y  +I   G  G ++E    ME L Q   K   PNV      L+ + V    +N A+   
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQ---KGLTPNVY-TWNCLLDALVKAEEINEALVCF 745

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
            NM +     +   +++++  +   ++    FVF ++EM K G+ PN  T   ++  L +
Sbjct: 746 QNMKNLKGTPNHITYSILINGLCRVRKFNKAFVF-WQEMQKQGLKPNTITYTTMIAGLAK 804

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              I  A   F R    G  P+S ++  +I+GL  + R  ++  I  E    G  +    
Sbjct: 805 AGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKT 864

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRAL 301
              ++  L ++  LE+A  +  ++R +
Sbjct: 865 CIALLDALQKDECLEQAAIVGAVLREI 891


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 159/690 (23%), Positives = 283/690 (41%), Gaps = 95/690 (13%)

Query: 29  CANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNT--------------- 73
           C   +P  S ++   S Q  D  +  + ++ +L  D  I VL ++               
Sbjct: 22  CIFRLPFVSYSNANNSFQYLDIGSLRKIIQQDLWNDPKIVVLFDSALAPIWVSKILLGLR 81

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
            D   ALK FKW   Q  F+HT ++YC ++  +  A     M     + VKE   N R  
Sbjct: 82  EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRA----RMYTDAHDTVKEVIMNSR-- 135

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA--------- 184
            + + F   N + +  + R +    SG F +   VF V LG + E    F+         
Sbjct: 136 -MDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVF-VELGLLEEANECFSRMRNFRTLP 193

Query: 185 -----DFVF--------------VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
                +F+                + +M+ AGI P+V T N +++ L +   +E++   F
Sbjct: 194 KARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLF 253

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
            +M + G  P+  T+  +I G      +++  S+  EM D+G   ++  Y  +I   C+ 
Sbjct: 254 VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKF 313

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            K+  A   F  M+   L P+ +TY  LI+  C+   +  A  +L DM   GL P +  +
Sbjct: 314 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTY 373

Query: 346 VDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
             ++   C+ G   E+   L D      K   VT  + ALL+  C AG+   A+ +   M
Sbjct: 374 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT--YTALLDGLCKAGRMIEAEEVFRSM 431

Query: 400 ADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC----- 453
               I+ +   +   +    + E +  A ++L +M   ++ PD   Y + + G C     
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491

Query: 454 ------------------------------KLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
                                         K     DAL  F+++    +    ++Y  L
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++GLC+   +  AV+ FC M   G   + + +  LI GLC    ++ A +L       G 
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           +   + +T ++ G +K    ++ LV++++M       D+  Y  L+   S+  +L     
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           FFN M++ G++P+    + LL       QL
Sbjct: 672 FFNEMIEKGILPEEVLCICLLREYYKRGQL 701



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 5/334 (1%)

Query: 354 EVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCD 408
           E+G  +E+         + T P     N LL     +G   L +     M    IA    
Sbjct: 172 ELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVF 231

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I +LC+  ++  +  L  +M    + PD  TY++ + G  K+ + E+   +F ++
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                V D I+Y+ L+   C+ EK+  A E F  M  NG   +  +++ LI   C    +
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             AI+L      +G      TYT ++    K     +   +L  ML  G  L++  Y  L
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           +  + +  ++ +    F  M+K G+ P+++   +L+HG     ++      + ++   + 
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
             D  +Y  +I G   +    +   +L+ M  +G
Sbjct: 472 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 120/293 (40%)

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           R +    S N  +  L ++   +   +    M+ + + P   TY+  +   CK  + E++
Sbjct: 190 RTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENS 249

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
            R+F Q+    L  D ++Y+ L++G  +V  + E   +F  M   GC     ++N LI  
Sbjct: 250 RRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 309

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            C   K+ +A    S   ++G      TY+ ++    K    +  + +L  M   G   +
Sbjct: 310 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPN 369

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
              Y  LI +  +   L +     N M++AG+  +  T  +LL GL    ++        
Sbjct: 370 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 429

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++ D    +  +Y  L++G  K      A  +L  M      PD   +G ++
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 482



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 130/299 (43%), Gaps = 34/299 (11%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L  AG + E E + ++M+K+     ++   +LV  ++   R+  AM++L  M
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466

Query: 158 NSGGFKLSVDVFNVVLGA------------IVEE--KRGFA------------------- 184
                K  + ++  ++              I+EE   RG +                   
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526

Query: 185 -DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            D +  ++EM   G+   + T   L++ L E   +E A+D F RM   G  PN   +  +
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I GL  N+ ++ +  +  EM   G+  +++ +T +I    +   L+EA+ L   M  L +
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 646

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             D   Y  L++   +   L  A     +MI  G+ P + + + ++R   + G+ DE++
Sbjct: 647 EFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/388 (20%), Positives = 146/388 (37%), Gaps = 38/388 (9%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           LEEA   F  MR    +P   +   L++ L ++           DMI  G+ P+   +  
Sbjct: 176 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 235

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++  LC+ G  + S            SP    +N+L++     G        LE++A   
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS-------LEEVAS-- 286

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                                    L   M     VPD  TY+  +   CK      A  
Sbjct: 287 -------------------------LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFE 321

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            F ++    L  + ++YS L++  C+   +  A+++   M + G   +  ++  LI   C
Sbjct: 322 YFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC 381

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               + +A +L +    +G      TYT ++ GL K  R  +   V   ML +G + + +
Sbjct: 382 KAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y  L+    +  +++D       M +  + PD     S++ G     +L      + ++
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQA 671
            S     +  +   +I+  +K G +S A
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDA 529


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 139/575 (24%), Positives = 244/575 (42%), Gaps = 72/575 (12%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S   +NVVL  +       AD + +Y+ M++  + P   T       L    R   AL  
Sbjct: 141 SFRSYNVVLSTLARAD-CHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            R M + GC P++  ++ VI  L+A   V ++  +L EM  +G   +++ +  ++  LC 
Sbjct: 200 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCG 259

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA------------------ 326
             ++ EA RL   M     MP  +TY  L+  LC   + D+A                  
Sbjct: 260 LGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTV 319

Query: 327 -------------NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKC 369
                         ++ E M   G  P    +  ++ GLC++G+F  +V  L    E  C
Sbjct: 320 IRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGC 379

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYE 428
                 ++ LL   C  G +  A+ +L++M  +  + +   +N  I  LC++ ++ +A  
Sbjct: 380 APNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATR 439

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L+  M      PD  TY+  +   C     E+A  +FR +  + +V + I+Y+ L+  L 
Sbjct: 440 LVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALL 499

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  +  E + +   M  +GC L   S+N LI  LC    VD+++ L              
Sbjct: 500 RNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMAL-------------- 545

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
                                L +M+ +G   +  +Y +LI  + +  K++D       M
Sbjct: 546 ---------------------LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM 584

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           +  GL PD  T  +L++GL      H   + + KL +++   D   YNILI+   K  L 
Sbjct: 585 LNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLL 644

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
             A+ LLD  +  G VP+  T G++V + V + ++
Sbjct: 645 DDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVN 679



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 223/501 (44%), Gaps = 1/501 (0%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           +  + P+  + N +L  L   +    AL  +RRM +    P + TF +  + L    R  
Sbjct: 135 RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAG 194

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D++++L  M   G   +   Y  +I  L  +  + EA  L   M  +    D  T+ +L+
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
             LC   R+ +A  +++ M+  G  P+   +  +++GLC   + DE+   L         
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV 314

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRM 433
             N ++  C   GK   A  + E M  +    D  +++I +  LC+      A  +L  M
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                 P+  TYS  +   C+   ++DA  +  Q+ A+   ++S  Y+ ++  LC+  K+
Sbjct: 375 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKL 434

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            +A  +   M   GC     ++N +IY LC    +++A  +       G      TY  +
Sbjct: 435 DQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTL 494

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +  L++  R ++ L + ++ML+ GC LDV +Y  LI+++ ++  +         MV  G+
Sbjct: 495 IHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGI 554

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+  +   L++ L    ++        ++++     D   YN LINGL K G T  A  
Sbjct: 555 KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALN 614

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           LL+ +  +   PD  T+ +L+
Sbjct: 615 LLEKLPNENVHPDIVTYNILI 635


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 223/473 (47%), Gaps = 7/473 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GFK S+ VF+ ++ +  +  R    F   Y  M + G++P ++T N LL +  + NR E+
Sbjct: 147 GFKSSI-VFDYLIKSCCDMNRADEAFECFYT-MKEKGVLPTIETCNSLLSLFLKLNRTEA 204

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   +  M +     +  TF I+I  L    ++  +   +G M   G++  +  Y  I+ 
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C   ++E A  +   M+   + PD  TY  LI+ +C+  RL++A+ I E+M+  GL P
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
           +  ++  ++ G C  G  D +  + ++      SP    +N+L+       +   A+C++
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +++ ++ I+ D  ++NI I   C     +KA+ L   M+ S + P   TY++ +    K 
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A  +F++++++ ++ D+I ++ L++G C    +  A E+   M +        +F
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N ++ G C   KV++A  L       G      ++  ++ G  +    KD   V  +ML 
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            G    V  Y  L+Q + +  +          MV  G+ PD  T  +L+ G+A
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 177/395 (44%), Gaps = 35/395 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++     +G VE  + +   M +++         SL+       R+  A ++   M
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETN 216
              G + S  ++N ++       +G  D    YK EM+K GI P + T N L+  LF   
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCN--KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQ 375

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R + A    + + +KG  P++ T+ I+I G    +    +  +  EM   GI+     YT
Sbjct: 376 RTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYT 435

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++ +L ++N+++EA  LFK + +  ++PD + +  LI+  C N  +  A ++L+DM  +
Sbjct: 436 SLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRM 495

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
            + P +  F  I++G C  GK +E                               A+ + 
Sbjct: 496 KVPPDEVTFNTIMQGHCREGKVEE-------------------------------ARELF 524

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M  R I  D  S+N  I       +I+ A+ +   M+ +   P   TY+A V G CK 
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
              + A  + +++ ++ +  D  +Y  L+EG+ +V
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 173/391 (44%), Gaps = 20/391 (5%)

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL--LECCCNAGKFFL-------AKC 394
           VF  +++  C++ + DE+      +C Y       L  +E C +    FL       A  
Sbjct: 153 VFDYLIKSCCDMNRADEAF-----ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M   +I +   ++NI I  LC+  +++KA + +G M  S V P+  TY+  V G C
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                E A  +   +  Q +  DS +Y  L+ G+C+  ++ EA ++F  M + G   S+ 
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            +N LI G C    +D A   +      G S T STY  ++  L   QR  +   ++ ++
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G + D   Y ILI         K   L  + M+ +G+ P ++T  SLLH L+  +++
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                   K+ S+  + D+ M+N LI+G         A  LL  M      PD  T   +
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 694 VGSSVGE-EIDSRRFAFDSSSF----PDSVS 719
           +     E +++  R  FD        PD +S
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHIS 538



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 195/468 (41%), Gaps = 81/468 (17%)

Query: 136 SLVFSFV-----NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           S+VF ++     +  R + A      M   G   +++  N +L   ++  R  A +V +Y
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV-LY 209

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            EM +  I  +V T N ++ VL +  +++ A D    M   G  PN  T+  ++ G  ++
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            RV+ + +IL  M    I+ +   Y  +I  +C++ +LEEA ++F+ M    L P  + Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+  C    LD A+   ++M+  G++PT   +  ++  L    + DE+   +++   
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 371 YVTSP----HNALLEC---CCNAGKFFL------------------------AKCILEKM 399
              SP    +N L+     C NA K FL                        +K    K 
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 400 AD---RKI------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           AD   +KI       D   +N  I   C N  ++ A+ELL  M    V PD  T++  + 
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSIS------------------------------- 479
           G C+    E+A  +F ++  + +  D IS                               
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569

Query: 480 ----YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
               Y+ LV+GLC+ ++   A E+   M   G +   +++  LI G+ 
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 48/349 (13%)

Query: 58  RHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           R  + PD      LI  +     L  A KIF+ + +QK  + +A  Y  +I      GN+
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           +        M+K+          SL+ +     R + A  ++  +   G       +N++
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 173 LGAI---VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           +         K+ F     ++ EM+ +GI P   T   LL VL + NR++ A D F+++ 
Sbjct: 403 INGYCRCANAKKAF----LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
            +G  P++  F  +I G  +NS V  +  +L +M  + +  +   +  I+   CRE K+E
Sbjct: 459 SEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 290 EAIRLFKMMRALDLMPDE-----------------------------------LTYEELI 314
           EA  LF  M+   + PD                                    LTY  L+
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             LC+N   D A ++L++M+  G+TP D  +  ++ G+ +V   DE+ N
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/497 (21%), Positives = 191/497 (38%), Gaps = 79/497 (15%)

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F+ +IK     +R D++      M + G+   +     ++ +  + N+ E A  L+  M 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            L +     T+  +IN LC+  +L  A D +  M   G+ P    +  IV G        
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY------- 266

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
                                   C++G+   A  IL  M  +KI  D  ++   I  +C
Sbjct: 267 ------------------------CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMC 302

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +   + +A ++   MV   + P    Y+  + G C   N + A     ++  + +     
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ L+  L   ++  EA  +   + + G S  + ++NILI G C      KA  L    
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD-------VEAYC----- 586
            +SG   T  TYT ++  L K  R K+   +  ++  EG   D       ++ +C     
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482

Query: 587 -----------------------ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
                                   ++Q    + K+++    F+ M + G+ PD  +  +L
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSM------YNILINGLWKEGLTSQASYLLDL 677
           + G +    +       +     +E+LD+        YN L+ GL K      A  LL  
Sbjct: 543 ISGYSRRGDIK------DAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 678 MLGKGWVPDATTHGLLV 694
           M+ KG  PD TT+  L+
Sbjct: 597 MVSKGMTPDDTTYFTLI 613



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%)

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           SS  F+ LI   C M + D+A          G   T  T   ++   +KL R +   V+ 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           A+M        V  + I+I  + ++ KLK    F   M  +G+ P+  T  +++HG    
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++    + +  +       DS  Y  LI+G+ K+G   +AS + + M+ KG  P A  +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 691 GLLV 694
             L+
Sbjct: 330 NTLI 333



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 6/221 (2%)

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           SI +  L++  C + +  EA E F  M + G   +  + N L+     + + + A  L +
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 537 LAYS---SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
             +      + YT +    ++    KL++AKD +     M   G   ++  Y  ++    
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV---GHMETSGVKPNIVTYNTIVHGYC 267

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
              +++        M +  + PD  T  SL+ G+    +L   S    ++V       + 
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +YN LI+G   +G    AS   D ML KG  P  +T+  L+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 152/652 (23%), Positives = 281/652 (43%), Gaps = 46/652 (7%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           + S    ++E +++ L  +L P  +  VL +  D   AL  F W   Q R+ H    Y  
Sbjct: 146 LSSAWNPNFEGRLRHLLRSLKPPLVCAVLRSQADERVALNFFYWADRQWRYSHHPVVYYT 205

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+       +V     LCQ                            GA RVL  M   G
Sbjct: 206 ML-------DVLSKTKLCQ----------------------------GARRVLRLMTRRG 230

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
            +   + F  V+ +     +   + + V   M KAG+ P++   N  + VL +  ++E A
Sbjct: 231 IECPPEAFGYVMVSYSRAGK-LRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKA 289

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           L    RM   G  P+  T+  +IKG    +R++D++ ++  +   G   +   Y  ++  
Sbjct: 290 LKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 349

Query: 282 LCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           LC+E K+EE   L  KM+   +L+PD++TY  LI+ L ++   DDA   L++    G   
Sbjct: 350 LCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHI 409

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  IV   C+ G+ DE+ + + D      +P    + A+++  C  G+   AK IL
Sbjct: 410 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKIL 469

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M       +  S+   +  LC + +  +A E++         P+  TY A + G  + 
Sbjct: 470 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRRE 529

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF-CCMSKNGCSLSSSS 514
               +A  + R++  +      +  + L++ LCQ +K+ EA +    C++K GC+++  +
Sbjct: 530 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNK-GCAINVVN 588

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           F  +I+G C +  ++ A+ +    Y SG      TYT +   L K  R  +   ++ +ML
Sbjct: 589 FTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKML 648

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G       Y  +I   S+  ++ D       M+K    P R     ++  L D   L 
Sbjct: 649 SKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLE 706

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                + K++  +  +D++  ++L+    K+G+   A  +   M  +   PD
Sbjct: 707 EAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPD 758



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/486 (22%), Positives = 209/486 (43%), Gaps = 35/486 (7%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
           +L+VL +T   + A    R M ++G  CP    F  V+       ++ +++ +L  M   
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECP-PEAFGYVMVSYSRAGKLRNALRVLTLMQKA 264

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  LS     I +L +  KLE+A++  + M+   + PD +TY  LI   C+  R++DA
Sbjct: 265 GVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDA 324

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
            +++  +   G  P    +  ++  LC+  K +E                          
Sbjct: 325 LELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEE-------------------------- 358

Query: 387 GKFFLAKCILEKMA--DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                 KC++EKM      I D  ++N  I  L ++     A   L          D   
Sbjct: 359 -----VKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVG 413

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YSA V   C+    ++A  +   + ++    D ++Y+ +V+G C++ +I EA ++   M 
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMY 473

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           K+GC  ++ S+  L+ GLC   K  +A  + +++     +    TY  +M GL +  +  
Sbjct: 474 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLS 533

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           +   +  +M+ +G         +LIQS+ +  K+ +   +    +  G   +     +++
Sbjct: 534 EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVI 593

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           HG      +    S ++ +    +  D+  Y  L + L K+G   +A+ L+  ML KG  
Sbjct: 594 HGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLD 653

Query: 685 PDATTH 690
           P   T+
Sbjct: 654 PTPVTY 659



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 7/290 (2%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I  L +  ++ KA + L RM V+ + PD  TY++ + G C L   EDAL +   + +
Sbjct: 274 NTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPS 333

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK----NGCSLSSSSFNILIYGLCVMR 526
           +    D +SY  ++  LC+ +KI E   V C M K    +       ++N LI+ L    
Sbjct: 334 KGCPPDKVSYYTVMGFLCKEKKIEE---VKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHG 390

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
             D A+     A   G       Y+ I+    +  R  +   ++  M   GC  DV  Y 
Sbjct: 391 HADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYT 450

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            ++       ++ +       M K G  P+  +  +LL+GL    +       IN     
Sbjct: 451 AIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEH 510

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               ++  Y  +++GL +EG  S+A  L   M+ KG+ P      LL+ S
Sbjct: 511 WWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 6/303 (1%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++R A  +L  M  + V P  +  +  +    K    E AL+   ++    +  D ++Y+
Sbjct: 250 KLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYN 309

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYS 540
            L++G C + +I +A+E+   +   GC     S+  ++  LC  +K+++    +  + ++
Sbjct: 310 SLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWN 369

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           S       TY  ++  L K   A D L  L +   +G  +D   Y  ++ S  ++ ++ +
Sbjct: 370 SNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDE 429

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                  M   G  PD  T  +++ G     ++      + ++       ++  Y  L+N
Sbjct: 430 AKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLN 489

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSSSFP 715
           GL   G + +A  ++++     W P+A T     HGL     + E  D  R   +   FP
Sbjct: 490 GLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFP 549

Query: 716 DSV 718
             V
Sbjct: 550 TPV 552



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 10/224 (4%)

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           +LD +S +KL +G         A  V   M++ G      +F  ++       K+  A+R
Sbjct: 206 MLDVLSKTKLCQG---------ARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALR 256

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           + +L   +G   + S     +  LVK  + +  L  L +M V G   D+  Y  LI+   
Sbjct: 257 VLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYC 316

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL-DS 652
           + N+++D       +   G  PD+ +  +++  L    ++  V   + K+V +S ++ D 
Sbjct: 317 DLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQ 376

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             YN LI+ L K G    A   L     KG+  D   +  +V S
Sbjct: 377 VTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHS 420


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 242/534 (45%), Gaps = 48/534 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F VV G     +   AD + V  EM   G  P     + +LE    +    +++     M
Sbjct: 115 FPVVRGLCTRGR--IADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
           H KGC  ++    +V+  +     VD++V +L ++   G + ++  Y  ++  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +   L   M  +D  P+ +T+  LI  LC N   +  +++L  M   G TP   ++  I
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G+C+ G  + +   L     Y   P    +N +L+  C+A ++  A+ +L +M  +  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-- 350

Query: 405 ADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
            DC     ++NI + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++
Sbjct: 351 -DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ + + +S+     +++SY+ +++GLC   +  +A E+   M + GC  +  +FN LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC    V++AI L                                   L QMLV GC+ 
Sbjct: 470 FLCKKGLVEQAIEL-----------------------------------LKQMLVNGCSP 494

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ +Y  +I  + +  K ++     NVMV  G+ P+     S+   L+   +++ V    
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +   +   D+ +YN +I+ L K   T +A      M+  G +P+ +T+ +L+
Sbjct: 555 DNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 206/436 (47%), Gaps = 6/436 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A+ +L  +   G +  +  +N VL  +   KR + D   +  EMV+    PN+ T N
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR-WGDVEELMDEMVRVDCAPNIVTFN 255

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L      E   +   +M + GC P+ R +  +I G+     ++ +  IL  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  Y  ++  LC   + +EA  L   M   D   D++T+  L++  C+N  +D  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLEC 382
            ++LE M+  G  P    +  ++ G C+ G  DE+V  L+      C   T  +  +L+ 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C+AG++  A+ ++ +M  +       ++N  I +LC+   + +A ELL +M+V+   PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +YS  + G  K    E+AL +   +  + +  ++I YS +   L +  ++ + +++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            +        +  +N +I  LC   + D+AI   +   S+G     STYT ++ GL    
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 562 RAKDLLVVLAQMLVEG 577
            AK+   +L+++   G
Sbjct: 616 LAKEAQELLSELCSRG 631



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/399 (21%), Positives = 162/399 (40%), Gaps = 40/399 (10%)

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFL 391
           + + P    F  +VRGLC  G+  +++  L++     C  +   ++ +LE  C +G F  
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           +  +LE M  +    D  + N+ +  +CE   + +A  LL ++       D  +Y+A + 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C    + D   +  ++       + ++++ L+  LC+        EV   MS++GC+ 
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD----- 565
               +  +I G+C    ++ A  + +   S G       Y  ++ GL   +R K+     
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 566 ------------------------------LLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                                         ++ +L QML  GC  DV  Y  +I    ++
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             + +  +    M   G  P+  +   +L GL    +       +++++      +   +
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N LIN L K+GL  QA  LL  ML  G  PD  ++  ++
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 118 LCQNMVKERYPNVREALIS------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
            CQN + +R   + E ++S            ++  F     ++ A+ +L +M+S G K +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              + +VL  +    R + D   +  +M++ G  PN  T N L+  L +   +E A++  
Sbjct: 426 TVSYTIVLKGLCSAGR-WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M   GC P+  ++  VI GL    + ++++ +L  M + GI      Y+ I   L RE
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++ + I++F  ++   +  D + Y  +I+ LC+    D A D    M+  G  P +  +
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 346 VDIVRGLCEVGKFDESVNFLEDKC 369
             +++GL   G   E+   L + C
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELC 628



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 3/247 (1%)

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+A V G C+      A R+   V       ++ ++  +V GLC   +I +A+EV   M
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPP---NAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           S  GC+     +++++   C       ++R+    ++ G +  T     ++  + +    
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            + + +L ++   GC  D+ +Y  +++ +    +  D     + MV+    P+  T  +L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  L        V   + ++       D  MY  +I+G+ KEG    A+ +L+ M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 684 VPDATTH 690
            P+   +
Sbjct: 318 KPNVVCY 324


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 242/534 (45%), Gaps = 48/534 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F VV G     +   AD + V  EM   G  P     + +LE    +    +++     M
Sbjct: 115 FPVVRGLCTRGR--IADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
           H KGC  ++    +V+  +     VD++V +L ++   G + ++  Y  ++  LC   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +   L   M  +D  P+ +T+  LI  LC N   +  +++L  M   G TP   ++  I
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G+C+ G  + +   L     Y   P    +N +L+  C+A ++  A+ +L +M  +  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-- 350

Query: 405 ADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
            DC     ++NI + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++
Sbjct: 351 -DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ + + +S+     +++SY+ +++GLC   +  +A E+   M + GC  +  +FN LI 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            LC    V++AI L                                   L QMLV GC+ 
Sbjct: 470 FLCKKGLVEQAIEL-----------------------------------LKQMLVNGCSP 494

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+ +Y  +I  + +  K ++     NVMV  G+ P+     S+   L+   +++ V    
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF 554

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +   +   D+ +YN +I+ L K   T +A      M+  G +P+ +T+ +L+
Sbjct: 555 DNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 206/436 (47%), Gaps = 6/436 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A+ +L  +   G +  +  +N VL  +   KR + D   +  EMV+    PN+ T N
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR-WGDVEELMDEMVRVDCAPNIVTFN 255

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L      E   +   +M + GC P+ R +  +I G+     ++ +  IL  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  Y  ++  LC   + +EA  L   M   D   D++T+  L++  C+N  +D  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLEC 382
            ++LE M+  G  P    +  ++ G C+ G  DE+V  L+      C   T  +  +L+ 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C+AG++  A+ ++ +M  +       ++N  I +LC+   + +A ELL +M+V+   PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +YS  + G  K    E+AL +   +  + +  ++I YS +   L +  ++ + +++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            +        +  +N +I  LC   + D+AI   +   S+G     STYT ++ GL    
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 562 RAKDLLVVLAQMLVEG 577
            AK+   +L+++   G
Sbjct: 616 LAKEAQELLSELCSRG 631



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/399 (21%), Positives = 162/399 (40%), Gaps = 40/399 (10%)

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFL 391
           + + P    F  +VRGLC  G+  +++  L++     C  +   ++ +LE  C +G F  
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           +  +LE M  +    D  + N+ +  +CE   + +A  LL ++       D  +Y+A + 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C    + D   +  ++       + ++++ L+  LC+        EV   MS++GC+ 
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD----- 565
               +  +I G+C    ++ A  + +   S G       Y  ++ GL   +R K+     
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 566 ------------------------------LLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                                         ++ +L QML  GC  DV  Y  +I    ++
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             + +  +    M   G  P+  +   +L GL    +       +++++      +   +
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N LIN L K+GL  QA  LL  ML  G  PD  ++  ++
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 118 LCQNMVKERYPNVREALIS------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
            CQN + +R   + E ++S            ++  F     ++ A+ +L +M+S G K +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              + +VL  +    R + D   +  +M++ G  PN  T N L+  L +   +E A++  
Sbjct: 426 TVSYTIVLKGLCSAGR-WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M   GC P+  ++  VI GL    + ++++ +L  M + GI      Y+ I   L RE
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++ + I++F  ++   +  D + Y  +I+ LC+    D A D    M+  G  P +  +
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 346 VDIVRGLCEVGKFDESVNFLEDKC 369
             +++GL   G   E+   L + C
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELC 628



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 3/247 (1%)

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+A V G C+      A R+   V       ++ ++  +V GLC   +I +A+EV   M
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPVPP---NAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           S  GC+     +++++   C       ++R+    ++ G +  T     ++  + +    
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            + + +L ++   GC  D+ +Y  +++ +    +  D     + MV+    P+  T  +L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  L        V   + ++       D  MY  +I+G+ KEG    A+ +L+ M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 684 VPDATTH 690
            P+   +
Sbjct: 318 KPNVVCY 324


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 243/556 (43%), Gaps = 29/556 (5%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V  K  +   + ++K+    G  P++ TLN L+        I  A      +
Sbjct: 66  FNYILSSLVNNKH-YPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANI 124

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  PN+ T   +IKGL     +  ++    ++   G QL    Y  +I  LC+  + 
Sbjct: 125 LKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGET 184

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +   RL + +    + PD + Y  +I+ LC+N  L DA D+  +MIV G++P    +  +
Sbjct: 185 KAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNAL 244

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           V G C +G   E+ + L +      +P     N L++     GK   AK +L  M    I
Sbjct: 245 VYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACI 304

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N  I       +++ A  +   M  S V P+  TY+  + G CK    ++A+ 
Sbjct: 305 KPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMS 364

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  ++++ D ++Y+ L++GLC+   +  A+ +   M + G      S+ IL+  LC
Sbjct: 365 LFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALC 424

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              +++ A          G      TY  ++ GL K     + + + ++M  +GC  D  
Sbjct: 425 KGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAI 484

Query: 584 AYCILIQSMSEQN-----------------------KLKDCALFFNVMVKAGLVPDRETM 620
            +  +I ++ E++                       +LK+  +   VM KA + PD  T 
Sbjct: 485 TFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTY 544

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +L+ G    ++L         +       +   Y I+I+GL K+    +A  L + M  
Sbjct: 545 GTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKH 604

Query: 681 KGWVPDATTHGLLVGS 696
           K   P+  T+  L+ +
Sbjct: 605 KNMFPNIVTYTSLIDA 620



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 228/500 (45%), Gaps = 13/500 (2%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           +VK   PNV     +LV+ F     +  A  +L  M        V  FN ++ A+ +E +
Sbjct: 230 IVKGISPNVV-TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
             A  + V   M+KA I P+V T N L++  F  N++++A   F  M + G  PN RT+ 
Sbjct: 289 MKAAKI-VLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYT 347

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I GL     VD+++S+  EM    +  ++  YT +I  LC+ + LE AI L K M+  
Sbjct: 348 TMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 407

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + PD  +Y  L++ LC+  RL++A +  + ++V G       +  ++ GLC+   F E+
Sbjct: 408 GIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEA 467

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
           ++      G           C  +A  F    C L +  +   A+     +  R L E  
Sbjct: 468 MDLKSKMEGK---------GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEAR 518

Query: 422 EIR--KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           ++R  +A  +L  M  + + PD  TY   + G   +   + A  VF  ++   +  +   
Sbjct: 519 KVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQC 578

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ +++GLC+ + + EA+ +F  M       +  ++  LI  LC    +++AI L     
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G      +YT ++ GL K  R +    +  ++LV+G  L+V+ Y  +I  + +     
Sbjct: 639 EHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFD 698

Query: 600 DCALFFNVMVKAGLVPDRET 619
           +       M   G +PD  T
Sbjct: 699 EALDLQXKMEDKGCMPDAVT 718



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 115/512 (22%), Positives = 216/512 (42%), Gaps = 37/512 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  ++    + G+++E   L   M +K   P+V     +L+ +     ++  A  VL  
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVC-TFNTLIDALGKEGKMKAAKIVLAV 298

Query: 157 MNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M     K  V  +N ++ G     K   A +VF    M ++G+ PNV T   +++ L + 
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY--SMAQSGVTPNVRTYTTMIDGLCKE 356

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             ++ A+  F  M  K   P+  T+  +I GL  N  ++ ++++  +M + GIQ ++  Y
Sbjct: 357 KMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 416

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T ++  LC+  +LE A   F+ +       +  TY  +IN LC+     +A D+   M  
Sbjct: 417 TILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEG 476

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---------------------------- 367
            G  P    F  I+  L E  + D++   L +                            
Sbjct: 477 KGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKAC 536

Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            K   VT  +  L++      +   AK +   MA   +  +   + I I  LC+ + + +
Sbjct: 537 IKPDVVT--YGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L   M   ++ P+  TY++ +   CK  + E A+ + +++    +  D  SY+ L++
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC+  ++  A E+F  +   G  L+   +  +I  LC     D+A+ L+      G   
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
              T+  I+  L +         +L +M+  G
Sbjct: 715 DAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/432 (21%), Positives = 180/432 (41%), Gaps = 36/432 (8%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           N + +A  +F +   Q        TY  MI  L     V+E   L + M   +Y N+   
Sbjct: 322 NKVKNAKYVF-YSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM---KYKNMIPD 377

Query: 134 LI---SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           ++   SL+     ++ +  A+ +   M   G +  V  + ++L A+ +  R      F  
Sbjct: 378 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQ 437

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + +VK G   NV T N ++  L + +    A+D   +M  KGC P++ TF+ +I  L   
Sbjct: 438 RLLVK-GYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEK 496

Query: 251 SRVDDSVSILGEMFDLGIQ-------------LELSFYTCIIPMLCRE----------NK 287
              D +  IL EM   G+Q             L +    CI P +             N+
Sbjct: 497 DENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNE 556

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+ A  +F  M  + + P+   Y  +I+ LC+   +D+A  + E+M    + P    +  
Sbjct: 557 LKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTS 616

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++  LC+    + ++  L++   +   P    +  LL+  C +G+   AK I +++  + 
Sbjct: 617 LIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKG 676

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              +   +   I  LC+     +A +L  +M     +PD  T+   +    +    + A 
Sbjct: 677 YHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAE 736

Query: 463 RVFRQVSAQSLV 474
           ++  ++ A+ L+
Sbjct: 737 KILXEMIARGLM 748



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 122/320 (38%), Gaps = 36/320 (11%)

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  + NI +   C    I  A+ +L  ++     P+  T +  + G C     + AL  
Sbjct: 96  PDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYF 155

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             QV AQ   L+ +SY  L+ GLC+  +      +   +  +        +N +I+ LC 
Sbjct: 156 HDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK 215

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
            + +  A  L S     G S    TY  ++ G   +   K+   +L +M ++    DV  
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCT 275

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           +  LI ++ ++ K+K   +   VM+KA + PD  T                         
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVT------------------------- 310

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE-ID 703
                     YN LI+G +       A Y+   M   G  P+  T+  ++     E+ +D
Sbjct: 311 ----------YNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 704 SRRFAFDSSSFPDSVSDILA 723
                F+   + + + DI+ 
Sbjct: 361 EAMSLFEEMKYKNMIPDIVT 380


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 219/513 (42%), Gaps = 47/513 (9%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+++ + PNV T N L+        ++  L  F  M + GC PN  T+  +I       R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D++  +L  M   G+Q  L  Y  II  LCRE  ++EA  + + M      PDE+TY  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+N  C+      A  I  +M+  G++P+   +  ++  +C+    + ++ F        
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF-------- 172

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLG 431
                                   ++M  R +   + ++   I        + +AY +L 
Sbjct: 173 -----------------------FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 209

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M  S   P   TY+AF+ G C L   E+AL V +++  + L  D +SYS ++ G C+  
Sbjct: 210 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++  A ++   M + G S  + +++ LI GLC MR++ +A  L       G      TYT
Sbjct: 270 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 329

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++            L +  +M+ +G   D   Y +LI  +++Q + ++       ++  
Sbjct: 330 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 389

Query: 612 GLVP---------------DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
             VP               + +++++L+ G      +H        +V  +     ++YN
Sbjct: 390 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 449

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           ++I+G  + G   +A  L   M+  G+VP   T
Sbjct: 450 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVT 482



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 214/493 (43%), Gaps = 29/493 (5%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           + EM + G +PNV T N L++   +  RI+ A    + M  KG  PN  ++ ++I GL  
Sbjct: 33  FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 92

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              + ++  IL EM   G   +   Y  ++   C+E    +A+ +   M    + P  +T
Sbjct: 93  EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 152

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  LIN +C+   L+ A +  + M + GL P +  +  ++ G    G  +E+   L +  
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
               SP    +NA +   C   +   A  ++++M ++ +A D  S++  I   C   E+ 
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+++   MV   V PD  TYS+ + G C++    +A  + +++    L  D  +Y+ L+
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              C    + +A+ +   M   G    + ++++LI GL    +  +A RL          
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL---------- 382

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLV-VLAQMLVEGCA-LDVEAYCILIQSMSEQNKLKDCA 602
                       L KL   + +   V    L+E C+ ++ ++   LI+    +  + +  
Sbjct: 383 ------------LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  MV+    P       ++HG   G  L    +   +++    V  +     LI  L
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490

Query: 663 WKEGLTSQASYLL 675
           +KEG+  + S ++
Sbjct: 491 FKEGMNEEMSEVI 503



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 209/487 (42%), Gaps = 41/487 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALIS---LVFSFVNHYRVNGAMR 152
           D YCKM       G ++E  GL ++M  K   PN    LIS   ++        +  A  
Sbjct: 53  DAYCKM-------GRIDEAFGLLKSMSSKGMQPN----LISYNVIINGLCREGSMKEAWE 101

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           +L  M   GF      +N +L    +E   F   + ++ EMV+ G+ P+V T   L+  +
Sbjct: 102 ILEEMGYKGFTPDEVTYNTLLNGYCKEGN-FHQALVIHAEMVRNGVSPSVVTYTALINSM 160

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +   +  A++ F +M  +G  PN RT+  +I G      ++++  IL EM + G    +
Sbjct: 161 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y   I   C   ++EEA+ + + M    L PD ++Y  +I+  C    LD A  + ++
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 280

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           M+  G++P    +  +++GLCE+ +  E+ +  ++       P    +  L+   C  G 
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340

Query: 389 FFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  + ++M  +  + D  ++++ I  L +    R+A  LL +++    VP   TY  
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 400

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +       N E     F+ V A            L++G C    + EA  VF  M +  
Sbjct: 401 LIE---NCSNIE-----FKSVVA------------LIKGFCMKGLMHEADRVFESMVERN 440

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                + +N++I+G C    + KA  L      SG    T T   ++  L K    +++ 
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 500

Query: 568 VVLAQML 574
            V+   L
Sbjct: 501 EVIGDTL 507



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 175/395 (44%), Gaps = 5/395 (1%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+  TY  LI   C    L        +M   G  P    +  ++   C++G+ DE+   
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L+        P    +N ++   C  G    A  ILE+M  +    D  ++N  +   C+
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
                +A  +   MV + V P   TY+A +   CK  N   A+  F Q+  + L  +  +
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G  +   + EA  +   M+++G S S  ++N  I+G CV+ ++++A+ +     
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G +    +Y+ I+ G  +         +  +M+ +G + D   Y  LIQ + E  +L 
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +       M+  GL PD  T  +L++       L+      ++++    + D+  Y++LI
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           NGL K+  T +A  LL  ++ +  VP   T+  L+
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 204/444 (45%), Gaps = 5/444 (1%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K G  P+  T + L+       R+  A+    RM +    P+  T   +I GL    RV 
Sbjct: 162 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 221

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +++ ++  M + G Q +   Y  ++  LC+      A+ LF+ M   ++    + Y  +I
Sbjct: 222 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 281

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           + LC++   DDA  +  +M + G+      +  ++ GLC  GK+D+    L +  G    
Sbjct: 282 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341

Query: 375 PH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL 429
           P     +AL++     GK   AK +  +M  R IA D  ++N  I   C+   + +A ++
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              MV     PD  TYS  +   CK    +D +R+FR++S++ L+ ++I+Y+ LV G CQ
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             K+  A E+F  M   G   S  ++ IL+ GLC   +++KA+ +      S  +     
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  I+ G+    +  D   +   +  +G   DV  Y ++I  + ++  L +  + F  M 
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581

Query: 610 KAGLVPDRETMLSLLHGLADGSQL 633
           + G  PD  T   L+     GS L
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGL 605



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/548 (23%), Positives = 247/548 (45%), Gaps = 22/548 (4%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + +++ M+++  +P     N L   +  T + +  L   + M   G   +  T  I+I
Sbjct: 82  DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 141

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  ++  + S+LG  + LG + +   ++ ++   C E ++ EA+ L   M  +   
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +T   LIN LC   R+ +A  +++ M+  G  P +  +  ++  LC+ G    +++ 
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261

Query: 365 L----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
                E         ++ +++  C  G F  A  +  +M  + I AD  +++  I  LC 
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           + +     ++L  M+  +++PD  T+SA +    K     +A  ++ ++  + +  D+I+
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 381

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G C+   + EA ++F  M   GC     +++ILI   C  ++VD  +RL     
Sbjct: 382 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 441

Query: 540 SSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           S G    T TY  ++LG     KL  AK+L     +M+  G    V  Y IL+  + +  
Sbjct: 442 SKGLIPNTITYNTLVLGFCQSGKLNAAKELF---QEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +L      F  M K+ +         ++HG+ + S++    S    L       D   YN
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 558

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-----------EEIDSR 705
           ++I GL K+G  S+A  L   M   G  PD  T+ +L+ + +G           EE+   
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 618

Query: 706 RFAFDSSS 713
            F+ DSS+
Sbjct: 619 GFSADSST 626



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 219/512 (42%), Gaps = 20/512 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           YKE ++ GIV                 ++  A+D F  M +    P    F  +   +  
Sbjct: 67  YKERLRNGIV---------------DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVAR 111

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             + D  +     M   GI+ ++   T +I   CR+ KL  A  +      L   PD +T
Sbjct: 112 TKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT 171

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           +  L+N  C   R+ +A  +++ M+ +   P       ++ GLC  G+  E++  ++   
Sbjct: 172 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 231

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
            Y   P    +  +L   C +G   LA  +  KM +R I A    ++I I  LC++    
Sbjct: 232 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 291

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  L   M +  +  D  TYS+ + G C    ++D  ++ R++  ++++ D +++S L+
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +   +  K+ EA E++  M   G +  + ++N LI G C    + +A ++  L  S G  
Sbjct: 352 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 411

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY+ ++    K +R  D + +  ++  +G   +   Y  L+    +  KL      
Sbjct: 412 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 471

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  MV  G+ P   T   LL GL D  +L+       K+      L   +YNI+I+G+  
Sbjct: 472 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 531

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                 A  L   +  KG  PD  T+ +++G 
Sbjct: 532 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 5/393 (1%)

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           +L+Y+E +     +++++DA D+ E MI     PT   F  +   +    ++D  + F +
Sbjct: 64  KLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 123

Query: 367 ----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
               +   +       ++ C C   K   A  +L +        D  +++  +   C   
Sbjct: 124 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 183

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + +A  L+ RMV     PD  T S  + G C      +AL +  ++       D ++Y 
Sbjct: 184 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 243

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC+      A+++F  M +     S   ++I+I  LC     D A+ L +     
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      TY+ ++ GL    +  D   +L +M+      DV  +  LI    ++ KL + 
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              +N M+  G+ PD  T  SL+ G    + LH  +   + +VS     D   Y+ILIN 
Sbjct: 364 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             K         L   +  KG +P+  T+  LV
Sbjct: 424 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 13/288 (4%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           F   +DVF V  G ++E K        +Y EM+  GI P+  T N L++   + N +  A
Sbjct: 347 FSALIDVF-VKEGKLLEAKE-------LYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 398

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
              F  M  KGC P+  T+ I+I       RVDD + +  E+   G+      Y  ++  
Sbjct: 399 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 458

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C+  KL  A  LF+ M +  + P  +TY  L++ LC+N  L+ A +I E M    +T  
Sbjct: 459 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
             ++  I+ G+C   K D++ +           P    +N ++   C  G    A  +  
Sbjct: 519 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 578

Query: 398 KMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           KM +      D ++NI IR       +  + EL+  M V     D +T
Sbjct: 579 KMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 626


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 144/649 (22%), Positives = 285/649 (43%), Gaps = 57/649 (8%)

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSF---VNHYRVNGAMR------ 152
           MI K+ L   V  +  L   +VK R+  +   L + + S     + Y   G +R      
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241

Query: 153 -------VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
                  ++ +M + G  +++  +NV++  + ++++ + + V + K++    + P+V T 
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW-EAVGIKKDLAGKDLKPDVVTY 300

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L+  L +    E  L+    M      P+      +++GL    +++++++++  + D
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G+   L  Y  +I  LC+  K  EA  LF  M  + L P+++TY  LI+  C   +LD 
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A   L +M+  GL  +   +  ++ G C+ G    +  F+ +       P    + +L+ 
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480

Query: 382 CCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C+ GK   A  +  +M  + IA    ++   +  L     IR A +L   M   +V P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  TY+  + G C+  +   A    ++++ + +V D+ SY  L+ GLC   + +EA    
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             + K  C L+   +  L++G C   K+++A+ +       G       Y  ++ G +K 
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           +  K    +L +M   G   D   Y  +I + S+    K+    +++M+  G VP+  T 
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720

Query: 621 LSLLHGLADG----------SQLHLVSSGINK--------LVSDSEV------------- 649
            ++++GL             S++  VSS  N+        +++  EV             
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780

Query: 650 ----LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                +++ YN+LI G  ++G   +AS L+  M+G G  PD  T+  ++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 137/617 (22%), Positives = 261/617 (42%), Gaps = 83/617 (13%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           F++++   V  +R   D V V+K M+ K  ++P V TL+ LL  L +      A++ F  
Sbjct: 159 FDLLIQHYVRSRR-VLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M   G  P+   +  VI+ L     +  +  ++  M   G  + +  Y  +I  LC++ K
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           + EA+ + K +   DL PD +TY  L+  LC+    +   +++++M+ +  +P++     
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           +V GL + GK +E++N ++    +  SP    +NAL++  C   KF  A+ + ++M    
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397

Query: 404 IADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVV----------------------- 439
           +   D +++I I   C   ++  A   LG MV + +                        
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457

Query: 440 ------------PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ---------------- 471
                       P   TY++ + G C       ALR++ +++ +                
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517

Query: 472 ---SLVLDS----------------ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
               L+ D+                ++Y+ ++EG C+   +++A E    M++ G    +
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            S+  LI+GLC+  +  +A       +          YT ++ G  +  + ++ L V  +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV---MVKAGLVPDRETMLSLLHGLAD 629
           M+  G  LD+  Y +LI       K KD  LFF +   M   GL PD     S++   + 
Sbjct: 638 MVQRGVDLDLVCYGVLIDG---SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                      + ++++  V +   Y  +INGL K G  ++A  L   M     VP+  T
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754

Query: 690 HGLLVGSSVGEEIDSRR 706
           +G  +      E+D ++
Sbjct: 755 YGCFLDILTKGEVDMQK 771



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/575 (21%), Positives = 251/575 (43%), Gaps = 53/575 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TYC ++  L      E    +   M+  R+     A+ SLV       ++  A+ ++  +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G   ++ V+N ++ ++ +  R F +   ++  M K G+ PN  T + L+++     +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCK-GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417

Query: 218 IESALDQFRRMHKKGC--------------C---------------------PNSRTFEI 242
           +++AL     M   G               C                     P   T+  
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ G  +  +++ ++ +  EM   GI   +  +T ++  L R   + +A++LF  M   +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + P+ +TY  +I   CE   +  A + L++M   G+ P    +  ++ GLC  G+  E+ 
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 363 NFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
            F++      C      +  LL   C  GK   A  + ++M  R +  D   + + I   
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            ++++ +  + LL  M    + PD   Y++ +  K K  ++++A  ++  +  +  V + 
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG--LCVMRK----VDKA 531
           ++Y+ ++ GLC+   + EA EV C   +      SS  N + YG  L ++ K    + KA
Sbjct: 718 VTYTAVINGLCKAGFVNEA-EVLCSKMQP----VSSVPNQVTYGCFLDILTKGEVDMQKA 772

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L + A   G    T+TY  ++ G  +  R ++   ++ +M+ +G + D   Y  +I  
Sbjct: 773 VELHN-AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 831

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           +  +N +K     +N M + G+ PDR    +L+HG
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 209/454 (46%), Gaps = 18/454 (3%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G++   EG    M+ ++         SL+  + +  ++N A+R+   M   G   S+  F
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             +L  +        D V ++ EM +  + PN  T N ++E   E   +  A +  + M 
Sbjct: 511 TTLLSGLFRAGL-IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           +KG  P++ ++  +I GL    +  ++   +  +     +L    YT ++   CRE KLE
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629

Query: 290 EAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           EA+ + + M  R +DL  D + Y  LI+   ++        +L++M   GL P D ++  
Sbjct: 630 EALSVCQEMVQRGVDL--DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687

Query: 348 IVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD-R 402
           ++    + G F E+       + + C      + A++   C AG    A+ +  KM    
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747

Query: 403 KIADCDSWNIPIRWLCENE-EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            + +  ++   +  L + E +++KA EL    ++  ++ + ATY+  + G C+    E+A
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEA 806

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             +  ++    +  D I+Y+ ++  LC+   + +A+E++  M++ G      ++N LI+G
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866

Query: 522 LCVMRKVDKAIRLRSLAYSSG------TSYTTST 549
            CV  ++ KA  LR+     G      TS TT++
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 232/502 (46%), Gaps = 2/502 (0%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRV 253
           + G+ P+  + N +L VL   +    AL  +RRM H+    P + TF +  + L    R 
Sbjct: 132 RFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           ++++++L  M   G   +   Y  +I  LC +  + EA  L   M  +    D  T++++
Sbjct: 192 NEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           +  +C   R+ +A  +++ M+  G  P    +  +++GLC V + DE+   L        
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV 311

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
              N ++  C   GK   A  + E M  +    D  +++I +  LC+   I  A  LL  
Sbjct: 312 VLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLRE 371

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M      P+  TY+  +   CK   ++D   +  ++SA+ L L+S  Y+ ++  LC+  +
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA+ +   M   GC+    S+N +IY LC   ++++A  +       G      TY  
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 491

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           I+  L++  R +D + +  +M++ GC+LDV +Y  LI++M +   +    +    M + G
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           + P+  +   L+  L    ++        ++++     D   YN LINGL K G    A 
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            LL+ +  +   PD  T+ +L+
Sbjct: 612 NLLEKLHNENVHPDIITYNILI 633



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 175/340 (51%), Gaps = 6/340 (1%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           +L+V +FN V+G  + E +  A+   +Y+ M   G  P+  T + L+  L +  RI SA+
Sbjct: 308 ELNVVLFNTVIGGCLAEGK-LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              R M KKG  PN  T+ IV+     N   DD+ ++L EM   G+ L    Y  +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++ +++EA+ L + MR+    PD  +Y  +I  LC N ++++A  + E+++  G+    
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
             +  I+  L   G++ ++V   ++     C      +N L++  C  G    +  +LE+
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 399 MADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           MA++ I   + S+NI I  LC+   +R A EL  +M+   + PD  TY+  + G CK+  
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
              AL +  ++  +++  D I+Y+ L+   C+V  + +A 
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/471 (21%), Positives = 210/471 (44%), Gaps = 37/471 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R N A+ +L  M   G      ++  V+ A+ ++  G  +   +  EM+  G   +V+T 
Sbjct: 190 RANEALALLRGMARHGCVPDAVLYQTVIHALCDQG-GVTEAATLLNEMLLMGCAADVNTF 248

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++  +    R+  A     RM  KGC P   T+  +++GL    + D++ ++LG + +
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE 308

Query: 266 L-------------------------------GIQLELSFYTCIIPMLCRENKLEEAIRL 294
           L                               G Q +   Y+ ++  LC+  ++  A+RL
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            + M      P+ +TY  +++  C+N   DD   +LE+M   GLT     +  ++  LC+
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
            G+ DE++  +++      +P    +N ++   CN  +   A+ + E + +  + A+  +
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I  L  +   + A  L   M++     D  +Y+  +   CK  N + +L +  +++
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + +  +++SY+ L+  LC+  ++ +A+E+   M   G +    ++N LI GLC M  + 
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            A+ L    ++        TY  ++    K++   D  ++L + +   C +
Sbjct: 609 AALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPV 659



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 40/289 (13%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA-TYSAFVLGKCKLCNYEDALRVFRQ 467
           S+N+ +  L   +    A  L  RMV    VP    T+       C+L    +AL + R 
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRG 200

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++    V D++ Y  ++  LC    +TEA  +   M   GC+   ++F+ ++ G+C + +
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           V +A RL     + G      TY  ++ GL ++++A +   +L ++      L+V  +  
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP----ELNVVLFNT 316

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I     + KL +    +  M   G  PD  T                            
Sbjct: 317 VIGGCLAEGKLAEATELYETMGLKGCQPDAHT---------------------------- 348

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                  Y+IL++GL K G  S A  LL  M  KG+ P+  T+ +++ S
Sbjct: 349 -------YSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHS 390


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 220/500 (44%), Gaps = 34/500 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  EM K  + P+V T N L++  F    +++A+     M  +G  P   T+  V+KGL 
Sbjct: 179 VISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLC 238

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + R D +  +   M    +  ++  +  +I   CR  +++EA++ +K M+   + PD +
Sbjct: 239 KHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVV 298

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           ++  LI        +D A   L +M  +GL P   ++  ++ G C  G   E++   ++ 
Sbjct: 299 SFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            G+   P                              D  ++N  +  LC+   +  A +
Sbjct: 359 VGFGCLP------------------------------DVVTYNTLLNGLCKQHRLLDAEK 388

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL  M    V PD  T++  + G C+  N+E+AL++F  +  Q L  D ++Y+ L++G+C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   + +A E++  M       +  +++ILI   C   +V+ A          G      
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  I+ G  +    K     L +M  +    D+  +  LI    ++  +      FN+M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM 568

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVSDSEV-LDSSMYNILINGLWKEG 666
            K  + PD  T   +++G ++  Q ++  +G + K + DS +  D   Y  LING    G
Sbjct: 569 EKEMVRPDAVTYNMIINGFSE--QGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626

Query: 667 LTSQASYLLDLMLGKGWVPD 686
            + QA  L D M+ +G+ PD
Sbjct: 627 NSKQAFQLHDEMIHRGFAPD 646



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 221/491 (45%), Gaps = 17/491 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNV--REALISLVFSFVNHYRVNGAMRVLV 155
           +YCK +   G    + EME  C       +P+V     LI   F   +   V+ A+ ++ 
Sbjct: 166 SYCKTLEFDGADTVISEMEKRCV------FPDVVTHNVLIDARFRAGD---VDAAIALVD 216

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           +M + G K  +  +N VL  + + +R F     V++ M +  + P+V + N L+      
Sbjct: 217 SMANRGLKPGIVTYNSVLKGLCKHRR-FDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRV 275

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             ++ A+  ++ M  +   P+  +F  +I        +D + + L EM  LG+  +   Y
Sbjct: 276 GEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIY 335

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T +I   CR   + EA+R+   M     +PD +TY  L+N LC+  RL DA  +L +M  
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEE 395

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            G+TP    F  ++ G C  G F+ ++   +        P    +N+L++  C  G    
Sbjct: 396 RGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  + + M  R+I  +  +++I I   CE  ++  A+  L  MV    +P+  TY++ + 
Sbjct: 456 ANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIK 515

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C+  N +   +  +++   ++  D I+++ L+ G  + E +  A  VF  M K     
Sbjct: 516 GYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRP 575

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
            + ++N++I G      +  A R+      SG      TY  ++ G V    +K    + 
Sbjct: 576 DAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLH 635

Query: 571 AQMLVEGCALD 581
            +M+  G A D
Sbjct: 636 DEMIHRGFAPD 646



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/505 (22%), Positives = 213/505 (42%), Gaps = 50/505 (9%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P  + F+++I+    + +  ++      + D  + +  S    ++ +L R      A   
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRG 351
           ++++ + D   +  T   +++  C+ L  D A+ ++ +M    + P   T +V +D    
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLID---A 201

Query: 352 LCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
               G  D ++  ++       K G VT  +N++L+  C   +F  AK +   M    +A
Sbjct: 202 RFRAGDVDAAIALVDSMANRGLKPGIVT--YNSVLKGLCKHRRFDKAKEVFRTMDQCSVA 259

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S+NI I   C   E+++A +    M    V PD  ++S  +    +    + A   
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
            R++    LV D + Y+ ++ G C+   ++EA+ V   M   GC     ++N L+ GLC 
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK-------LQRAKDLL-------VVL 570
             ++  A +L +     G +    T+T ++ G  +       LQ    LL       VV 
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439

Query: 571 AQMLVEGCAL------------DVEA---------YCILIQSMSEQNKLKDCALFFNVMV 609
              L++G               D+ A         Y ILI S  E+ +++D   F + MV
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G +P+  T  S++ G      +      + K+  D+   D   +N LI+G  KE    
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMH 559

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
            A  + ++M  +   PDA T+ +++
Sbjct: 560 GAFNVFNIMEKEMVRPDAVTYNMII 584



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 10/272 (3%)

Query: 43  KSHQTTDYEAKIQSLR-HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTA 96
           K H+  D E  +  +    ++PD      LI       +  +AL++F  + +++R +   
Sbjct: 379 KQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL-LRQRLRPDV 437

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
            TY  +I  +   G++ +   L  +M  +E  PN     I L+ S     +V  A   L 
Sbjct: 438 VTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSI-LIDSHCEKGQVEDAFGFLD 496

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M   G   ++  +N ++              F+ K M +  + P++ T N L+    + 
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQK-MRQDNVFPDLITFNTLIHGYIKE 555

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             +  A + F  M K+   P++ T+ ++I G      + D+  +   M D GI+ +   Y
Sbjct: 556 ENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTY 615

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
             +I         ++A +L   M      PD+
Sbjct: 616 MSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/621 (23%), Positives = 269/621 (43%), Gaps = 28/621 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L   G ++E E L    +   +        +L+  +    R++ A+RV  NM
Sbjct: 356 TYNSLIYGL-CGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            S   KL +  + V++  ++++ R   +      EM   G+ PNV T   +++   +   
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCR-LKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGM 473

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +AL+ F+ M  +GC PN+ T+  +I GLI + ++  +++++ +M + GI   +  YT 
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTT 533

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C++++ + A RLF+MM    L PDE  Y  L + LC++ R ++A   L   +  G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKG 590

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAK 393
           +  T   +  +V G  + G  D +   +E    + C      ++ LL+  C   K   A 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 394 CILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            IL++M    +  C+  ++ I I  + +  +   A  L   M+ S   P   TY+ F+  
Sbjct: 651 SILDQMTVSGV-KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK+   E+A  +  ++    +  D ++Y+  + G   +  I  A      M    C  +
Sbjct: 710 YCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPN 769

Query: 512 SSSFNILIYGLCVMR----------------KVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
             ++ +L+     M                 +++   +L       G + T  TY+ I+ 
Sbjct: 770 CWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIA 829

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K  R ++  V+L  ML +  + + E Y +LI+   +         F   M++ G  P
Sbjct: 830 GFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP 889

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
             E+   L+ GL D        S    L+      +   + IL +GL K G     S LL
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             M  +    D+ ++ +L  S
Sbjct: 950 AAMDNRHCRIDSESYSMLTDS 970



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 163/704 (23%), Positives = 299/704 (42%), Gaps = 38/704 (5%)

Query: 25  SSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDH---LIRVLDNTNDLSSALK 81
           ++++  +T  + +E   + S +  +  +  + L  +++  H   L R   +  D ++AL 
Sbjct: 12  AAVASTSTPDIVAELGRVLSTRRWNKGSAYKRLSPSVTAAHVADLFRAPVSPLDPATALA 71

Query: 82  IFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK--ERYPNVREALISL-V 138
            F+ V+ +  F+HTA ++  ++  L         + L  +M+       +VREA+ ++  
Sbjct: 72  FFECVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQA 131

Query: 139 FSFVNHYRV-------NGAMRVLVNMN-------------SGGFKLSVDVFNVVLGAIVE 178
              V   R+       N A+R L+  +               G       +N ++ A   
Sbjct: 132 IRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYC- 190

Query: 179 EKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            K+G       Y  +++ +G+  +  T N LL     T+ +  A      M   GC  N 
Sbjct: 191 -KKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNE 249

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            ++ I+I+GL     V +++ ++  M   G  L L  YT +I  LC+E ++ +A  L   
Sbjct: 250 YSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDE 309

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    ++P   TY  +I+  C++ R+ DA  I   M   G  P D  +  ++ GLC  GK
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GK 368

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
            DE+   L        +P       L+   C A +   A  +   M       D  ++ +
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  L +   +++A E L  M  + + P+  TY++ + G CK+     AL VF+ +  + 
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
              ++ +Y  L+ GL Q +K+ +A+ +   M ++G +    ++  LI G C   + D A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           RL  +   +G +     Y  +   L K  RA++    L +   +G  L    Y  L+   
Sbjct: 549 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGF 605

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
           S+       A+    MV  G   D  T   LL  L    +L+   S ++++       + 
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             Y I+I+ + KEG    A  L + M+  G  P ATT+ + + S
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/525 (21%), Positives = 222/525 (42%), Gaps = 40/525 (7%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK    +G+ G   E+  L ++  +  +PN      SL++  +   +++ AM ++  
Sbjct: 466 DGYCK----VGMVGAALEVFKLMEH--EGCHPNAW-TYGSLIYGLIQDKKLHKAMALITK 518

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G    V  +  ++    + K  F +   +++ M + G+ P+    N L + L ++ 
Sbjct: 519 MQEDGITPGVITYTTLIQGQCK-KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R E A   +  + +KG      T+  ++ G       D +  ++ +M + G + +L  Y+
Sbjct: 578 RAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC++ KL EA+ +   M    +  + + Y  +I+ + +  + D A  +  +MI  
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P+   +   +   C++G+ +E+ + + +      +P    +N  +  C + G    A
Sbjct: 695 GHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRA 754

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENE---------------------EIRKAYELLG 431
              L++M D   A C+  N    WL                         E+   ++LL 
Sbjct: 755 FSTLKRMVD---ASCEP-NCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLE 810

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           RM+   + P   TYS+ + G CK    E+A  +   +  + +  +   Y+ L++  C ++
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 870

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
              +AV     M + G      S++ LI GLC     D+A  L         ++    + 
Sbjct: 871 LFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWK 930

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
            +  GL+K         +LA M    C +D E+Y +L  S+ E +
Sbjct: 931 ILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIREAS 975



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 104/244 (42%)

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           DA++  R+V  + LVL    Y+  +  L + +      +++  + + G    + ++N +I
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
              C    +  A R   L   SG    T T   ++LG  +    +    +L  M + GC 
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +  +Y ILIQ + E   +++  +   +MV  G   +  T   L+ GL    ++H     
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGL 306

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           ++++     V     YN +I+G  K G    A  +  LM   G  PD  T+  L+    G
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366

Query: 700 EEID 703
            ++D
Sbjct: 367 GKLD 370


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 254/600 (42%), Gaps = 77/600 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++  +V   R   A+ VL +M     +  V  +N+++  +   KR    F+ + K M K
Sbjct: 265 TILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLL-KRMRK 323

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + P+  T N L+   F   +I  A   F  M ++   P+  T+  +I G   N R+D 
Sbjct: 324 DDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDK 383

Query: 256 SVSILGEMF--------------------------------DL---GIQLELSFYTCIIP 280
           ++SIL EM                                 DL   GI +  +  T +I 
Sbjct: 384 ALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILID 443

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C+  ++ +A ++ K M    + PD +TY  LIN +C   ++ +  +IL  M   G+ P
Sbjct: 444 GFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILP 503

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFLAKCIL 396
            D ++  ++   C+ G   E++    D  + G V +P  HNALL      G    A+   
Sbjct: 504 NDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFR 563

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           + M+   I+ D  S+N  I   C    I  A+ +   MV     P+             +
Sbjct: 564 QYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPN-------------V 610

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           C Y++ LR                      GLCQ   + +A +   C+     ++   +F
Sbjct: 611 CTYQNLLR----------------------GLCQGGHLVQARQFMSCLLDIPFAIDEKTF 648

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N L+ G+C    +D+A+ L      +       TYT ++ G  +  +    LV+L  ML 
Sbjct: 649 NALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLE 708

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCA-LFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           +G   D  AY  L+  +  + ++K  + +F  ++ K GL  D     SL++G      ++
Sbjct: 709 KGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVN 768

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +   ++ +  +    +S+ YNIL++G  K G  S++ YL   M+ KG  PD  T+ LL+
Sbjct: 769 TIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLI 828



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 137/580 (23%), Positives = 252/580 (43%), Gaps = 10/580 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV ++V   +V  A   ++ M+  GFK S    N +L A+VEE      ++F+ +E +  
Sbjct: 162 LVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFL-RESLAR 220

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVDD 255
                V T N LL  L        A D  ++M  K C   NS T+  ++   +   R   
Sbjct: 221 KFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM--KSCHISNSVTYNTILHWYVKKGRFKA 278

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L +M    +Q ++  Y  +I  LCR  +   A  L K MR  DL PDE TY  LIN
Sbjct: 279 ALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLIN 338

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CGYVT 373
                 +++ A  +   M+   L P+   +  ++ G C   + D++++ L +    G + 
Sbjct: 339 GFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMP 398

Query: 374 S--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW-NIPIRWLCENEEIRKAYELL 430
           S   ++ALL   C       A  ++E +  R I    +   I I   C+  EI KA ++L
Sbjct: 399 SELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQIL 458

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    + PD  TYSA + G C++    +   +  ++    ++ + + Y+ L+   C+ 
Sbjct: 459 KSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKA 518

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             + EA++ F  + + G   +    N L++       + +A   R        S+ + ++
Sbjct: 519 GYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSF 578

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
            +I+              V   M+  G + +V  Y  L++ + +   L     F + ++ 
Sbjct: 579 NRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLD 638

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
                D +T  +LL G+     L        K++ ++ + D   Y IL++G  ++G    
Sbjct: 639 IPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILP 698

Query: 671 ASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAF 709
           A  +L +ML KG VPD   +  L+   + E ++ +  + F
Sbjct: 699 ALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVF 738



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 217/503 (43%), Gaps = 6/503 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           + K M + GI P+V T + L+  +    ++    +   RM K G  PN   +  +I    
Sbjct: 457 ILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYC 516

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               V +++    +++  G+      +  ++    RE  + EA    + M  +++  D +
Sbjct: 517 KAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSV 576

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---- 364
           ++  +I+  C    +  A  + +DM+  G +P    + +++RGLC+ G   ++  F    
Sbjct: 577 SFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCL 636

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEI 423
           L+          NALL   C  G    A  + EKM     + D  ++ I +   C   +I
Sbjct: 637 LDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKI 696

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSK 482
             A  +L  M+   VVPD   Y+  + G       + A  VF ++   + L  D I+Y+ 
Sbjct: 697 LPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNS 756

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ G  +   +     +   M +N    +S+S+NIL++G     +  K++ L       G
Sbjct: 757 LMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 816

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY  ++LGL +       +  L +M++EG   D   + ILI + SE++K+ +  
Sbjct: 817 IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             FN M    + P  +T  ++++GL     L      +++++      + + Y  L+N  
Sbjct: 877 QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936

Query: 663 WKEGLTSQASYLLDLMLGKGWVP 685
            + G   +A  L + M   G VP
Sbjct: 937 CRVGEIDRAFRLKEEMKAIGIVP 959



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/561 (21%), Positives = 240/561 (42%), Gaps = 17/561 (3%)

Query: 147  VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
            V  A++  V++   G   +  + N +L A   E     +     + M +  I  +  + N
Sbjct: 521  VKEALKHFVDIYRRGLVANPVIHNALLHAFYREGM-ITEAEHFRQYMSRMNISFDSVSFN 579

Query: 207  YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
             +++       I  A   +  M + G  PN  T++ +++GL     +  +   +  + D+
Sbjct: 580  RIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDI 639

Query: 267  GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
               ++   +  ++  +CR   L+EA+ L + M   + +PD  TY  L++  C   ++  A
Sbjct: 640  PFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPA 699

Query: 327  NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE-SVNFLEDKC--GYVTS--PHNALLE 381
              IL+ M+  G+ P    +  ++ GL   G+    S  F E  C  G       +N+L+ 
Sbjct: 700  LVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMN 759

Query: 382  CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                +      K ++  M   ++  +  S+NI +    +  +  K+  L   MV   + P
Sbjct: 760  GYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP 819

Query: 441  DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
            D  TY   +LG  +    + A++   ++  + +  D + +  L+    +  K+  A++VF
Sbjct: 820  DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVF 879

Query: 501  CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             CM     S SS +F+ +I GL     +D + ++       G     + Y  ++    ++
Sbjct: 880  NCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRV 939

Query: 561  QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
                    +  +M   G      A   +I+ +    KL++  + F+ M+++G+VP   T 
Sbjct: 940  GEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATF 999

Query: 621  LSLLHGLADGSQ----LHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLL 675
             +L+H L   S+    LHL      +L+    + +D   YN+LI GL K+   S A  L 
Sbjct: 1000 TTLMHSLCKESKIADALHL-----KRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLY 1054

Query: 676  DLMLGKGWVPDATTHGLLVGS 696
              M  KG  P+ TT+  L G+
Sbjct: 1055 GEMKSKGLWPNITTYITLTGA 1075



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 122/557 (21%), Positives = 233/557 (41%), Gaps = 62/557 (11%)

Query: 110  GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
            G + E E   Q M +        +   ++ S+ +   + GA  V  +M   G+  +V  +
Sbjct: 554  GMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTY 613

Query: 170  NVVL------GAIVEEKRGFA---DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
              +L      G +V+ ++  +   D  F   E           T N LL  +     ++ 
Sbjct: 614  QNLLRGLCQGGHLVQARQFMSCLLDIPFAIDE----------KTFNALLLGICRYGTLDE 663

Query: 221  ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
            ALD   +M K  C P+  T+ I++ G     ++  ++ IL  M + G+  +   YTC++ 
Sbjct: 664  ALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLN 723

Query: 281  MLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             L  E +++ A  +F +++    L  D + Y  L+N   ++  ++    ++ DM    + 
Sbjct: 724  GLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVY 783

Query: 340  PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN--------ALLEC-CCNAGKFF 390
            P    +  ++ G  + G+F +S+   +        P N         L EC   +    F
Sbjct: 784  PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 843

Query: 391  LAKCILEKM-ADRKIADC---------------DSWNIPIRWLCE-----------NEEI 423
            L K +LE +  DR + D                  +N  ++WL             N  I
Sbjct: 844  LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNC-MKWLHMSPSSKTFSAMINGLI 902

Query: 424  RKAY-----ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            RK Y     ++L  M+   + P+   Y A V  KC++   + A R+  ++ A  +V   +
Sbjct: 903  RKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEV 962

Query: 479  SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            + S ++ GLC+  K+ EAV VF  M ++G   + ++F  L++ LC   K+  A+ L+ L 
Sbjct: 963  AESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLM 1022

Query: 539  YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
                      +Y  ++ GL K +   D L +  +M  +G   ++  Y  L  +M    ++
Sbjct: 1023 ELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRV 1082

Query: 599  KDCALFFNVMVKAGLVP 615
            ++       + + GL+P
Sbjct: 1083 QNGEELLEDIEERGLIP 1099


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 156/690 (22%), Positives = 288/690 (41%), Gaps = 76/690 (11%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
            P+ ++ V+    D+  AL  F+WV  + +  H+ + Y  +++ +    N+E +E + + 
Sbjct: 98  QPELVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEE 157

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M    +       I +V SFV   ++  A  V+  M    F+ +   +  ++GA      
Sbjct: 158 MSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGA------ 211

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
                                         L   +  +  L   R+M + G       F 
Sbjct: 212 ------------------------------LSAAHEADPMLTLLRQMQEIGYEVTVHLFT 241

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I       RVD ++S+L EM       +L  Y   I    +  K++ A + F  +++ 
Sbjct: 242 TLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQ 301

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            L+PD++T+  +I  LC+  R+D+A ++ E++      P    +  ++ G   VGKF+E+
Sbjct: 302 GLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEA 361

Query: 362 VNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
            + LE   + G + S   +N +L C    GK   A  ILE M      +  S+NI I  L
Sbjct: 362 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDML 421

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+  E+  A ++   M  + + P+  T +  +   CK    ++A  +F  +  +    DS
Sbjct: 422 CKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDS 481

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI------------------ 519
           +++  L++GL +  K+ +A  ++  M  +G + ++  +  LI                  
Sbjct: 482 VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKE 541

Query: 520 ---------------YGLCVMR--KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
                          Y  CV +  +++K   L     + G +    +Y+ ++ GLVK   
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGF 601

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
           +KD   +  +M  +G  LD  AY I+I    +  K+         M   GL P   T  S
Sbjct: 602 SKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGS 661

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           ++ GLA   +L        +  S +  L+  +Y+ LI+G  K G   +A  +L+ ++ KG
Sbjct: 662 VIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG 721

Query: 683 WVPDATTHGLLVGSSV-GEEIDSRRFAFDS 711
             P+  T   L+ + V  EEID     F +
Sbjct: 722 LTPNTYTWNCLLDALVKAEEIDEALVCFQN 751



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 142/645 (22%), Positives = 271/645 (42%), Gaps = 44/645 (6%)

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           +F+     Y  +I  L  A   + M  L + M +  Y        +L+  F    RV+ A
Sbjct: 197 KFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAA 256

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + +L  M S  F   + ++NV +      K G  D  +  + E+   G+VP+  T   ++
Sbjct: 257 LSLLDEMKSNSFNADLVLYNVCIDCF--GKVGKVDMAWKFFHELKSQGLVPDDVTFTSMI 314

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
            VL +  R++ A++ F  +      P    +  +I G  +  + +++ S+L      G  
Sbjct: 315 GVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCI 374

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y CI+  L R+ K+EEA+R+ + M+ +D  P+  +Y  LI+ LC+   L+ A  +
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKV 433

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCN 385
            + M   GL P       ++  LC+  + DE+ +        V +P +    +L++    
Sbjct: 434 QDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGR 493

Query: 386 AGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            GK   A  + EKM D  +  +   +   IR   +       +++   M+     PD   
Sbjct: 494 HGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLML 553

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
            + ++    K    E    +F ++ AQ L  D  SYS L+ GL +     +  ++F  M 
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK 613

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           + G  L + ++NI+I G C   KV+KA +L     + G   T  TY  ++ GL K+ R  
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLD 673

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           +  ++  +   +   L+V  Y  LI    +  ++ +  L    +++ GL P+  T   LL
Sbjct: 674 EAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLL 733

Query: 625 HGLADGSQL----------------------HLVSSGINKLVSDSEVL------------ 650
             L    ++                       ++ +G+ K+   ++              
Sbjct: 734 DALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLK 793

Query: 651 -DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++  Y  +I+GL + G   +A  L +     G +PD+  +  ++
Sbjct: 794 PNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/460 (21%), Positives = 200/460 (43%), Gaps = 40/460 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V   M +AG+ PN+ T+N +++ L +  R++ A   F  +  K C P+S TF  +I GL 
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + +V+D+  +  +M D G       YT +I    +  + E+  +++K M      PD +
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
                ++C+ +   ++    + E++   GLTP    +  ++ GL + G   ++       
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 366 -EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-----------------KIADC 407
            E      T  +N +++  C +GK   A  +LE+M  +                 KI   
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672

Query: 408 DS-------------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           D                    ++  I    +   I +AY +L  ++   + P+  T++  
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +    K    ++AL  F+ +       + ++YS +V GLC+V K  +A   +  M K G 
Sbjct: 733 LDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGL 792

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             ++ ++  +I GL  +  V +A  L     SSG    ++ Y  ++ GL    +A D  +
Sbjct: 793 KPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYI 852

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +  +  ++GC +  +   +L+ ++ + + L+  A+   V+
Sbjct: 853 LFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVL 892



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 170/404 (42%), Gaps = 41/404 (10%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+     H +VN A  +   M   G   +  V+  ++    +  R   D   +YKEM+ 
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRK-EDGHKIYKEMMH 544

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P++  LN  ++ +F+   IE     F  +  +G  P+ R++ I+I GL+      D
Sbjct: 545 RGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKD 604

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +  EM + G+ L+   Y  +I   C+  K+ +A +L + M+   L P  +TY  +I+
Sbjct: 605 TYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVID 664

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L +  RLD+A  + E+     +     V+  ++ G  +VG+ DE+   LE+      +P
Sbjct: 665 GLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 724

Query: 376 H----NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY--- 427
           +    N LL+    A +   A    + M + K    + +++I +  LC+  +  KA+   
Sbjct: 725 NTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFW 784

Query: 428 --------------------------------ELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                                           +L  R   S  +PD A Y+A + G    
Sbjct: 785 QEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
               DA  +F +   +   + S +   L++ L + + + +A  V
Sbjct: 845 NKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIV 888



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/203 (19%), Positives = 89/203 (43%), Gaps = 1/203 (0%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  +I   G  G ++E   + + ++++           L+ + V    ++ A+    NM 
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMK 753

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           +     +   +++++  + + ++    FVF ++EM K G+ PN  T   ++  L     +
Sbjct: 754 NLKCPPNEVTYSIMVNGLCKVRKFNKAFVF-WQEMQKQGLKPNTITYTTMISGLARVGNV 812

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
             A D F R    G  P+S  +  +I+GL   ++  D+  +  E    G ++       +
Sbjct: 813 LEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVL 872

Query: 279 IPMLCRENKLEEAIRLFKMMRAL 301
           +  L + + LE+A  +  ++R +
Sbjct: 873 LDALHKADCLEQAAIVGAVLREM 895


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 248/563 (44%), Gaps = 74/563 (13%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++GA  ++  M + G + +V ++  ++   +++ R F D V V KEM + GI P+    N
Sbjct: 436 LDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSR-FGDAVRVLKEMREQGIAPDTFCYN 494

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L +  +++ A      M + G  P++ T+   I G I       +   + EM + 
Sbjct: 495 SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC 554

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+       T +I   C++ K+ EA   F+ M    ++ D  TY  L+N L +N +++DA
Sbjct: 555 GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDA 614

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
            +I  +M   G+ P  DVF                              +  L++     
Sbjct: 615 EEIFHEMRGKGIAP--DVF-----------------------------SYGTLIDGFSKL 643

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G    A  I ++M    + ++   +N+ +   C + EI KA ELL  M      P+  TY
Sbjct: 644 GNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTY 703

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
              + G CK  +  +A ++F ++  + LV DS  Y+ LV+G C++  +  A+ +F    K
Sbjct: 704 CTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK 763

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG-LVKLQRAK 564
            GC+ SS+ FN LI  +    K               T  TT    ++M G   K  +  
Sbjct: 764 -GCASSSAPFNALINWVFKFGK---------------TELTTDMINRLMDGSFDKFGKPN 807

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D+                  Y I+I  + ++  L+     F+ M KA L+P   T  SLL
Sbjct: 808 DV-----------------TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           +G     +   + S  +++++     D+ MY+++IN   KEG+T++A  LLD M  K  V
Sbjct: 851 NGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910

Query: 685 PD------ATTHGLLVG-SSVGE 700
            D      +T   LL G + VGE
Sbjct: 911 DDGCKLSISTCRALLSGFAKVGE 933



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 139/666 (20%), Positives = 287/666 (43%), Gaps = 48/666 (7%)

Query: 56  SLRHNLSPDHLIRVL--DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           +L   ++P+ ++ VL     +D S  L  F  V  QK  +   D++  + L L   G++E
Sbjct: 55  NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGSIE 114

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
           +   +   M++ ++P V E   S+V   +  +      RVL+             F +++
Sbjct: 115 KAHSVVIRMIERKWP-VAEVWSSIV-RCLREFVGKSDDRVLL-------------FGILI 159

Query: 174 GAIVEEKRGFAD---FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
              +E  +GF D   FVF   + +   +VP++   N+LL+ L + NR++   D ++ M +
Sbjct: 160 DGYIE--KGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVE 217

Query: 231 KGCCPNSRTFEIVIKGL---------------------IANSRVDDSVSILGEMFDLGIQ 269
           +    + +++E++I                         A   VD+++ +   M   G+ 
Sbjct: 218 RNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLV 277

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
                Y  +I  LC++ +LE+A  L   M ++ L  D + Y  LI+ L +    D AN +
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGL 337

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           + +M+  G +    ++   +  + + G  +++    +    +  +P    + +L+E    
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397

Query: 386 AGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                    +L ++  R I     ++   ++ +C + ++  AY ++  M  S   P+   
Sbjct: 398 EKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVI 457

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  +    +   + DA+RV +++  Q +  D+  Y+ L+ GL + +K+ EA      M 
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           +NG    + ++   I G     +   A +        G        T ++    K  +  
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           +       M+ +G   D + Y +L+  + +  K+ D    F+ M   G+ PD  +  +L+
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
            G +    +   SS  +++V      +  +YN+L+ G  + G   +A  LLD M GKG+ 
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697

Query: 685 PDATTH 690
           P+A T+
Sbjct: 698 PNAVTY 703



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/509 (22%), Positives = 213/509 (41%), Gaps = 40/509 (7%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           K M   G+VP+  + N L++ L +  R+E A      M+  G   ++  + I+I GL+  
Sbjct: 269 KSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKG 328

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              D +  ++ EM   G  ++   Y   I ++ +E  +E+A  LF  M    + P    Y
Sbjct: 329 RNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAY 388

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI        +    ++L ++    +  +   +   V+G+C  G  D + N +++   
Sbjct: 389 ASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGA 448

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P    +  L++      +F  A  +L++M ++ IA D   +N  I  L + +++ +
Sbjct: 449 SGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDE 508

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A   L  MV +   PD  TY AF+ G  +   +  A +  +++    ++ + +  + L+ 
Sbjct: 509 ARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLIN 568

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  K+ EA   F  M + G    + ++ +L                           
Sbjct: 569 EYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL--------------------------- 601

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
                   M GLVK  +  D   +  +M  +G A DV +Y  LI   S+   ++  +  F
Sbjct: 602 --------MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIF 653

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + MV+AGL  +      LL G     ++      ++++       ++  Y  +I+G  K 
Sbjct: 654 DEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G  ++A  L D M  KG VPD+  +  LV
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLV 742



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 199/461 (43%), Gaps = 56/461 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+       +++ A   L+ M   GFK     +   +   +E    FA      KEM++
Sbjct: 495 SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE-FASADKYVKEMLE 553

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G++PN      L+    +  ++  A   FR M ++G   +++T+ +++ GL+ N +V+D
Sbjct: 554 CGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVND 613

Query: 256 SVSILGEM-------------------------------FDLGIQLELS----FYTCIIP 280
           +  I  EM                               FD  +Q  L+     Y  ++ 
Sbjct: 614 AEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLG 673

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             CR  ++E+A  L   M      P+ +TY  +I+  C++  L +A  + ++M + GL P
Sbjct: 674 GFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVP 733

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDK---CGYVTSPHNALLECCCNAGKFFLAKCILE 397
              V+  +V G C +   + ++   E     C   ++P NAL+      GK  L   ++ 
Sbjct: 734 DSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMIN 793

Query: 398 KMADRKIADCD-----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
           ++ D            ++NI I +LC+   +  A EL   M  ++++P   TY++ + G 
Sbjct: 794 RLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGY 853

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM-SKN----G 507
            K+    +   VF +V A  +  D+I YS ++    +    T+A+ +   M +KN    G
Sbjct: 854 DKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDG 913

Query: 508 CSLSSSSFNILIYGLCVM-------RKVDKAIRLRSLAYSS 541
           C LS S+   L+ G   +       + V+  +RL+ +  SS
Sbjct: 914 CKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSS 954



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 9/199 (4%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV-FNVVLGAIVEEKRGFADFVFVYK 191
           ALI+ VF F         +  L++ +   F    DV +N+++  + +E         ++ 
Sbjct: 774 ALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGN-LEAAKELFH 832

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            M KA ++P V T   LL    +  R       F  +   G  P++  + ++I   +   
Sbjct: 833 HMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEG 892

Query: 252 RVDDSVSILGEMF-----DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
               ++ +L +MF     D G +L +S    ++    +  ++E A ++ + M  L  +PD
Sbjct: 893 MTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPD 952

Query: 307 ELTYEELIN--CLCENLRL 323
             T  ELIN  C+  N R+
Sbjct: 953 SSTVIELINESCISSNQRM 971


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 223/465 (47%), Gaps = 6/465 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           SV  FN ++G++V+ K      + + K+MV  G+ P++ TL+  +        +  A   
Sbjct: 83  SVIQFNTIIGSVVKMKHCPVA-ISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              + K+G  PN+ T   V+KGL  N  V  ++     +   G+ L+   Y  +I  LC+
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +  +A +L + M    + P+ + Y  +I+  C++     A D+   ++ +G+ P    
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMA 400
           +  ++RG C  G++ E    + +      +P+    N L++  C  GK   A+ +   M 
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 401 DR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            R +  D  ++N  I   C +  + +A +L   +    ++PD  +Y+  ++G CK    +
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+ +F ++  +++VLD + YS L++GLC+  +I+ A E+F  ++ +G   +  ++NILI
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 441

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
              C ++ +D  I L  L    G + T  TY  ++ G  K +R ++ + +L+ M  +  A
Sbjct: 442 DAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA 501

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
            D   Y  L   + +  ++ D    F VM   G   D  T   LL
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/487 (20%), Positives = 209/487 (42%), Gaps = 36/487 (7%)

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           ++L   N I+ A+  F  +      P+   F  +I  ++       ++S+L +M   G+ 
Sbjct: 57  KILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVT 116

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +   +  I   C   ++  A  +  ++      P+ +T   ++  LC N  +  A D 
Sbjct: 117 PSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDF 176

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
            +++   G+   +  +  ++ GLC++G+  ++   L++  G V  P+  +          
Sbjct: 177 HDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVI---------- 226

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
                               +N+ I   C++E   KA +L  ++V   + PD  TY++ +
Sbjct: 227 --------------------YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 266

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G C+   + +  ++  ++  +++  +  +++ L++  C+  K+ EA  +F  M K G  
Sbjct: 267 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 326

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               +FN LI G C+   V +A +L    +  G      +YT +++G  K +R  + + +
Sbjct: 327 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSL 386

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             +M  +   LD+  Y  LI  + +  ++      F+ +   G  P+  T   L+     
Sbjct: 387 FNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFC- 445

Query: 630 GSQLHLVSSGIN--KLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
             ++  +  GI   KL+    +  + + YNILING  K     +A  LL +M  K   PD
Sbjct: 446 --KIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPD 503

Query: 687 ATTHGLL 693
           + T+  L
Sbjct: 504 SITYNSL 510



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 180/387 (46%), Gaps = 6/387 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V  AM    N+ + G  L    +  ++  + +  R    F  + +EM    + PN+   N
Sbjct: 170 VQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLL-QEMEGQVVKPNIVIYN 228

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            +++   +      A D + ++   G  P+  T+  +I+G     +  +   ++ EM + 
Sbjct: 229 MIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK 288

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            I   +  +  +I   CR+ K+ EA  +F +M      PD +T+  LI+  C +  + +A
Sbjct: 289 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 348

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTSP---HNALLEC 382
             + + +   G+ P    +  ++ G C+  + DE+V+ F E +C  +      +++L++ 
Sbjct: 349 RKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 408

Query: 383 CCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C +G+   A  +   +  D    +  ++NI I   C+ ++I    EL   M    + P 
Sbjct: 409 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 468

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TY+  + G CK     +A+ +   + +++L  DSI+Y+ L +GLC+  +I++A E+F 
Sbjct: 469 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFK 528

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKV 528
            M   G  +  +++N+L+   C  + V
Sbjct: 529 VMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/323 (20%), Positives = 133/323 (41%), Gaps = 7/323 (2%)

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           R  + C   N  I  L     I  A  L   ++    +P    ++  +    K+ +   A
Sbjct: 46  RFFSHCPKQNAKI--LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVA 103

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           + + +Q+  + +     + S  +   C + ++  A  V   + K G   ++ +   ++ G
Sbjct: 104 ISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKG 163

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           LC+  +V KA+       + G       Y  ++ GL K+ R+ D   +L +M  +    +
Sbjct: 164 LCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN 223

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  Y ++I S  +          +  +V  G+ PD  T  SL+ G     Q   V   + 
Sbjct: 224 IVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMC 283

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV--G 699
           ++V+ +   +   +N+LI+   ++G   +A  + +LM+ +G  PD  T   L+      G
Sbjct: 284 EMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHG 343

Query: 700 EEIDSRRF---AFDSSSFPDSVS 719
             +++R+     F+    PD  S
Sbjct: 344 NVLEARKLFDTVFERGILPDVWS 366


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/571 (22%), Positives = 247/571 (43%), Gaps = 24/571 (4%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V  AM V   M + G      V+  ++  +    R       +   M + G  PNV   N
Sbjct: 158 VREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAE-GFEPNVVVYN 216

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++       +E A+D F RM   GC PN RT+  +I G   + ++D ++ +   M D 
Sbjct: 217 ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDA 276

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+   +  YT +I   C + +L+ A RL + M    L+P+E T   LI+ LC++ R+ +A
Sbjct: 277 GLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEA 336

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPH--NALLEC 382
             +L  +I  G+   + V+  ++ GLC+ G+F  +   ++     G+V   H  ++L++ 
Sbjct: 337 QLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDG 396

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C   +   A  +L+ M ++ +     ++ I I  L        + ++L +M+ + + PD
Sbjct: 397 LCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TY+ FV   C     EDA  +   +    +  + ++Y+ L+ G   +   ++A   F 
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFK 516

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAI--------RLRSLAYSSG---------TS 544
            M  NGC  +  S+ +L+  L + ++    I        ++  + Y  G           
Sbjct: 517 HMVANGCKPNEESYTVLLR-LLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLP 575

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                Y   +  L ++ R  +  ++L +M         + Y  +I        L +   F
Sbjct: 576 SEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTF 635

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            + MVK+G +P  E+   ++  L +   +         ++S     +   + ILI+GL +
Sbjct: 636 VDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQ 695

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           +G  ++ S LL +M  K + P    +  L G
Sbjct: 696 KGYVAECSSLLSVMEEKNYRPSDALYARLTG 726



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 203/473 (42%), Gaps = 23/473 (4%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N RT+  +I        +  S   L  +   G   +   YT  +   CR   L  A RLF
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
            +M     +    TY  L++ LC    + +A  +   M   G  P   V+  +V GLC  
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSW 410
           G+  E+   L D       P    +NAL++  CN G   LA  + E+M  +    +  ++
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
              I   C++ ++ +A  L  RMV + +VP+  TY+A + G+C     + A R+ + +  
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
             LV +  + S L++ LC+ E++ EA  +   + + G  ++   +  LI GLC   +   
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A RL     S G      TY+ ++ GL + +   + ++VL  M+ +G       Y I+I 
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL--------ADGSQLHLVSSGI-N 641
            +  +          + M+ AG+ PD  T    +           A+   LH+V  G+  
Sbjct: 431 ELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            LV+         YN LI G    GLTSQA      M+  G  P+  ++ +L+
Sbjct: 491 NLVT---------YNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 181/430 (42%), Gaps = 34/430 (7%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G V    T   LL  L     +  A+  F  M   GC P+   +  ++ GL    R  ++
Sbjct: 137 GCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREA 196

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
            ++L +    G +  +  Y  +I   C    LE A+ +F+ M      P+  TY ELI+ 
Sbjct: 197 ETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISG 256

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
            C++ +LD A  +   M+  GL P    +  +++G C  G+ D         C Y     
Sbjct: 257 FCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLD---------CAYR---- 303

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMV 434
                             +L+ M +  +   + W  ++ I  LC++E + +A  LLG ++
Sbjct: 304 ------------------LLQSMENSGLVP-NEWTCSVLIDALCKHERVGEAQLLLGSLI 344

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  +   Y++ + G CK   +  A R+ + + +Q  V D+ +YS L++GLC+ ++++
Sbjct: 345 QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELS 404

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA+ V   M + G   S  ++ I+I  L      D + ++     ++G      TYT  +
Sbjct: 405 EAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFV 464

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
                  R +D   ++  M+  G   ++  Y  LI   +           F  MV  G  
Sbjct: 465 RSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCK 524

Query: 615 PDRETMLSLL 624
           P+ E+   LL
Sbjct: 525 PNEESYTVLL 534



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 157/359 (43%), Gaps = 54/359 (15%)

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVS---- 436
           C NA    LA+        R +AD +S+   +P R L     +  AY L G +  S    
Sbjct: 43  CLNAFLMALAR-------HRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHL 95

Query: 437 ------SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
                    PD   Y++FV+G C+      A R+F  +  +  V  + +Y+ L+ GLC  
Sbjct: 96  SSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGA 155

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             + EA+ VF  M  +GC+     +  +++GLC   +  +A  L S A + G       Y
Sbjct: 156 GMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ G   +   +  + V  +M V GC+ +V  Y  LI    +  KL    + F+ MV 
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275

Query: 611 AGLVPDRETMLSLLHGLADGSQL--------HLVSSGI----------------NKLVSD 646
           AGLVP+  T  +L+ G     QL         + +SG+                ++ V +
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335

Query: 647 SEVLDSSM-----------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++L  S+           Y  LI+GL K G  + A  L+  ++ +G+VPDA T+  L+
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 279/660 (42%), Gaps = 63/660 (9%)

Query: 62  SPDHL-IRVLDNTNDLSS------ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           SP+H  I+ LD    L        AL  FK ++    F+HT  T+  MI KL + G V+ 
Sbjct: 35  SPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDS 94

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           ++ L Q M  + +    +  IS++  +        A+ +   +   G   SV ++N VL 
Sbjct: 95  VQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLD 154

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
            ++ E R       VY++M + G  PNV T N LL+ L + N+++ A      M  KGCC
Sbjct: 155 TLLGENR-IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE--LSFYTCIIPMLCRENKLEEAI 292
           P++ ++  VI  +         V ++ E  +L  + E  +S Y  +I  LC+E+  + A 
Sbjct: 214 PDAVSYTTVISSMC-------EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAF 266

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            L + M    + P+ ++Y  LIN LC + +++ A   L  M+  G  P       +V+G 
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326

Query: 353 CEVGKFDESVNFLEDKC-GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
              G   ++++       G+   P                              +  ++N
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQP------------------------------NVVAYN 356

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             ++  C +  I KA  +   M      P+  TY + + G  K  + + A+ ++ ++   
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               + + Y+ +VE LC+  K  EA  +   MSK  C+ S  +FN  I GLC   ++D A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476

Query: 532 IRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
            ++ R +           TY +++ GL K  R ++   +  ++ + G       Y  L+ 
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536

Query: 591 SMSEQNKLKDCAL-FFNVMVKAGLVPDRETMLSLL-----HGLAD--GSQLHLVSSGINK 642
             S    L   AL     M+  G  PD  TM  ++      G A+     L LVS G  K
Sbjct: 537 G-SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
              D  V+    Y  +I GL +         LL+ M+  G VP   T  +L+   + ++I
Sbjct: 596 WRPD--VIS---YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDI 650


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 236/523 (45%), Gaps = 47/523 (8%)

Query: 181 RGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           RG  AD + V  EM   G        + +LE         SA+   + +H KGC  +S  
Sbjct: 121 RGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGN 180

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
             +V+  +     VD+ V +L ++   G + ++  Y  ++  LC   + ++   L   M 
Sbjct: 181 CNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV 240

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            +   P+  T+  LI  LC N   +  ++ L  M   G TP   ++  I+ G+C+ G  +
Sbjct: 241 RVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHE 300

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWN 411
            + + L     Y   P    +N +L+  C+A ++  A+ +L +M      DC     ++N
Sbjct: 301 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE---DCPLDDVTFN 357

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           I + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++A+ + + +SA 
Sbjct: 358 ILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC 417

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               ++ISY+ +++GLC+ E+  +A E+   M + GC  +  +FN LI  +C    V++A
Sbjct: 418 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQA 477

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           I L                                   L QMLV GC+ D+ +Y  +I  
Sbjct: 478 IEL-----------------------------------LKQMLVNGCSPDLISYSTVIDG 502

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           + +  K ++     NVM+  G+ P+     S+   L+   +   +    + +   +   D
Sbjct: 503 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 562

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++YN +I+ L K   T +A      M+  G +P+ +T+ +L+
Sbjct: 563 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 605



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 205/429 (47%), Gaps = 9/429 (2%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+  + +L  + S G +  +  +N VL  +   KR + D   +  EMV+ G  PNV T N
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKR-WDDVEELMVEMVRVGCPPNVATFN 252

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L      E   +   +M + GC P+ R +  +I G+  +   + +  IL  M   
Sbjct: 253 TLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSY 312

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  Y  ++  LC   + EEA  L   M   D   D++T+  L++  C+N  +D  
Sbjct: 313 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV 372

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLEC 382
            ++LE M+  G  P    +  ++ G C+ G  DE+V  L++     C   T  +  +L+ 
Sbjct: 373 IELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKG 432

Query: 383 CCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C A ++  A+ ++  M  +  + +  ++N  I ++C+   + +A ELL +M+V+   PD
Sbjct: 433 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPD 492

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             +YS  + G  K    E+AL +   +  + +  ++I YS +   L +  +  + +++F 
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK-- 559
            +        ++ +N +I  LC   + D+AI   +   S+G     STYT ++ GL    
Sbjct: 553 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 612

Query: 560 -LQRAKDLL 567
            ++ A+DLL
Sbjct: 613 LVREAQDLL 621



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/498 (22%), Positives = 218/498 (43%), Gaps = 6/498 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
            +V S      +  A+ VL  M   G   +  + +V+L A      GF   V   + +  
Sbjct: 113 PIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGG-GFRSAVRALQVLHA 171

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G   +    N ++  + E   ++  ++  R++   GC P+  ++  V+KGL    R DD
Sbjct: 172 KGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDD 231

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
              ++ EM  +G    ++ +  +I  LCR    E+       M      PD   Y  +I+
Sbjct: 232 VEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIID 291

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGY 371
            +C++   + ANDIL  M   GL P    +  +++GLC   +++E+ + L    ++ C  
Sbjct: 292 GICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPL 351

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
                N L++  C  G       +LE+M +   I D  ++   I   C+   + +A  LL
Sbjct: 352 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 411

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M      P+  +Y+  + G C+   + DA  +   +  Q  + + ++++ L+  +C+ 
Sbjct: 412 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 471

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             + +A+E+   M  NGCS    S++ +I GL    K ++A+ L ++  + G +  T  Y
Sbjct: 472 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIY 531

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + +   L +  R   ++ +   +       D   Y  +I S+ ++ +      FF  MV 
Sbjct: 532 SSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVS 591

Query: 611 AGLVPDRETMLSLLHGLA 628
            G +P+  T   L+ GLA
Sbjct: 592 NGCMPNESTYTILIRGLA 609



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 207/491 (42%), Gaps = 46/491 (9%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
            S     +I+ L A  R  D+   L    D      +  Y  +I   CR  ++  A    
Sbjct: 43  GSGRLSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQVAAAR--- 96

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV----------- 344
           ++  A+ + P+  TY  ++  LC    + DA  +L++M + G   T  +           
Sbjct: 97  RLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRG 156

Query: 345 --FVDIVRGL----------------------CEVGKFDESVNFLEDKCGYVTSP----H 376
             F   VR L                      CE G  DE V  L     +   P    +
Sbjct: 157 GGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSY 216

Query: 377 NALLECCCNAGKF-FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NA+L+  C A ++  + + ++E +      +  ++N  I +LC N    + +E L +M  
Sbjct: 217 NAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPE 276

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD   Y+  + G CK  ++E A  +  ++ +  L  + + Y+ +++GLC  E+  E
Sbjct: 277 HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEE 336

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A ++   M +  C L   +FNIL+   C    VD+ I L       G      TYT ++ 
Sbjct: 337 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 396

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K     + +++L  M   GC  +  +Y I+++ +    +  D     + M++ G +P
Sbjct: 397 GFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP 456

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  +L++ +     +      + +++ +    D   Y+ +I+GL K G T +A  LL
Sbjct: 457 NPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 516

Query: 676 DLMLGKGWVPD 686
           ++M+ KG  P+
Sbjct: 517 NVMINKGITPN 527



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 13/264 (4%)

Query: 118 LCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
            CQN + +R   + E ++            +++  F     V+ A+ +L NM++ G K +
Sbjct: 363 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              + +VL  +   +R + D   +   M++ G +PN  T N L+  + +   +E A++  
Sbjct: 423 TISYTIVLKGLCRAER-WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELL 481

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M   GC P+  ++  VI GL    + ++++ +L  M + GI      Y+ +   L RE
Sbjct: 482 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 541

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            + ++ I++F  ++   +  D   Y  +I+ LC+    D A D    M+  G  P +  +
Sbjct: 542 GRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 601

Query: 346 VDIVRGLCEVGKFDESVNFLEDKC 369
             ++RGL   G   E+ + L + C
Sbjct: 602 TILIRGLASEGLVREAQDLLSELC 625



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/353 (21%), Positives = 132/353 (37%), Gaps = 40/353 (11%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           +AL+   C AG+   A   L+   D   A   ++N  I   C   ++  A  L   + V 
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGD--AAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP 105

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              P+  TY   V   C      DAL V  ++  +           ++E  C+      A
Sbjct: 106 ---PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           V     +   GC+L S + N+++  +C    VD+ + L     S G      +Y  ++ G
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI----------------QSMSEQNKLKD 600
           L   +R  D+  ++ +M+  GC  +V  +  LI                  M E     D
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282

Query: 601 CALFFNV-------------------MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
             ++  +                   M   GL P+     ++L GL    +       + 
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 342

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++  +   LD   +NIL++   + GL  +   LL+ ML  G +PD  T+  ++
Sbjct: 343 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 395


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 215/441 (48%), Gaps = 5/441 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + ++ +MVK+   P++   N LL  + +  + +  +   ++M   G   +  TF IVI
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +V  ++SILG+M  LG + +      ++   CR N++ +A+ L   M  +   
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD + Y  +I+ LC+  R++DA D  +++   G+ P    +  +V GLC   ++ ++   
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L D      +P    ++ALL+     GK   AK + E+M    I  D  +++  I  LC 
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           ++ I +A ++   MV    + D  +Y+  + G CK    ED +++FR++S + LV ++++
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G  Q   + +A E F  M   G S    ++NIL+ GLC   +++KA+ +     
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TYT ++ G+ K  + ++   +   + ++G   D+  Y  ++  +  +  L 
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487

Query: 600 DCALFFNVMVKAGLVPDRETM 620
           +    +  M + GL+ +  T+
Sbjct: 488 EVEALYTKMKQEGLMKNDCTL 508



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 181/383 (47%), Gaps = 39/383 (10%)

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMVKAGIVPN 201
           ++V+ A+ +L  M     KL  +   V +G++V     +   +D V +  +MV+ G  P+
Sbjct: 134 FQVSLALSILGKM----LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           +   N +++ L +T R+  A D F+ + +KG  PN  T+  ++ GL  +SR  D+  +L 
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +M    I   +  Y+ ++    +  K+ EA  LF+ M  + + PD +TY  LIN LC + 
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           R+D+AN + + M+  G         D+V                          +N L+ 
Sbjct: 310 RIDEANQMFDLMVSKG------CLADVV-------------------------SYNTLIN 338

Query: 382 CCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C A +      +  +M+ R  +++  ++N  I+   +  ++ KA E   +M    + P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  TY+  + G C     E AL +F  +  + + LD ++Y+ ++ G+C+  K+ EA  +F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 501 CCMSKNGCSLSSSSFNILIYGLC 523
           C +S  G      ++  ++ GLC
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 180/401 (44%), Gaps = 36/401 (8%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M+K  Y   R  + SLV  F    RV+ A+ ++  M   G+K  +  +N ++ ++ + KR
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
               F F +KE+ + GI PNV T   L+  L  ++R   A      M KK   PN  T+ 
Sbjct: 206 VNDAFDF-FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            ++   + N +V ++  +  EM  + I  ++  Y+ +I  LC  ++++EA ++F +M + 
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             + D ++Y  LIN  C+  R++D   +  +M   GL      +  +++G  + G  D++
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
             F      +  SP                              D  ++NI +  LC+N 
Sbjct: 385 QEFFSQMDFFGISP------------------------------DIWTYNILLGGLCDNG 414

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           E+ KA  +   M    +  D  TY+  + G CK    E+A  +F  +S + L  D ++Y+
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 482 KLVEGLCQVEKITEAVEVFCCMS-----KNGCSLSSSSFNI 517
            ++ GLC    + E   ++  M      KN C+LS     +
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL 515



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 175/420 (41%), Gaps = 40/420 (9%)

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DK 368
           E L      +++L+DA D+  DM+     P+   F  ++  + ++ K+D  ++  +  + 
Sbjct: 54  ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113

Query: 369 CGYVTSPH--NALLECCCNAGKFFLAKCILEKM------ADR--------------KIAD 406
            G     +  N ++ C C   +  LA  IL KM       DR              +++D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 407 CDS----------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
             S                +N  I  LC+ + +  A++    +    + P+  TY+A V 
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C    + DA R+   +  + +  + I+YS L++   +  K+ EA E+F  M +     
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              +++ LI GLC+  ++D+A ++  L  S G      +Y  ++ G  K +R +D + + 
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G   +   Y  LIQ   +   +     FF+ M   G+ PD  T   LL GL D 
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L         +      LD   Y  +I G+ K G   +A  L   +  KG  PD  T+
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 6/294 (2%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++NI I   C   ++  A  +LG+M+     PD  T  + V G C+     DA+ + 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++       D ++Y+ +++ LC+ +++ +A + F  + + G   +  ++  L+ GLC  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDV 582
            +   A RL S       +    TY+ ++   VK   +  AK+L   + +M ++    D+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP---DI 295

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LI  +   +++ +    F++MV  G + D  +  +L++G     ++        +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +     V ++  YN LI G ++ G   +A      M   G  PD  T+ +L+G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 1/247 (0%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++   LV G C+  ++++AV +   M + G      ++N +I  LC  ++V+ A    
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TYT ++ GL    R  D   +L+ M+ +    +V  Y  L+ +  + 
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+ +    F  MV+  + PD  T  SL++GL    ++   +   + +VS   + D   Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSF 714
           N LING  K         L   M  +G V +  T+  L+ G     ++D  +  F    F
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393

Query: 715 PDSVSDI 721
                DI
Sbjct: 394 FGISPDI 400



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 112/273 (41%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++  A +L   MV S   P    ++  +    KL  Y+  + + +++    +  D  +++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++   C   +++ A+ +   M K G      +   L+ G C   +V  A+ L       
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  I+  L K +R  D      ++  +G   +V  Y  L+  +   ++  D 
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           A   + M+K  + P+  T  +LL       ++        ++V  S   D   Y+ LING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L       +A+ + DLM+ KG + D  ++  L+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 222/509 (43%), Gaps = 39/509 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ E+V  G+ P   T   L++        +      R+M ++G  P++  F +VIKGL+
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL 372

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + R  D++ +L  + D G+  ++  Y C+I  LC+  KL EA+ L+  M+   + P  +
Sbjct: 373 RDKRWKDAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  L+   CE  R+D+A  +  +M   G  P +  +  +++G  +   FD +   L   
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALL--- 488

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                   N + +   + G +                   ++NI I  L     + +  E
Sbjct: 489 --------NEMRQNGVSCGDY-------------------TYNILINGLYMVNRVCEVDE 521

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +L R +    VP   TY++ + G  K      A  ++RQ+  + +  + ++Y+  ++G C
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +      AV++   + ++G     +++N  I   C    + +A+    L    G +   +
Sbjct: 582 RTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVT 641

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y   + G   L+   +       M+ +    D E Y  LI   S+   +      ++ M
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS----MYNILINGLWK 664
           +   ++PD +T  +L HGL     +     G  +L+ D   LD S     YN+LIN   +
Sbjct: 702 MANHVIPDDKTFTALTHGLCRSGDI----DGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           +G   +A  L D ML  G VPD TT+ +L
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/583 (23%), Positives = 240/583 (41%), Gaps = 80/583 (13%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y  MV  G+VP+  +   LL           AL  F  M  KGC  +++ +++VI+  + 
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
                D+V +  EM   G++ +   Y   I  LC+    + A+++   MR     P ELT
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 310 YEELINCLC------ENLRLDD------------------------------ANDILEDM 333
           Y  +++ L       E LRL D                              A D+ +++
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKF 389
           +  G+TPT+  +  +++G    G  DE+       +E      T   N +++      ++
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A  +L+ + D  + D  ++   I WLC+++++ +A  L  +M  + V P   TY + +
Sbjct: 378 KDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
           LG C+    ++AL+++ ++  +    + ++Y+ L++G  + +    A  +   M +NG S
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++NILI GL ++ +V +   +     S G   TT TY  I+ G VK         +
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 570 LAQMLVEG--------------------CAL---------------DVEAYCILIQSMSE 594
             QM  +G                    C L               D+ AY   I +  +
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           Q  +     F  +++K GL PD     S + G  +   +   S     ++    V D+ +
Sbjct: 618 QGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEI 677

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGL 692
           Y  LI+G  K G  + A  L   M+    +PD     A THGL
Sbjct: 678 YTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGL 720



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 188/428 (43%), Gaps = 7/428 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN+V+  ++ +KR + D + + K +V  G VP+V T   L+  L +  ++  A++ + +M
Sbjct: 364 FNLVIKGLLRDKR-WKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKM 421

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G  P+  T+  ++ G     R+D+++ +  EM D G       YT ++    ++   
Sbjct: 422 KEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAF 481

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + A  L   MR   +   + TY  LIN L    R+ + +++L+  +  G  PT   +  I
Sbjct: 482 DNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSI 541

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA-KCILEKMADRK 403
           + G  + G    +            +P    + + ++  C      LA K ++    D  
Sbjct: 542 INGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGI 601

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N  I   C+   + +A   L  ++   + PD   Y++FV G   L    +A +
Sbjct: 602 QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASK 661

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            +  +  Q +V D+  Y+ L++G  +V  +  A+E++  M  N       +F  L +GLC
Sbjct: 662 FYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLC 721

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               +D A RL         S    TY  ++   V+  + ++   +  +ML  G   D  
Sbjct: 722 RSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDT 781

Query: 584 AYCILIQS 591
            Y IL ++
Sbjct: 782 TYDILPRT 789


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 204/444 (45%), Gaps = 5/444 (1%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K G  P+  T + L+       R+  A+    RM +    P+  T   +I GL    RV 
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +++ ++  M + G Q +   Y  ++  LC+      A+ LF+ M   ++    + Y  +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           + LC++   DDA  +  +M + G+      +  ++ GLC  GK+D+    L +  G    
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312

Query: 375 PH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL 429
           P     +AL++     GK   AK +  +M  R IA D  ++N  I   C+   + +A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              MV     PD  TYS  +   CK    +D +R+FR++S++ L+ ++I+Y+ LV G CQ
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             K+  A E+F  M   G   S  ++ IL+ GLC   +++KA+ +      S  +     
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  I+ G+    +  D   +   +  +G   DV  Y ++I  + ++  L +  + F  M 
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

Query: 610 KAGLVPDRETMLSLLHGLADGSQL 633
           + G  PD  T   L+     GS L
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGL 576



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/548 (23%), Positives = 247/548 (45%), Gaps = 22/548 (4%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + +++ M+++  +P     N L   +  T + +  L   + M   G   +  T  I+I
Sbjct: 53  DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  ++  + S+LG  + LG + +   ++ ++   C E ++ EA+ L   M  +   
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +T   LIN LC   R+ +A  +++ M+  G  P +  +  ++  LC+ G    +++ 
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 365 L----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
                E         ++ +++  C  G F  A  +  +M  + I AD  +++  I  LC 
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           + +     ++L  M+  +++PD  T+SA +    K     +A  ++ ++  + +  D+I+
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G C+   + EA ++F  M   GC     +++ILI   C  ++VD  +RL     
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412

Query: 540 SSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           S G    T TY  ++LG     KL  AK+L     +M+  G    V  Y IL+  + +  
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELF---QEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +L      F  M K+ +         ++HG+ + S++    S    L       D   YN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-----------EEIDSR 705
           ++I GL K+G  S+A  L   M   G  PD  T+ +L+ + +G           EE+   
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589

Query: 706 RFAFDSSS 713
            F+ DSS+
Sbjct: 590 GFSADSST 597



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 219/512 (42%), Gaps = 20/512 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           YKE ++ GIV                 ++  A+D F  M +    P    F  +   +  
Sbjct: 38  YKERLRNGIV---------------DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVAR 82

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             + D  +     M   GI+ ++   T +I   CR+ KL  A  +      L   PD +T
Sbjct: 83  TKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT 142

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           +  L+N  C   R+ +A  +++ M+ +   P       ++ GLC  G+  E++  ++   
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
            Y   P    +  +L   C +G   LA  +  KM +R I A    ++I I  LC++    
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  L   M +  +  D  TYS+ + G C    ++D  ++ R++  ++++ D +++S L+
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +   +  K+ EA E++  M   G +  + ++N LI G C    + +A ++  L  S G  
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY+ ++    K +R  D + +  ++  +G   +   Y  L+    +  KL      
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  MV  G+ P   T   LL GL D  +L+       K+      L   +YNI+I+G+  
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                 A  L   +  KG  PD  T+ +++G 
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 5/393 (1%)

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           +L+Y+E +     +++++DA D+ E MI     PT   F  +   +    ++D  + F +
Sbjct: 35  KLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94

Query: 367 ----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
               +   +       ++ C C   K   A  +L +        D  +++  +   C   
Sbjct: 95  GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + +A  L+ RMV     PD  T S  + G C      +AL +  ++       D ++Y 
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC+      A+++F  M +     S   ++I+I  LC     D A+ L +     
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      TY+ ++ GL    +  D   +L +M+      DV  +  LI    ++ KL + 
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              +N M+  G+ PD  T  SL+ G    + LH  +   + +VS     D   Y+ILIN 
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             K         L   +  KG +P+  T+  LV
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 13/288 (4%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           F   +DVF V  G ++E K        +Y EM+  GI P+  T N L++   + N +  A
Sbjct: 318 FSALIDVF-VKEGKLLEAKE-------LYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
              F  M  KGC P+  T+ I+I       RVDD + +  E+   G+      Y  ++  
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C+  KL  A  LF+ M +  + P  +TY  L++ LC+N  L+ A +I E M    +T  
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
             ++  I+ G+C   K D++ +           P    +N ++   C  G    A  +  
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549

Query: 398 KMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           KM  D    D  ++NI IR       +  + EL+  M V     D +T
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 234/520 (45%), Gaps = 20/520 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +KEM + G +PNV T N +++   +  R + A    R M  KG  PN  TF ++I GL  
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           + R+ ++  +L EM   G   +   Y  ++   C+E    +A+ L   M    L P+ +T
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-- 367
           Y  LIN +C+   L+ A +  + M V GL P +  +  I+ G  + G  DE+   L +  
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185

Query: 368 KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
           + G++ S   +NAL+   C  G+   A  +L+ M  + +  D  S++  I     N+E+ 
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+++   M+  SV+PD  TYS+ + G C+     +A  +F+++    L  D  +Y+ L+
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              C+   + +A+ +   M + G    + ++N+LI GL    +  +A RL    +   + 
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSI 365

Query: 545 YTTSTYTKIM-----------LGLVKLQRAKDLL----VVLAQMLVEGCALDVEAYCILI 589
            +  TY  ++           + LVK    K L+     V   M+ +    +   Y ++I
Sbjct: 366 PSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVII 425

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
                   +      +  MV    VP   T+L+L+  L        ++  I  ++   ++
Sbjct: 426 HGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKL 485

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
            D+ +  +L+    KEG       LL  M   G +P   T
Sbjct: 486 TDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 211/483 (43%), Gaps = 34/483 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+     VLV M+  G+      +N ++    +E   F   + ++ EMV+ G+ PNV T 
Sbjct: 68  RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGN-FHQALVLHAEMVRNGLSPNVVTY 126

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L+  + +   +  A++ F +MH +G CPN RT+  +I G      +D++  +L EM  
Sbjct: 127 TSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTR 186

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G    +  Y  +I   C   ++EEAI L + M    ++PD ++Y  +I+    N  LD 
Sbjct: 187 SGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDR 246

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A  +  +MI   + P    +  +++GLCE  +  E+ +  ++       P    +  L+ 
Sbjct: 247 AFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLIN 306

Query: 382 CCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G    A  + ++M  +  + D  ++N+ I  L +    ++A  LL ++     +P
Sbjct: 307 AYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIP 366

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
              TY+  +   C  CN E     F+   A            LV+G C    + EA +VF
Sbjct: 367 SAVTYNTLI-ENC--CNIE-----FKSAVA------------LVKGFCMKGLMDEADQVF 406

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M       + + +N++I+G C +  V KA +L    Y          +T  +L LVK 
Sbjct: 407 ESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKL----YKEMVHVDFVPHTVTVLALVKA 462

Query: 561 QRAKDLLVVLAQM---LVEGCAL-DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
              + +   L ++   ++  C L D E   +L++   ++  +         M K GL+P 
Sbjct: 463 LFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPS 522

Query: 617 RET 619
             T
Sbjct: 523 TGT 525



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 30/404 (7%)

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
            +R FK M     +P+ +TY  +I+  C+  R D+A   L  M + GL P    F  I+ 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW 410
           GLC  G+  E+                              ++ ++E      + D  ++
Sbjct: 62  GLCRDGRLKET------------------------------SEVLVEMSRKGYVPDEVTY 91

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  +   C+     +A  L   MV + + P+  TY++ +   CK  N   A+  F Q+  
Sbjct: 92  NTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHV 151

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + L  +  +Y+ ++ G  Q   + EA  V   M+++G   S  ++N LI G CV+ ++++
Sbjct: 152 RGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEE 211

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           AI L       G      +Y+ I+ G  + Q       +  +M+ +    D   Y  LIQ
Sbjct: 212 AIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQ 271

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
            + EQ +L +    F  M+   L PD  T  +L++       L+      ++++    + 
Sbjct: 272 GLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLP 331

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           D+  YN+LINGL K+  + +A  LL  +     +P A T+  L+
Sbjct: 332 DAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLI 375



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 152/317 (47%), Gaps = 7/317 (2%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I  LC +  +++  E+L  M     VPD  TY+  V G CK  N+  AL +  ++
Sbjct: 55  TFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               L  + ++Y+ L+  +C+   +  A+E F  M   G   +  ++  +I G      +
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D+A R+ +    SG   +  TY  ++ G   L R ++ + +L  M+ +G   DV +Y  +
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 589 IQSMSEQNKLKDCALFFNV-MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           I   +   +L D A    V M+   ++PD  T  SL+ GL +  +L        ++++  
Sbjct: 235 ISGFARNQEL-DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSR 705
              D   Y  LIN   KEG  ++A +L D M+ KG++PDA T+ +L+   +      ++R
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353

Query: 706 RF---AFDSSSFPDSVS 719
           R     F   S P +V+
Sbjct: 354 RLLLKLFYDDSIPSAVT 370



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 55/130 (42%)

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L    +M   GC  +V  Y  +I    +  +  +   F   M   GL P+  T   +++G
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L    +L   S  + ++     V D   YN L+NG  KEG   QA  L   M+  G  P+
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 687 ATTHGLLVGS 696
             T+  L+ S
Sbjct: 123 VVTYTSLINS 132


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 228/476 (47%), Gaps = 13/476 (2%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREAL--ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
            G +EE     +NMV   + NV + +   +L+  F    +   A ++L  +   G    V
Sbjct: 115 TGELEEGFKFLENMV--YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
             +NV++    +      +       + +  + P+V T N +L  L ++ +++ A++   
Sbjct: 173 ITYNVMISGYCKA----GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           RM ++ C P+  T+ I+I+    +S V  ++ +L EM D G   ++  Y  ++  +C+E 
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +L+EAI+    M +    P+ +T+  ++  +C   R  DA  +L DM+  G +P+   F 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++  LC  G    +++ LE    +   P    +N LL   C   K   A   LE+M  R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 403 K-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
               D  ++N  +  LC++ ++  A E+L ++      P   TY+  + G  K      A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           +++  ++ A+ L  D+I+YS LV GL +  K+ EA++ F    + G   ++ +FN ++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LC  R+ D+AI       + G     ++YT ++ GL     AK+ L +L ++  +G
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 227/510 (44%), Gaps = 44/510 (8%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F F+ + MV  G VP++     L+       +   A      +   G  P+  T+ ++I 
Sbjct: 122 FKFL-ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G      +++++S+L  M    +  ++  Y  I+  LC   KL++A+ +   M   D  P
Sbjct: 181 GYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +TY  LI   C +  +  A  +L++M   G TP    +  +V G+C+ G+ DE++ FL
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
            D       P    HN +L   C+ G++  A+ +L  M  +  +    ++NI I +LC  
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             + +A ++L +M      P+  +Y+  + G CK    + A+    ++ ++    D ++Y
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++  LC+  K+ +AVE+   +S  GCS    ++N +I GL    K  KAI+       
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK------- 470

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                           L+   RAKDL              D   Y  L+  +S + K+ +
Sbjct: 471 ----------------LLDEMRAKDL------------KPDTITYSSLVGGLSREGKVDE 502

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              FF+   + G+ P+  T  S++ GL    Q       +  +++     + + Y ILI 
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           GL  EG+  +A  LL+ +  KG +  ++  
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSSAE 592



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 183/383 (47%), Gaps = 16/383 (4%)

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
           L++    LE+M+  G  P       ++RG C +GK  ++   LE   G    P    +N 
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++   C AG+   A  +L++M+     D  ++N  +R LC++ ++++A E+L RM+    
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS--PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD  TY+  +   C+      A+++  ++  +    D ++Y+ LV G+C+  ++ EA++
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
               M  +GC  +  + NI++  +C   +   A +L +     G S +  T+  ++  L 
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 559 K---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           +   L RA D+L  + Q    GC  +  +Y  L+    ++ K+     +   MV  G  P
Sbjct: 356 RKGLLGRAIDILEKMPQ---HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSD--SEVLDSSMYNILINGLWKEGLTSQASY 673
           D  T  ++L  L    ++      +N+L S   S VL +  YN +I+GL K G T +A  
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT--YNTVIDGLAKAGKTGKAIK 470

Query: 674 LLDLMLGKGWVPDATTHGLLVGS 696
           LLD M  K   PD  T+  LVG 
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGG 493



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 210/456 (46%), Gaps = 8/456 (1%)

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           ++ ++    +++    L  M   G   ++   T +I   CR  K  +A ++ +++     
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV- 362
           +PD +TY  +I+  C+   +++A  +L+ M V   +P    +  I+R LC+ GK  +++ 
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225

Query: 363 ---NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
                L+  C      +  L+E  C       A  +L++M DR    D  ++N+ +  +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +   + +A + L  M  S   P+  T++  +   C    + DA ++   +  +      +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +++ L+  LC+   +  A+++   M ++GC  +S S+N L++G C  +K+D+AI      
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S G      TY  ++  L K  + +D + +L Q+  +GC+  +  Y  +I  +++  K 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                  + M    L PD  T  SL+ GL+   ++       ++        ++  +N +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + GL K   T +A   L  M+ +G  P+ T++ +L+
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 172/384 (44%), Gaps = 6/384 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++ S  +  ++  AM VL  M        V  + +++ A   +  G    + +  EM  
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRD 267

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P+V T N L+  + +  R++ A+     M   GC PN  T  I+++ + +  R  D
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L +M   G    +  +  +I  LCR+  L  AI + + M      P+ L+Y  L++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGY 371
             C+  ++D A + LE M+  G  P    +  ++  LC+ GK +++V  L       C  
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
           V   +N +++    AGK   A  +L++M  + +  D  +++  +  L    ++ +A +  
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
                  + P+  T+++ +LG CK    + A+     +  +    +  SY+ L+EGL   
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567

Query: 491 EKITEAVEVFCCMSKNGCSLSSSS 514
               EA+E+   +   G    SS+
Sbjct: 568 GMAKEALELLNELCNKGLMKKSSA 591



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 16/318 (5%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  +R +    E+ + ++ L  MV    VPD    +  + G C+L     A ++   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
              V D I+Y+ ++ G C+  +I  A+ V   MS    S    ++N ++  LC   K+ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ +              TYT ++    +       + +L +M   GC  DV  Y +L+ 
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL----HLVSSGINKLVSD 646
            + ++ +L +   F N M  +G  P+  T   +L  +    +      L++  + K  S 
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEE 701
           S V     +NILIN L ++GL  +A  +L+ M   G  P++ +     HG      +   
Sbjct: 343 SVV----TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398

Query: 702 IDSRRFAFDSSSFPDSVS 719
           I+          +PD V+
Sbjct: 399 IEYLERMVSRGCYPDIVT 416



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 1/171 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  M+  L   G VE+   +   +  +    V     +++       +   A+++L  M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            +   K     ++ ++G +  E +   + +  + E  + GI PN  T N ++  L ++ +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGK-VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
            + A+D    M  +GC PN  ++ I+I+GL       +++ +L E+ + G+
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 201/435 (46%), Gaps = 31/435 (7%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           + R F     +  EM K GIVP+    N +++ L +  R++SAL  +R M +  C P+  
Sbjct: 45  KARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVI 103

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ I++  L  ++R+ D+  IL +M + G    +  Y  +I   C+   ++EA+ LF  M
Sbjct: 104 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 163

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD  TY  LI+  C+  R  D   +L++M+  G  P    +  ++  L + GK+
Sbjct: 164 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 223

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
            ++ N  +            +L   C    F                   ++N+ I   C
Sbjct: 224 IDAFNLAQ-----------MMLRRDCKPSHF-------------------TFNLMIDMFC 253

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +  ++  AYEL   M     +PD  TY+  + G C+    +DA ++  +++      D +
Sbjct: 254 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 313

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ +V GLC+  ++ EA EV+  +   G  L   + + LI GLC  R++D A +L    
Sbjct: 314 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 373

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +G++     YT ++ G  K  +    L   ++ML +GC   V  Y I+I  + +  ++
Sbjct: 374 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 433

Query: 599 KDCALFFNVMVKAGL 613
           +D  +    M++ G+
Sbjct: 434 RDGCMLLKTMLERGV 448



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 199/477 (41%), Gaps = 31/477 (6%)

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N LL       + + A D F+      C P+S T+  +I G         +  +L EM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI    + Y  II  LC   +++ A+  ++ M+     P  +TY  L++ LC++ R+ D
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A+ ILEDMI  G  P    +  ++ G C++G  DE+V              N +LE  C+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLF-----------NQMLENSCS 169

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
              F                   ++NI I   C+ E  +   +LL  MV     P+  TY
Sbjct: 170 PDVF-------------------TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  +    K   Y DA  + + +  +       +++ +++  C+V ++  A E+F  M+ 
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 270

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            GC     ++NI+I G C   ++D A +L      +G      TY  I+ GL K  +  +
Sbjct: 271 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 330

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
              V   +   G  LDV     LI  + +  +L D       M + G  PD      L+H
Sbjct: 331 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 390

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           G     QL    +  ++++    V     Y+I+I+ L K         LL  ML +G
Sbjct: 391 GFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 190/422 (45%), Gaps = 4/422 (0%)

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C++    R+ K +EA  LFK        PD +TY  LIN  C+      A  +L++M   
Sbjct: 3   CLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR 62

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED---KCGYVTSPHNALLECCCNAGKFFLAK 393
           G+ P + V+  I++GLC+ G+ D ++    D    C      +  L++  C + +   A 
Sbjct: 63  GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDAS 122

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            ILE M +   A +  ++N  I   C+   + +A  L  +M+ +S  PD  TY+  + G 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK    +D  ++ +++       + I+Y+ L++ L +  K  +A  +   M +  C  S 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +FN++I   C + ++D A  L  L    G      TY  ++ G  +  R  D   +L +
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   GC  DV  Y  ++  + + +++ +    + V+   G   D  T  +L+ GL    +
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 362

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L      + ++  +    D   Y ILI+G  K     ++      ML KG VP   T+ +
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422

Query: 693 LV 694
           ++
Sbjct: 423 VI 424



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 4/288 (1%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           ++ ++AY+L    +     PD  TYS  + G CK  +++ A R+  ++  + +V  +  Y
Sbjct: 12  KKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVY 71

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + +++GLC   ++  A+  +  M ++ C+ S  ++ IL+  LC   ++  A  +      
Sbjct: 72  NTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIE 130

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           +G +    TY  ++ G  KL    + +V+  QML   C+ DV  Y ILI    +Q + +D
Sbjct: 131 AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQD 190

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILI 659
            A     MVK G  P+  T  +L+  L    + ++ +  + +++   +   S   +N++I
Sbjct: 191 GAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK-YIDAFNLAQMMLRRDCKPSHFTFNLMI 249

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRR 706
           +   K G    A  L  LM  +G +PD  T+ +++ G+     ID  R
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 3/228 (1%)

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+    + +K  EA ++F       CS  S +++ LI G C  R   +A RL       G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                + Y  I+ GL    R    LV    M    CA  V  Y IL+ ++ +  ++ D +
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS 122

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
           L    M++AG  P+  T  +L++G      +       N+++ +S   D   YNILI+G 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV--GEEIDSRRFA 708
            K+      + LL  M+  G  P+  T+  L+ S V  G+ ID+   A
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 230


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 222/473 (46%), Gaps = 7/473 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GFK S+ VF+ ++ +  +  R    F   Y  M + G++P ++T N LL +  + NR E+
Sbjct: 147 GFKSSI-VFDYLIKSCCDMNRADEAFECFYT-MKEKGVLPTIETCNSLLSLFLKLNRTEA 204

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   +  M +     +  TF I+I  L    ++  +   +G M   G++  +  Y  I+ 
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C   ++E A  +   M+   + PD  TY  LI+ +C+  RL++A+ I E+M+  GL P
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
           +  ++  ++ G C  G  D +  + ++      SP    +N+L+       +   A+C++
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +++ ++ I+ D  ++NI I   C     +KA+ L   M+ S + P   TY++ +    K 
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A  +F++++++ ++ D I ++ L++G C    +  A E+   M +        +F
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N ++ G C   KV++A  L       G      ++  ++ G  +    KD   V  +ML 
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            G    V  Y  L+Q + +  +          MV  G+ PD  T  +L+ G+A
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 207/495 (41%), Gaps = 40/495 (8%)

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            +YL++   + NR + A + F  M +KG  P   T   ++   +  +R + +  +  EMF
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
            L I+  +  +  +I +LC+E KL++A      M    + P+ +TY  +++  C + R++
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
            A+ IL  M    + P    +  ++ G+C+ G+ +E+    E+       P    +N L+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +  CN G   +A    ++M  + I+    ++N  I  L   +   +A  ++  +    + 
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G C+  N + A  +  ++ A  +     +Y+ L+  L +  ++ EA ++
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  ++  G       FN LI G C    V  A  L              T+  IM G  +
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             + ++   +  +M   G   D  ++  LI   S +  +KD     N M+  G  P   T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP---T 570

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
           +L+                                YN L+ GL K      A  LL  M+
Sbjct: 571 VLT--------------------------------YNALVQGLCKNQEGDLAEELLKEMV 598

Query: 680 GKGWVPDATTHGLLV 694
            KG  PD TT+  L+
Sbjct: 599 SKGMTPDDTTYFTLI 613



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 177/395 (44%), Gaps = 35/395 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++     +G VE  + +   M +++         SL+       R+  A ++   M
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETN 216
              G + S  ++N ++       +G  D    YK EM+K GI P + T N L+  LF   
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCN--KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQ 375

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R + A    + + +KG  P++ T+ I+I G    +    +  +  EM   GI+     YT
Sbjct: 376 RTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYT 435

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++ +L ++N+++EA  LFK + +  ++PD + +  LI+  C N  +  A ++L+DM  +
Sbjct: 436 SLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRM 495

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
            + P +  F  I++G C  GK +E                               A+ + 
Sbjct: 496 KVPPDEVTFNTIMQGHCREGKVEE-------------------------------ARELF 524

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M  R I  D  S+N  I       +I+ A+ +   M+ +   P   TY+A V G CK 
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
              + A  + +++ ++ +  D  +Y  L+EG+ +V
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 172/391 (43%), Gaps = 20/391 (5%)

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL--LECCCNAGKFFL-------AKC 394
           VF  +++  C++ + DE+      +C Y       L  +E C +    FL       A  
Sbjct: 153 VFDYLIKSCCDMNRADEAF-----ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M   +I +   ++NI I  LC+  +++KA + +G M  S V P+  TY+  V G C
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                E A  +   +  Q +  DS +Y  L+ G+C+  ++ EA ++F  M + G   S+ 
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            +N LI G C    +D A   +      G S T STY  ++  L   QR  +   ++ ++
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G + D   Y ILI         K   L  + M+ +G+ P ++T  SLLH L+  +++
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                   K+ S+  + D  M+N LI+G         A  LL  M      PD  T   +
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 694 VGSSVGE-EIDSRRFAFDSSSF----PDSVS 719
           +     E +++  R  FD        PD +S
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHIS 538



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 195/468 (41%), Gaps = 81/468 (17%)

Query: 136 SLVFSFV-----NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           S+VF ++     +  R + A      M   G   +++  N +L   ++  R  A +V +Y
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV-LY 209

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            EM +  I  +V T N ++ VL +  +++ A D    M   G  PN  T+  ++ G  ++
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            RV+ + +IL  M    I+ +   Y  +I  +C++ +LEEA ++F+ M    L P  + Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+  C    LD A+   ++M+  G++PT   +  ++  L    + DE+   +++   
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 371 YVTSP----HNALLEC---CCNAGKFFL------------------------AKCILEKM 399
              SP    +N L+     C NA K FL                        +K    K 
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 400 AD---RKI------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           AD   +KI       D   +N  I   C N  ++ A+ELL  M    V PD  T++  + 
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSIS------------------------------- 479
           G C+    E+A  +F ++  + +  D IS                               
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569

Query: 480 ----YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
               Y+ LV+GLC+ ++   A E+   M   G +   +++  LI G+ 
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 147/349 (42%), Gaps = 48/349 (13%)

Query: 58  RHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           R  + PD      LI  +     L  A KIF+ + +QK  + +A  Y  +I      GN+
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           +        M+K+          SL+ +     R + A  ++  +   G       +N++
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 173 LGAI---VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           +         K+ F     ++ EM+ +GI P   T   LL VL + NR++ A D F+++ 
Sbjct: 403 INGYCRCANAKKAF----LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
            +G  P+   F  +I G  +NS V  +  +L +M  + +  +   +  I+   CRE K+E
Sbjct: 459 SEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 290 EAIRLFKMMRALDLMPDE-----------------------------------LTYEELI 314
           EA  LF  M+   + PD                                    LTY  L+
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             LC+N   D A ++L++M+  G+TP D  +  ++ G+ +V   DE+ N
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%)

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           SS  F+ LI   C M + D+A          G   T  T   ++   +KL R +   V+ 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           A+M        V  + I+I  + ++ KLK    F   M  +G+ P+  T  +++HG    
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++    + +  +       DS  Y  LI+G+ K+G   +AS + + M+ KG  P A  +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 691 GLLV 694
             L+
Sbjct: 330 NTLI 333



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 6/221 (2%)

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           SI +  L++  C + +  EA E F  M + G   +  + N L+     + + + A  L +
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 537 LAYS---SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
             +      + YT +    ++    KL++AKD +     M   G   ++  Y  ++    
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV---GHMETSGVKPNIVTYNTIVHGYC 267

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
              +++        M +  + PD  T  SL+ G+    +L   S    ++V       + 
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +YN LI+G   +G    AS   D ML KG  P  +T+  L+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 159/695 (22%), Positives = 284/695 (40%), Gaps = 95/695 (13%)

Query: 24  ISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNT---------- 73
            +S  C   +P  S ++   S Q  D  +  + ++ +L  D  I VL ++          
Sbjct: 76  FTSFLCIFRLPFVSYSNANNSFQYLDIGSLRKIIQQDLWNDPKIVVLFDSALAPIWVSKI 135

Query: 74  -----NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
                 D   ALK FKW   Q  F+HT ++YC ++  +  A     M     + VKE   
Sbjct: 136 LLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRA----RMYTDAHDTVKEVIM 191

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA---- 184
           N R   + + F   N + +  + R +    SG F +   VF V LG + E    F+    
Sbjct: 192 NSR---MDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVF-VELGLLEEANECFSRMRN 247

Query: 185 ----------DFVF--------------VYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
                     +F+                + +M+ AGI P+V T N +++ L +   +E+
Sbjct: 248 FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLEN 307

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           +   F +M + G  P+  T+  +I G      +++  S+  EM D+G   ++  Y  +I 
Sbjct: 308 SRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLIN 367

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C+  K+  A   F  M+   L P+ +TY  LI+  C+   +  A  +  DM   GL P
Sbjct: 368 CYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLP 427

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKC 394
            +  +  ++   C+ G   E+   L D      K   VT  + ALL+  C AG+   A+ 
Sbjct: 428 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT--YTALLDGLCKAGRMIEAEE 485

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +   M    I+ +   +   +    + E +  A ++L +M   ++ PD   Y + + G C
Sbjct: 486 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 545

Query: 454 -----------------------------------KLCNYEDALRVFRQVSAQSLVLDSI 478
                                              K     DAL  F+++    +    +
Sbjct: 546 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y  L++GLC+   +  AV+ FC M   G   + + +  LI GLC    ++ A +L    
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G +   + +T ++ G +K    ++ LV++++M       D+  Y  L+   S+  +L
Sbjct: 666 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 725

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
                FFN M++ G++P+    + LL       QL
Sbjct: 726 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 760



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 1/307 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N LL     +G   L +     M    IA    ++N+ I +LC+  ++  +  L  +M  
Sbjct: 258 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 317

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + PD  TY++ + G  K+ + E+   +F ++     V D I+Y+ L+   C+ EK+  
Sbjct: 318 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 377

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E F  M  NG   +  +++ LI   C    +  AI+L      +G      TYT ++ 
Sbjct: 378 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLID 437

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              K     +   +L  ML  G  L++  Y  L+  + +  ++ +    F  M+K G+ P
Sbjct: 438 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +++   +L+HG     ++      + ++   +   D  +Y  +I G   +    +   +L
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL 557

Query: 676 DLMLGKG 682
           + M  +G
Sbjct: 558 EEMKSRG 564



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/408 (19%), Positives = 156/408 (38%), Gaps = 32/408 (7%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           LEEA   F  MR    +P   +   L++ L ++           DMI  G+ P+  VF  
Sbjct: 235 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPS--VFT- 291

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-D 406
                                       +N +++  C  G    ++ +  +M +  ++ D
Sbjct: 292 ----------------------------YNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 323

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I    +   + +   L   M     VPD  TY+  +   CK      A   F 
Sbjct: 324 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 383

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++    L  + ++YS L++  C+   +  A+++F  M + G   +  ++  LI   C   
Sbjct: 384 EMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAG 443

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            + +A +L +    +G      TYT ++ GL K  R  +   V   ML +G + + + Y 
Sbjct: 444 NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYT 503

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            L+    +  +++D       M +  + PD     S++ G     +L      + ++ S 
Sbjct: 504 ALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               +  +   +I+  +K G +S A      M   G      T+ +L+
Sbjct: 564 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 611



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 130/299 (43%), Gaps = 34/299 (11%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L  AG + E E + ++M+K+     ++   +LV  ++   R+  AM++L  M
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525

Query: 158 NSGGFKLSVDVFNVVLGA------------IVEE--KRGFA------------------- 184
                K  + ++  ++              I+EE   RG +                   
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585

Query: 185 -DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            D +  ++EM   G+   + T   L++ L +   +E A+D F RM   G  PN   +  +
Sbjct: 586 SDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSL 645

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I GL  N+ ++ +  +  EM   G+  +++ +T +I    +   L+EA+ L   M  L +
Sbjct: 646 IDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 705

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             D   Y  L++   +   L  A     +MI  G+ P + + + ++R   + G+ DE++
Sbjct: 706 EFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 214/461 (46%), Gaps = 12/461 (2%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V  FN+V+  + +E     +   ++  M   G  P+V T N L++   +   +E     
Sbjct: 199 NVFTFNIVIDFLCKEGE-LVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M K GC  +  T+  +I       R++ + S  GEM   G+   +  ++  +   C+
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           E  ++EA++LF  MR   +MP+E TY  L++  C+  RLDDA  +L++M+  GL P    
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 345 FVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFF-----LAKCILE 397
           +  +V GLC+ GK  E+ N L   ++ G      N LL      G F       A  +L 
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKA---NELLYTTLIHGHFMNNNSERALDLLN 434

Query: 398 KMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M ++ +  D   +   I  LC+++++ +A  LL +M    + P+   Y+  +    K  
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              +A+ +  ++       + ++Y  L++GLC+   I+EA+  F  M + G   +  ++ 
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYT 554

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI G C +  ++KA+ L +     G S     YT ++ G +K    +D   +  +M+  
Sbjct: 555 ALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIES 614

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
           G  LD+  Y   I      N +++     + M+  G+ PD+
Sbjct: 615 GLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDK 655



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 218/521 (41%), Gaps = 74/521 (14%)

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           VDTL   L +L +   ++ A+    R+ +    PN+RT   ++  L  N +      ++ 
Sbjct: 137 VDTL---LSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG----GLVR 189

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            +FDL     +  +  +I  LC+E +L EA  LF  M+A+   PD +TY  LI+   +  
Sbjct: 190 RLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 249

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
            L++   ++ +M   G                               C      +NAL+ 
Sbjct: 250 DLEEVEQLVSEMRKSG-------------------------------CAADVVTYNALIN 278

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
           C    G+   A     +M  + + A+  +++  +   C+   +++A +L  +M V  ++P
Sbjct: 279 CFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMP 338

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  TY++ V G CK    +DA+ +  ++  Q LV + ++Y+ +V+GLC+  K+ EA  V 
Sbjct: 339 NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVL 398

Query: 501 CCMSKNGCS-----------------------------------LSSSSFNILIYGLCVM 525
             M + G                                     L  S +  LI+GLC  
Sbjct: 399 SLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKD 458

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           +KVD+A  L       G    T  YT IM  L K  +  + + +L ++L  G   +V  Y
Sbjct: 459 QKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTY 518

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
           C LI  + +   + +    FN M + GL P+ +   +L+ G      L+     +N+++ 
Sbjct: 519 CALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMID 578

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               LD  +Y  LI+G  K+     A  L   M+  G   D
Sbjct: 579 KGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLD 619



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 122/569 (21%), Positives = 236/569 (41%), Gaps = 42/569 (7%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V + L+SL+    +H  ++ A+R L  +       +    N +L  +   ++G     
Sbjct: 134 PSVVDTLLSLL---ADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG---- 186

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            + + +     VPNV T N +++ L +   +  A   F RM   GC P+  T+  +I G 
Sbjct: 187 -LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGY 245

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
                +++   ++ EM   G   ++  Y  +I    +  ++E+A   F  M+   ++ + 
Sbjct: 246 GKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANV 305

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +T+   ++  C+   + +A  +   M V G+ P +  +  +V G C+ G+ D+++  L++
Sbjct: 306 VTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 365

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                   H  L                        + +  ++ + +  LC+  ++ +A 
Sbjct: 366 MV------HQGL------------------------VPNVVTYTVMVDGLCKEGKVAEAD 395

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            +L  M    V  +   Y+  + G     N E AL +  Q+  + + LD   Y  L+ GL
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSS--FNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           C+ +K+ EA  +   M+  GC L  ++  +  ++  L    K  +A+ L      SG   
Sbjct: 456 CKDQKVDEAKSLLHKMA--GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQP 513

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  ++ GL K     + +    +M   G   +V+AY  LI    +   L       
Sbjct: 514 NVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLM 573

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           N M+  G+  D+    SL+ G    + L    +   K++     LD   Y   I+G    
Sbjct: 574 NEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNM 633

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +  +A  +L  M+G G  PD T +  L+
Sbjct: 634 NMMQEARGVLSEMIGTGITPDKTVYNCLI 662


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 215/441 (48%), Gaps = 5/441 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + ++ +MVK+   P++   N LL  + +  + +  +   ++M   G   +  TF IVI
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +V  ++SILG+M  LG + +      ++   CR N++ +A+ L   M  +   
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD + Y  +I+ LC+  R++DA D  +++   G+ P    +  +V GLC   ++ ++   
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L D      +P    ++ALL+     GK   AK + E+M    I  D  +++  +  LC 
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCL 307

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           ++ I +A ++   MV    + D  +Y+  + G CK    ED +++FR++S + LV ++++
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G  Q   + +A E F  M   G S    ++NIL+ GLC   +++KA+ +     
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TYT ++ G+ K  + ++   +   + ++G   D+  Y  ++  +  +  L 
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487

Query: 600 DCALFFNVMVKAGLVPDRETM 620
           +    +  M + GL+ +  T+
Sbjct: 488 EVEALYTKMKQEGLMKNDCTL 508



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 181/383 (47%), Gaps = 39/383 (10%)

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMVKAGIVPN 201
           ++V+ A+ +L  M     KL  +   V +G++V     +   +D V +  +MV+ G  P+
Sbjct: 134 FQVSLALSILGKM----LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           +   N +++ L +T R+  A D F+ + +KG  PN  T+  ++ GL  +SR  D+  +L 
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +M    I   +  Y+ ++    +  K+ EA  LF+ M  + + PD +TY  L+N LC + 
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHD 309

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           R+D+AN + + M+  G         D+V                          +N L+ 
Sbjct: 310 RIDEANQMFDLMVSKG------CLADVV-------------------------SYNTLIN 338

Query: 382 CCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C A +      +  +M+ R  +++  ++N  I+   +  ++ KA E   +M    + P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  TY+  + G C     E AL +F  +  + + LD ++Y+ ++ G+C+  K+ EA  +F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 501 CCMSKNGCSLSSSSFNILIYGLC 523
           C +S  G      ++  ++ GLC
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 164/337 (48%), Gaps = 6/337 (1%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M+K  Y   R  + SLV  F    RV+ A+ ++  M   G+K  +  +N ++ ++ + KR
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
               F F +KE+ + GI PNV T   L+  L  ++R   A      M KK   PN  T+ 
Sbjct: 206 VNDAFDF-FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            ++   + N +V ++  +  EM  + I  ++  Y+ ++  LC  ++++EA ++F +M + 
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             + D ++Y  LIN  C+  R++D   +  +M   GL      +  +++G  + G  D++
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
             F      +  SP    +N LL   C+ G+   A  I E M  R++  D  ++   IR 
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +C+  ++ +A+ L   + +  + PD  TY+  + G C
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 175/420 (41%), Gaps = 40/420 (9%)

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DK 368
           E L      +++L+DA D+  DM+     P+   F  ++  + ++ K+D  ++  +  + 
Sbjct: 54  ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113

Query: 369 CGYVTSPH--NALLECCCNAGKFFLAKCILEKM------ADR--------------KIAD 406
            G     +  N ++ C C   +  LA  IL KM       DR              +++D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 407 CDS----------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
             S                +N  I  LC+ + +  A++    +    + P+  TY+A V 
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C    + DA R+   +  + +  + I+YS L++   +  K+ EA E+F  M +     
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              +++ L+ GLC+  ++D+A ++  L  S G      +Y  ++ G  K +R +D + + 
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G   +   Y  LIQ   +   +     FF+ M   G+ PD  T   LL GL D 
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L         +      LD   Y  +I G+ K G   +A  L   +  KG  PD  T+
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 133/294 (45%), Gaps = 6/294 (2%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++NI I   C   ++  A  +LG+M+     PD  T  + V G C+     DA+ + 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++       D ++Y+ +++ LC+ +++ +A + F  + + G   +  ++  L+ GLC  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDV 582
            +   A RL S       +    TY+ ++   VK   +  AK+L   + +M ++    D+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP---DI 295

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  L+  +   +++ +    F++MV  G + D  +  +L++G     ++        +
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +     V ++  YN LI G ++ G   +A      M   G  PD  T+ +L+G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 1/247 (0%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++   LV G C+  ++++AV +   M + G      ++N +I  LC  ++V+ A    
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TYT ++ GL    R  D   +L+ M+ +    +V  Y  L+ +  + 
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+ +    F  MV+  + PD  T  SL++GL    ++   +   + +VS   + D   Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSF 714
           N LING  K         L   M  +G V +  T+  L+ G     ++D  +  F    F
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393

Query: 715 PDSVSDI 721
                DI
Sbjct: 394 FGISPDI 400



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/273 (20%), Positives = 112/273 (41%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++  A +L   MV S   P    ++  +    KL  Y+  + + +++    +  D  +++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++   C   +++ A+ +   M K G      +   L+ G C   +V  A+ L       
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  I+  L K +R  D      ++  +G   +V  Y  L+  +   ++  D 
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           A   + M+K  + P+  T  +LL       ++        ++V  S   D   Y+ L+NG
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L       +A+ + DLM+ KG + D  ++  L+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 210/461 (45%), Gaps = 35/461 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G + ++  FN +L  +  + +   D V ++ EMVK G  P+V T + ++  L +      
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAK-IMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL   ++M +KGC PN   +  +I  L  +  V +++    EM   GI  ++  Y+ I+ 
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C   ++ EA  LFK M   +++P+++T+  LI+ LC+   + +A  + E M   GL P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
               +  +V G C   + DE                         A K F        + 
Sbjct: 184 DVYTYNALVDGYCSRSQMDE-------------------------AQKLF-------NIM 211

Query: 401 DRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
           DRK    +  S+NI I   C++  I +A  LL  M   S+ PD  TYS  + G C++   
Sbjct: 212 DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRP 271

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ++A  + +++ +  L+ + I+YS +++GLC+   + EA E+   M ++    +   + IL
Sbjct: 272 QEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTIL 331

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G+C   K++ A  L S  +  G   T  TYT ++ GL+K   + +   +  +M V GC
Sbjct: 332 IEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGC 391

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             +   Y ++IQ         +       MV  G   D  T
Sbjct: 392 LPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSST 432



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 191/401 (47%), Gaps = 31/401 (7%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+++L  M   G K +V  +N ++ ++ ++ R   + +  + EMVK GI P+V T + +L
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKD-RLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
                  R+  A   F++M ++   PN  TF I+I GL     + ++  +   M + G++
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++  Y  ++   C  ++++EA +LF +M      P+  +Y  LIN  C++ R+D+A  +
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
           L +M    LTP    +  ++RG C+VG+  E+   L++ C Y   P              
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLP-------------- 288

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
                           +  +++I +  LC++  + +A+ELL  M  S + P+   Y+  +
Sbjct: 289 ----------------NLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILI 332

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G C     E A  +F  +  + +    ++Y+ ++ GL +     EA E+F  M+ NGC 
Sbjct: 333 EGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCL 392

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +S ++N++I G         A+RL       G S  +ST+
Sbjct: 393 PNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTF 433



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 215/480 (44%), Gaps = 34/480 (7%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M K G  P   TF  ++ GL + +++ D+V +  EM  +G + ++  Y+ II  LC+   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
              A++L K M      P+ + Y  +I+ LC++  + +A D   +M+  G+ P    +  
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IAD 406
           I+ G C +G+ +E                               A  + ++M +R  I +
Sbjct: 121 ILHGFCNLGRVNE-------------------------------ATSLFKQMVERNVIPN 149

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++ I I  LC+   I +A+ +   M    + PD  TY+A V G C     ++A ++F 
Sbjct: 150 KVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFN 209

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +  +    +  SY+ L+ G C+  +I EA  +   MS    +    +++ L+ G C + 
Sbjct: 210 IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVG 269

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           +  +A  L     S G      TY+ ++ GL K     +   +L  M       ++  Y 
Sbjct: 270 RPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYT 329

Query: 587 ILIQSMSEQNKLKDC-ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
           ILI+ M    KL+    LF N+ VK G+ P   T   ++ GL  G   +       ++  
Sbjct: 330 ILIEGMCTFGKLEAARELFSNLFVK-GIQPTVVTYTVMISGLLKGGLSNEACELFREMAV 388

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           +  + +S  YN++I G  + G T  A  L++ M+GKG+  D++T  +L      +EI S+
Sbjct: 389 NGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQ 448



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 165/362 (45%), Gaps = 31/362 (8%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           MVKE  P       S++  F N  RVN A  +   M       +   F +++  +  +KR
Sbjct: 106 MVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC-KKR 164

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
             ++   V++ M + G+ P+V T N L++     ++++ A   F  M +KGC PN R++ 
Sbjct: 165 MISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYN 224

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           I+I G   + R+D++  +L EM    +  ++  Y+ ++   C+  + +EA  L K M + 
Sbjct: 225 ILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            L+P+ +TY  +++ LC++  LD+A ++L+ M    + P   ++  ++ G+C  GK + +
Sbjct: 285 GLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAA 344

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
                +                         K I   +         ++ + I  L +  
Sbjct: 345 RELFSN----------------------LFVKGIQPTVV--------TYTVMISGLLKGG 374

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
              +A EL   M V+  +P+  TY+  + G  +  +  +A+R+  ++  +    DS ++ 
Sbjct: 375 LSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFR 434

Query: 482 KL 483
            L
Sbjct: 435 ML 436


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 239/519 (46%), Gaps = 42/519 (8%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           K++   GI  N+ TLN ++       +   A     ++ K G  P++ TF  +I GL   
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 171

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +V  +V ++  M + G Q ++  Y  I+  +CR      A  + + M   ++  D  TY
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +I+ LC +  +D A  + ++M   G+  +   +  +VRGLC+ GK+++    L+D   
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 371 YVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P+    N LL+     GK   A  + ++M  R I+ +  ++N  +   C    + +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +L  MV +   PD  T+++ + G C +   +D ++VFR +S + LV ++++YS LV+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G CQ  KI  A E+F  M  +G      ++ IL+ GLC   K++KA+ +           
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI----------- 460

Query: 546 TTSTYTKIMLGLVKLQRAK-DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                         LQ++K DL +V+              Y  +I+ M +  K++D    
Sbjct: 461 -----------FEDLQKSKMDLGIVM--------------YTTIIEGMCKGGKVEDAWNL 495

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  +   G+ P+  T   ++ GL     L   +  + K+  D    +   YN LI    +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
           +G  + ++ L++ M   G+  DA++  +++   +  E+D
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELD 594



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 201/460 (43%), Gaps = 5/460 (1%)

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F   ++  I + + DD++++  EM        L  ++     + R  +    +   K + 
Sbjct: 56  FRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLE 115

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              +  +  T   +INC C   +   A  +L  ++ +G  P    F  ++ GLC  GK  
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVS 175

Query: 360 ESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           ++V      +E+ C      +N+++   C +G   LA  +L KM +R + AD  +++  I
Sbjct: 176 KAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTII 235

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC +  I  A  L   M    +     TY++ V G CK   + D   + + + ++ +V
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + I+++ L++   +  K+ EA E++  M   G S +  ++N L+ G C+  ++ +A  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             L   +  S    T+T ++ G   ++R  D + V   +   G   +   Y IL+Q   +
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             K+K     F  MV  G++PD  T   LL GL D  +L         L      L   M
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y  +I G+ K G    A  L   +  KG  P+  T+ +++
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 214/482 (44%), Gaps = 11/482 (2%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           + ++   ++Y +M  +GI P+  TLN LL  L   NR+   L     + ++G  P+  T+
Sbjct: 110 KHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTY 169

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM-- 298
             +IKGL    R+  +  +   M  LG       Y  ++  LCR   +  A++L + M  
Sbjct: 170 TTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLN 229

Query: 299 ----RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
                 ++  P  ++Y  +I+ LC++ R D+A D+ E+M V G+TPT   +  ++ G C 
Sbjct: 230 DSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCC 289

Query: 355 VGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
            GK++E+     +       P+    N L++  C  GK   AK +LE M  R I  +  +
Sbjct: 290 GGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 349

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I   C   ++  A EL   M      PD   Y+  + G CK    E+A++++  + 
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 D  +Y  L+ GL Q  K+ +A ++F  M   G       + I + GLC    + 
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 469

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A+ L +   S         +  ++ GL K  + +    +  ++  E    DV  Y I+I
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
                  ++    + F  M K G  PD+ T  +L+ G  +  +L  V   ++ +V     
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589

Query: 650 LD 651
           LD
Sbjct: 590 LD 591



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 197/475 (41%), Gaps = 24/475 (5%)

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A   F  M      P   +F  ++ GL           +  +M   GI  +      ++
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC  N++ E + +   +     +PD +TY  LI  LC   R+  A  +   M  +G T
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           P    +  +++GLC  G    ++             H  +L      G  F    I    
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKL-----------HQEMLNDSSLYGINFKPVVI---- 243

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                    S++I I  LC++    +A +L   M V  + P   +Y++ + G C    +E
Sbjct: 244 ---------SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWE 294

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A R+F ++  Q +  + ++++ L++ LC+  K+ EA ++   M + G   +  ++N LI
Sbjct: 295 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C++  ++ A  L     S G       YT ++ G  K  + ++ + +   ML  G  
Sbjct: 355 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 414

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            DV+ Y  L+  + +  K+ D    F VM   G+  D       L+GL     L      
Sbjct: 415 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 474

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            NKL S +  LD   +N LI+GL K G    A  L + +  +   PD  T+ +++
Sbjct: 475 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 197/448 (43%), Gaps = 12/448 (2%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV   + V+  +   G+   +  +  ++  +  E R  +    ++  M K G  PN  T 
Sbjct: 146 RVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHR-ISKAALLFTRMQKLGCTPNAITY 204

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCC------PNSRTFEIVIKGLIANSRVDDSVSI 259
             L++ L  T  I  AL   + M            P   ++ I+I  L  + R D++  +
Sbjct: 205 GTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDL 264

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM   G+   +  YT +I   C   K EEA RLF  M    + P+ +T+  LI+ LC+
Sbjct: 265 FEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCK 324

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSP 375
             ++ +A D+LE MI  G+ P    +  ++ G C VG  + +    V+     C      
Sbjct: 325 EGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVIC 384

Query: 376 HNALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +  L+   C   K   A  +   M    K  D  ++   +  L +  ++  A +L G M 
Sbjct: 385 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 444

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
           V  +  D   Y  F+ G CK     +A+ +F ++ + ++ LD   ++ L++GLC+  K+ 
Sbjct: 445 VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLE 504

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A E+F  + +        ++NI+I+  C   +V KA  L      +G +    TY  ++
Sbjct: 505 TAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 564

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDV 582
            G  + ++ + ++ +L  M+    +LDV
Sbjct: 565 RGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 167/414 (40%), Gaps = 54/414 (13%)

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L NC   N+    A      M+    TP    F  ++ GL ++  + +            
Sbjct: 67  LHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSG 126

Query: 373 TSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
            SP     N LL C CN  +      ++  +  R  I D  ++   I+ LC    I KA 
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD------SISYS 481
            L  RM      P+  TY   + G C+  N   AL++ +++   S +         ISYS
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            +++ LC+  +  EA ++F  M   G + +  S+  LI+G C   K ++A RL +   + 
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ 306

Query: 542 GTSYTTSTYTKIMLGLVKLQR---AKDLLVVLAQ-------------------------- 572
           G      T+  ++  L K  +   AKDLL V+ Q                          
Sbjct: 307 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSA 366

Query: 573 ------MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                 M  +GC  DV  Y +LI    + +K+++    +N M++ G  PD +T  +LL G
Sbjct: 367 RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG 426

Query: 627 LADGSQLHLVSSGINKLVSDSEVL----DSSMYNILINGLWKEGLTSQASYLLD 676
           L  G ++        KL    +V     D  +Y I +NGL K G   +A  L +
Sbjct: 427 LFQGGKV----GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 476



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 10/313 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF--ADFVFVYKEM 193
           SL+  F    +   A R+   M + G + +V  FNV++  + +E +     D + V   M
Sbjct: 282 SLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV---M 338

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ GIVPN+ T N L+E       + SA + F  M  KGC P+   + ++I G    S+V
Sbjct: 339 IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKV 398

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           ++++ +   M  +G + ++  Y  ++  L +  K+ +A +LF +M+   +  D   Y   
Sbjct: 399 EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIF 458

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           +N LC+N  L +A ++   +    +    + F  ++ GLC+ GK + +    E       
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYE 428
            P    +N ++   C  G+   A  + +KM       D  ++   IR   E++++ K  E
Sbjct: 519 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVE 578

Query: 429 LLGRMVVSSVVPD 441
           LL  MV   V  D
Sbjct: 579 LLHMMVQRDVSLD 591



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 7/294 (2%)

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A++    M+ S+  P  ++++  + G  K+ +Y     ++ Q+    +  D  + + L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
             LC V ++ E + V   + + G      ++  LI GLC+  ++ KA  L +     G +
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE------AYCILIQSMSEQNKL 598
               TY  +M GL +       L +  +ML +     +       +Y I+I ++ +  + 
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            +    F  M   G+ P   +  SL+HG   G +        N++V+     +   +N+L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS 711
           I+ L KEG   +A  LL++M+ +G VP+  T+  L+ G  +  +++S R  F S
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVS 372



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 6/207 (2%)

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
           T+A + F  M  +  +   SSF  L+ GL  ++   +   L +    SG S    T   +
Sbjct: 78  TQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNIL 137

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +  L  + R  + L V+A +L  G   D+  Y  LI+ +  ++++   AL F  M K G 
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM------YNILINGLWKEGL 667
            P+  T  +L+ GL     + +      ++++DS +   +       Y+I+I+ L K+  
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
             +A  L + M  +G  P   ++  L+
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLI 284



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 7/138 (5%)

Query: 141 FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           F+N    NG    AM +   + S   KL ++ FN ++  +   K G  +  + +++++ +
Sbjct: 458 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC--KAGKLETAWELFEKLPQ 515

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + P+V T N ++       ++  A   F++M K GC P+  T+  +I+G   + +++ 
Sbjct: 516 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 575

Query: 256 SVSILGEMFDLGIQLELS 273
            V +L  M    + L+++
Sbjct: 576 VVELLHMMVQRDVSLDVN 593


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 241/556 (43%), Gaps = 73/556 (13%)

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
           F    +++ A+ VL  M   G++  +   + +L      KR  +D V +  +MV+ G  P
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR-ISDAVALVDQMVEMGYKP 186

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +  T   L+  LF  N+   A+    +M ++GC P+  T+  V+ GL     +D ++++L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            +M    I+  +  +  II  LC+   +E A+ LF  M    + P+ +TY  LINCLC  
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
            R  DA+ +L +M+   + P    F                               NAL+
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTF-------------------------------NALI 335

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     GK   A+ + E+M  R I  D  ++N+ I   C +  + +A ++   MV    +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY+  + G CK    ED + +FR++S + LV ++++Y+ +++G  Q      A  V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M  N       +++IL++GLC   K+D A                            
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA---------------------------- 487

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC-ALFFNVMVKAGLVPDRE 618
                  LV+   +      L++  Y  +I+ M +  K+ +   LF ++ +K    PD  
Sbjct: 488 -------LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVV 536

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T  +++ GL     L        K+  D  + +S  YN LI    ++   + ++ L+  M
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596

Query: 679 LGKGWVPDATTHGLLV 694
              G+V DA+T  L+ 
Sbjct: 597 RSSGFVGDASTISLVT 612



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 247/559 (44%), Gaps = 24/559 (4%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V ++ +MVK+   P++   N LL  + + N+ E  +    +M   G   +  T+ I I
Sbjct: 66  DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                 S++  ++++L +M  LG + ++   + ++   C   ++ +A+ L   M  +   
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD  T+  LI+ L  + +  +A  +++ M+  G  P    +  +V GLC+ G  D ++N 
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245

Query: 365 LED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           L        K   V    N +++  C      +A  +  +M  + I  +  ++N  I  L
Sbjct: 246 LNKMEAARIKANVVI--FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C       A  LL  M+   + P+  T++A +    K     +A ++  ++  +S+  D+
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           I+Y+ L+ G C   ++ EA ++F  M    C  +  ++N LI G C  ++V+  + L   
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G    T TYT I+ G  +        +V  QM+      D+  Y IL+  +    K
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L    + F  + K+ +  +     +++ G+    +   V    +   S S   D   YN 
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK---VGEAWDLFCSLSIKPDVVTYNT 540

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-----------EIDSRR 706
           +I+GL  + L  +A  L   M   G +P++ T+  L+ +++ +           E+ S  
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600

Query: 707 FAFDSSSFPDSVSDILAEG 725
           F  D+S+    V+++L +G
Sbjct: 601 FVGDASTI-SLVTNMLHDG 618



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 230/521 (44%), Gaps = 24/521 (4%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           +R FA     Y+E+++          N L +++    +++ A+D F  M K    P+   
Sbjct: 40  ERSFASASGDYREILR----------NRLSDII----KVDDAVDLFGDMVKSRPFPSIVE 85

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F  ++  +   ++ +  +S+  +M  LGI  +L  Y+  I   CR ++L  A+ +   M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            L   PD +T   L+N  C + R+ DA  +++ M+ +G  P    F  ++ GL    K  
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPI 414
           E+V  ++        P    +  ++   C  G   LA  +L KM A R  A+   +N  I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC+   +  A +L   M    + P+  TY++ +   C    + DA R+   +  + + 
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + ++++ L++   +  K+ EA ++   M +      + ++N+LI G C+  ++D+A ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                S        TY  ++ G  K +R +D + +  +M   G   +   Y  +IQ   +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSS 653
                   + F  MV   +  D  T   LLHGL    +L   +  I K +  SE+ L+  
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD-TALVIFKYLQKSEMELNIF 504

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +YN +I G+ K G   +A    DL       PD  T+  ++
Sbjct: 505 IYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMI 542



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 34/346 (9%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+    N+ R + A R+L NM       +V  FN ++ A  +E +   +   +++EM++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK-LVEAEKLHEEMIQ 356

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             I P+  T N L+      NR++ A   F+ M  K C PN +T+  +I G     RV+D
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            V +  EM   G+      YT II    +    + A  +FK M +  +  D +TY  L++
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC   +LD A  I + +    +     ++  ++ G+C+ GK  E+ +     C     P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKP 533

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                                         D  ++N  I  LC    +++A +L  +M  
Sbjct: 534 ------------------------------DVVTYNTMISGLCSKRLLQEADDLFRKMKE 563

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
              +P+  TY+  +    + C+   +  + +++ +   V D+ + S
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 7/205 (3%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
            +++F+ +S Q+       TY  +I     AG+ +  + + + MV  R P        L+
Sbjct: 417 GVELFREMS-QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAG 197
               ++ +++ A+ +   +     +L++ ++N ++ G     K G A  +F         
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF-----CSLS 530

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           I P+V T N ++  L     ++ A D FR+M + G  PNS T+  +I+  + +     S 
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590

Query: 258 SILGEMFDLGIQLELSFYTCIIPML 282
            ++ EM   G   + S  + +  ML
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTNML 615


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 231/500 (46%), Gaps = 2/500 (0%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVDD 255
           G+ P+  + N +L VL   +    AL  +RRM H+    P + TF +  + L    R D+
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++++L  M   G   +   Y  +I  LC +  + EA  L   M  +    D  T+++++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            +C   R+ +A  +++ M+  G  P    +  +++GLC V + DE+   L          
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 313

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N ++  C   GK   A  + E M  +    D  +++I +  LC+   I  A  LL  M 
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREME 373

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+  TY+  +   CK   ++D   +  ++SA+ L L+S  Y+ ++  LC+  ++ 
Sbjct: 374 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA+ +   M   GC+    S+N +IY LC   ++++A  +       G      TY  I+
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTII 493

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
             L++  R +D + +  +M++ GC+LDV +Y  LI++M +   +    +    M + G+ 
Sbjct: 494 HALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIK 553

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P+  +   L+  L    ++        ++++     D   YN LINGL K G    A  L
Sbjct: 554 PNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNL 613

Query: 675 LDLMLGKGWVPDATTHGLLV 694
           L+ +  +   PD  T+ +L+
Sbjct: 614 LEKLHNENVHPDIITYNILI 633



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 175/340 (51%), Gaps = 6/340 (1%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           +L+V +FN V+G  + E +  A+   +Y+ M   G  P+  T + L+  L +  RI SA+
Sbjct: 308 ELNVVLFNTVIGGCLAEGK-LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              R M KKG  PN  T+ IV+     N   DD+ ++L EM   G+ L    Y  +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++ +++EA+ L + MR+    PD  +Y  +I  LC N ++++A  + E+++  G+    
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
             +  I+  L   G++ ++V   ++     C      +N L++  C  G    +  +LE+
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 399 MADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           MA++ I   + S+NI I  LC+   +R A EL  +M+   + PD  TY+  + G CK+  
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
              AL +  ++  +++  D I+Y+ L+   C+V  + +A 
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/471 (20%), Positives = 210/471 (44%), Gaps = 37/471 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R + A+ +L  M   G      ++  V+ A+ ++  G  +   +  EM+  G   +V+T 
Sbjct: 190 RADEALALLRGMARHGCVPDAVLYQTVIHALCDQG-GVTEAATLLNEMLLMGCAADVNTF 248

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++  +    R+  A     RM  KGC P   T+  +++GL    + D++ ++LG + +
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE 308

Query: 266 L-------------------------------GIQLELSFYTCIIPMLCRENKLEEAIRL 294
           L                               G Q +   Y+ ++  LC+  ++  A+RL
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 368

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            + M      P+ +TY  +++  C+N   DD   +LE+M   GLT     +  ++  LC+
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
            G+ DE++  +++      +P    +N ++   CN  +   A+ + E + +  + A+  +
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I  L  +   + A  L   M++     D  +Y+  +   CK  N + +L +  +++
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + +  +++SY+ L+  LC+  ++ +A+E+   M   G +    ++N LI GLC M  + 
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            A+ L    ++        TY  ++    K++   D  ++L + +   C +
Sbjct: 609 AALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPV 659



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 40/289 (13%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA-TYSAFVLGKCKLCNYEDALRVFRQ 467
           S+N+ +  L   +    A  L  RMV    VP    T+       C+L   ++AL + R 
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRG 200

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++    V D++ Y  ++  LC    +TEA  +   M   GC+   ++F+ ++ G+C + +
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           V +A RL     + G      TY  ++ GL ++++A +   +L ++      L+V  +  
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP----ELNVVLFNT 316

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I     + KL +    +  M   G  PD  T                            
Sbjct: 317 VIGGCLAEGKLAEATELYETMGLKGCQPDAHT---------------------------- 348

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                  Y+IL++GL K G    A  LL  M  KG+ P+  T+ +++ S
Sbjct: 349 -------YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 390


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/569 (22%), Positives = 258/569 (45%), Gaps = 11/569 (1%)

Query: 136 SLVFS-FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           S++F   ++ YR  G    A+ V +   +  F+ S+   N +LG +++  +    F  V+
Sbjct: 145 SVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNK-VELFWKVF 203

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
             M    ++P+V T   ++    +   ++ A      M +KGC PN  T+ ++I GL   
Sbjct: 204 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRA 263

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             +D+++ +   M D G+  +L  Y  +I   C E +  EA  +   M  + L P+ +TY
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+       ++ A  I ++M+  G+     ++  ++ G+C+ GK ++++  +++   
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRK 425
               P    ++ L+E  C       A  +L++M  RK+A    ++++ I  LC    ++ 
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
              +L  MV++ + P+   Y+  +    K    E++  +  ++  Q ++ D   Y+ L+ 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G C+ +++ EA      M +     ++ ++   I G     +++ A R  +   S G   
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 563

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               YT ++ G  K     +   V   +L      DV+ Y +LI  +S   K+ +    F
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + + + GL+P+  T  SL+ G      +   S  + ++       D   YNILI+GL K 
Sbjct: 624 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 683

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G   +A  L D + G+G  P+  T+  +V
Sbjct: 684 GEIERAKNLFDDIEGRGLTPNCVTYAAMV 712



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 143/606 (23%), Positives = 264/606 (43%), Gaps = 15/606 (2%)

Query: 100 CKMILKLGLAGNVEEM-----EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           C  +L   L GN  E+     +G+C + V    P+V     +++ +      V  A RVL
Sbjct: 183 CNSLLGDLLKGNKVELFWKVFDGMCAHKV---LPDVY-TYTNMISAHCKVGNVKDAKRVL 238

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           + M   G   ++  +NV++G +    R   + + + + MV  G+VP++ T + L+     
Sbjct: 239 LEMGEKGCSPNLVTYNVIIGGLCR-ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             R   A      M   G  P   T+  +I G +    ++ +  I  EM   GI+  L  
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 357

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  ++  +C+  K+E+A+ + + M    + PD  TY  LI   C    +  A ++L++M 
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
              L PT   +  I+ GLC  G    +   L +       P    +  L+      G+  
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            ++ ILE+M ++ I  D   +N  I   C+ + + +A   L  M+   + P+  TY AF+
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G  K    E A R F ++ +  ++ +   Y+ L+EG C+   +TEA  VF  +      
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 597

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++++LI+GL    K+ +A  + S     G      TY  ++ G  K         +
Sbjct: 598 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 657

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           L +M ++G   D+  Y ILI  + +  +++     F+ +   GL P+  T  +++ G   
Sbjct: 658 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 717

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                     + +++      D+ +YN+++N   KE    +A  L   ML KG+    + 
Sbjct: 718 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF 777

Query: 690 HGLLVG 695
           + L+ G
Sbjct: 778 NTLIEG 783



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 125/586 (21%), Positives = 263/586 (44%), Gaps = 40/586 (6%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F+    +  A R+   M + G + ++ ++N +L  + +  +     + + +EM++
Sbjct: 325 ALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK-MEKALEIMQEMME 383

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+  T + L+E       +  A +    M K+   P   T+ ++I GL     +  
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + +IL EM   G++     YT ++    +E ++EE+  + + MR   ++PD   Y  LI 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT 373
             C+  R+++A   L +M+   L P    +   + G  + G+ + +  +  +   CG + 
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 563

Query: 374 SP--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
           +   + AL+E  C  G    A  +   +  R++  D  ++++ I  L  N ++ +A+ + 
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             +    ++P+  TY++ + G CK  N + A ++  ++  + +  D ++Y+ L++GLC+ 
Sbjct: 624 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 683

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +I  A  +F  +   G + +  ++  ++ G C  +    A +L       G       Y
Sbjct: 684 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 743

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV------EAYCI---------LIQSMSEQ 595
             I+    K ++ +  L +  +ML +G A  V      E YC          L++ M E+
Sbjct: 744 NVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEK 803

Query: 596 NKLKDCALFFNVM---VKAGLV----------------PDRETMLSLLHGLADGSQLHLV 636
             + +   + +++    KAG++                P  +T  SLLHG  +   +  V
Sbjct: 804 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 863

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           S+   ++V+     D   Y ++I+   +EG   +A  L D +L KG
Sbjct: 864 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 909



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/547 (23%), Positives = 224/547 (40%), Gaps = 66/547 (12%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P++ + N LL  L + N++E     F  M      P+  T+  +I        V D+  +
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM + G    L  Y  II  LCR   L+EAI L + M    L+PD  TY+ LIN  C 
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
             R  +A  +L +MI +GL P    +  ++ G    G  +++    ++            
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE------------ 345

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                      +  C +E       A+   WN  +  +C+  ++ KA E++  M+   V 
Sbjct: 346 -----------MVACGIE-------ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 387

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TYS  + G C+  N   A  +  ++  + L    ++YS ++ GLC+   +     +
Sbjct: 388 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 447

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M  NG   ++  +  L+       +V+++  +       G       Y  +++G  K
Sbjct: 448 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 507

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP---- 615
            +R ++    L +ML      +   Y   I   S+  +++    +FN M+  G++P    
Sbjct: 508 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 567

Query: 616 -------------------------------DRETMLSLLHGLADGSQLHLVSSGINKLV 644
                                          D +T   L+HGL+   ++H      ++L 
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEID 703
               + ++  YN LI+G  K+G   +AS LL+ M  KG  PD  T+ +L+ G     EI+
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 687

Query: 704 SRRFAFD 710
             +  FD
Sbjct: 688 RAKNLFD 694



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/582 (20%), Positives = 245/582 (42%), Gaps = 40/582 (6%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVN 148
           +++   T  TY  +I  L   GN++    + + MV            +L+ +     RV 
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            +  +L  M   G    V  +N ++    + KR      ++  EM++  + PN  T    
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM-EMLERRLRPNAHTYGAF 536

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++   +   +E A   F  M   G  PN   +  +I+G      V ++ S+   +    +
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             ++  Y+ +I  L R  K+ EA  +F  ++   L+P+  TY  LI+  C+   +D A+ 
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP------------- 375
           +LE+M + G+ P    +  ++ GLC+ G+ + + N  +D  G   +P             
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716

Query: 376 --------------------------HNALLECCCNAGKFFLAKCILEKMADRKIADCDS 409
                                     +N +L  CC   KF  A  + ++M ++  A   S
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS 776

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I   C++ ++++A  LL  M+    +P+  TY++ +   CK     +A R++ ++ 
Sbjct: 777 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 836

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            ++++  + +Y+ L+ G   +  ++E   +F  M   G      ++ ++I   C    V 
Sbjct: 837 ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 896

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A +L+      G   + + Y  ++  L K +   ++L +L ++   G  L +    ++ 
Sbjct: 897 EACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +       + + A     MVK G V +  ++  L+ G  +G+
Sbjct: 957 RGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGA 998



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 131/589 (22%), Positives = 248/589 (42%), Gaps = 79/589 (13%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           + G   +L  M   G K +  V+  ++ A  +E R   +   + + M + GI+P+V   N
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR-VEESRMILERMREQGILPDVFCYN 499

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+    +  R+E A      M ++   PN+ T+   I G      ++ +     EM   
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+   +  YT +I   C+E  + EA  +F+ + +  ++ D  TY  LI+ L  N ++ +A
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             I  ++   GL P    +  ++ G C+ G  D++   LE+ C    +P    +N L++ 
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C AG+   AK + + +  R +  +C ++   +   C+++    A++LL  M++  V PD
Sbjct: 680 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              Y+  +   CK   +E AL +F+++  +     ++S++ L+EG C+  K+ EA  +  
Sbjct: 740 AFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLE 798

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M +     +  ++  LI   C    + +A RL           T  TYT ++ G   + 
Sbjct: 799 EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIG 858

Query: 562 RAKDLLVVLAQM-----------------------------------LVEGCALDVEAYC 586
              ++  +  +M                                   LV+G  + V AY 
Sbjct: 859 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYD 918

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD-GSQLHLVSSGINKLVS 645
            LIQ++ ++ +      FF V             L LL+ + + G +L L +        
Sbjct: 919 ALIQALCKKEE------FFEV-------------LKLLNEIGESGFRLGLPTC------- 952

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                     +++  G    G   +A+ +L  M+  GWV + T+ G LV
Sbjct: 953 ----------SVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 56/288 (19%), Positives = 108/288 (37%), Gaps = 28/288 (9%)

Query: 82   IFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE---MEGLCQNMVKERYPNVREALISLV 138
            I  +   +++F+   D + +M+ K G A  V     +EG C++   +   ++ E +I   
Sbjct: 746  ILNFCCKEEKFEKALDLFQEMLEK-GFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804

Query: 139  FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
            F   NH                    S+   N   G + E KR       ++ EM +  +
Sbjct: 805  F-IPNHVTYT----------------SLIDHNCKAGMMGEAKR-------LWLEMQERNV 840

Query: 199  VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            +P   T   LL        +      F  M  KG  P+  T+ ++I        V ++  
Sbjct: 841  MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 900

Query: 259  ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
            +  E+   G+ + ++ Y  +I  LC++ +  E ++L   +          T   +     
Sbjct: 901  LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQ 960

Query: 319  ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
                +D+A ++L  M+  G         D+V G       ++S N L+
Sbjct: 961  IAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLK 1008


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 240/521 (46%), Gaps = 14/521 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+       +++ A  +L  M   G    V V N V+  + +  R F D +  +K +  
Sbjct: 35  SLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGR-FGDALGYFKTVAG 93

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG-CCPNSRTFEIVIKGLIANSRVD 254
               P++ T N L++ L ++ R+E A   F  MH    C PN  T+  VI GL  + ++D
Sbjct: 94  TKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLD 153

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ +L  M + G    +  Y+ ++  LC+  + ++   L + M      PD + Y  L+
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCG 370
           N LC++ RLD+A ++++ MI  G  PT   +  ++   C   + D +   +    E  C 
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEI------ 423
                +N ++   C   +   A+ +L++M A R + D  +++  I  LC++  +      
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A E+L  M  +   P+  TY+  + G C+    + AL + R++    +V D  S+S +
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +  LC+   +  A ++F  MS+  C  +  ++  LI GL    +VDKA+R+  L   S  
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR 453

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
               +TY  ++ GL  + R ++ + ++  M+ + C  D  +Y  LI+ +   + +++   
Sbjct: 454 P-GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYE 512

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
            F  +   G   +      L++ L    +L       NKL+
Sbjct: 513 LFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/502 (23%), Positives = 239/502 (47%), Gaps = 16/502 (3%)

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
           +N  L +L    +   A+  FR   ++ C PN  T+  +I GL    ++D +  +L EM 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           D GI   ++ +  +I  LC+  +  +A+  FK +      PD +T+  L++ L ++ R++
Sbjct: 58  DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 325 DANDILEDMIVIGLT-PTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNAL 379
           +A  I E M       P    +  ++ GLC+ GK D ++  L    E  C      ++ L
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +E  C AG+      +L++M  R    D   +N  +  LC++  + +A EL+  M+ S  
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P   TY++ +   C+    + A R+ + +S +    D I+Y+ ++ GLC+  ++ +A  
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS------LAYSSGTSYTTSTYTK 552
           +   M    C     +++ +I GLC   +VD   +L +      +   +G      TY  
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL + ++++  L +L +M+      D+ ++ ++I S+ + + L      F +M +  
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             P+     +L+ GL+ G ++      + +L+ +S     + YN +++GL   G   +A 
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVR-VFELMVESFRPGVATYNSVLDGLCGVGRIEEAV 476

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            +++ M+ K   PD  ++G L+
Sbjct: 477 RMVEGMIHKECFPDGASYGALI 498



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 220/509 (43%), Gaps = 36/509 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM   GI P V   N +++ L +  R   AL  F+ +    C P+  TF I++  L+ + 
Sbjct: 55  EMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSG 114

Query: 252 RVDDSVSILGEMFDLGIQLE-LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           RV+++  I   M      L  +  YT +I  LC++ KL+ AI L  +M      P+ +TY
Sbjct: 115 RVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITY 174

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---- 366
             L+  LC+  R D    +L++M   G  P   ++  ++ GLC+  + DE++  ++    
Sbjct: 175 SVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
             C      +N+L+E  C + +   A  +++ M++R    D  ++N  I  LC +  +  
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  LL +MV +  VPD  TYS  + G CK            +V A               
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCK----------DWRVDADW------------- 331

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
                 K+  A E+   M + GC  ++ ++ ++I GLC  RK  +A+ L      S    
Sbjct: 332 ------KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
             S+++ ++  L K         +   M    C  +  AY  LI  +S+  ++      F
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
            +MV++   P   T  S+L GL    ++      +  ++      D + Y  LI GL + 
Sbjct: 446 ELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRV 504

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               +A  L   +  KG+  +   + +LV
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 222/496 (44%), Gaps = 58/496 (11%)

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C + +L R  +  +A++LF+  R +   P+E TY  LI+ LC+  +LD A ++L++M   
Sbjct: 3   CALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA 392
           G+ P   V   +++GLC+ G+F +++ + +   G   +P     N L++    +G+   A
Sbjct: 60  GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119

Query: 393 KCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
             I E M  + + + +  ++   I  LC++ ++ +A ELL  M  +   P+  TYS  V 
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    +    + ++++ +    D I Y+ L+ GLC+  ++ EA+E+   M ++GC  
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++N L+   C  ++VD+A RL  +    G       Y  ++ GL +  R  D   +L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQN------KLKDCALFFNVMVKAGLVPDRETMLSLL 624
            QM+   C  DV  Y  +I  + +        KL+       +M + G  P+  T   ++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 625 HGLADGSQLHLVSSGINKLVSDSEV-------------------LDSS------------ 653
            GL    +     + + +++ DSEV                   LD++            
Sbjct: 360 EGLCRARKSQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 654 -----MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGEEID 703
                 Y  LI+GL K G   +A  + +LM+ + + P   T+     GL     + E + 
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 704 SRRFAFDSSSFPDSVS 719
                     FPD  S
Sbjct: 478 MVEGMIHKECFPDGAS 493


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 155/672 (23%), Positives = 277/672 (41%), Gaps = 38/672 (5%)

Query: 57  LRHNLSPDHLIRVLDNTN--DLSSALKIFKWVSIQKRFQHTADTYCKMILKL---GLAGN 111
           L + L+PD +  V+      D       F WV+ +  F     T+  + L L   GL GN
Sbjct: 66  LPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGN 125

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSF------------------VNHYR----VNG 149
                 + + M+  R P+V+  L S++  +                  ++ YR    +N 
Sbjct: 126 AAN---VLERMIDTRNPHVK-ILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNE 181

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ V +   +  F + +   N +   +++  R    F  VYK M+ A IVP+V T   L+
Sbjct: 182 AVSVFLGAKTNEFIVGLACCNSLSKDLLKGNR-VELFWKVYKGMLGA-IVPDVYTYTNLI 239

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
                  ++E        M +KGC PN  T+ +VI GL     VD+++ +   M + G+ 
Sbjct: 240 NAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLL 299

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            +   Y  +I   CR+ +  E   +   M  + L PD + Y  LIN   +   +  A  +
Sbjct: 300 PDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQV 359

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
            E+M    +      +  ++ GLC++G  +++ +   +       P    +N L+E    
Sbjct: 360 KEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYK 419

Query: 386 AGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                 A + ++E   +   A+       +  LC   ++ +A EL   M+   + P+   
Sbjct: 420 VQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVI 479

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  V G  K   +E+A+++   +  Q L  D   Y+ ++ G C+  K+ E       M 
Sbjct: 480 YTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G   +  ++   I+G C   ++  A R       SG +      T ++ G  K     
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTT 599

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
                   ML +G   DV+ + +LI  +S+  KL++    F+ ++  GLVPD  T  SL+
Sbjct: 600 KAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLI 659

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
             L     L       + +       +   YN LINGL K G  ++A  L D +  KG  
Sbjct: 660 SNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLA 719

Query: 685 PDATTHGLLVGS 696
            ++ T+  ++  
Sbjct: 720 RNSVTYSTIIAG 731



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 162/682 (23%), Positives = 281/682 (41%), Gaps = 93/682 (13%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERY-----PNVREALISLVFSFVNHYRVNGAM 151
           D Y    L  G        EG  ++M+ E Y     P+   A  +L+  FV    + GA 
Sbjct: 301 DNYIYATLIDGFCRQKRSTEG--KSMLDEMYTMGLKPD-HVAYTALINGFVKQSDIGGAF 357

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           +V   M +   KL+   +  ++  +  + +     D   ++ EM   GI P++ T N L+
Sbjct: 358 QVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAED---LFSEMTMMGIKPDIQTYNCLI 414

Query: 210 EVLFETNRIESALDQ-----------------------------------FRRMHKKGCC 234
           E  ++   +E A +                                    F+ M   G  
Sbjct: 415 EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLK 474

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN   +  ++KGL+   R ++++ ILG M D G+  ++  Y  +I   C+  K+EE    
Sbjct: 475 PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSY 534

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M A  L P+  TY   I+  C    +  A     +M+  G+ P D +  D++ G C+
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594

Query: 355 VGKFDESVNFLEDKC----GYV--TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADC 407
            G   ++  F + +C    G +     H+ L+      GK   A  +  ++ D+  + D 
Sbjct: 595 DGNTTKA--FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDV 652

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   I  LC+  +++ A+EL   M    + P+  TY+A + G CKL     A  +F  
Sbjct: 653 FTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDG 712

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  + L  +S++YS ++ G C+   +TEA ++F  M   G    S  +  LI G C    
Sbjct: 713 IPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGN 772

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
            +KA+ L       G + +T  +  ++ G  KL +  +   ++  M+      +   Y I
Sbjct: 773 TEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTI 831

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG---LADGSQL-----HLVSSG 639
           LI+       +K+    F  M K  ++P+  T  SLLHG   +   S++      +V+ G
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891

Query: 640 IN-----------------------KLVSD--SEVLD--SSMYNILINGLWKEGLTSQAS 672
           I                        KLV D  SE ++   ++Y ILI+ L K    S+  
Sbjct: 892 IKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVL 951

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            +LD +  +G      T G LV
Sbjct: 952 KVLDEVEKQGSKLSLATCGTLV 973



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/546 (21%), Positives = 240/546 (43%), Gaps = 17/546 (3%)

Query: 136  SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFV 189
            +++  F    ++      LV M + G K +V  +   +      G +   +R F      
Sbjct: 517  TVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFI----- 571

Query: 190  YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
              EM+ +GI PN      L++   +      A  +FR M  +G  P+ +T  ++I GL  
Sbjct: 572  --EMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629

Query: 250  NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            N ++ +++ +  E+ D G+  ++  YT +I  LC+E  L+ A  L   M    + P+ +T
Sbjct: 630  NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689

Query: 310  YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
            Y  LIN LC+   +  A ++ + +   GL      +  I+ G C+     E+        
Sbjct: 690  YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK 749

Query: 370  GYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRK 425
                 P +    AL++ CC AG    A  +   M +  IA   ++N  I    +  ++ +
Sbjct: 750  LVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIE 809

Query: 426  AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            AY+L+  MV + + P+  TY+  +   C + N ++A ++F ++  ++++ + ++Y+ L+ 
Sbjct: 810  AYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLH 869

Query: 486  GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            G  ++ + +E   +F  M   G      ++++++          KA++L     S G + 
Sbjct: 870  GYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNV 929

Query: 546  TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              + YT ++  L K     ++L VL ++  +G  L +     L+       +  +     
Sbjct: 930  CKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVL 989

Query: 606  NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
              MV++ L     ++ +   G ++G  L ++  G   L  D + LD  ++  L +    +
Sbjct: 990  ESMVRSFLNLLEFSVRNGNRGKSNGEMLSIILEGRKSLSGDIQTLDVDLFKELSSSTSNQ 1049

Query: 666  GLTSQA 671
            G  + A
Sbjct: 1050 GKNASA 1055



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 115/269 (42%)

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           + ++ ++VPD  TY+  +   C++   E+   V   +  +  + + ++YS ++ GLC+  
Sbjct: 222 KGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAG 281

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EA+E+   M+  G    +  +  LI G C  ++  +   +    Y+ G       YT
Sbjct: 282 DVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYT 341

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G VK         V  +M      L+   Y  LI  + +   L+     F+ M   
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+ PD +T   L+ G      +      + ++  ++   ++ M   ++NGL   G  ++A
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           + L   M+  G  P+   +  +V   V E
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKE 490


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 224/479 (46%), Gaps = 7/479 (1%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++++M + G+ P+V T N L+  L +  R   A   F  M KKG  P+S  +  ++ G
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 +     +L  M   G Q +   +  +I    +   ++EA+  F  MR   L P+
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPN 380

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC   ++DDA    + +I  GLTP   VF  ++ GLC   K+D++     
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCEN 420
           +  G    P+    N LL   C  G    AK I + M  R    CD  ++   I   C +
Sbjct: 441 EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMV-RVDVQCDVITYTTLIDGYCLD 499

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            ++ +A +LL  MV+  V P+  TY+  + G CK    EDA  +FRQ++++ +    + Y
Sbjct: 500 GKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIY 559

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           S ++ GL Q  +I  A E++  M K G  L   ++NI++ GLC     D A+R+      
Sbjct: 560 STILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCL 619

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                   T+  ++  L+K  R  +   + A +L  G   +V  Y ++++S+ EQ  L++
Sbjct: 620 IDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEE 679

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
               F  + K G   D   + +L+  L    ++      ++K+  ++  L++S    L+
Sbjct: 680 LDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 124/545 (22%), Positives = 227/545 (41%), Gaps = 9/545 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+      F+ +L  +  +KR         + M   G  PN  + N LL+ L + NR + 
Sbjct: 126 GWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQ 185

Query: 221 ALDQFRRM----HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           AL     M     + GC P+  ++  VI GL+   ++D +  +  EM D G+      Y 
Sbjct: 186 ALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYN 245

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C++   C   K +EAI +F+ M    + PD +TY  L+  LC+N R  +A  + + M+  
Sbjct: 246 CLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKK 305

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P   ++  ++ G    G   +    L+      T P     N L+      G    A
Sbjct: 306 GHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEA 365

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                KM  + +  +  ++   +  LC   ++  A     R++   + P+   +   + G
Sbjct: 366 MLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHG 425

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C    ++ A  +  ++  + +  ++I ++ L+  LC+   +T A  +F  M +      
Sbjct: 426 LCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCD 485

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++  LI G C+  KVD+A +L       G      TY  I+ G  K  R +D   +  
Sbjct: 486 VITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFR 545

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           QM  +G    +  Y  ++  + +  ++      +  M+K G+     T   +L GL   +
Sbjct: 546 QMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNN 605

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
                    + L      L +  +NI+I+ L K G   +A  L   +L +G VP+  T+ 
Sbjct: 606 CTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 665

Query: 692 LLVGS 696
           L++ S
Sbjct: 666 LMMKS 670



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 203/440 (46%), Gaps = 8/440 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +++ L   G   E   +  +MVK+ +        +L+  +     +    ++L  M
Sbjct: 278 TYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVM 337

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
              G +    +FN+++GA    K G  D  +  + +M + G+ PN+ T   +++ L    
Sbjct: 338 VRNGTQPDHYIFNILIGAYA--KHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+ QF R+  +G  PN   F  +I GL A  + D +  +  EM   GI     F+ 
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC+E  +  A  +F +M  +D+  D +TY  LI+  C + ++D+A  +LE M++ 
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G+ P +  +  I+ G C+ G+ +++ +          +P    ++ +L       +   A
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           K +   M    I     ++NI ++ LC+N     A  +   + +        T++  +  
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K   +++A  +F  + A+ LV + ++Y  +++ L +   + E  ++F  + KNGC+  
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAD 695

Query: 512 SSSFNILIYGLCVMRKVDKA 531
           S   N L+  L    +V KA
Sbjct: 696 SRMLNALVGKLPQKGEVRKA 715



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/430 (21%), Positives = 182/430 (42%), Gaps = 35/430 (8%)

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +S ++   +F+   + +L  Y+ +I    R   L+ A      +         +T+  L+
Sbjct: 79  ESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLL 138

Query: 315 NCLCENLRLDDANDI-LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
             LC + R  DA DI L  M  +G TP    +  +++GLC+  +  ++++ L        
Sbjct: 139 KGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLH------- 191

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYEL 429
                                    MAD     C     S+   I  L    ++ KAY L
Sbjct: 192 -----------------------TMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCL 228

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              M+   + P+C TY+  + G C     ++A+ +FR++    +  D ++Y+ L+  LC+
Sbjct: 229 FDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCK 288

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             +  EA +VF  M K G    SS +  L++G      + +  +L  +   +GT      
Sbjct: 289 NGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYI 348

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           +  ++    K     + ++  ++M  +G   ++  Y  ++ ++    K+ D    F+ ++
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             GL P+     +L+HGL    +         +++      ++  +N L+N L KEG+ +
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468

Query: 670 QASYLLDLML 679
           +A  + DLM+
Sbjct: 469 RAKNIFDLMV 478



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/476 (22%), Positives = 193/476 (40%), Gaps = 33/476 (6%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL  F RM +   C    T+ IVI        +D + + LG +   G   +   ++ ++ 
Sbjct: 84  ALSLFNRMPRADLC----TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139

Query: 281 MLCRENKLEEAIRL-FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
            LC + +  +A+ +  + M AL   P+  +Y  L+  LC+  R   A  +L  M+     
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMA---- 195

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
                  D  RG C             D   Y T  +  L E     G+   A C+ ++M
Sbjct: 196 -------DDTRGGCP-----------PDVVSYTTVINGLLRE-----GQLDKAYCLFDEM 232

Query: 400 ADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
            D+ ++ +C ++N  +   C + + ++A  +  +M    V PD  TY+  ++  CK    
Sbjct: 233 LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRS 292

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +A +VF  +  +    DS  Y  L+ G      + +  ++   M +NG       FNIL
Sbjct: 293 MEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNIL 352

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I        VD+A+   S     G      TY  +M  L ++ +  D +    +++ EG 
Sbjct: 353 IGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGL 412

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             +   +  LI  +   +K          M+  G+ P+     +LL+ L     +    +
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKN 472

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             + +V      D   Y  LI+G   +G   +A+ LL+ M+  G  P+  T+  ++
Sbjct: 473 IFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTII 528


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 240/521 (46%), Gaps = 14/521 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+       +++ A  +L  M   G    V V N V+  + +  R F D +  +K +  
Sbjct: 35  SLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGR-FGDALGYFKTVAG 93

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG-CCPNSRTFEIVIKGLIANSRVD 254
               P++ T N L++ L ++ R+E A   F  MH    C PN  T+  VI GL  + ++D
Sbjct: 94  TKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLD 153

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ +L  M + G    +  Y+ ++  LC+  + ++   L + M      PD + Y  L+
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCG 370
           N LC++ RLD+A ++++ MI  G  PT   +  ++   C   + D +   +    E  C 
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEI------ 423
                +N ++   C   +   A+ +L++M A R + D  +++  I  LC++  +      
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A E+L  M  +   P+  TY+  + G C+    + AL + R++    +V D  S+S +
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +  LC+   +  A ++F  MS+  C  +  ++  LI GL    +VDKA+R+  L   S  
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR 453

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
               +TY  ++ GL  + R ++ + ++  M+ + C  D  +Y  LI+ +   + +++   
Sbjct: 454 P-GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYE 512

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
            F  +   G   +      L++ L    +L       NKL+
Sbjct: 513 LFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/502 (23%), Positives = 239/502 (47%), Gaps = 16/502 (3%)

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
           +N  L +L    +   A+  FR   ++ C PN  T+  +I GL    ++D +  +L EM 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           D GI   ++ +  +I  LC+  +  +A+  FK +      PD +T+  L++ L ++ R++
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 325 DANDILEDMIVIGLT-PTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNAL 379
           +A  I E M       P    +  ++ GLC+ GK D ++  L    E  C      ++ L
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +E  C AG+      +L++M  R    D   +N  +  LC++  + +A EL+  M+ S  
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P   TY++ +   C+    + A R+ + +S +    D I+Y+ ++ GLC+  ++ +A  
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS------LAYSSGTSYTTSTYTK 552
           +   M    C     +++ +I GLC   +VD   +L +      +   +G      TY  
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL + ++++  L +L +M+      D+ ++ ++I S+ + + L      F +M +  
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             P+     +L+ GL+ G ++      + +L+ +S     + YN +++GL   G   +A 
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVR-VFELMVESFRPGVATYNSVLDGLCGVGRIEEAV 476

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            +++ M+ K   PD  ++G L+
Sbjct: 477 RMVEGMIHKECFPDGASYGALI 498



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 219/509 (43%), Gaps = 36/509 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM   GI P V   N ++  L +  R   AL  F+ +    C P+  TF I++  L+ + 
Sbjct: 55  EMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSG 114

Query: 252 RVDDSVSILGEMFDLGIQLE-LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           RV+++  I   M      L  +  YT +I  LC++ KL+ AI L  +M      P+ +TY
Sbjct: 115 RVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITY 174

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---- 366
             L+  LC+  R D    +L++M   G  P   ++  ++ GLC+  + DE++  ++    
Sbjct: 175 SVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
             C      +N+L+E  C + +   A  +++ M++R    D  ++N  I  LC +  +  
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  LL +MV +  VPD  TYS  + G CK            +V A               
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCK----------DWRVDADW------------- 331

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
                 K+  A E+   M + GC  ++ ++ ++I GLC  RK  +A+ L      S    
Sbjct: 332 ------KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
             S+++ ++  L K         +   M    C  +  AY  LI  +S+  ++      F
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
            +MV++   P   T  S+L GL    ++      +  ++      D + Y  LI GL + 
Sbjct: 446 ELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRV 504

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               +A  L   +  KG+  +   + +LV
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 222/496 (44%), Gaps = 58/496 (11%)

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C + +L R  +  +A++LF+  R +   P+E TY  LI+ LC+  +LD A ++L++M   
Sbjct: 3   CALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA 392
           G+ P   V   ++RGLC+ G+F +++ + +   G   +P     N L++    +G+   A
Sbjct: 60  GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119

Query: 393 KCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
             I E M  + + + +  ++   I  LC++ ++ +A ELL  M  +   P+  TYS  V 
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    +    + ++++ +    D I Y+ L+ GLC+  ++ EA+E+   M ++GC  
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++N L+   C  ++VD+A RL  +    G       Y  ++ GL +  R  D   +L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQN------KLKDCALFFNVMVKAGLVPDRETMLSLL 624
            QM+   C  DV  Y  +I  + +        KL+       +M + G  P+  T   ++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 625 HGLADGSQLHLVSSGINKLVSDSEV-------------------LDSS------------ 653
            GL    +     + + +++ DSEV                   LD++            
Sbjct: 360 EGLCRARKSQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 654 -----MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGEEID 703
                 Y  LI+GL K G   +A  + +LM+ + + P   T+     GL     + E + 
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 704 SRRFAFDSSSFPDSVS 719
                     FPD  S
Sbjct: 478 MVEGMIHKECFPDGAS 493


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 153/620 (24%), Positives = 269/620 (43%), Gaps = 27/620 (4%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE- 132
            D  SALK FK    +  F+H A++YC +   L            C     +    ++E 
Sbjct: 106 GDPKSALKFFKEAGARAGFRHAAESYCVLAHIL-----------FCGMFYLDARSVIKEW 154

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG-AIVEEKRGFADFVFVYK 191
            L+   F   + + +  + R   N+   GF +   +FNV++   ++EE R        + 
Sbjct: 155 ILLGREFPGCDFFDMLWSTR---NVCRPGFGVFDTLFNVLVDLGMLEEARQ------CFW 205

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M K  ++P V + N LL  L ++++   AL  F+ M   G  P+  T+ +VI  L    
Sbjct: 206 KMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREG 265

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            ++ + S+  EM   G++ ++  Y  +I    +   L  A+ +F+ M+     PD +TY 
Sbjct: 266 DLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYN 325

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LINC C+  R+  A + L  M   GL P    +  ++   C+ G   E+  F  D    
Sbjct: 326 SLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV 385

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
              P    + +L++  C  G    A  +  +M    +  +  ++   +  LCE+  +R+A
Sbjct: 386 GLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREA 445

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            EL G ++ +    +   Y++   G  K    E A+ +  +++ ++L  D + Y   + G
Sbjct: 446 EELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWG 505

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+  +I +++ V   M   G + +S  +  LI     + K  +A+ L       G   T
Sbjct: 506 LCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKIT 565

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ GL K+   +  +     M   G   ++  Y  LI  + + + L++    FN
Sbjct: 566 VVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFN 625

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M+  G+ PD+    SL+ G           S  N++V     LD   Y  LI G  + G
Sbjct: 626 EMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYG 685

Query: 667 LTSQASYLLDLMLGKGWVPD 686
               A  LLD ML KG +PD
Sbjct: 686 QVQLAKSLLDEMLRKGIIPD 705



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/467 (20%), Positives = 196/467 (41%), Gaps = 5/467 (1%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C P    F+ +   L+    ++++     +M    +  ++     ++  L + +K   A+
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
             FK M    L P   TY  +I CL     L+ A  + E+M   GL P    +  ++ G 
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 353 CEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
            +VG    +V+  E+       P    +N+L+ C C   +   A   L  M  R +  + 
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            +++  I   C+   + +A +    M+   + P+  TY++ +   CK+ +  +A ++  +
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +    + L+ ++Y+ L++GLC+  ++ EA E+F  + K G +L+   +  L +G    + 
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           ++KA+ +               Y   + GL +    +D + V+ +M+  G   +   Y  
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI +  +  K  +       M   G+     T   L+ GL     +       + +  + 
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +  +Y  LI+GL K     +A  L + ML KG  PD   +  L+
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 246/536 (45%), Gaps = 34/536 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +I + K+ +     +  +M   GI P+V TLN L+      NR+  A     ++
Sbjct: 72  FNRLLTSIAKTKQ-YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKI 130

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I+GL    ++ D++ +  +M   G Q  +  Y  +I  LC+    
Sbjct: 131 LKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 190

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  PD + Y  +I+ LC++ ++ +A ++   M+  G++P  D+F   
Sbjct: 191 NAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP--DIFT-- 246

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                      + +L+   CN  ++     +L +M + KI  D 
Sbjct: 247 ---------------------------YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDV 279

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
             ++  +  LC+  +I +A++++  M++  V P+  TY+A + G C     ++A++VF  
Sbjct: 280 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 339

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +       + ISY+ L+ G C+++++ +A  +F  M +     ++ ++N L++  C + +
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGR 398

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  AI L     + G     +TY  ++  L K     + + +L  +       D++ Y I
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 458

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I  M    +L+     F+ +   GL P+  T   +++GL     L   +    ++  + 
Sbjct: 459 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 518

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
              D   YN +  GL +     +A  LL  ML +G+  D +T  LLV     +++D
Sbjct: 519 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLD 574



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 226/514 (43%), Gaps = 17/514 (3%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ AL  F RM      P++  F  ++  +    +     S+  +M   GI  ++   
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C  N+L  A  +   +  L   PD  T+  LI  LC   ++ DA  + + MI 
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFL 391
            G  P    +  ++ GLC+VG  + ++  L    +  C      + ++++  C   +   
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  KM  + I+ D  ++   I  LC   E +    LL +M+ S ++PD   +S  V 
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 287

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK     +A  V   +  + +  + ++Y+ L++G C   ++ EAV+VF  M  NG + 
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 347

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  S+N LI G C ++++DKA  L            T TY  +M     + R +D + + 
Sbjct: 348 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALF 406

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+  G   D+  Y IL+  + +++ L +       +  + + PD +    ++ G+   
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L       + L S     +   Y I+INGL + GL  +A+ L   M G G  PD  T+
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 526

Query: 691 -----GLLVGS------SVGEEIDSRRFAFDSSS 713
                GLL          + +E+ +R F+ D S+
Sbjct: 527 NTITQGLLQNKEALRAIQLLQEMLARGFSADVST 560



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 15/215 (6%)

Query: 116 EGLCQNMVKERYPNVREALISLVFSFVNHY----RVNGAMRVLVNMNSGGFKLSVDVFNV 171
           E +CQ   KE  PN      ++ ++ + H     R+  A+ +   M + G    +  + +
Sbjct: 373 EEMCQ---KELIPN------TVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRI 423

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           +L  + + K    + + + K +  + + P++     +++ +     +E+A D F  +  K
Sbjct: 424 LLDYLCK-KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 482

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  PN RT+ I+I GL     +D++  +  EM   G   +   Y  I   L +  +   A
Sbjct: 483 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 542

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           I+L + M A     D  T   L+  LC++ +LD +
Sbjct: 543 IQLLQEMLARGFSADVSTTTLLVEMLCDD-KLDQS 576


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 225/473 (47%), Gaps = 10/473 (2%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS-IQKRFQHTADTYCKMILKLGLAGNV 112
           I+     L P  L+ ++    +L  AL+IF++    Q  F H  DTY  +I KL  A   
Sbjct: 52  IKPWPQRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVF 111

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
             +E L  ++ K +        I+++ ++    + + A+R  + +     + SV   N +
Sbjct: 112 GPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTL 171

Query: 173 LGAIVEEKRGFADFVF-VYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           L A V+ KR   D V  ++K    K G++PNV T N L++ L + N +ESA+     M  
Sbjct: 172 LNAFVQNKR--YDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPA 229

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            G  PN  T+  ++ G  +   + ++  + GE+FD G   + + YT ++   C + +L +
Sbjct: 230 MGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLAD 289

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           AI+L   M    + P+E+TY  ++   C+  +  +A ++L+DM+     P+  +   ++ 
Sbjct: 290 AIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVID 349

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKIAD 406
            LCE GK +E+    +        P NA    L+   C  GK + A+ +  +     I  
Sbjct: 350 VLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPS 409

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I  +CE  E+ +A +L   M+     P+  TY+  + G  K+ N ++ +R+  
Sbjct: 410 LLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILE 469

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           ++     + +  +Y+ L+E LC++    E V+    M+     + S S+++ +
Sbjct: 470 EMLDNRCMPNKSTYAILIEELCKMGMEGE-VDKVVSMAMASGGVDSDSWDLFL 521



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/425 (18%), Positives = 189/425 (44%), Gaps = 9/425 (2%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRAL--DLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           ++ M+ R+  L+ A+++F+       +   +  TY+ +I+ L           +L D+  
Sbjct: 64  LVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHK 123

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
             +   +++F++++R     GK D +    +   +          N LL       ++ L
Sbjct: 124 SQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDL 183

Query: 392 AKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
              + +    +   + +  + NI I+ LC+  ++  A ++L  M    ++P+  TY+  +
Sbjct: 184 VHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTIL 243

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G     +  +A +VF ++  +  + D+ +Y+ L+ G C+  ++ +A+++   M +NG  
Sbjct: 244 GGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVE 303

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            +  ++ +++   C  +K  +A  L           +++   K++  L +  + ++   +
Sbjct: 304 PNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACEL 363

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             +ML + C  D      LI  + ++ K+ +    F    + G +P   T  +L+ G+ +
Sbjct: 364 WKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFER-GAIPSLLTYNTLIAGMCE 422

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             +L       + ++      ++  YN+LI G  K G   +   +L+ ML    +P+ +T
Sbjct: 423 KGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKST 482

Query: 690 HGLLV 694
           + +L+
Sbjct: 483 YAILI 487


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 156/718 (21%), Positives = 304/718 (42%), Gaps = 88/718 (12%)

Query: 35  LSSETDMIKSHQT----TDYEAKIQSLRHNLSPDHLIRVLDNT-NDLSSALKIFKWVSIQ 89
           LSS TD + + +       Y   + S+   ++P+    +L  T ND +  LK   +    
Sbjct: 15  LSSPTDALLAEKALTLLKRYPYHLNSISSQITPELASYLLLQTQNDRTLTLKFINFAKPH 74

Query: 90  KRFQHTADTYCK-----MILKLGLAGNVEEM-EGLCQNMVKERYP-------------NV 130
           + F    + +CK     ++ K  L    + + + L +N V E+               N 
Sbjct: 75  QFF----NPHCKCIALHILTKFKLYKTAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNS 130

Query: 131 REALISLVF---SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
             A+  LV    S++N   +  A+ ++      GF   V  +N +L +IV  ++      
Sbjct: 131 SSAVFDLVVKSCSYLNF--IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAE 188

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            VY+EM+ +G+  NV + N L+        +E  L  F  M +  C PN  T        
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVT-------- 240

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
                                      Y  +I   C+  +++EA +L + M    L P+ 
Sbjct: 241 ---------------------------YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNL 273

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           LTY  +IN LC   R+++ + +L +M   G  P    +  +V G C+VG F +++    +
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                  P    + +L+   C AG    A    ++M  R +  +  ++   I    +   
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +AY +   M+ S   P   TY+A + G C     E+A+ + R +  + L  D +SYS 
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++ G C+ +++  A ++   M + G S  + +++ LI GLC  R++++A  L     +  
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TYT ++ G  K     + L +  +M+ +G   D   Y +LI  +++Q + ++  
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 603 -----LFFNVMVKAGLVPDR----------ETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
                LF++  +  G+  D           +++++L+ G      ++        ++  +
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           +  + ++YN++I+G  ++G   +A  L   M+  G++P   T   LV +   E +D +
Sbjct: 634 QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQ 691



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 216/510 (42%), Gaps = 64/510 (12%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V  +N V+GA  + KR    F  + + M   G+ PN+ T N ++  L    RIE     
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLL-RSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M +KG  P+  T+  ++ G         ++ +  EM   G+  ++  YT +I  +C+
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              L  A+  F  M    L P+ +TY  LIN   +   +D+A  I ++MI  G  PT   
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           +  ++ G C  G+ +E++  L    G   SP    ++ ++   C   +   A  +  +M 
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475

Query: 401 DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           ++ ++ D  +++  I+ LCE   + +A +L   M+  S++PD  TY++ + G CK  +  
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGL-------------------------------- 487
           +AL +  ++  +  + D+++Y+ L+ GL                                
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI 595

Query: 488 ------------------CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                             C    + EA +VF  M K     + + +N++I+G C    V 
Sbjct: 596 ESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVH 655

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL---LVVLAQMLVEGCAL-DVEAY 585
           KA +L    Y     +    +T  ++ LVK   ++ +   L ++ + ++  C L D E  
Sbjct: 656 KAHKL----YKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELS 711

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
             L+Q   ++  +         M K G +P
Sbjct: 712 KALVQINHKEGNIDAVFNLLTEMAKDGFLP 741



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 2/288 (0%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+ S V  +  +Y+  + G C   N E  LR F ++     + + ++Y+ ++   C++++
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I EA ++   M   G   +  ++N++I GLC + ++++   + +     G +    TY  
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K+      LV+ ++ML  G   DV  Y  LI +M +   L     FF+ M   G
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L P+  T  SL++G +    +       ++++          YN L+NG    G   +A 
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433

Query: 673 YLLDLMLGKGWVPDATTHG-LLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            LL  M GKG  PD  ++  ++ G    +E+D R F  ++      VS
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELD-RAFQMNAEMVEKGVS 480


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/577 (22%), Positives = 246/577 (42%), Gaps = 18/577 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+   +    V  AM V V M +        V+  ++  + E  R     V + + M  
Sbjct: 147 ALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSN 206

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PN+   N L++       +E AL  F  M    C PN RT+  +I GL  + +V+ 
Sbjct: 207 -GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +   M + G++  +  YT +I   C E  L+ A RL  +M    L+P++ T+  LI+
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVT 373
            LC+  ++++A   L  ++  G+   + V+  ++ GLC+ GK D +   ++     G+V 
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385

Query: 374 SPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
             H  ++L++  C   K   A  +LE M ++ I A   ++ I I  L          ++ 
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M+ + + PD  TY+ FV   C+    EDA  +  Q+  + +  + ++Y+ L+ G   +
Sbjct: 446 DKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA------------ 538
             +++A   F  M   G   +  S+ +L+  +      D ++ +  +A            
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDI 565

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
                      Y+  +  L ++ R ++       M         + Y  +I        L
Sbjct: 566 TERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKIL 625

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            D     + M K+G +P  E+   ++  L +G            L+      D  ++ IL
Sbjct: 626 TDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKIL 685

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           I GL ++G  ++ S LL +M   G+ P  T + ++ G
Sbjct: 686 IYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITG 722



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 224/510 (43%), Gaps = 9/510 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           ++ +  +  +P +  LN LL  L              RM  +    N RT+  +I     
Sbjct: 29  HRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCL 84

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  +   L  +   G+  +   YT  +   CR   L  A R+F +M     +    T
Sbjct: 85  AGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFT 144

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++ L     + +A  +   M      P   V+  +V GLCE G+ +E+   LE+  
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIR 424
                P    +NAL++  CNAG+   A  + E M  +R   +  ++   I  LC++ ++ 
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  L  RMV + + P+  TY+A + G+C   + + A R+   +    LV +  ++S L+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           + LC+ EK+ EA      + K G  ++   +  LI GLC   K+D A  L     S G  
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               +Y+ ++ GL + ++     ++L  M+ +G       Y I+I  +  +   +     
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ M+  G+ PD  T    +    +  ++    S I ++V      +   YN LI G   
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            GL SQA    ++M+GKGW P+  ++ +L+
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 180/450 (40%), Gaps = 14/450 (3%)

Query: 293 RLFKMMRAL-DLMPDE--LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           R+F  M +L   MP     TY  LIN  C    +  A   L  ++  GL P    +   V
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114

Query: 350 RGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKI 404
            G C  G    +           C      + ALL     AG    A  +   M AD   
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCA 174

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D   +   +  LCE     +A  LL   + +   P+   Y+A + G C     E AL+V
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +       +  +Y++L+ GLC+  K+  A+ +F  M + G   +  ++  LI G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              +  A RL  L  ++G      T++ ++  L K ++ ++  + L  ++ +G  ++   
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  LI  + +  K+         M+  G VPD  +  SL+ GL    +L   +  +  ++
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEI 702
                     Y I+I+ L +E  +     + D M+  G  PD  T+ + V S    G   
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 703 DSRRF---AFDSSSFPDSVS-DILAEGLGN 728
           D+        D   FP+ V+ + L  G  N
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 247/565 (43%), Gaps = 44/565 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMV 194
           ++V   V   R+  A+RV   M   G K+ V V   ++ G  + ++ G A  + ++KE +
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA--LNLFKETL 324

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K GIVP       L+    +    + A +  R+M  +G  P++    +V+KGL+ + R  
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D+V +  EM D G+  ++  Y  +I   C+ +KL EA+ LF  M+   + P   TY  L+
Sbjct: 385 DAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
              C+   +D+A  +  +M + G  P    ++ ++RG      FD               
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDN-------------- 489

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRM 433
                            A  +L++M    ++  D ++N+ I  +C  + + +   +L   
Sbjct: 490 -----------------AYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSF 532

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           +    +P   TY++ + G  K      A  V++Q+  + L  + I+Y+  ++G C+    
Sbjct: 533 MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS 592

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A+++   + + G      ++N LI G C    +  A++L  +    G +  T  Y  +
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G   L   K++      M+  G   D   Y  LI   S+   +      ++ M+  G 
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS----MYNILINGLWKEGLTS 669
           +PD  T  +L HGL     +     G  KL+ +   LD      +YN+LING  ++    
Sbjct: 713 IPDAFTFTALTHGLCRSGDI----DGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           +A  L D ML  G  PD TT+ +LV
Sbjct: 769 EAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/583 (22%), Positives = 242/583 (41%), Gaps = 79/583 (13%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            Y  MV  G+VP++ +   LL      +  + AL  F  M  +G   ++  F+ ++   +
Sbjct: 144 TYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACL 203

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                +D+V +  EM    I  +   Y   I  LC+      A+R+ + M+ +     + 
Sbjct: 204 KEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDF 263

Query: 309 TYEELINCLCENLRLDDA---NDILED----MIVI------------------------- 336
           TY  +++ L +  R+++A   ND + D    M VI                         
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323

Query: 337 ---GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
              G+ PT  ++  ++RG  +VG   ++        G    P     + +L+   N  ++
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A C+ E+MAD  + D  ++N  I W C+  ++R+A  L  RM  + V P   TY++ +
Sbjct: 384 KDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
           +G CK    ++A++++ ++  +    + ++Y  L+ G    +    A  +   M +NG S
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVS 503

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            +  ++N+LI G+C++ +V +   +     S G   T  TY  I+ G VK         V
Sbjct: 504 CNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTV 563

Query: 570 LAQMLVEGCA-----------------------------------LDVEAYCILIQSMSE 594
             QM  +G                                      D+ AY  LI    +
Sbjct: 564 YQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQ 623

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           +  +        +++K GL P+     SL+ G  + + +  VS     ++    V D+S 
Sbjct: 624 EGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTST 683

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGL 692
           Y  LI+G  K+G  + A  L   M+ KG++PD     A THGL
Sbjct: 684 YTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/487 (21%), Positives = 207/487 (42%), Gaps = 20/487 (4%)

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           +A D +  M  +G  P+ ++   ++      S   D++++  EM   G +++   +  ++
Sbjct: 140 AATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALM 199

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
               +E   E+A+RLF  M   ++ PD+  Y   I  LC+      A  +L +M  +G  
Sbjct: 200 SACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFD 259

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCC------NAG 387
             D  +  +V  L + G+ +E++   ++      K   + +    L+   C      NA 
Sbjct: 260 TCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVA--TTLMRGYCLRQEVGNAL 317

Query: 388 KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             F      E + D  +     + + IR   +    +KAYEL  +M    ++P     S 
Sbjct: 318 NLF-----KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSL 372

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G      ++DA+ +F ++ A S + D  +Y+ L+   CQ  K+ EA+ +F  M K G
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEM-ADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG 431

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              S +++N L+ G C    +D+A++L S     G      TY  +M G +  +   +  
Sbjct: 432 VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAY 491

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L +M   G + +   Y +LI  +   +++ +        +  G +P   T  S+++G 
Sbjct: 492 ALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGF 551

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                +    +   ++       +   Y   I+G  + G +  A  +L+ +  +G  PD 
Sbjct: 552 VKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDI 611

Query: 688 TTHGLLV 694
             +  L+
Sbjct: 612 VAYNALI 618



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/395 (21%), Positives = 167/395 (42%), Gaps = 9/395 (2%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           ++LI      + L  AL +F  +  +   + + +TY  +++     G ++E   L   M 
Sbjct: 405 NNLIHWHCQAHKLREALNLFDRMK-KAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMP 463

Query: 124 KERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
            E + PNV    I+L+  ++     + A  +L  M   G   +   +NV++  I    R 
Sbjct: 464 MEGFKPNV-VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR- 521

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
             +   + K  +  G +P + T N ++    +   + SA   +++M +KG  PN  T+  
Sbjct: 522 VCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTS 581

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            I G       D ++ +L ++   G+Q ++  Y  +I   C+E  +  A++L  ++    
Sbjct: 582 FIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L P+ + Y  LI        + + +   E MI  G+      +  ++ G  + G    ++
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701

Query: 363 NFLEDKC--GYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
               +    GY+       AL    C +G    AK +LE+M    +  +   +N+ I   
Sbjct: 702 ELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             + ++++A+ L   M+   + PD  TY   V  K
Sbjct: 762 LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKK 796



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 13/203 (6%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA-----IVEEKRGFADFV 187
           A  +L+  F     ++ A+++LV +   G   +  V+N ++       +++E   F    
Sbjct: 613 AYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKF---- 668

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
             Y+ M+K GIV +  T   L++   +   +  AL+ +  M  KG  P++ TF  +  GL
Sbjct: 669 --YESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
             +  +D +  +L EM  L ++  +  Y  +I    R+ KL+EA RL   M  + + PD+
Sbjct: 727 CRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDD 786

Query: 308 LTYEELINCLCENLRLDDANDIL 330
            TY+ L++   + L  D+  D+L
Sbjct: 787 TTYDILVS--KKFLEADNCADVL 807



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 17/241 (7%)

Query: 140 SFVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SF++ Y   G    A+++L ++   G +  +  +N ++    +E    +  + +   ++K
Sbjct: 581 SFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN-MSHALQLLVILLK 639

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PN    N L+      N ++     +  M K G   ++ T+  +I G   +  V  
Sbjct: 640 DGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAF 699

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +  EM   G   +   +T +   LCR   ++ A +L + MR LD+ P+   Y  LIN
Sbjct: 700 ALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLIN 759

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-DKCGYVTS 374
               + +L +A  + ++M+ +G+ P DD   DI+           S  FLE D C  V +
Sbjct: 760 GYLRDCKLQEAFRLHDEMLNMGIQP-DDTTYDIL----------VSKKFLEADNCADVLN 808

Query: 375 P 375
           P
Sbjct: 809 P 809


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/506 (22%), Positives = 242/506 (47%), Gaps = 17/506 (3%)

Query: 126 RYPNVREALISLVFSFVNHYR-------VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE 178
           ++PN +  + + ++S ++H+        V+   R+L N+N       +  F  +LG++V+
Sbjct: 13  QFPNPKFIISTSLYSQLHHHHQDDEHSLVSSFNRIL-NINP---TPPIFEFGKILGSLVK 68

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
               +   + +++EM   GI  ++ T N L+    +      +   F  + KKG  PN+ 
Sbjct: 69  -INCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAI 127

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T   +IKGL    ++  ++    ++  LG  L    Y  +I  LC+  +   A++L + +
Sbjct: 128 TLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRV 187

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               + P+ + Y  +I+ +C+   +++A D+  +M+  G++P    +  ++ G C +GK 
Sbjct: 188 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKL 247

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
           ++++           +P     + L++  C  G+   AK +L  M  + I  D  ++   
Sbjct: 248 NDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSL 307

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +   C  +++ KA  +   M    V  +  +Y+  + G CK+   ++A+ +F+++  +++
Sbjct: 308 MDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           + D ++Y+ L++GLC+  KI+ A+++   M   G      ++N ++  LC   +VDKAI 
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L +     G      TYT ++ GL K  R KD   +   +LV+G  + V  Y ++IQ   
Sbjct: 428 LLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC 487

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRET 619
           + +         + M   G +P+ +T
Sbjct: 488 DNDLFDKALALLSKMEDNGCIPNAKT 513



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 209/464 (45%), Gaps = 8/464 (1%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M   G    +  FN+++      + G   F F V+  ++K G  PN  TL  L++ L   
Sbjct: 82  MEFNGIASDLVTFNILINCF--SQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLK 139

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +I  AL    ++   G   N   +  +I GL    +   ++ +L  +    +Q  +  Y
Sbjct: 140 GQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 199

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             II  +C+   + EA  L+  M +  + PD +TY  LI+  C   +L+DA  +   MI 
Sbjct: 200 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
             + P    F  +V G C+ G+  E+ N L         P    + +L++  C   +   
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNK 319

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           AK I   MA   + A+  S+NI I   C+ +++ +A  L   M   +++PD  TY++ + 
Sbjct: 320 AKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID 379

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK      AL++  ++  + +  D I+Y+ +++ LC+  ++ +A+ +   M   G   
Sbjct: 380 GLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 439

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              ++ ILI GLC   ++  A  +       G + T  TYT ++ G          L +L
Sbjct: 440 DMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALL 499

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
           ++M   GC  + + Y I+I S+ E+++          M+  GL+
Sbjct: 500 SKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 197/423 (46%), Gaps = 7/423 (1%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           I+  L + N  + AI L + M    +  D +T+  LINC  +      +  +  +++  G
Sbjct: 62  ILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC---GYVTSP--HNALLECCCNAGKFFLA 392
             P       +++GLC  G+  ++++F  DK    G+  +   +  L+   C  G+   A
Sbjct: 122 YEPNAITLTTLIKGLCLKGQIHQALHF-HDKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L ++  + +  +   +N  I  +C+ + + +A++L   MV   + PD  TYSA + G
Sbjct: 181 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISG 240

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C L    DA+ +F ++ ++ +  D  ++S LV+G C+  ++ EA  V   M K G    
Sbjct: 241 FCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD 300

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++  L+ G C++++V+KA  + +     G +    +Y  ++ G  K+++  + + +  
Sbjct: 301 VVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFK 360

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M  +    DV  Y  LI  + +  K+       + M   G+  D+ T  S+L  L    
Sbjct: 361 EMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNH 420

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           Q+    + + K+  +    D   Y ILI+GL K G    A  + + +L KG+     T+ 
Sbjct: 421 QVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYT 480

Query: 692 LLV 694
           +++
Sbjct: 481 VMI 483



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 5/270 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    + G + +  GL   M+ E   P+V    I LV  F    RV  A  VL  
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI-LVDGFCKEGRVKEAKNVLAM 291

Query: 157 MNSGGFKLSVDVF-NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M   G K  V  + +++ G  + ++   A  +F    M + G+  NV + N ++    + 
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF--NTMAQGGVTANVQSYNIMINGFCKI 349

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +++ A++ F+ MH K   P+  T+  +I GL  + ++  ++ ++ EM D G+  +   Y
Sbjct: 350 KKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITY 409

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             I+  LC+ +++++AI L   M+   + PD  TY  LI+ LC+  RL DA +I ED++V
Sbjct: 410 NSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLV 469

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
            G   T   +  +++G C+   FD+++  L
Sbjct: 470 KGYNITVYTYTVMIQGFCDNDLFDKALALL 499



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%)

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           + KI+  LVK+   +  + +  +M   G A D+  + ILI   S+          F  ++
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G  P+  T+ +L+ GL    Q+H      +K+V+    L+   Y  LINGL K G TS
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTS 178

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS 696
            A  LL  + GK   P+   +  ++ S
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDS 205


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 152/636 (23%), Positives = 269/636 (42%), Gaps = 50/636 (7%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +++ L + +D++ AL+ FK ++  K F+HT  TY  MI KL     ++ ++ L Q M  E
Sbjct: 46  VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE 105

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                 +  IS++ S+        A++    M                           D
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQ--------------------------D 139

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F           + P V   N++L+ L + NR +     +  M K G  PN  T+ I++K
Sbjct: 140 F----------RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L  N+RVD +  +L EM   G   +   YT +I  LC+  K++EA  L     A+   P
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTP 244

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
               Y  LIN +C+    ++A  +L++M+  G+ P    +  I+  L + G  + S+  L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA--DRKI-----ADCDSWNIPIRWLC 418
                   SP+            FFL     E +   DR I      +  ++N  +  LC
Sbjct: 305 AKMFARGCSPNLHTFTSLIKG--FFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLC 362

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
               +  A  +  +M ++   P+  TYSA + G  K  + + A  V+  +       + +
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ +V+ LC+     +A  +   M    C  ++ +FN  I GLC   +VD AI++    
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            +SG    T+TY +++  L+K +R  +   ++  M   G  L++  Y  +I        L
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            +       MV  G  PD  T+  ++       ++++    +++L +     D   Y  L
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           I+G+       +A   L  ML +G  P+  T  +LV
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 163/374 (43%), Gaps = 33/374 (8%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           ++ VL  M + G   ++  F  ++      K G  + +  +  M++ G+VPNV   N L+
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFL-KGGSHEALDFWDRMIREGVVPNVVAYNALM 358

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L     +  A+  F +M   GCCPN RT+  +I G      +D +  +   M   G  
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCH 418

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  YTC++ +LCR +   +A  L + M+  +  P+ +T+   I  LC + R+D A  +
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
            + M   G  P    + +++  L +  +F E+   ++D                      
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD---------------------- 516

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
                    M  R I  +  ++N  I   C    + +A ELLG+MVV    PD  T +  
Sbjct: 517 ---------MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   CK      A+++  ++SA     D I+Y+ L+ G+C    + EA+     M   G 
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627

Query: 509 SLSSSSFNILIYGL 522
           S + +++N+L+  L
Sbjct: 628 SPNVATWNVLVRHL 641



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 142/330 (43%), Gaps = 13/330 (3%)

Query: 44  SHQTTDYEAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADT 98
           SH+  D+  ++  +R  + P+      L+  L +   L  A+ +F  + I     +   T
Sbjct: 332 SHEALDFWDRM--IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR-T 388

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  +I     AG+++    +   M+    +PNV  A   +V     +   N A  ++ NM
Sbjct: 389 YSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV-AYTCMVDVLCRNSMFNQAYCLIENM 447

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETN 216
                  +   FN  +  +    R   D+   V+ +M  +G  PN  T N LL+ L +  
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGR--VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R   A    + M  +G   N  T+  +I G      + +++ +LG+M   G + +     
Sbjct: 506 RFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVN 565

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C++ K+  AI+L   + A    PD + Y  LI+ +C ++ +++A   L  M+  
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           G++P    +  +VR L        +V FL+
Sbjct: 626 GISPNVATWNVLVRHLFSNMGHSGAVQFLD 655



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 6/237 (2%)

Query: 461 ALRVFRQVS-AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           AL  F+ ++ ++S     ++Y  ++E L    ++     +   M   G S S   F  +I
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
                    ++A++            T   Y  I+  L+   R + +  + + M  +G  
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +V  Y IL++++ + N++         M   G  PD  +  +L+  L    ++      
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             + ++ S      +YN LING+ KE    +A  LLD M+ KG  P+  ++  ++ +
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 5/187 (2%)

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
            +S+A S    +T  TY  ++  L   +    +  +L QM +EG +   + +  +I S  
Sbjct: 63  FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYR 122

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
                +     F  M    + P  +    +L  L D ++  +++   + +  D    +  
Sbjct: 123 RAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVF 182

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDS 711
            YNIL+  L K      A  LL  M  KG  PD  ++  L+ S   +G+  ++R  A   
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAM-- 240

Query: 712 SSFPDSV 718
            SF  SV
Sbjct: 241 -SFTPSV 246


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 145/605 (23%), Positives = 260/605 (42%), Gaps = 49/605 (8%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G +E+ + L   M+        +A  SL+  +     V     +LV M      +S   +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420

Query: 170 NVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
             V+  +     G  D  + + KEM+ +G  PNV     L++   + +R   A+   + M
Sbjct: 421 GTVVKGMCSS--GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            ++G  P+   +  +I GL    R+D++ S L EM + G++     Y   I      ++ 
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A +  K MR   ++P+++    LIN  C+  ++ +A      M+  G+      +  +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + GL +  K D++     +  G   +P    +  L+      G    A  I ++M +  +
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 405 A-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +   +N+ +   C + EI KA ELL  M V  + P+  TY   + G CK  +  +A R
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  + LV DS  Y+ LV+G C++  +  A+ +F   +K GC+ S++ FN LI  + 
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVF 777

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG-LVKLQRAKDLLVVLAQMLVEGCALDV 582
              K               T   T    ++M G   +  +  D+                
Sbjct: 778 KFGK---------------TELKTEVLNRLMDGSFDRFGKPNDV---------------- 806

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y I+I  + ++  L+     F+ M  A L+P   T  SLL+G     +   +    ++
Sbjct: 807 -TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD------ATTHGLLVG- 695
            ++     D  MY+++IN   KEG+T++A  L+D M  K  V D      +T   LL G 
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925

Query: 696 SSVGE 700
           + VGE
Sbjct: 926 AKVGE 930



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 220/509 (43%), Gaps = 40/509 (7%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + M+  G+VP   T + L++ L +  R+E A      M   G   ++ T+ ++I GL+  
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              D +  ++ EM   GI ++   Y C I ++ +E  +E+A  LF  M A  L+P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI   C    +    ++L +M    +  +   +  +V+G+C  G  D + N +++   
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P    +  L++      +F  A  +L++M ++ IA D   +N  I  L + + + +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A   L  MV + + P+  TY AF+ G  +   +  A +  +++    ++ + +  + L+ 
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+ EK+ EA   +  M   G           I G                        
Sbjct: 566 EYCKKEKVIEACSAYRSMVDQG-----------ILG------------------------ 590

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TYT +M GL K  +  D   +  +M  +G A DV +Y +LI   S+   ++  +  F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + MV+ GL P+      LL G     ++      ++++       ++  Y  +I+G  K 
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G  ++A  L D M  KG VPD+  +  LV
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 33/402 (8%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y+ MV  GI+ +  T   L+  LF+ ++++ A + FR M  KG  P+  ++ ++I G   
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  + SI  EM + G+   +  Y  ++   CR  ++E+A  L   M    L P+ +T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---E 366
           Y  +I+  C++  L +A  + ++M + GL P   V+  +V G C +   + ++      +
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-----ADCDSWNIPIRWLCENE 421
             C   T+P NAL+      GK  L   +L ++ D         +  ++NI I +LC+  
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A EL  +M  ++++P   TY++ + G  K+    +   VF +  A  +  D I YS
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 482 KLVEGLCQVEKITEA-VEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++    +    T+A V V    +KN    GC LS S+   L+ G   + +++ A     
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA----- 934

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
                          K+M  +V+LQ   D   V+ +++ E C
Sbjct: 935 --------------EKVMENMVRLQYIPDSATVI-ELINESC 961



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 104/512 (20%), Positives = 183/512 (35%), Gaps = 149/512 (29%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +EEA+ +F     L+L+P     + L++ L    RLD                   +F D
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD-------------------LFWD 207

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           + +G+            +E    +    ++ L+   C AG   L K +L K         
Sbjct: 208 VYKGM------------VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE----- 250

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
                   +      +  A +L   M+   +VP   TY   + G CK+   EDA  +  +
Sbjct: 251 --------FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302

Query: 468 VSAQSLVLDSISYSKLVEGLCQV-----------EKITEAVEV--------FCCMSKNGC 508
           + +  + LD+ +YS L++GL +            E ++  + +         C MSK G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 509 S----------------LSSSSFNILIYGLCVMRKVDKAIRL------RSL--------- 537
                              + ++  LI G C  + V +   L      R++         
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 538 -------------AY-------SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
                        AY       +SG       YT ++   ++  R  D + VL +M  +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH--- 634
            A D+  Y  LI  +S+  ++ +   F   MV+ GL P+  T  + + G  + S+     
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 635 ----------------LVSSGINKLVSDSEVL----------------DSSMYNILINGL 662
                           L +  IN+     +V+                D+  Y +L+NGL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +K      A  +   M GKG  PD  ++G+L+
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 247/562 (43%), Gaps = 72/562 (12%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++GA  ++  M + G + +V ++  ++   ++  R F D + V KEM + GI P++   N
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR-FGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L +  R++ A      M + G  PN+ T+   I G I  S    +   + EM + 
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+       T +I   C++ K+ EA   ++ M    ++ D  TY  L+N L +N ++DDA
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
            +I  +M   G+ P    +  ++ G  ++G   ++ +  ++      +P+  +       
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII------- 664

Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
                                  +N+ +   C + EI KA ELL  M V  + P+  TY 
Sbjct: 665 -----------------------YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             + G CK  +  +A R+F ++  + LV DS  Y+ LV+G C++  +  A+ +F   +K 
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKK 760

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG-LVKLQRAKD 565
           GC+ S++ FN LI  +    K               T   T    ++M G   +  +  D
Sbjct: 761 GCASSTAPFNALINWVFKFGK---------------TELKTEVLNRLMDGSFDRFGKPND 805

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           +                  Y I+I  + ++  L+     F+ M  A L+P   T  SLL+
Sbjct: 806 V-----------------TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           G     +   +    ++ ++     D  MY+++IN   KEG+T++A  L+D M  K  V 
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908

Query: 686 D------ATTHGLLVG-SSVGE 700
           D      +T   LL G + VGE
Sbjct: 909 DGCKLSISTCRALLSGFAKVGE 930



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 219/509 (43%), Gaps = 40/509 (7%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + M+  G+VP   T + L++ L +  R+E A      M   G   ++ T+ ++I GL+  
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              D +  ++ EM   GI ++   Y C I ++ +E  +E+A  LF  M A  L+P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI   C    +    ++L +M    +  +   +  +V+G+C  G  D + N +++   
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P    +  L++      +F  A  +L++M ++ IA D   +N  I  L + + + +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A   L  MV + + P+  TY AF+ G  +   +  A +  +++    ++ + +  + L+ 
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  K+ EA   +  M   G           I G                        
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQG-----------ILG------------------------ 590

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TYT +M GL K  +  D   +  +M  +G A DV +Y +LI   S+   ++  +  F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + MV+ GL P+      LL G     ++      ++++       ++  Y  +I+G  K 
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G  ++A  L D M  KG VPD+  +  LV
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/641 (20%), Positives = 267/641 (41%), Gaps = 63/641 (9%)

Query: 56  SLRHNLSPDHLIRVL--DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           +L   ++P+ ++ VL     +D S  L  F WV  QK  +   D++  + L L   G+ E
Sbjct: 55  NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFE 114

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
           +   + + M++  +P V E   S+V             +  V  +  G    +     + 
Sbjct: 115 KALSVVERMIERNWP-VAEVWSSIV----------RCSQEFVGKSDDGVLFGILFDGYIA 163

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
              +EE       VFV+   +   +VP +     LL+ L   NR++   D ++ M ++  
Sbjct: 164 KEYIEEA------VFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
             + +T+ ++I   IA+ R  +    LG+  D+  + E  F T  +        ++ A++
Sbjct: 218 VFDVKTYHMLI---IAHCRAGNVQ--LGK--DVLFKTEKEFRTATL-------NVDGALK 263

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L + M    L+P + TY+ LI+ LC+  RL+DA  +L +M  +G++  +  +  ++ GL 
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
           +    D +   + +   +  +    + +CC          C++ K               
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCI---------CVMSKEG------------- 361

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
                    + KA  L   M+ S ++P    Y++ + G C+  N      +  ++  +++
Sbjct: 362 --------VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           V+   +Y  +V+G+C    +  A  +   M  +GC  +   +  LI       +   A+R
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +       G +     Y  +++GL K +R  +    L +M+  G   +   Y   I    
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           E ++      +   M + G++P++     L++      ++    S    +V    + D+ 
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            Y +L+NGL+K      A  +   M GKG  PD  ++G+L+
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/541 (20%), Positives = 230/541 (42%), Gaps = 10/541 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  M+ +G++P       L+E       +    +    M K+    +  T+  V+KG+ 
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           ++  +D + +I+ EM   G +  +  YT +I    + ++  +A+R+ K M+   + PD  
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
            Y  LI  L +  R+D+A   L +M+  GL P    +   + G  E  +F  +  ++++ 
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 368 -KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
            +CG + +      L+   C  GK   A      M D+ I  D  ++ + +  L +N+++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A E+   M    + PD  +Y   + G  KL N + A  +F ++  + L  + I Y+ L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + G C+  +I +A E+   MS  G   ++ ++  +I G C    + +A RL       G 
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
              +  YT ++ G  +L   +  + +      +GCA     +  LI  + +  K +    
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 604 FFNVMVKAGL----VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
             N ++         P+  T   ++  L     L       +++ + + +     Y  L+
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           NG  K G  ++   + D  +  G  PD   + +++ + + E + ++        F  +  
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 720 D 720
           D
Sbjct: 908 D 908



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 33/402 (8%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y+ MV  GI+ +  T   L+  LF+ ++++ A + FR M  KG  P+  ++ ++I G   
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  + SI  EM + G+   +  Y  ++   CR  ++E+A  L   M    L P+ +T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---E 366
           Y  +I+  C++  L +A  + ++M + GL P   V+  +V G C +   + ++      +
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-----ADCDSWNIPIRWLCENE 421
             C   T+P NAL+      GK  L   +L ++ D         +  ++NI I +LC+  
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A EL  +M  ++++P   TY++ + G  K+    +   VF +  A  +  D I YS
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 482 KLVEGLCQVEKITEA-VEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++    +    T+A V V    +KN    GC LS S+   L+ G   + +++ A     
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA----- 934

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
                          K+M  +V+LQ   D   V+ +++ E C
Sbjct: 935 --------------EKVMENMVRLQYIPDSATVI-ELINESC 961


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 229/469 (48%), Gaps = 12/469 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++ +      ++ AM VL  M   G   +   +N +L      ++      F+ K+M  
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL-KKMRS 294

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+V T N L++ L +  R   A   F  M K+G  P+  T+  +++G      + +
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             ++L  M   GI  +   +  +I    ++ K++EA+ +F  MR   L P+ +TY  +I 
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGY 371
            LC++  +DDA    E MI  GLTP   V+  ++  LC   K+D++    +  L+     
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
            T   N+++   C  G+   ++ + + M    +  +  +++  I   C   ++ +A +LL
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    + PDC TY+  + G C++   +DAL +F+++ +  +  + I+Y+ +++GL   
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +   A E++  ++K+G  L  S++NI+++GLC     D+A+R+      +     T T+
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 551 TKIMLGLVKLQR---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
             ++  L+K+ R   AKDL   L+     G   DV  Y ++ +++ EQ 
Sbjct: 655 NIMIGALLKVGRNDEAKDLFAALS---ANGLVPDVRTYSLMAENLIEQG 700



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/592 (22%), Positives = 245/592 (41%), Gaps = 43/592 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M +   +P+V + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
             LL+ L + NR + AL+    M      G  P+  ++  VI G       D + S   E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D  I  ++  Y+ II  LC+   +++A+ +   M    +MP+ +TY  +++  C + +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA---- 378
             +A   L+ M   G+ P    +  ++  LC+ G+  E+    +        P  A    
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           LL+     G       +L+ M    I  D   +NI I    + E++ +A  +  +M    
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+  TY A +   CK  + +DA+  F Q+  + L  + I Y+ L+  LC  +K  +A 
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461

Query: 498 EVFCCMSKNGCSLSSSSFNILIY-----------------------------------GL 522
           E+   M   G  L++  FN +I+                                   G 
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C+  K+D+A +L S  +S G      TY  ++ G  ++ R  D L +  +M+  G + ++
Sbjct: 522 CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNI 581

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y I++Q +    +       +  + K+G   +  T   +LHGL   +           
Sbjct: 582 ITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L      L++  +NI+I  L K G   +A  L   +   G VPD  T+ L+ 
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 693



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/518 (22%), Positives = 231/518 (44%), Gaps = 40/518 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V++E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     P   T+ 
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G ++E   +T ++  LC + +  +A+ +  + M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMI---VIGLTPTDDVFVDIVRGLCEVGK 357
           L  MPD  +   L+  LC+  R  +A ++L  M      G  P    +  ++ G  + G 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRW 416
            D+                               A     +M DR+I+ D  +++  I  
Sbjct: 212 SDK-------------------------------AYSTYHEMLDRRISPDVVTYSSIIAA 240

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+ + + KA E+L  MV + V+P+C TY++ + G C     ++A+   +++ +  +  D
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++Y+ L++ LC+  + TEA ++F  M+K G     +++  L+ G      + +   L  
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           L   +G       +  ++    K ++  + ++V ++M   G   +V  Y  +I  + +  
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            + D  L+F  M+  GL P+     SL+H L    +       I +++     L++  +N
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I+   KEG   ++  L DLM+  G  P+  T+  L+
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 127/565 (22%), Positives = 233/565 (41%), Gaps = 51/565 (9%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKR---GFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           +    +G    +V  + +++G      R   GFA        +VK G      T   LL+
Sbjct: 75  MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAAL----GNVVKKGFRVEAITFTPLLK 130

Query: 211 VLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD---L 266
            L    R   A+D   RRM +  C P+  +  I++KGL   +R  +++ +L  M D    
Sbjct: 131 GLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGG 190

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G   ++  YT +I    +E   ++A   +  M    + PD +TY  +I  LC+   +D A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
            ++L  M+  G+ P    +  I+ G C   +  E++ FL+        P    +N+L++ 
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+   A+ I + M  R +  D  ++   ++       + + + LL  MV + + PD
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              ++  +    K    ++A+ VF ++    L  + ++Y  ++  LC+   + +A+  F 
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKA-----------IRLRSLAYSS--------- 541
            M   G + +   +  LI+ LC+  K DKA           I L ++ ++S         
Sbjct: 431 QMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG 490

Query: 542 ---------------GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
                          G      TY+ ++ G     +  +   +L+ M   G   D   Y 
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            LI      +++ D    F  MV +G+ P+  T   +L GL    +          +   
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610

Query: 647 SEVLDSSMYNILINGLWKEGLTSQA 671
              L+ S YNI+++GL K  LT +A
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEA 635



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/460 (21%), Positives = 207/460 (45%), Gaps = 42/460 (9%)

Query: 77  SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS 136
           + A KIF  ++ ++  +    TYC ++      G + EM  L   MV+            
Sbjct: 318 TEARKIFDSMT-KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN----------- 365

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
                                   G      VFN+++ A  ++++   + + V+ +M + 
Sbjct: 366 ------------------------GIHPDHHVFNILICAYAKQEK-VDEAMLVFSKMRQH 400

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ PNV T   ++ +L ++  ++ A+  F +M  +G  PN   +  +I  L    + D +
Sbjct: 401 GLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKA 460

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             ++ EM D GI L   F+  II   C+E ++ E+ +LF +M  + + P+ +TY  LI+ 
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDG 520

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
            C   ++D+A  +L  M  +G+ P    +  ++ G C V + D+++   ++      SP 
Sbjct: 521 YCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPN 580

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
              +N +L+   +  +   AK +   +       +  ++NI +  LC+N    +A  +  
Sbjct: 581 IITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 640

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            + ++ +  +  T++  +    K+   ++A  +F  +SA  LV D  +YS + E L +  
Sbjct: 641 NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            + E  ++F  M +NGC+ +S   N ++  L     + +A
Sbjct: 701 LLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/383 (21%), Positives = 162/383 (42%), Gaps = 11/383 (2%)

Query: 324 DDANDILEDMIVIGLTPT----DDVFVDIVR--GLCEVGKFDESVNFLEDKCGYVTSPHN 377
           +DA  + E+++  G   +    +    D+ R      V +++        K       + 
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL-LGRMVV 435
            L+ CCC AG+  L    L  +  +    +  ++   ++ LC ++    A ++ L RM  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS---AQSLVLDSISYSKLVEGLCQVEK 492
            S +PD  + +  + G C     ++AL +   ++         D +SY+ ++ G  +   
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
             +A   +  M     S    +++ +I  LC  + +DKA+ + +    +G      TY  
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           I+ G    ++ K+ +  L +M  +G   DV  Y  L+  + +  +  +    F+ M K G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L PD  T  +LL G A    L  + + ++ +V +    D  ++NILI    K+    +A 
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 673 YLLDLMLGKGWVPDATTHGLLVG 695
            +   M   G  P+  T+G ++G
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIG 414


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 219/483 (45%), Gaps = 41/483 (8%)

Query: 253 VDDSVSILGEMFDLGIQLELSF-YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           VDD+VS    +  +   ++  F +  I+  L + N    AI   K M    + PD  T+ 
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---K 368
            LINC C    L+ A  +L  +  +G  P       +++GLC  GK  E+++F +D   K
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163

Query: 369 CGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
             ++    +  L+   C  G+   A  +L K+    +  +   +N  I  LC+++ +  A
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHA 223

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +L   M+V  + PD  TY+  + G   +   ++A+ +F Q+  +++  D  +++ LV+G
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283

Query: 487 LCQ-----------------------------------VEKITEAVEVFCCMSKNGCSLS 511
           LC+                                   V++  +A  VF  M++ G +  
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 343

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             S++I+I GLC  + VD+A+ L    +S   +  T TY  ++ GL+K  R  D   ++ 
Sbjct: 344 VQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVN 403

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   G   DV  Y  L+ ++ + +++         +   G+ P+  T   L+ GL    
Sbjct: 404 EMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNG 463

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +L    +    L+     LD  MYN+++NGL KEGL  +A  L+  M   G +PDA T+ 
Sbjct: 464 RLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYE 523

Query: 692 LLV 694
            LV
Sbjct: 524 TLV 526



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 223/469 (47%), Gaps = 6/469 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V+    F   +   K+M    I P++ T N L+        +  A     ++
Sbjct: 67  FNKILSSLVKLNH-FHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKI 125

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ T   +IKGL  N +V +++    ++   G  L+   Y  +I  LC+  + 
Sbjct: 126 FKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGET 185

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A+++ + +  L + P+ + Y  +I+ LC++  +  A+D+  +MIV  + P    +  +
Sbjct: 186 RAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTL 245

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G   VG+  E+V            P     N L++  C  G+   A+ +L  M  + +
Sbjct: 246 IYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGV 305

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
            ++  ++N  +      ++  KA  +   M    V PD  +YS  + G CK    ++A+ 
Sbjct: 306 DSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVN 365

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F+++ ++S+  ++++Y+ L++GL +  +I++A ++   M   G      +++ L+  LC
Sbjct: 366 LFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALC 425

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              +VDKAI L +     G      TYT ++ GL K  R KD   V   +L++G  LDV+
Sbjct: 426 KNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVK 485

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            Y +++  + ++    +     + M   G +PD  T  +L+  L +  +
Sbjct: 486 MYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDK 534



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 168/353 (47%), Gaps = 37/353 (10%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYR 146
           I KR      TY  +I    + G ++E  GL   M+ K   P+V    I LV        
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNI-LVDGLCKEGE 289

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +  A  VL  M   G   ++  +N ++ G  + ++   A FVF    M + G+ P+V + 
Sbjct: 290 MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVF--NTMARRGVTPDVQSY 347

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++  L +T  ++ A++ F+ MH K   PN+ T+  +I GL+   R+ D+  ++ EM +
Sbjct: 348 SIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN 407

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G   ++  Y+ ++  LC+ +++++AI L   ++   + P+  TY  L++ LC+N RL D
Sbjct: 408 RGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKD 467

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A  + +D+++ G      ++  +V GLC+ G FDE+++                      
Sbjct: 468 AQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS---------------------- 505

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                    ++ KM D   I D  ++   +R L EN++  KA +LL  M+V  
Sbjct: 506 ---------LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 174/363 (47%), Gaps = 5/363 (1%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + PNV   N +++ L +   +  A D    M  K   P+  T+  +I G +   R+ ++V
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +  +M    I+ ++  +  ++  LC+E ++++A  +  +M    +  + +TY  L++  
Sbjct: 260 GLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
               + + A  +   M   G+TP    +  ++ GLC+    DE+VN  ++      +P  
Sbjct: 320 FLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT 379

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N+L++     G+   A  ++ +M +R + AD  +++  +  LC+N ++ KA  L+ +
Sbjct: 380 VTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITK 439

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +    + P+  TY+  V G CK    +DA  V++ +  +   LD   Y+ +V GLC+   
Sbjct: 440 IKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGL 499

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
             EA+ +   M  NGC   + ++  L+  L    K DKA++L       G++  ++  + 
Sbjct: 500 FDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSN 559

Query: 553 IML 555
            ML
Sbjct: 560 SML 562


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 223/499 (44%), Gaps = 33/499 (6%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +K+M+ AG  P V T N +++ +++   IE+A   F  M  +G  P++ T+  +I G   
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             R+DD+V    EM  +  + ++  Y  +I   C+  KL + +  ++ M+   L P+ ++
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++  C+   +  A     DM  +G  P +  +  +V   C++G   ++        
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDA-------- 292

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
                              F LA  +LE   +  +    ++   I  LC+ E +++A +L
Sbjct: 293 -------------------FRLANEMLEVGVEWNVV---TYTALIDGLCDAERMKEAEKL 330

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
            G+MV + V+P+ A+Y+A + G  K  N + AL +  ++  + +  D + Y   + GLC 
Sbjct: 331 FGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCG 390

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           +EKI  A  V   M +NG   ++  +  L+          + + L           T  T
Sbjct: 391 LEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT 450

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVE-GCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +  ++ GL K +     +    +M  + G   +   Y  +I  + ++N++K     F  M
Sbjct: 451 FCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM 510

Query: 609 VKAGLVPDRETMLSLLHG-LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
            + GLVPDR    SL+ G L  G+ L  ++   +K+      LD   Y  L+ G  +   
Sbjct: 511 AQEGLVPDRTAYTSLMDGNLKQGNMLEALAL-RDKMAEIGMKLDLLAYTSLVWGFSQCNQ 569

Query: 668 TSQASYLLDLMLGKGWVPD 686
             +A   L+ M+G+  +PD
Sbjct: 570 LQKARSFLEEMIGEEILPD 588



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/549 (21%), Positives = 234/549 (42%), Gaps = 44/549 (8%)

Query: 110 GNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G +EE       M + R +P  R +   L+  F    + +G  R   +M   G K +V  
Sbjct: 77  GMLEEATQCFSKMKRFRVFPKTR-SCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFT 135

Query: 169 FNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           +N+++  +     +E  RG      +++EM   G++P+  T N +++   +  R++  + 
Sbjct: 136 YNIMIDCMWKEGDIEAARG------LFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVY 189

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F  M    C P+  T+  +I     + ++   +    EM   G++  +  Y+ ++   C
Sbjct: 190 FFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFC 249

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +E+ +++AI+ +  MR +  +P+E TY  L++  C+   L DA  +  +M+ +G+     
Sbjct: 250 KEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVV 309

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
            +  ++ GLC+  +  E+                         GK   A           
Sbjct: 310 TYTALIDGLCDAERMKEAEKLF---------------------GKMVTAGV--------- 339

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           I +  S+N  I    + + + +A ELL  +    + PD   Y  F+ G C L   E A  
Sbjct: 340 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKV 399

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           V  ++    +  +++ Y+ L++   +    TE + +   M +    ++  +F +LI GLC
Sbjct: 400 VMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC 459

Query: 524 VMRKVDKAI-RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
             + V KAI     ++   G     + YT ++ GL K  + K    +  QM  EG   D 
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            AY  L+    +Q  + +     + M + G+  D     SL+ G +  +QL    S + +
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEE 579

Query: 643 LVSDSEVLD 651
           ++ +  + D
Sbjct: 580 MIGEEILPD 588



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 206/472 (43%), Gaps = 14/472 (2%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C P    F+ +   LI    ++++     +M    +  +      ++    +  K +   
Sbjct: 59  CVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 118

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           R FK M      P   TY  +I+C+ +   ++ A  + E+M   GL P    +  ++ G 
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 353 CEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
            +VG+ D++V F E+       P    +N+L+ C C +GK         +M    +  + 
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV 238

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S++  +   C+ + +++A +    M     VP+  TY++ V   CK+ N  DA R+  +
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +    +  + ++Y+ L++GLC  E++ EA ++F  M   G   + +S+N LI+G    + 
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D+A+ L +     G       Y   + GL  L++ +   VV+ +M   G   +   Y  
Sbjct: 359 MDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTT 418

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG-SQLHLVSSGINKLVSD 646
           L+ +  +     +       M +     D E  +     L DG  +  LVS  I+     
Sbjct: 419 LMDAYFKSGNPTEGLHLLEEMQEL----DHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRM 474

Query: 647 SEVL----DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           S       ++++Y  +I+GL KE     A+ L + M  +G VPD T +  L+
Sbjct: 475 SNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLM 526



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 119/275 (43%), Gaps = 1/275 (0%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+ +   P   TY+  +    K  + E A  +F ++  + L+ D+++Y+ +++G  +V +
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + + V  F  M    C     ++N LI   C   K+ K +        SG      +Y+ 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++    K    +  +     M   G   +   Y  L+ +  +   L D     N M++ G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           +  +  T  +L+ GL D  ++        K+V+   + + + YN LI+G  K     +A 
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 673 YLLDLMLGKGWVPDATTHGLLVGSSVG-EEIDSRR 706
            LL+ + G+G  PD   +G  +    G E+I++ +
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAK 398


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 227/513 (44%), Gaps = 41/513 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +M+   + PN+   N +L  L +   +  A     ++ ++G   N  T+ I I+GL 
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R+ ++V ++  M    +  ++  Y  +I  LC+++  +EA+   + M     +PD+ 
Sbjct: 234 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +I+  C+   + +A ++L+D +  G  P    +  ++ GLC  G  + ++    + 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                 P    +N+L++  C  G    A  ++ +MA+     D  ++NI I  LC+   I
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  ++   ++   +PD  T++  + G CK    + AL++  ++    +  D+I+Y+ +
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC+  K+ E  E F  M   GC  +  ++NILI   C   K+++A +          
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK---------- 522

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                                    V+ +M  EG   D  ++  LI        L+   L
Sbjct: 523 -------------------------VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 557

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  + + G     +T  +L+   +    +H+     ++++S     DS  Y +LI+G  
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 617

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           K     +A   L  M+ KG++P  +T G ++ S
Sbjct: 618 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINS 650



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 146/636 (22%), Positives = 252/636 (39%), Gaps = 66/636 (10%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP-NVREALISLVFSFVNHYRVNGAMRV 153
           T   YC +I  L  AG V+ ++    +      P  +    ++ + ++    R+  A+  
Sbjct: 14  TVPAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDA 73

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVL 212
              M+      +   +N ++ A+V+    + D    VY  M+ AG+ P++ T    L   
Sbjct: 74  FERMDLFACPPAAPAYNAIMDALVDA--AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSF 131

Query: 213 FETNRIESALDQFRRMHKKGCC-------------------------------PNSRTFE 241
             T R   AL   R +  +G                                 PN   F 
Sbjct: 132 CLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFN 191

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            V+  L     V ++  +LG++   G+ + L  Y   I  LC   +L EA+RL   MRA 
Sbjct: 192 KVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY 251

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             +PD +TY  LI  LC+     +A   L  M+  G  P D  +  I+ G C++    E+
Sbjct: 252 -AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEA 310

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
              L+D                           + +     ++  C      I  LC   
Sbjct: 311 TELLKD--------------------------AVFKGFVPDQVTYCSL----INGLCAEG 340

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ +A EL        + PD   Y++ V G C       AL+V  +++ +    D  +Y+
Sbjct: 341 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++ GLC++  I++A  V       G      +FN LI G C   K+D A++L    +  
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G +  T TY  ++ GL K  +  ++     +M+++GC  +   Y ILI++    NK+++ 
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           +     M + GL PD  +  +L++G      L        KL        +  +N LI  
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 580

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
              +     A  + D ML KG   D+ T+ +L+  S
Sbjct: 581 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 616



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 121/562 (21%), Positives = 233/562 (41%), Gaps = 79/562 (14%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVL 154
           A  YC ++  L   G+  +   L   M+    +PN+  A   ++ +      V  A  +L
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNL-AAFNKVLHALCKRGDVLEAGLLL 210

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             +   G  +++  +N+ +  + E  R   + V +   M +A  VP+V T N L+  L +
Sbjct: 211 GKVIQRGMSINLFTYNIWIRGLCEAGR-LPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCK 268

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
            +  + A+   RRM  +GC P+  T+  +I G    S V ++  +L +    G   +   
Sbjct: 269 KSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT 328

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I  LC E  +E A+ LF   +A  + PD + Y  L+  LC    +  A  ++ +M 
Sbjct: 329 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMA 388

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAGKFF 390
             G  P    +  ++ GLC++G   ++   + D    GY+      N L++  C   K  
Sbjct: 389 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 448

Query: 391 LAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  ++E+M +  IA D  ++N  +  LC+  ++ +  E    M++    P+  TY+  +
Sbjct: 449 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              C+    E+A +V  ++S + L  D++S++ L+ G C+   +  A  +F  + + G S
Sbjct: 509 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 568

Query: 510 LSSSSFN-----------------------------------ILIYGLCVMRKVDKAIRL 534
            ++ +FN                                   +LI G C    VD+A   
Sbjct: 569 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA--- 625

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                                            + L +M+ +G    +  +  +I S++ 
Sbjct: 626 --------------------------------YMHLVEMIKKGFIPSMSTFGRVINSLTV 653

Query: 595 QNKLKDCALFFNVMVKAGLVPD 616
            +++       ++MVK G+VP+
Sbjct: 654 NHRVFQAVGIIHIMVKIGVVPE 675



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 3/176 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I     +  +EE   +   M +E       +  +L++ F  +  + GA  +   +
Sbjct: 503 TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 562

Query: 158 NSGGFKLSVDVFNVVLGAIVEE-KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
              G+  + D FN ++GA   +     A+ +F   EM+  G   +  T   L++   +T 
Sbjct: 563 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIF--DEMLSKGHRADSYTYRVLIDGSCKTA 620

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            ++ A      M KKG  P+  TF  VI  L  N RV  +V I+  M  +G+  E+
Sbjct: 621 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 227/513 (44%), Gaps = 41/513 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +M+   + PN+   N +L  L +   +  A     ++ ++G   N  T+ I I+GL 
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R+ ++V ++  M    +  ++  Y  +I  LC+++  +EA+   + M     +PD+ 
Sbjct: 233 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +I+  C+   + +A ++L+D +  G  P    +  ++ GLC  G  + ++    + 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                 P    +N+L++  C  G    A  ++ +MA+     D  ++NI I  LC+   I
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  ++   ++   +PD  T++  + G CK    + AL++  ++    +  D+I+Y+ +
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC+  K+ E  E F  M   GC  +  ++NILI   C   K+++A +          
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK---------- 521

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                                    V+ +M  EG   D  ++  LI        L+   L
Sbjct: 522 -------------------------VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 556

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  + + G     +T  +L+   +    +H+     ++++S     DS  Y +LI+G  
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 616

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           K     +A   L  M+ KG++P  +T G ++ S
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINS 649



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 146/636 (22%), Positives = 252/636 (39%), Gaps = 66/636 (10%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP-NVREALISLVFSFVNHYRVNGAMRV 153
           T   YC +I  L  AG V+ ++    +      P  +    ++ + ++    R+  A+  
Sbjct: 13  TVPAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDA 72

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVL 212
              M+      +   +N ++ A+V+    + D    VY  M+ AG+ P++ T    L   
Sbjct: 73  FERMDLFACPPAAPAYNAIMDALVDA--AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSF 130

Query: 213 FETNRIESALDQFRRMHKKGCC-------------------------------PNSRTFE 241
             T R   AL   R +  +G                                 PN   F 
Sbjct: 131 CLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFN 190

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            V+  L     V ++  +LG++   G+ + L  Y   I  LC   +L EA+RL   MRA 
Sbjct: 191 KVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY 250

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             +PD +TY  LI  LC+     +A   L  M+  G  P D  +  I+ G C++    E+
Sbjct: 251 -AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEA 309

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
              L+D                           + +     ++  C      I  LC   
Sbjct: 310 TELLKD--------------------------AVFKGFVPDQVTYCSL----INGLCAEG 339

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ +A EL        + PD   Y++ V G C       AL+V  +++ +    D  +Y+
Sbjct: 340 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++ GLC++  I++A  V       G      +FN LI G C   K+D A++L    +  
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G +  T TY  ++ GL K  +  ++     +M+++GC  +   Y ILI++    NK+++ 
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           +     M + GL PD  +  +L++G      L        KL        +  +N LI  
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 579

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
              +     A  + D ML KG   D+ T+ +L+  S
Sbjct: 580 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 615



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 121/562 (21%), Positives = 233/562 (41%), Gaps = 79/562 (14%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVL 154
           A  YC ++  L   G+  +   L   M+    +PN+  A   ++ +      V  A  +L
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNL-AAFNKVLHALCKRGDVLEAGLLL 209

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             +   G  +++  +N+ +  + E  R   + V +   M +A  VP+V T N L+  L +
Sbjct: 210 GKVIQRGMSINLFTYNIWIRGLCEAGR-LPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCK 267

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
            +  + A+   RRM  +GC P+  T+  +I G    S V ++  +L +    G   +   
Sbjct: 268 KSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT 327

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I  LC E  +E A+ LF   +A  + PD + Y  L+  LC    +  A  ++ +M 
Sbjct: 328 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMA 387

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAGKFF 390
             G  P    +  ++ GLC++G   ++   + D    GY+      N L++  C   K  
Sbjct: 388 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 447

Query: 391 LAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  ++E+M +  IA D  ++N  +  LC+  ++ +  E    M++    P+  TY+  +
Sbjct: 448 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              C+    E+A +V  ++S + L  D++S++ L+ G C+   +  A  +F  + + G S
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 567

Query: 510 LSSSSFN-----------------------------------ILIYGLCVMRKVDKAIRL 534
            ++ +FN                                   +LI G C    VD+A   
Sbjct: 568 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA--- 624

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                                            + L +M+ +G    +  +  +I S++ 
Sbjct: 625 --------------------------------YMHLVEMIKKGFIPSMSTFGRVINSLTV 652

Query: 595 QNKLKDCALFFNVMVKAGLVPD 616
            +++       ++MVK G+VP+
Sbjct: 653 NHRVFQAVGIIHIMVKIGVVPE 674



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 3/176 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I     +  +EE   +   M +E       +  +L++ F  +  + GA  +   +
Sbjct: 502 TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 561

Query: 158 NSGGFKLSVDVFNVVLGAIVEE-KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
              G+  + D FN ++GA   +     A+ +F   EM+  G   +  T   L++   +T 
Sbjct: 562 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIF--DEMLSKGHRADSYTYRVLIDGSCKTA 619

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            ++ A      M KKG  P+  TF  VI  L  N RV  +V I+  M  +G+  E+
Sbjct: 620 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 247/562 (43%), Gaps = 72/562 (12%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++GA  ++  M + G + +V ++  ++   ++  R F D + V KEM + GI P++   N
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR-FGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  L +  R++ A      M + G  PN+ T+   I G I  S    +   + EM + 
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+       T +I   C++ K+ EA   ++ M    ++ D  TY  L+N L +N ++DDA
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
            +I  +M   G+ P    +  ++ G  ++G   ++ +  ++      +P+  +       
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII------- 664

Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
                                  +N+ +   C + EI KA ELL  M V  + P+  TY 
Sbjct: 665 -----------------------YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             + G CK  +  +A R+F ++  + LV DS  Y+ LV+G C++  +  A+ +F   +K 
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKK 760

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG-LVKLQRAKD 565
           GC+ S++ FN LI  +    K               T   T    ++M G   +  +  D
Sbjct: 761 GCASSTAPFNALINWVFKFGK---------------TELKTEVLNRLMDGSFDRFGKPND 805

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           +                  Y I+I  + ++  L+     F+ M  A L+P   T  SLL+
Sbjct: 806 V-----------------TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           G     +   +    ++ ++     D  MY+++IN   KEG+T++A  L+D M  K  V 
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908

Query: 686 D------ATTHGLLVG-SSVGE 700
           D      +T   LL G + VGE
Sbjct: 909 DGCKLSISTCRALLSGFAKVGE 930



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 219/509 (43%), Gaps = 40/509 (7%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + M+  G+VP   T + L++ L +  R+E A      M   G   ++ T+ ++I GL+  
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              D +  ++ EM   GI ++   Y C I ++ +E  +E+A  LF  M A  L+P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI   C    +    ++L +M    +  +   +  +V+G+C  G  D + N +++   
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P    +  L++      +F  A  +L++M ++ IA D   +N  I  L + + + +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A   L  MV + + P+  TY AF+ G  +   +  A +  +++    ++ + +  + L+ 
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  K+ EA   +  M   G           I G                        
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQG-----------ILG------------------------ 590

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TYT +M GL K  +  D   +  +M  +G A DV +Y +LI   S+   ++  +  F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + MV+ GL P+      LL G     ++      ++++       ++  Y  +I+G  K 
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G  ++A  L D M  KG VPD+  +  LV
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/541 (20%), Positives = 230/541 (42%), Gaps = 10/541 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  M+ +G++P       L+E       +    +    M K+    +  T+  V+KG+ 
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           ++  +D + +I+ EM   G +  +  YT +I    + ++  +A+R+ K M+   + PD  
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
            Y  LI  L +  R+D+A   L +M+  GL P    +   + G  E  +F  +  ++++ 
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 368 -KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
            +CG + +      L+   C  GK   A      M D+ I  D  ++ + +  L +N+++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A E+   M    + PD  +Y   + G  KL N + A  +F ++  + L  + I Y+ L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + G C+  +I +A E+   MS  G   ++ ++  +I G C    + +A RL       G 
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
              +  YT ++ G  +L   +  + +      +GCA     +  LI  + +  K +    
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTE 787

Query: 604 FFNVMVKAGL----VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
             N ++         P+  T   ++  L     L       +++ + + +     Y  L+
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           NG  K G  ++   + D  +  G  PD   + +++ + + E + ++        F  +  
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907

Query: 720 D 720
           D
Sbjct: 908 D 908



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 33/402 (8%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y+ MV  GI+ +  T   L+  LF+ ++++ A + FR M  KG  P+  ++ ++I G   
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  + SI  EM + G+   +  Y  ++   CR  ++E+A  L   M    L P+ +T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---E 366
           Y  +I+  C++  L +A  + ++M + GL P   V+  +V G C +   + ++      +
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-----ADCDSWNIPIRWLCENE 421
             C   T+P NAL+      GK  L   +L ++ D         +  ++NI I +LC+  
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A EL  +M  ++++P   TY++ + G  K+    +   VF +  A  +  D I YS
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 482 KLVEGLCQVEKITEA-VEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++    +    T+A V V    +KN    GC LS S+   L+ G   + +++ A     
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA----- 934

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
                          K+M  +V+LQ   D   V+ +++ E C
Sbjct: 935 --------------EKVMENMVRLQYIPDSATVI-ELINESC 961



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 104/512 (20%), Positives = 183/512 (35%), Gaps = 149/512 (29%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +EEA+ +F     L+L+P     + L++ L    RLD                   +F D
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD-------------------LFWD 207

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           + +G+            +E    +    ++ L+   C AG   L K +L K         
Sbjct: 208 VYKGM------------VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE----- 250

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
                   +      +  A +L   M+   +VP   TY   + G CK+   EDA  +  +
Sbjct: 251 --------FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302

Query: 468 VSAQSLVLDSISYSKLVEGLCQV-----------EKITEAVEV--------FCCMSKNGC 508
           + +  + LD+ +YS L++GL +            E ++  + +         C MSK G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 509 S----------------LSSSSFNILIYGLCVMRKVDKAIRL------RSL--------- 537
                              + ++  LI G C  + V +   L      R++         
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 538 -------------AY-------SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
                        AY       +SG       YT ++   ++  R  D + VL +M  +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH--- 634
            A D+  Y  LI  +S+  ++ +   F   MV+ GL P+  T  + + G  + S+     
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 635 ----------------LVSSGINKLVSDSEVL----------------DSSMYNILINGL 662
                           L +  IN+     +V+                D+  Y +L+NGL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +K      A  +   M GKG  PD  ++G+L+
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 153/655 (23%), Positives = 276/655 (42%), Gaps = 62/655 (9%)

Query: 79  ALKIFKWVSIQK--RFQHTADTYC---KMILKLGLAGNVEE-MEGLCQNMVKER------ 126
           ALK  KWV  Q     +H    YC    +++K  +  + +  +  LCQ  +  +      
Sbjct: 93  ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 152

Query: 127 ---YP---NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
              YP   ++      L+  ++    ++ A+     +   GFK SV   N++L ++V++K
Sbjct: 153 MDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDK 212

Query: 181 RGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           R   + V+ +++EM   GI PNV T N L+  L     ++ A +  ++M + G  P   T
Sbjct: 213 R--TELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++       R   ++ ++  M   GI+ ++  Y   I  LC  ++  +A  L K MR
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              + P+E+TY  LIN   +  ++  A  +  +M    L+P    +  ++ G C VG F+
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 360 ESVNFLE--DKCGYVTSPHN---------ALLECCCNAGKFFLAKCILEKMA-DRKIADC 407
           E++  L+  +  G   + H          A++ C  +    F    ++  +  D K+ + 
Sbjct: 391 EALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 450

Query: 408 DSWNIPIRWLCENEEIR----------------------KAYELLGRMVVSSVVPDCATY 445
           +      ++LC    I                        A+     M+     P   TY
Sbjct: 451 E------KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 504

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
            + + G CK  N  +A +   ++      +DS+ Y+ L+   C+   + EAV +F  M +
Sbjct: 505 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 564

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST-YTKIMLGLVKLQRAK 564
           N     S +++ L+ GLC   K   A+ L   A   GT +     YT ++ GL K    K
Sbjct: 565 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 624

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
                  +M+ +G   D  A+  +I S S + ++     FF+ M   G+ P+  T   LL
Sbjct: 625 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 684

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
           HG +    L    S  + ++ +    D   ++ LI GL K G+      LL  M+
Sbjct: 685 HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMI 739



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 148/676 (21%), Positives = 275/676 (40%), Gaps = 83/676 (12%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+  +I  L + GN+++   L + M +  +        +L+  +    R   A+ ++  M
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G +  V  +NV +  +    R    ++ + K+M K  I PN  T N L+    +  +
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLL-KKMRKEMISPNEVTYNTLINGFVKEGK 353

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE------ 271
           I  A   F  M K    PN  T+  +I G       ++++ +L  M   G++L       
Sbjct: 354 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVT 413

Query: 272 ---------------LSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
                             +TC  ++  LCR+ KL EA +    M  + L+P+ +TY+ +I
Sbjct: 414 EAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 473

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N         +A    +DMI  G  P+   +  +++GLC+ G   E+  FL ++  Y+  
Sbjct: 474 NGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL-NRLHYIPG 532

Query: 375 P-----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
                 +N LL   C +G    A  + +KM    +  D  +++  +  LC   +   A  
Sbjct: 533 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 592

Query: 429 LLGR-MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           L G  M   ++ P+   Y+  V G  K  + + A   F ++  +    D+++++ +++  
Sbjct: 593 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 652

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            +  ++ +A + F  M   G   + +++NIL++G    + + + + L S     G     
Sbjct: 653 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 712

Query: 548 STYTKIMLGL---------VKLQRA---KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            T+  ++LGL         VKL      ++  VVL +ML  G       Y  LI  M   
Sbjct: 713 LTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRV 772

Query: 596 N-----------------------------------KLKDCALFFNVMVKAGLVPDRETM 620
                                               K +D  L  + M++  L+P   T 
Sbjct: 773 GDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATF 832

Query: 621 LSLLHGLADGSQLH--LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
            +L+H     +++   L   G+ +L      LD   YN+LI G+   G ++ A  L + M
Sbjct: 833 TTLMHRFCRDAKIAEALKLKGVMELCGLK--LDVVAYNVLIMGMCANGDSAAAFELYEEM 890

Query: 679 LGKGWVPDATTHGLLV 694
             +   P+ TT+ +LV
Sbjct: 891 RHRDLCPNITTYAVLV 906



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 210/496 (42%), Gaps = 49/496 (9%)

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKM 297
           F+++I+  +    +D +V    E+  L +  + S YTC  I+  + ++ + E    LF+ 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETF-ELVGL-VGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    + P+  T+  LIN LC    L  A ++L+ M   G  PT   +  ++   C+ G+
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283

Query: 358 FDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           +  ++  ++         D C Y     N  ++  C   +   A  +L+KM    I+  +
Sbjct: 284 YKAAIELIDYMICKGIEADVCTY-----NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338

Query: 409 -SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N  I    +  +I  A ++   M    + P+C TY+A + G C + ++E+ALR+   
Sbjct: 339 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 398

Query: 468 VSAQSLVL-----------------------DSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           + A  L L                       D  + + LV  LC+  K+ EA +  C MS
Sbjct: 399 MEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 458

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQ 561
           + G   +S +++ +I G   +     A          G   +  TY  ++ GL K   L 
Sbjct: 459 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLV 518

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
            AK  L  L    + G A+D   Y  L+    +   L +    F+ MV+  ++PD  T  
Sbjct: 519 EAKKFLNRLH--YIPG-AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 575

Query: 622 SLLHGLA-DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           SLL GL   G  +  V      +   +   +  MY  L++GL K G    A Y  + M+ 
Sbjct: 576 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 635

Query: 681 KGWVPDATTHGLLVGS 696
           KG  PD      ++ S
Sbjct: 636 KGTCPDTVAFNAIIDS 651



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 206/516 (39%), Gaps = 35/516 (6%)

Query: 144 HYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE-KRGFADFVFVYKEMVKAGIVPNV 202
           H  V  AM+V   MN  G        NV++ ++  + K G A+    +  M + G+VPN 
Sbjct: 409 HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH--MSRIGLVPNS 466

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T + ++          +A   F  M K G  P+  T+  ++KGL     + ++   L  
Sbjct: 467 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 526

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           +  +   ++   Y  ++   C+   L EA+ LF  M   +++PD  TY  L+  LC   +
Sbjct: 527 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 586

Query: 323 LDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HN 377
              A  +    +  G L P   ++  +V GL + G    +  F E+     T P     N
Sbjct: 587 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 646

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           A+++ C   G+   A      M    +  +  ++NI +    + + + +   L   M+  
Sbjct: 647 AIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE 706

Query: 437 SVVPDCATYSAFVLG---------KCKLCN---YEDALRVFRQVSAQSLVLDSISYSKLV 484
            + PD  T+ + +LG           KL      E++  V  ++    ++     Y  L+
Sbjct: 707 GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLI 766

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC-------VMRKVDKAIRLRSL 537
            G+C+V  I  A ++   M   G      + + ++ GL         M  +D  +R+R L
Sbjct: 767 NGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL 826

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
                   T +T+T +M    +  +  + L +   M + G  LDV AY +LI  M     
Sbjct: 827 P-------TIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 879

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
                  +  M    L P+  T   L+  ++  + L
Sbjct: 880 SAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 915



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 76/179 (42%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  EM++ G++P       L+  +     I+ A      M   G   +      +++GL+
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              + +D++ +L  M  + +   ++ +T ++   CR+ K+ EA++L  +M    L  D +
Sbjct: 806 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 865

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            Y  LI  +C N     A ++ E+M    L P    +  +V  +       +    L D
Sbjct: 866 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTD 924



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 78/193 (40%)

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C+   S F++LI        +D A+    L    G   +  T   I+  +VK +R + + 
Sbjct: 159 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M  +G   +V  + ILI  +  +  LK        M + G VP   T  +LL+  
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               +       I+ ++      D   YN+ I+ L     +++A  LL  M  +   P+ 
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338

Query: 688 TTHGLLVGSSVGE 700
            T+  L+   V E
Sbjct: 339 VTYNTLINGFVKE 351


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 227/528 (42%), Gaps = 46/528 (8%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++ L ET  +  AL     M + GC PN  T+ ++I+GL    R+ D+  +L EM   G
Sbjct: 259 LIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRG 318

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +   +  Y  +I   C+  +L++A+ +  +M      PD+ TY  LI+ LC   + D+A 
Sbjct: 319 VVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGG-KPDEAE 377

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLEDKC-----GYVT----- 373
           ++L   I  G +PT   F +I+ G C+  K D+++      +  KC      Y       
Sbjct: 378 ELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVL 437

Query: 374 ---------------------SP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
                                SP    + ++++  C  GK   A  +  K+ + +    +
Sbjct: 438 IKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVF-KLTEHEGCRPN 496

Query: 409 SWNIP--IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           +W     I  L +++++ KA  L+ +M    + P   TY+  + G+CK   +++A R+F 
Sbjct: 497 AWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 556

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +    L  D  +Y+ L + LC   K   A E +  + K G  L+  ++  L+ G     
Sbjct: 557 MMEQNGLTPDEQAYNVLTDALC---KSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAG 613

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
             + A  L     + G    + TY+ ++  L K ++  + L +L QM + G   ++ AY 
Sbjct: 614 NTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYT 673

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           I+I  M ++ K       FN M+ +G  P   T    +       ++      I ++  +
Sbjct: 674 IIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERN 733

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               D   YN+ ING    G    A   L  M+     P+  T+ LL+
Sbjct: 734 GVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLL 781



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 137/618 (22%), Positives = 268/618 (43%), Gaps = 26/618 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L   G  +E E L    +   +        +++  +    +++ A+RV   M
Sbjct: 360 TYNSLIHGL-CGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIM 418

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            S   KL +  + V++  ++++ R   +      E+   G+ PNV     +++   +  +
Sbjct: 419 ISSKCKLDLQAYGVLISVLIKKHR-LKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGK 477

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +AL+ F+    +GC PN+ T+  +I GLI + ++  +++++ +M + GI   +  YT 
Sbjct: 478 VGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTT 537

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C++++ + A RLF+MM    L PDE  Y  L + LC++ R ++A   L   +  G
Sbjct: 538 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKG 594

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAK 393
           +  T   +  +V G  + G  + +   +E    + C   +  ++ LL+  C   K   A 
Sbjct: 595 VVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEAL 654

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            IL++M  R +  +  ++ I I  + +  +   A  +   M+ S   P   TY+ F+   
Sbjct: 655 SILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSY 714

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK+   E+A  +  ++    +  D ++Y+  + G   +  +  A      M    C  + 
Sbjct: 715 CKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNY 774

Query: 513 SSFNILIYGLCVMR----------------KVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            ++ +L+     M                 K+D   +L       G + T  TY+ I+ G
Sbjct: 775 WTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAG 834

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
             K  R ++  V+L  ML +  + + E Y +LI+   +    +  A F   M++ G  P 
Sbjct: 835 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPH 894

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
            E+   L+ GL D        +    L+      +   + IL +GL K G     S LL 
Sbjct: 895 LESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLS 954

Query: 677 LMLGKGWVPDATTHGLLV 694
            M  +    D+ T+ ++ 
Sbjct: 955 AMENRHCRIDSETYSMVT 972



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 152/700 (21%), Positives = 283/700 (40%), Gaps = 102/700 (14%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP-NVREA 133
           D ++AL  F+WV+ +  F+HTA ++  ++                Q + + R P N  + 
Sbjct: 69  DPATALAFFEWVARRPGFRHTAASHAALL----------------QLLARRRAPANYDKL 112

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFK---LSVDVFNVVLGAIVE----EKRGFADF 186
           ++S++        +  A+  +  +   G K   LS   +N+ L +++     E  G    
Sbjct: 113 VVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGK--- 169

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK--------------- 231
             +Y ++V+ G++P+  T N ++    +   +  A   FR + +                
Sbjct: 170 --LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLG 227

Query: 232 --------------------GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
                               GC  N  ++ I+I+GL     V +++ +L  M   G    
Sbjct: 228 YCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPN 287

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           L  YT +I  LC+E ++ +A  L   M    ++P   TY  +I+  C++ RL DA  I  
Sbjct: 288 LHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKT 347

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
            M   G  P D  +  ++ GLC  GK DE+   L        SP       ++   C A 
Sbjct: 348 LMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAE 406

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           K   A  +   M   K   D  ++ + I  L +   +++A + L  +  + + P+   Y+
Sbjct: 407 KIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYT 466

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + +   CK+     AL VF+    +    ++ +YS L+ GL Q +K+ +A+ +   M ++
Sbjct: 467 SIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 526

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSL----------------------------A 538
           G +    ++  LI G C   + D A RL  +                            A
Sbjct: 527 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 586

Query: 539 YS----SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           YS     G   T  TYT ++ G  K    +    ++ +M+ EGC  D   Y +L+Q++ +
Sbjct: 587 YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCK 646

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           Q KL +     + M   G+  +      ++  +    +     S  N+++S      +  
Sbjct: 647 QKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAIT 706

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y + I+   K G   +A +L+  M   G  PD  T+ + +
Sbjct: 707 YTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFI 746



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 15/320 (4%)

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N+ +R L   +      +L  ++V   ++PD  TY+  ++  CK  +   A R FR + 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
              + +D+ + + L+ G C+   + +A  +   M   GC  +  S+ ILI GLC  R V 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A+ L  +    G S    TYT ++ GL K  R  D  V+L +M   G    V  Y  +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ---LHLVSSGINKLVSD 646
               +  +LKD      +M   G  PD  T  SL+HGL  G       L++  I +  S 
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSP 390

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRR 706
           + +     +  +ING  K      A  +  +M+      D   +G+L+       I   R
Sbjct: 391 TVI----TFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVL----IKKHR 442

Query: 707 FAFDSSSFPDSVSDILAEGL 726
                    D++++I A GL
Sbjct: 443 L----KEAKDTLNEIFANGL 458


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 230/481 (47%), Gaps = 9/481 (1%)

Query: 144 HYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVD 203
           H  V+   R+L   N    K S+  F  +LG++V+    ++  V ++++M   GI  ++ 
Sbjct: 53  HNLVSSFNRLLHQKNP---KPSIFQFGKILGSLVKSNH-YSTVVSLHRQMEFNGITSDLV 108

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
            L+ L+    +  +   +     ++ K G  PN  T   +IKGL    ++  ++    ++
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
             LG  L    Y  +I  LC+  +   A++L + +    + P+ + Y  +I+ +C+   +
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NAL 379
           ++A D+  +M+  G++P    +  ++ G C VGK  ++ +          +P+    N L
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++  C   +   AK +L  M  + I  D  ++N  +   C  +E+ KA  +   +    V
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P+  +YS  + G CK+   ++A+ +F+++   +++ D ++Y+ L++GLC++ KI+ A++
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M   G      ++N ++  LC   +VDKAI L +     G      TYT ++ GL 
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K  R +D  +V   +LV+G  LDV  Y  +IQ         +     + M + G +P+  
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAV 528

Query: 619 T 619
           T
Sbjct: 529 T 529



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 167/342 (48%), Gaps = 5/342 (1%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + PNV   N +++ + +   +  A D +  M  KG  P+  T+  +I G     ++ D+ 
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +  +M    I   +  +  ++   C+E +L+EA  +  MM    + PD  TY  L++  
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTS-- 374
           C    ++ A  I   +   G+ P    +  ++ G C++ K DE++N F E  C  +    
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387

Query: 375 -PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N+L++  C  GK   A  ++++M DR +  D  ++N  +  LC+N ++ KA  LL +
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M    + PD  TY+  V G CK    EDA  VF  +  +  +LD   Y+ +++G C    
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
             E++++   M +NGC  ++ ++ I+I  L    + DKA +L
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/476 (22%), Positives = 219/476 (46%), Gaps = 5/476 (1%)

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           R +H+K   P+   F  ++  L+ ++     VS+  +M   GI  +L   + +I    + 
Sbjct: 61  RLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQL 120

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            +   +  +   +  +   P+ +T   LI  LC   ++  A    + ++ +G       +
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSY 180

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMAD 401
             ++ GLC+VG+   ++  L    G +  P    +N +++  C       A  +  +M  
Sbjct: 181 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 240

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           + I+ D  ++N  I   C   +++ A +L  +M+  ++ P+  T++  V G CK    ++
Sbjct: 241 KGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKE 300

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  V   +  Q +  D  +Y+ L++  C V+++ +A  +F  +S+ G + +  S++I+I+
Sbjct: 301 AKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIH 360

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C ++KVD+A+ L    + +       TY  ++ GL KL +    L ++ +M   G   
Sbjct: 361 GFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH 420

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D   Y  ++ ++ + +++         M   G+ PD  T  +L+ GL    +L       
Sbjct: 421 DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVF 480

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             L+    +LD ++Y  +I G    GL  ++  LL  M   G +P+A T+ +++ S
Sbjct: 481 EDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICS 536



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 137/271 (50%), Gaps = 7/271 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    + G +++   L   M+ E   PNV    I LV  F    R+  A  VL  
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI-LVDGFCKERRLKEAKNVLAM 307

Query: 157 MNSGGFKLSVDVFNVVLG--AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           M   G K  V  +N ++    +V+E         ++  + + G+ PN+ + + ++    +
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKH---IFNTISQRGVNPNIHSYSIMIHGFCK 364

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             +++ A++ F+ MH     P+  T+  +I GL    ++  ++ ++ EM D G+  +   
Sbjct: 365 IKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKIT 424

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  I+  LC+ +++++AI L   M+   + PD  TY  L++ LC+N RL+DA  + ED++
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           V G     +++  +++G C  G FDES++ L
Sbjct: 485 VKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 20/315 (6%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGA--IVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           VN A  +   M S G    V  +N ++    IV + +   D   ++ +M+   I PNV T
Sbjct: 228 VNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATD---LFNKMIFENINPNVYT 284

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N L++   +  R++ A +    M K+G  P+  T+  ++        V+ +  I   + 
Sbjct: 285 FNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G+   +  Y+ +I   C+  K++EA+ LFK M   +++PD +TY  LI+ LC+  ++ 
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---------EDKCGYVTSP 375
            A  ++++M   G+      +  I+  LC+  + D+++  L          D C Y T  
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTT-- 462

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
              L++  C  G+   A+ + E +  +  I D + +   I+  C +    ++ +LL +M 
Sbjct: 463 ---LVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519

Query: 435 VSSVVPDCATYSAFV 449
            +  +P+  TY   +
Sbjct: 520 ENGCIPNAVTYEIII 534



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 20/279 (7%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVN 148
           ++R    A     M++K G+  +V        N + +RY  V+E              VN
Sbjct: 294 KERRLKEAKNVLAMMMKQGIKPDV-----FTYNSLMDRYCLVKE--------------VN 334

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            A  +   ++  G   ++  +++++    + K+   + + ++KEM    I+P+V T N L
Sbjct: 335 KAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK-VDEAMNLFKEMHCNNIIPDVVTYNSL 393

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L +  +I  AL     MH +G   +  T+  ++  L  N +VD ++++L +M D GI
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           Q ++  YT ++  LC+  +LE+A  +F+ +     + D   Y  +I   C +   D++ D
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +L  M   G  P    +  I+  L +  + D++   L +
Sbjct: 514 LLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLRE 552



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 4/212 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PN+    I ++  F    +V+ AM +   M+       V  +N ++  +   K G   + 
Sbjct: 350 PNIHSYSI-MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLC--KLGKISYA 406

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             +  EM   G+  +  T N +L+ L + ++++ A+    +M  +G  P+  T+  ++ G
Sbjct: 407 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  N R++D+  +  ++   G  L+++ YT +I   C     +E++ L   M     +P+
Sbjct: 467 LCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGL 338
            +TYE +I  L +    D A  +L +MI  GL
Sbjct: 527 AVTYEIIICSLFDKDENDKAEKLLREMITRGL 558


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 222/473 (46%), Gaps = 15/473 (3%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFD-LGIQLELSFYTCIIPMLCRENKLEEAIR 293
           PN RT+ +V+ GL        +  +L EM D   +  +L  Y+ +I   C++ +++ A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 294 LFKMMRALDLM-PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           + + M   D M PD +TY  +++ LC + ++D A +++ +M + G+ P    F  ++ G 
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 353 CEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK----I 404
           C   K DE++      L   C       +AL+   C   +   A  + ++M  R+     
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++   I   C++  + KA ++LG M     VP+  TYS+ + G CK  + + AL +
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           FR+++++  V + ++Y+ L+ GLC   K+  A  +   M+   C   + S+N L+ G C 
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM-LVEGCALDVE 583
           + ++++A +L     +        TYT ++ G     R ++   +L  M    G   DV 
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y I++   S   +  + A F   M+   + P+  T  SL+ GL    +++       ++
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM----EV 422

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           + + +  D   Y I+I GL     T +A  LL+ M+ K   P   T   ++G+
Sbjct: 423 LKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGA 475



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 176/346 (50%), Gaps = 15/346 (4%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VPNV T + LL  L +   ++ ALD FRRM  KGC PN  T+  +I GL A  +VD +  
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 280

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           ++ EM       +   Y  ++   CR  ++EEA +LFK M A   +PD +TY  L+   C
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340

Query: 319 ENLRLDDANDILEDM-IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
              RL++A  +LE+M    G+ P    +  +V G     +F E+  F+++      +P  
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 400

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
             +++L++  C AG+   A   +E + +    D  ++ I I  LC  +   +A  LL  M
Sbjct: 401 VTYSSLIDGLCKAGRVNHA---MEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEM 457

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           V   V P   T+++ +   C+L + ++A ++   ++A  L    ++Y+ L+EG  +  ++
Sbjct: 458 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 517

Query: 494 TEAVEVFCCMSKNGCSLSSS-------SFNILIYGLCVMRKVDKAI 532
             A E+F  M +     SS+       +F+ LI GLC  R++DKA+
Sbjct: 518 EIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAM 563



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 130/597 (21%), Positives = 247/597 (41%), Gaps = 85/597 (14%)

Query: 101 KMILKLGLAGNV----EEMEGLCQNMVKERYPN-VRE-----------ALISLVFSFVNH 144
           +M+ + G+A +V      ++GLC++   +R    VRE              +L+  + N 
Sbjct: 70  EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAGI-VPNV 202
            +V+ A+++   + +   +L     + ++  +  E+R G A  +F   EM + G   P+V
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T   L++   ++  +E A+     M  + C PN  T+  ++ GL     +D ++ +   
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G    +  YT +I  LC  +K++ A  L   M A     D ++Y  L++  C   R
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
           +++A  + ++M      P    +  +VRG C   + +E                      
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEE---------------------- 347

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                    A+ +LE M      D D  +++I +      +   +A E +  M+  +V P
Sbjct: 348 ---------ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  TYS+ + G CK      A+ V + V       D ++Y+ ++EGLC  ++  EA+ + 
Sbjct: 399 NAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP----DVVTYTIVIEGLCGTDRTEEALTLL 454

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M       S  +FN +I  LC +  +D+A +L     + G      TYT ++ G  + 
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 514

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            R                   +E    L + M  + K    A        A LVP+ +  
Sbjct: 515 GR-------------------MEIAYELFEVMRRKAKKSSSA--------ANLVPE-QAF 546

Query: 621 LSLLHGLADGSQLHLVSSGINKLVS-DSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
            +L+ GL    ++    + + +L S + E  +     I ++GL + G T +A  L++
Sbjct: 547 SALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAI-VDGLLRAGRTEEAGKLIN 602



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 49/304 (16%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           L+R   N + L  A  + + +           TY  ++     A    E     Q M+  
Sbjct: 335 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                     SL+       RVN AM VL N++                           
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK-------------------------- 428

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
                         P+V T   ++E L  T+R E AL     M  K   P+  TF  VI 
Sbjct: 429 --------------PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIG 474

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR------ 299
            L     +D++  +L  M   G++  +  YT ++    R  ++E A  LF++MR      
Sbjct: 475 ALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKS 534

Query: 300 --ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
             A +L+P++  +  LI  LC+   +D A  ++E++      P ++  + IV GL   G+
Sbjct: 535 SSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGR 593

Query: 358 FDES 361
            +E+
Sbjct: 594 TEEA 597


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 251/556 (45%), Gaps = 15/556 (2%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V +++ M+++  +P V   N L  +L  T + +  L   ++M  KG   +  T  I+I
Sbjct: 73  DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  ++  + S +G++F LG +     +  ++  LC E ++ EA+ L   M     +
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +T   ++N LC   R+ +A D++  M+  G  P    +  I+  +C+ G    +++ 
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252

Query: 365 LEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L         PH      +++  C  G+   A     +M  + I A+  ++N  I   C 
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
                   +LL  M+   + P+  T+SA +    K     +A  ++ ++  + +  ++I+
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ GLC  +++ EA ++   M   GC     ++NILI G C  ++VD  +RL     
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS 432

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G    T TY+ ++ G  + ++      V  +M+ +G    +  Y IL+  + +  +L+
Sbjct: 433 LRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELE 492

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +     + M K  +  D      ++HG+ + +++    S    L S     D   YNI++
Sbjct: 493 EALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIML 552

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV-GEEIDS--------RRFAFD 710
           +GL K    S+A  L   M   G+ PD  T+  L+ + + G +I +        +R  F 
Sbjct: 553 SGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFS 612

Query: 711 S-SSFPDSVSDILAEG 725
           S +S    V D+L+ G
Sbjct: 613 SDASTVKIVMDMLSSG 628



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/561 (24%), Positives = 252/561 (44%), Gaps = 12/561 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           FN + G +   K+   D V    K+M   GI  ++ TLN ++       ++  A     +
Sbjct: 93  FNRLFGLLARTKQ--YDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGK 150

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + K G  PN+ TF  ++ GL    RV ++V ++  M       +L     I+  LC +++
Sbjct: 151 IFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDR 210

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           + EA+ L   M A    P++ TY  ++N +C++     A D+L  M    + P    +  
Sbjct: 211 VSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270

Query: 348 IVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
           I+  LC+ G+ D++++F  +      K    T  +N+L+   C+ G++     +L  M  
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFT--YNSLIGSFCSFGRWDDGAQLLRDMIT 328

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           RKI  +  +++  I  L +  ++ +A +L   M+   + P+  TY++ + G C     ++
Sbjct: 329 RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDE 388

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A ++   + ++    D  +Y+ L+ G C+ +++ + + +F  MS  G    + +++ LI 
Sbjct: 389 ANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQ 448

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C  RK+  A ++     S G      TY  ++ GL      ++ L +L QM      L
Sbjct: 449 GFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMEL 508

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D+  Y I+I  M   NK+ D    F  +   G+  D ++   +L GL   S L    +  
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALF 568

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
            K+  D    D   YN LI    +    + +  L++ M   G+  DA+T  +++      
Sbjct: 569 RKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSG 628

Query: 701 EIDSRRFAFDSSSFPDSVSDI 721
           E+D       S  F D  S +
Sbjct: 629 ELDKSFLNMLSGPFGDKSSSL 649



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 134/286 (46%), Gaps = 3/286 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           I ++      T+  +I  L   G + E + L   M+            SL++   N  R+
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRL 386

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           + A +++  M S G    +  +N+++    + K+   D + ++++M   G++ +  T + 
Sbjct: 387 DEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQ-VDDGMRLFRKMSLRGMIADTVTYST 445

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++   ++ ++  A   F+ M  +G  P   T+ I++ GL  N  +++++ IL +M    
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++L++  Y  II  +C  NK+++A  LF  + +  +  D  +Y  +++ LC+   L +A+
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGY 371
            +   M   G  P    +  ++R          SV  +E+  +CG+
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGF 611


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 227/513 (44%), Gaps = 41/513 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +M+   + PN+   N +L  L +   +  A     ++ ++G   N  T+ I I+GL 
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R+ ++V ++  M    +  ++  Y  +I  LC+++  +EA+   + M     +PD+ 
Sbjct: 236 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +I+  C+   + +A ++L+D +  G  P    +  ++ GLC  G  + ++    + 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                 P    +N+L++  C  G    A  ++ +MA+     D  ++NI I  LC+   I
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  ++   ++   +PD  T++  + G CK    + AL++  ++    +  D+I+Y+ +
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC+  K+ E  E F  M   GC  +  ++NILI   C   K+++A +          
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK---------- 524

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                                    V+ +M  EG   D  ++  LI        L+   L
Sbjct: 525 -------------------------VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 559

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  + + G     +T  +L+   +    +H+     ++++S     DS  Y +LI+G  
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 619

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           K     +A   L  M+ KG++P  +T G ++ S
Sbjct: 620 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINS 652



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 148/705 (20%), Positives = 289/705 (40%), Gaps = 99/705 (14%)

Query: 18  VNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPD---HLIRVLDN-- 72
           ++L +C  +    N I + +  D   ++    ++  ++ L   +SPD   H IR+     
Sbjct: 79  MDLFACPPAAPAYNAI-MDALVD--AAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 135

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVR 131
           T     AL++ + +         A  YC ++  L   G+  +   L   M+    +PN+ 
Sbjct: 136 TARPHIALRLLRALP-----HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNL- 189

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
            A   ++ +      V  A  +L  +   G  +++  +N+ +  + E  R   + V +  
Sbjct: 190 AAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR-LPEAVRLVD 248

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            M +A  VP+V T N L+  L + +  + A+   RRM  +GC P+  T+  +I G    S
Sbjct: 249 GM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS 307

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V ++  +L +    G   +   Y  +I  LC E  +E A+ LF   +A  + PD + Y 
Sbjct: 308 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 367

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC-- 369
            L+  LC    +  A  ++ +M   G  P    +  ++ GLC++G   ++   + D    
Sbjct: 368 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 427

Query: 370 GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
           GY+      N L++  C   K   A  ++E+M +  IA D  ++N  +  LC+  ++ + 
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 487

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            E    M++    P+  TY+  +   C+    E+A +V  ++S + L  D++S++ L+ G
Sbjct: 488 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 547

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFN------------------------------ 516
            C+   +  A  +F  + + G S ++ +FN                              
Sbjct: 548 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607

Query: 517 -----ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
                +LI G C    VD+A                                    + L 
Sbjct: 608 SYTYRVLIDGSCKTANVDRA-----------------------------------YMHLV 632

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD-RETMLSLLHGLADG 630
           +M+ +G    +  +  +I S++  +++       ++MVK G+VP+  +T+L+     AD 
Sbjct: 633 EMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILN-----ADK 687

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
            ++      +  L+    +     Y +L  G+    LT +   LL
Sbjct: 688 KEIAAPKILVEDLMKKGHI-SYPTYEVLHEGVRDNKLTRKHRMLL 731


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 214/461 (46%), Gaps = 13/461 (2%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M + GC PNS TF  ++ G     R  D   +L  M    IQ  +  Y  ++  LC+  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 288 LEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             EA  L + M  R     PD +TY  L++  C+  +++++ ++L+++I  GL P   ++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 346 VDIVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             +V  LC+  +  E++      +   C       N L+  CC      +A  +L+KMA 
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             + AD  ++N  +  LC+   +++A +LL RM  S   PD   YS+FV G CK     D
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM-SKNGCSLSSSSFNILI 519
           A +V  Q+       + ++Y+ +++GLC+  KI  A+E+   M S +GC L+   ++ ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GLC + +  +A  +      +G      TY+ ++ GL K  + ++ +  + +M +EGC 
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV-----PDRETMLSLLHGLADGSQLH 634
            +   YC L+  +    +L +       M   G       P   T  +L+ GL    ++ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
                  ++ S     D   Y+ ++ GL + G   QA  +L
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 214/451 (47%), Gaps = 14/451 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV  F    R     R+L  M +   + +V  +N +L  + + +R + +   + ++M+ 
Sbjct: 15  ALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER-WHEAEELVRDMIS 73

Query: 196 AG--IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            G    P++ T + LL    +  ++E + +  + +  +G  P++  +  V+  L  ++R+
Sbjct: 74  RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARL 133

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            +++ +L EM   G    L  +  +I   CRE  LE A  L + M A  +  D +TY  L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTL 193

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           ++ LC+  RL +A  +LE M   G  P    +   V GLC+ GK  ++   LE       
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHH 253

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAY 427
            P    +N +L+  C +GK   A  ++E+MA       +   ++  +  LC+    ++A 
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            ++  M  +   PD  TYS+ V G CK    E+A+   R+++ +    ++++Y  LV GL
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373

Query: 488 CQVEKITEAVEVFCCM-----SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           C   ++ EA  +   M       + C  S S++N LI GLC   ++D A++      S G
Sbjct: 374 CSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
                 +Y+ I+ GL +  RA    ++L+++
Sbjct: 434 CDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 167/352 (47%), Gaps = 9/352 (2%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NAL+      G+    + +LE MA R I  +  S+N  +  LC+ E   +A EL+  M+ 
Sbjct: 14  NALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMIS 73

Query: 436 SS--VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                 PD  TYS  + G CK    E++  + ++V ++ L  D++ Y+K+V  LC+  ++
Sbjct: 74  RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARL 133

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            EA+E+   M + GC  +  +FN LI G C  + ++ A  L     +SG      TY  +
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTL 193

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           M GL K  R ++   +L +M   GCA DV AY   +  + +  K+ D       M  +  
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHH 253

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLV-SDSEVLDSSMYNILINGLWKEGLTSQAS 672
            P+  T  ++L GL    ++      + ++  SD   L+   Y+ +++GL K G T +A 
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 673 YLLDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            +++ M   G  PD  T+     GL     + E +++ R        P++V+
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365



 Score = 43.1 bits (100), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 42/195 (21%)

Query: 146 RVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           +++ A+ ++  M +S G  L+V  ++ V+  + +  R   +   V + M +AG  P+V T
Sbjct: 272 KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR-TQEARSVMEAMARAGCRPDVVT 330

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNS--------------------------- 237
            + L+  L +  +IE A++  R M  +GC PN+                           
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMS 390

Query: 238 -------------RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
                         T+  +I GL    R+DD++     M   G   +   Y+ I+  L R
Sbjct: 391 SGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450

Query: 285 ENKLEEAIRLFKMMR 299
             +  +A  +   +R
Sbjct: 451 SGRALQAEMILSEVR 465


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 149/622 (23%), Positives = 259/622 (41%), Gaps = 88/622 (14%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSR 238
           + GFA F  +    +K+G   N   +N LL+ L +  R+  A+D   +RM + GC P+  
Sbjct: 111 EHGFATFGLI----LKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVV 166

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFD---LGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           ++  ++KG     R ++++ +L  M D         +  Y  +I     E ++++A  LF
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLF 226

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M    + P+ +TY  +I+ LC+   +D A  + + MI  G+ P +D +  ++ G   +
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI 286

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSW 410
           GK+ E V  LE+   +   P    + +LL   CN G+   A+   + M  + I  +   +
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIY 346

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
            I I        + + ++LL  MV + + PD   ++       K    ++A+ +F ++  
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK--- 527
           Q L  D +++  L++ LC++ ++ +AV  F  M   G + +   FN L+YGLC + K   
Sbjct: 407 QGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466

Query: 528 --------------------------------VDKAIRLRSLAYSSGTSYTTSTYTKIML 555
                                           V KA RL  L    GT     +YT ++ 
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIG 526

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G   + R  +    L  ML  G   D   Y  L+       ++ D    F  M++ G+ P
Sbjct: 527 GHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586

Query: 616 DRETMLSLLHGL--------ADGSQLHLVSSG---------------------------I 640
              T  ++LHGL        A    L++++SG                            
Sbjct: 587 GVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLF 646

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL----LVGS 696
             L S    L+ + +NI+I  L+K G    A +L   +   G VPD  T+ L    L+  
Sbjct: 647 QSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEE 706

Query: 697 SVGEEIDSRRFAFD-SSSFPDS 717
              EE D    A + S + P+S
Sbjct: 707 GYLEEFDDLFSAMEKSGTTPNS 728



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 243/535 (45%), Gaps = 10/535 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A  V   M   G K   D +N ++   +   + + + V + +EM   G+ P+  T  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEMSAHGLKPDCYTYG 312

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LL  L    R   A   F  M +KG  PN   + I+I G      + +   +L  M + 
Sbjct: 313 SLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN 372

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G+  +   +  I     ++  ++EA+ +F  M+   L PD + +  LI+ LC+  R+DDA
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDA 432

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
                 M+  G+ P   VF  +V GLC V K++++  F  +       P     N +L  
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 383 CCNAGKFFLAKCI---LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            C  G+   A+ +   +E++  R   D  S+   I   C    I +A + L  M+   + 
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTR--PDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLK 550

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G C+    +DA  VFR++    +    ++YS ++ GL    + +EA E+
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           +  M  +G   +   +NI++ GL     VD+A +L     S       +T+  ++  L K
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             R +D + + A +   G   DV  YC++ +++ E+  L++    F+ M K+G  P+   
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           + +L+  L     +    + ++KL   +  L++S   +LI+ L ++     A+ L
Sbjct: 731 LNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 205/462 (44%), Gaps = 32/462 (6%)

Query: 80  LKIFKWVSIQKRFQHTAD--------TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNV 130
           L I KW  + +  +  +         TY  ++  L   G   E      +M+++   PNV
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343

Query: 131 REALISLVFSFVNHYRVNGA---MRVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
                ++    ++ Y   GA   M  L+N M   G      +FN++  A  + K    + 
Sbjct: 344 -----AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK-KAMIDEA 397

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M + G+ P+V     L++ L +  R++ A+ +F +M  +G  PN   F  ++ G
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    + + +     EM + GI+ ++ F+  I+  LC + ++ +A RL  +M  +   PD
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            ++Y  LI   C   R+D+A   L+ M+ +GL P +  +  ++ G C  G+ D++     
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI-----RWL 417
           +      +P    ++ +L       +F  AK +   M    I     WNI I       L
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM----ITSGKQWNIWIYNIILNGL 633

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +N  + +A++L   +       +  T++  +    K    EDA+ +F  +S+  LV D 
Sbjct: 634 SKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDV 693

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            +Y  + E L +   + E  ++F  M K+G + +S   N L+
Sbjct: 694 FTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 4/280 (1%)

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           E+E +   +  + R     V PD  TYS  +   C++   E     F  +      +++I
Sbjct: 71  ESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI 130

Query: 479 SYSKLVEGLCQVEKITEAVEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIR-LRS 536
             ++L++GLC  +++ EA+++    M + GC+    S+N L+ G C  ++ ++A+  L  
Sbjct: 131 VINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHM 190

Query: 537 LAYSSGTSYTTS--TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           +A S G S   +  +Y  ++ G     +      +  +M+  G   +V  Y  +I  + +
Sbjct: 191 MADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
              +      F  M+  G+ PD +T   L+HG     +   V   + ++ +     D   
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y  L+N L   G   +A +  D M+ KG  P+   +G+L+
Sbjct: 311 YGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILI 350



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A ++  ++ S  F+L +  FN+++GA+ +  R   D + ++  +   G+VP+V T  
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRN-EDAMHLFATISSYGLVPDVFTYC 697

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            + E L E   +E   D F  M K G  PNSR    +++ L+    +  + + L ++ + 
Sbjct: 698 LIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEK 757

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
              LE S    +I +L R+     A  L +  R L+
Sbjct: 758 NFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLN 793


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 214/501 (42%), Gaps = 42/501 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV++G  P+  T N L+     T +++ A D F +M  +G   ++ ++  +I+G     R
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VD+++ +  E+     Q ++  +  ++  LC   + EE + + + M+ L   P    Y  
Sbjct: 215 VDEALELFREL----EQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----K 368
           L++  C   + ++A  +L +M   GL P       +V   C  G+   +V   E      
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
           C      +NA+++  CN GK +                                  KA  
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVY----------------------------------KAMA 356

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL +M    V PD  TY+  + G+C   + E A R+ R +    L  D  +Y+ L++ LC
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  K+ EA  +F  +   G   +S +FN +I GLC   K D A        S+G +  T 
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTY 476

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY+  +  L K + +++ L  + +ML +        Y I+I  + ++         +  M
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           V  G  PD  T  + +    +  +LH   + + ++     ++D+  YN LI+G    G T
Sbjct: 537 VSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKT 596

Query: 669 SQASYLLDLMLGKGWVPDATT 689
             A  +L  M G   +P+  T
Sbjct: 597 DHAVTILKHMTGVASMPNHFT 617



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 143/629 (22%), Positives = 264/629 (41%), Gaps = 55/629 (8%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVR 131
            T  L  A  +F  + + + F   A +Y  +I      G V+E   L + + +   P++ 
Sbjct: 176 RTQQLDVAQDLFDKMPL-RGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ---PDMY 231

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
               +LV    +  R    + +L  M   G++ +   +  ++     E++   +   +  
Sbjct: 232 TH-AALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKA-EEAEKMLN 289

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM   G+VP   T   ++       R+  A+  F  M  KGC PN  T+  +++G     
Sbjct: 290 EMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVG 349

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +V  ++++L +M + G++ ++  Y  +I   C +  +E A RL ++M    L  D+ TY 
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYN 409

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+ LC+  ++D+A  + + +   G+ P    F  ++ GLC+ GKFD +  FLE     
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLE----- 464

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
                           K   A C           D  +++  I  LC+ +  R+    + 
Sbjct: 465 ----------------KMVSAGC---------APDTYTYSPFIENLCKTKGSREGLSFID 499

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M+   V P    Y+  +    K  NY  A R++ Q+ +     D ++Y+  V   C   
Sbjct: 500 EMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEG 559

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++ EA  V   M K G  + + ++N LI G   + K D A+                T  
Sbjct: 560 RLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAV----------------TIL 603

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
           K M G+  +       ++L  +L    A DV    +   S+ +  +L D    F +M K 
Sbjct: 604 KHMTGVASMPNHFTFFILLRHLLQRRLAEDVP---LKTTSVWKTIELADVFELFELMKKN 660

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +       L++L G ++  +L  V+S ++ +  D   L+  +Y  L+N   K  +   A
Sbjct: 661 SVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDA 720

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
             LL  M+G G++P+  ++  L+     E
Sbjct: 721 WALLCSMIGHGFLPNLISYQYLLSGFTAE 749


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 152/620 (24%), Positives = 266/620 (42%), Gaps = 79/620 (12%)

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAI 176
           L +++   R P +RE+L+  +F  +   R   A+ +L  + +      S   +N VL A 
Sbjct: 90  LLESLPPSRVPPLRESLLIPLFRSLAPGR---ALHLLDQLPHRFAVSPSFRSYNTVLAAF 146

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVD-TLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
                   D + +Y+ MV    VP    T +     L    R + AL   R M + GC P
Sbjct: 147 ARAD-CHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVP 205

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           ++  ++ VI  L A   V+++ ++L EMF +G   +++ +  I+  LC   +L EA RL 
Sbjct: 206 DTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLV 265

Query: 296 KMMRALDLMPDELTYEELINCLC-----ENLR--------------------------LD 324
             M     +P+ +TY  L+  LC     E  R                          L 
Sbjct: 266 DRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLK 325

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---EDKCGYVTS--PHNAL 379
           +A ++ E M   G  P    +  ++ GLC++G+   ++  L   EDK G+  S   +  L
Sbjct: 326 EAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDK-GFAPSIVTYTIL 384

Query: 380 LECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           L   C  G +   + +LE M+D+ ++ + + +N  I  +C++  +  A   +  M     
Sbjct: 385 LHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGY 444

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD  TY+  +   C     E+A  +F  +  + +V ++I+Y+ L+  L +     +A+ 
Sbjct: 445 KPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAIS 504

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M  +GCSL   S+N LI  LC    VD++I L                        
Sbjct: 505 LANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIML------------------------ 540

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
                      L++M  +G   +  +Y +LI  + +  +++D       M+   L PD  
Sbjct: 541 -----------LSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIV 589

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T  +L++GL     +H   + + KL ++    D   YNILI+   K  L   AS LL+  
Sbjct: 590 TYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRA 649

Query: 679 LGKGWVPDATTHGLLVGSSV 698
           +  G  P+  T G++V + V
Sbjct: 650 VTSGITPNERTWGIMVQNFV 669



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 181/397 (45%), Gaps = 31/397 (7%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           +L+V +FN V+G  + + +   +   +Y+ M   G  P+  T + L+  L +  R+ SA+
Sbjct: 305 ELNVVLFNTVIGRCLLDGK-LKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAM 363

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              R M  KG  P+  T+ I++     N   D+  ++L  M D G+ + L  Y  +I  +
Sbjct: 364 KLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAV 423

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++ ++++A+R  + M++    PD  TY  +I  LC N ++++A  + E+++  G+    
Sbjct: 424 CKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANA 483

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
             +  ++  L   G + ++++   D                       L  C L      
Sbjct: 484 ITYNTLIHALLRNGSWQDAISLAND---------------------MVLHGCSL------ 516

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              D  S+N  I+ LC +  + ++  LL  M    + P+  +Y+  +   CK     DAL
Sbjct: 517 ---DIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDAL 573

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            + +++  Q L  D ++Y+ L+ GLC++  +  A+ +   +          ++NILI   
Sbjct: 574 ELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWH 633

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           C  R +  A  L + A +SG +    T+  ++   V+
Sbjct: 634 CKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 161/355 (45%), Gaps = 33/355 (9%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
           A TY  +I  L   G +     L + M  + +         L+ SF  +   +    +L 
Sbjct: 343 AHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLE 402

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M+  G  ++++ +N ++ A+ +++R   D +   +EM   G  P++ T N ++  L   
Sbjct: 403 VMSDKGLSMNLEGYNGMICAVCKDRR-MDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNN 461

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N++E A   F  +  +G   N+ T+  +I  L+ N    D++S+  +M   G  L++  Y
Sbjct: 462 NQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSY 521

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I  LCR+  ++ +I L   M    + P+ ++Y  LI+ LC+  R+ DA ++ ++M+ 
Sbjct: 522 NGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLN 581

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
             LTP    +  ++ GLC++G    ++N                               +
Sbjct: 582 QELTPDIVTYNTLINGLCKMGWMHAALN-------------------------------L 610

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           LEK+ +  + AD  ++NI I W C+   +  A  LL R V S + P+  T+   V
Sbjct: 611 LEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMV 665


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 244/532 (45%), Gaps = 36/532 (6%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG----CCPNSRTFEIVIKG 246
           + M + G++P+V T N  +  L    ++  A   FR M          PN  TF +++KG
Sbjct: 243 ERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKG 302

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +  + D+  ++  M  +G    L  Y   +  L R  +L EA  +   M A  + P+
Sbjct: 303 FCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPN 362

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY  +++ LC N  L DA  +++ M+  G+ P    +  ++ G C  GK  E+ + L 
Sbjct: 363 AYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLH 422

Query: 367 D----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +     C   T   N LL      G+   A+ +L+KM ++    D  + NI +  LC N 
Sbjct: 423 EMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNG 482

Query: 422 EIRKAYELLGRMV----------------------VSSVVPDCATYSAFVLGKCKLCNYE 459
           E+ KA E++  M                       VS+ +PD  TY+  + G CK+   E
Sbjct: 483 ELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLE 542

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A + F ++ A++L  DS++Y   +   C+  KI+ A  V   M +NGCS +  ++N LI
Sbjct: 543 EAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALI 602

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GL    ++ +   L+      G S    TY  I+  L +  +AKD + +L +ML +G +
Sbjct: 603 LGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGIS 662

Query: 580 LDVEAYCILIQSMSEQNKLK-DCALFFNVMVKAGLVPDRETMLSLL-HGLADGSQLHLVS 637
            +V ++ ILI++ S+ +  K  C LF    V   +   +E + SL+ + L  G QL    
Sbjct: 663 PNVSSFKILIKAFSKSSDFKVACELF---EVALNICGRKEALYSLMFNELLAGGQLSEAK 719

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                 +     L + MY  LI  L ++   + A+ LL  ++ KG+  D  +
Sbjct: 720 ELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHAS 771



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 251/562 (44%), Gaps = 35/562 (6%)

Query: 165 SVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           S+ ++N++L + +   R GF  ++  Y +M+ A + P   T N L+  L E+   + AL 
Sbjct: 114 SLPLYNLLLRSTLRHHRPGFVSWL--YSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQ 171

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F +M +KGCCPN  T  I+++GL     V  ++ ++       I   +  Y  ++   C
Sbjct: 172 LFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRV-VYNTLVSRFC 230

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV---IGLT- 339
           RE    EA RL + M  L ++PD +T+   I+ LC   ++ +A+ I  DM +   +GL  
Sbjct: 231 REEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPR 290

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP--HNALLECCCNAGKFFLAKCI 395
           P    F  +++G C+ G   ++   +E   K G   S   +N  L      G+   A+ +
Sbjct: 291 PNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLV 350

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L++M  + I  +  ++NI +  LC N  +  A  L+  M+ + V PD   YS  + G C 
Sbjct: 351 LDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCS 410

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                +A  V  ++       ++ + + L+  L +  +  EA E+   M++      + +
Sbjct: 411 RGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVT 470

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS----------------------TYTK 552
            NI++ GLC   ++DKA  + S  +++G +                          TYT 
Sbjct: 471 CNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTT 530

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL K+ R ++      +ML +    D   Y   I S  +Q K+         M + G
Sbjct: 531 LINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNG 590

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
                +T  +L+ GL   +Q+  +    +++       D   YN +I  L + G    A 
Sbjct: 591 CSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAI 650

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            LL  ML KG  P+ ++  +L+
Sbjct: 651 SLLHEMLDKGISPNVSSFKILI 672



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 160/361 (44%), Gaps = 28/361 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  EM++ G  PN  T N LL  L++  R   A +  ++M++K   P++ T  IV+ GL 
Sbjct: 420 VLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLC 479

Query: 249 ANSRVDDSVSILGEMFDLG---IQLELSF-------------------YTCIIPMLCREN 286
            N  +D +  I+ EM+  G   +    SF                   YT +I  LC+  
Sbjct: 480 RNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVG 539

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +LEEA + F  M A +L PD +TY+  I   C+  ++  A  +L+DM   G + T   + 
Sbjct: 540 RLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYN 599

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++ GL    +  E     ++      SP    +N ++ C C  GK   A  +L +M D+
Sbjct: 600 ALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDK 659

Query: 403 KIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            I+ +  S+ I I+   ++ + + A EL   + ++      A YS             +A
Sbjct: 660 GISPNVSSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYSLMFNELLAGGQLSEA 718

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             +F     + L L +  Y  L+  LCQ E++ +A  +   +   G     +SF  +I G
Sbjct: 719 KELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDG 778

Query: 522 L 522
           L
Sbjct: 779 L 779



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 185/456 (40%), Gaps = 32/456 (7%)

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           L  Y  ++    R ++      L+  M A  + P   T+  LI+ LCE+   D A  + E
Sbjct: 115 LPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFE 174

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CGYVTSP-HNALLECCCNAGK 388
            M   G  P +     +VRGLC  G   +++  + +   C       +N L+   C    
Sbjct: 175 KMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCREEM 234

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV----PDCA 443
              A+ ++E+M +  +  D  ++N  I  LC   ++ +A  +   M + + +    P+  
Sbjct: 235 NNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVV 294

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKITEAVEVFCC 502
           T++  + G CK     DA R   +   +    DS+  Y+  + GL +  ++ EA  V   
Sbjct: 295 TFNLMLKGFCKHGMMGDA-RGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDE 353

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   G   ++ ++NI++ GLC    +  A  L  L   +G    T  Y+ ++ G     +
Sbjct: 354 MVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGK 413

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             +   VL +M+  GC  +      L+ S+ ++ +  +       M +    PD  T   
Sbjct: 414 VFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNI 473

Query: 623 LLHGLADGSQLHLVS---------------------SGINKLVSDSEVL-DSSMYNILIN 660
           +++GL    +L   S                     S IN + + S  L D   Y  LIN
Sbjct: 474 VVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLIN 533

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           GL K G   +A      ML K   PD+ T+   + S
Sbjct: 534 GLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWS 569



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 8/262 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L   G +EE +     M+ +          + ++SF    +++ A RVL +M
Sbjct: 527 TYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDM 586

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G   ++  +N ++  +    + F +   +  EM + GI P++ T N ++  L E  +
Sbjct: 587 ERNGCSKTLQTYNALILGLGSNNQIF-EIYGLKDEMKEKGISPDICTYNNIITCLCEGGK 645

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL---ELSF 274
            + A+     M  KG  PN  +F+I+IK    +S       +  E+F++ + +   + + 
Sbjct: 646 AKDAISLLHEMLDKGISPNVSSFKILIKAFSKSS----DFKVACELFEVALNICGRKEAL 701

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y+ +   L    +L EA  LF++     L      Y++LI  LC++ RL DAN +L  +I
Sbjct: 702 YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLI 761

Query: 335 VIGLTPTDDVFVDIVRGLCEVG 356
             G       F+ ++ GL + G
Sbjct: 762 DKGYGFDHASFMPVIDGLSKRG 783


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 137/567 (24%), Positives = 241/567 (42%), Gaps = 34/567 (5%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V + LI +   ++    +  ++ +   M   GF  SV   N +LG+IV+     + + 
Sbjct: 123 PSVFDILIRV---YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWS 179

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           F+ KEM+K  I P+V T N L+ VL      + +    ++M K G  P   T+  V+   
Sbjct: 180 FL-KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R   ++ +L  M   G+  ++  Y  +I  LCR N+  +   L + MR   + P+E
Sbjct: 239 CKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  L+N      ++  A  +L +M+  GL+P    F  ++ G    G F E++     
Sbjct: 299 VTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH- 357

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                      ++E                  A   I    S+ + +  LC+N E   A 
Sbjct: 358 -----------MME------------------AKGLIGTEVSYGVLLDGLCKNAEFDLAR 388

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
               RM  + V     TY+  + G CK    ++A+ +  ++S   +  D ++YS L+ G 
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGF 448

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+V ++  A E+ C + + G S +   ++ LIY  C M  + + IR+       G +   
Sbjct: 449 CRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDH 508

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            T+  ++  L K  +  +    +  M  +G   +  ++  LI       +       F+ 
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDE 568

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M K G  P   T  SLL GL  G  L      +  L +    +D+ M N LI  + K G 
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGN 628

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
             +A  L   M+ +  +PD+ T+  L+
Sbjct: 629 LDKAVSLFGEMVQRSILPDSFTYTSLI 655



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/508 (22%), Positives = 215/508 (42%), Gaps = 21/508 (4%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEE 290
           C  N   F+I+I+  +    + DS+ I   M   G     S YTC  I+  + +  +   
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYG--FNPSVYTCNAILGSIVKSCEDVS 176

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
                K M    + PD  T+  LIN LC       ++ +++ M   G  PT   +  ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 351 GLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             C+ G+F  ++  L+         D C Y     N L+   C + +      +L  M  
Sbjct: 237 WYCKKGRFKAAIELLDHMNLKGVNADVCTY-----NMLIHDLCRSNRSAKGYLLLRDMRK 291

Query: 402 RKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           R I   + ++N  +       ++  A +LL  M+   + P+  T++A + G     N+++
Sbjct: 292 RMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL++F  + A+ L+   +SY  L++GLC+  +   A   +  M +NG  +   ++  +I 
Sbjct: 352 ALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC    +D+A+ + +     G      TY+ ++ G  ++ R K    ++ ++   G + 
Sbjct: 412 GLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSP 471

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +   Y  LI +      LK+    +  M+  G  PD  T   L+  L    ++      +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
             + SD  + ++  ++ LING    G   +A  + D M   G  P   T+G L+      
Sbjct: 532 RCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 699 GEEIDSRRFAFDSSSFPDSVSDILAEGL 726
           G  I + +F     + P +V  ++   L
Sbjct: 592 GHLIAAEKFLKSLQNVPAAVDTVMCNTL 619



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 134/654 (20%), Positives = 270/654 (41%), Gaps = 70/654 (10%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL--- 154
            TY  MI  L   G ++E   +   M K+          +L+  F    R+  A  ++   
Sbjct: 405  TYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRI 464

Query: 155  --VNMNSGGFKLSVDVFNVV-LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
              V ++  G   S  ++N   +G + E  R       +Y+ M+  G  P+  T N L+  
Sbjct: 465  YRVGLSPNGIIYSTLIYNCCRMGCLKETIR-------IYEAMILEGNTPDHFTFNVLVTS 517

Query: 212  LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
            L +  ++  A +  R M   G  PN+ +F+ +I G  ++     + S+  EM  +G    
Sbjct: 518  LCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPT 577

Query: 272  LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
               Y  ++  LC+   L  A +  K ++ +    D +    LI  +C++  LD A  +  
Sbjct: 578  FFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFG 637

Query: 332  DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED------------------------ 367
            +M+   + P    +  ++ GLC  GK   ++ F ++                        
Sbjct: 638  EMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKA 697

Query: 368  ---KCGYVTSPH-------------NALLECCCNAGKFFLAKCILEKMADR-KIADCDSW 410
               K G+                  NA+++     GK      +L +M ++ +  +  ++
Sbjct: 698  GQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTY 757

Query: 411  NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
            NI +    + + +  ++ L   M++S ++PD  T  + +LG C+    E  L++ +    
Sbjct: 758  NILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFIC 817

Query: 471  QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
            + + +D  +++ L+   C   +I  A ++   M+  G SL  ++ + ++  L    +  +
Sbjct: 818  RGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQE 877

Query: 531  AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
            +  +       G S  +  Y  ++ GL ++   K   VV  +M+         A   +++
Sbjct: 878  SRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937

Query: 591  SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH------GLADGSQLHLVSS--GINK 642
            ++++  K  + +L    M+K  LVP   +  +L+H       + +  +L +V S  G+  
Sbjct: 938  ALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLK- 996

Query: 643  LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                   LD   YN+LI GL  +G  + A  L + M   G++ + TT+  LVG 
Sbjct: 997  -------LDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGG 1043


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 227/465 (48%), Gaps = 7/465 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V+    F   +   ++M   GI P + T N L+       ++  A     ++
Sbjct: 56  FNKILSSLVKMNH-FKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKI 114

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ T   +++GL  N +V ++++    +      L+   Y  +I  LC+  + 
Sbjct: 115 LKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGET 174

Query: 289 EEAIRLFKMMRALDLM-PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             A++L + +  L L+ PD + Y  +I+  C++  + DA D+  +MIV  + P    F  
Sbjct: 175 RAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNS 234

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C VG+  E+V  L +      +P+    N L++  C  G+   A  +L  M  + 
Sbjct: 235 LIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  +  ++   +      +E+ KA  +   + +  V P+  +YS  + G CK    ++A+
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++F+++  +++  ++++YS L++GLC+  +I++  ++   ++  G   +  ++N L+ GL
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   +VDKAI L +     G     STYT ++ GL K  R KD   +   +L +G  L++
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNI 474

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             Y ++I  + ++    +     + M   G +PD  T  +L+  L
Sbjct: 475 RMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/538 (22%), Positives = 233/538 (43%), Gaps = 75/538 (13%)

Query: 253 VDDSVSILGEMFDLGIQLELSF-YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +DD+VS    +  +       F +  I+  L + N  + AI   + M    + P+  T+ 
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----- 366
            LINC     +L+ A  ++  ++ +G  P       ++RGLC  GK  E++NF +     
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 367 ----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCEN 420
               D+  Y T     L+   C +G+   A  +L K+    +   D   +   I   C++
Sbjct: 153 RFHLDQVSYGT-----LINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKD 207

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + +  AY+L   M+V  + P+  T+++ + G C +   ++A+ +  ++S  ++  +  ++
Sbjct: 208 KLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTF 267

Query: 481 SKLVEGLCQ-----------------------------------VEKITEAVEVFCCMSK 505
           + L++GLC+                                   V+++ +A  VF  +S 
Sbjct: 268 NILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISL 327

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G + +  S++++I GLC  + VD+A++L    +    +  T TY+ ++ GL K  R  D
Sbjct: 328 RGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISD 387

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           +  ++ ++   G   ++  Y  L+  + + +++         M   G+ PD  T  +L+ 
Sbjct: 388 VWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVD 447

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL    +L         L+     L+  MY ++INGL KEG   +A  LL  M   G +P
Sbjct: 448 GLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMP 507

Query: 686 DATTHGLLV---------GSSV--------------GEEIDSRRFAFDSSSFPDSVSD 720
           DA T+  L+         G +V              G+E    +   D+SS+P S  +
Sbjct: 508 DAVTYETLISALFKNNKNGKAVKLLREMIARESDCSGKEQSREKKDKDTSSYPGSFHN 565



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 41/303 (13%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D++CK  L +       EM      +VK+ YPNV     SL++ F    ++  A+ +L  
Sbjct: 202 DSFCKDKLVIDAYDLYSEM------IVKKIYPNV-VTFNSLIYGFCIVGQLKEAVGLLNE 254

Query: 157 MNSGGFKLSVDVFNVVLGAIVEE--------------KRG----------FADFVFVYKE 192
           M+      +V  FN+++  + +E              K+G            D  F+ KE
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314

Query: 193 MVKA----------GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           + KA          G+ PNV + + ++  L +   ++ A+  F+ MH K   PN+ T+  
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GL  + R+ D   ++ E+ + G    +  Y  ++  LC+ +++++AI L   M+   
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD  TY  L++ LC+N RL DA  I +D++  G      ++  ++ GLC+ G FDE++
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494

Query: 363 NFL 365
           + L
Sbjct: 495 SLL 497



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 38/261 (14%)

Query: 110 GNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G V++   +   M+K+   PNV     SL+  +     VN A  V   ++  G   +V  
Sbjct: 278 GEVKKATSVLSVMIKQGVEPNV-VTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHS 336

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           ++V++  + + K    + V ++KEM    + PN  T + L++ L ++ RI    D    +
Sbjct: 337 YSVMINGLCKNKM-VDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEI 395

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
           + +G   N  T+  ++ GL  N +VD ++++L +M D GIQ ++S YT ++  LC+  +L
Sbjct: 396 NNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRL 455

Query: 289 EEA---------------IRLFKMM-----------RALDL---------MPDELTYEEL 313
           ++A               IR++ +M            AL L         MPD +TYE L
Sbjct: 456 KDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETL 515

Query: 314 INCLCENLRLDDANDILEDMI 334
           I+ L +N +   A  +L +MI
Sbjct: 516 ISALFKNNKNGKAVKLLREMI 536


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 238/546 (43%), Gaps = 65/546 (11%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M + G +P+V + 
Sbjct: 107 RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSY 166

Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGL--------IANSRVD 254
           N LL+ L + NR + AL+    M      G  P+  ++  V+ G         +    +D
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMD 226

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ +L  M   G+  +   Y  I+   C   + +EAI   K MR+  + P+ +TY  L+
Sbjct: 227 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 286

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N LC+N R  +A  I + M   GL P    +  +++G C+ G+  ES    +        
Sbjct: 287 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVK 346

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
           P    +N L++ CC AGK                                  + +A +LL
Sbjct: 347 PDIITYNTLIDGCCLAGK----------------------------------MDEATKLL 372

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV   V PD  TY   + G C++   +DAL +F+++ +  +  + I+Y+ +++GL   
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +   A E++  ++K+G  L  S++NI+++GLC     D+A+R+      +     T T+
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++  L+K  R  +   + A     G   DV  Y ++ +++ EQ  L++    F  M +
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 552

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G   D                  +++S + KL+   ++  +  Y  +I+        S 
Sbjct: 553 NGCSADS----------------RMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 596

Query: 671 ASYLLD 676
           AS+LL+
Sbjct: 597 ASFLLE 602



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 239/534 (44%), Gaps = 20/534 (3%)

Query: 184 ADFVFVYKEMVKAG---IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           A  V  Y  M +AG   + P V T   L+       R++        + KKG   ++ TF
Sbjct: 71  AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130

Query: 241 EIVIKGLIANSRVDDSVSI-LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM- 298
             ++KGL A+ R  D++ I L  M +LG   ++  Y  ++  LC EN+ +EA+ L  MM 
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190

Query: 299 --RALDLMPDELTYEELINCLCEN--------LRLDDANDILEDMIVIGLTPTDDVFVDI 348
             R     PD ++Y  ++N   +           +D A ++L  M+  G+ P    +  I
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 250

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C  G+  E++  L+        P    +++L+   C  G+   A+ I + M  R +
Sbjct: 251 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 310

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++   ++  C+   + ++ +L   MV   V PD  TY+  + G C     ++A +
Sbjct: 311 EPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 370

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +   + +  +  D ++Y  L+ G C+V ++ +A+ +F  M  +G S +  ++NI++ GL 
Sbjct: 371 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 430

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             R+   A  L      SGT    STY  I+ GL K     + L +   + +    L+  
Sbjct: 431 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 490

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            + I+I ++ +  ++ +    F      GLVPD  T   +   L +   L  +      +
Sbjct: 491 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 550

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
             +    DS M N ++  L + G  ++A   L ++  K +  +A+T   L+ SS
Sbjct: 551 EENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 604


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 205/430 (47%), Gaps = 11/430 (2%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKR--GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           G   ++ +V   ++ A  E  R    AD V    EM   G+   V+T N++L V  ET  
Sbjct: 97  GSLPMAHEVMRGMVAAFGEAGRLPEAADMVL---EMRSHGLPLCVETANWVLRVGLETGS 153

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
              A   F  M + G CP+ R+F  ++       +V++  ++L  M+  G  L+ +  T 
Sbjct: 154 FVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTV 213

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  LC + + ++    F+ M  +   P+ + Y   I+ LC+   +  A  +LE+M+  G
Sbjct: 214 VVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 273

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVN-FLE--DKCGYVTSPHN--ALLECCCNAGKFFLA 392
           L P       ++ GLC++G  + +   FL+      Y  + H    ++   C  GK   A
Sbjct: 274 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 333

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + +L +M ++ +  + +++   I   C+     +A+EL+ +M     +P+  TY+A + G
Sbjct: 334 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 393

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK    ++A +V R  ++Q L  D I+Y+ L+   C+   IT A+++F  M +NGC   
Sbjct: 394 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 453

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++  LI   C  R+++++ +        G   T  TYT ++ G  K+ R+   L V  
Sbjct: 454 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFE 513

Query: 572 QMLVEGCALD 581
           +M+  GC  D
Sbjct: 514 RMVQNGCFAD 523



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/420 (22%), Positives = 188/420 (44%), Gaps = 10/420 (2%)

Query: 243 VIKGLIAN----SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           V++G++A      R+ ++  ++ EM   G+ L +     ++ +         A ++F  M
Sbjct: 105 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 164

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               + PDE ++  L+   C   ++++ + +L  M   G +  +     +VR LCE G+F
Sbjct: 165 TRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 224

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
            +   F        T P    + A ++  C       A  +LE+M  R +  +  +    
Sbjct: 225 KDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 284

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVV-PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
           I  LC+     +A+ L  +++ SS   P+  TY+  + G C+      A  +  ++  Q 
Sbjct: 285 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 344

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  ++ +Y+ L+ G C+      A E+   M + G   +  ++N +I G C   K+ +A 
Sbjct: 345 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 404

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           ++  +A S G  +   TYT ++    K       L +  +M+  GC  D+EAY  LI + 
Sbjct: 405 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 464

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +Q ++++   FF+  +  GL+P ++T  S++ G     +  +      ++V +    DS
Sbjct: 465 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADS 524



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 143/363 (39%), Gaps = 12/363 (3%)

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGY----VTSPHNALLECCCNAGKFFLAKCILEK 398
           +V   +V    E G+  E+ + + +   +         N +L      G F  A+ + + 
Sbjct: 104 EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 163

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M    +  D  S+   +   C   ++ +   LL  M       D AT +  V   C+   
Sbjct: 164 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 223

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           ++D    FR++       + ++Y+  ++GLC+   + +A  V   M   G   +  +   
Sbjct: 224 FKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 283

Query: 518 LIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQM 573
           LI GLC +   ++A RL   L  SS       TYT ++ G     KL RA+ LLV   +M
Sbjct: 284 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV---RM 340

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           + +G   +   Y  LI    +           N M + G +P+  T  +++ G     ++
Sbjct: 341 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 400

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 +    S     D   Y ILI    K+G  + A  L D M+  G  PD   +  L
Sbjct: 401 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 460

Query: 694 VGS 696
           + +
Sbjct: 461 IST 463


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 214/453 (47%), Gaps = 6/453 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           SV  FN++LG+IV+ K  +   + + K+M   GI P++ TL+ L+        +  A   
Sbjct: 77  SVVEFNMILGSIVKMKH-YPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              + K+G   N+ T   ++KGL  N  V  ++     +   G  L+   Y  +I  LC+
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
                EA  L   M    + P+ + Y  +++ LC++  + +A D+  D++  G+ P    
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 345 FVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
           +  ++ G C +G++ E    L D            +N L++  C  G    A  +   M 
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 401 DR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           +R +  D  ++N  +   C   ++ +A +L        + PD  +Y+  ++G CK    +
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +AL +F +++ + L  + ++YS L++GLC+  +I+ A E+F  +   G S +  ++NI++
Sbjct: 376 EALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             LC ++ VDKAI L +L +  G +   S+Y  ++ G  K +R  + + +  +M      
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            D   Y  LI  + +  ++      FNVM   G
Sbjct: 496 PDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 220/495 (44%), Gaps = 8/495 (1%)

Query: 178 EEKRGFA---DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
           ++K GF    D V ++  ++    +P+V   N +L  + +     +A+   ++M  +G  
Sbjct: 51  KKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGIT 110

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+  T  I+I        +  + S+LG +   G QL     T I+  LC   ++ +A+  
Sbjct: 111 PSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEF 170

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              + A   + DE+TY  LIN LC+     +A ++L  M    + P   ++  IV GLC+
Sbjct: 171 HDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCK 230

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDS 409
            G   E+ +   D  G    P    +  L+   C  G++     +L  M DR +  +  +
Sbjct: 231 DGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYT 290

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +NI I  LC+   + KA+++   M+     PD  T++  + G C   +  +A ++F   +
Sbjct: 291 YNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFA 350

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
              +  D  SY+ L+ G C+  +I EA+ +F  M+    + +  +++ LI GLC   ++ 
Sbjct: 351 ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRIS 410

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  L S  +  G S    TY  ++  L K+Q     + +   M   G   +V +Y ILI
Sbjct: 411 YAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILI 470

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
               +  ++ +    F  M +  LVPD  T   L+ GL    ++       N +      
Sbjct: 471 NGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPP 530

Query: 650 LDSSMYNILINGLWK 664
           +D   YNIL +   K
Sbjct: 531 VDVITYNILFDAFSK 545



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 135/292 (46%), Gaps = 1/292 (0%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + I  A  L  R++    +P    ++  +    K+ +Y  A+ + +Q+  + +    ++ 
Sbjct: 57  DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           S L+   C +  +  A  V   + K G  L++ +   ++ GLC+  +V KA+       +
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G      TY  ++ GL K+   ++   +L +M  +    +V  Y +++  + +   + +
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               ++ +V  G+ PD  T   L+HG     Q   V+  +  +V  +  L+   YNILI+
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATT-HGLLVGSSVGEEIDSRRFAFDS 711
            L K+G+  +A  + +LM+ +G  PD  T + L+ G  +  ++   R  FD+
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDT 348



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 133/303 (43%), Gaps = 32/303 (10%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +MV   +  NV T N L++ L +   +  A D    M ++G  P+  TF  ++ G    +
Sbjct: 278 DMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYN 337

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V ++  +     + GI  ++  Y  +I   C+ N+++EA+ LF  M    L P+ +TY 
Sbjct: 338 DVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYS 397

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+ LC++ R+  A ++   +   G +P    +  ++  LC++   D+++         
Sbjct: 398 SLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIE-------- 449

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
                                  +   M +R +  +  S+NI I   C+++ I +A  L 
Sbjct: 450 -----------------------LFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLF 486

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M   ++VPD  TY+  + G CK      A  +F  +      +D I+Y+ L +   ++
Sbjct: 487 EEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546

Query: 491 EKI 493
           + +
Sbjct: 547 QHV 549


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 153/673 (22%), Positives = 292/673 (43%), Gaps = 62/673 (9%)

Query: 34  PLSSETDMIKSHQTTDYEAKIQSLRHNLSP-------DHLIRVLDN-TNDLSSALKIFKW 85
           P+  +++++        + + + LR  L P       DHLI VL N  ND    L  F+W
Sbjct: 58  PIIQDSELVHRISIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEW 117

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
             +++    + +  C +      + +++    L Q+       +V  +    V   +  Y
Sbjct: 118 ACLRR--DPSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTY 175

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVL--GAIVEEKRGFADFVFVYKEMVKAGIVPNVD 203
           +           + G      D+F  VL    +++E R   D      +M+  G++ +VD
Sbjct: 176 K-----------DWGSDPRVFDIFFQVLVEAGMLDEARKLFD------KMLNYGLLISVD 218

Query: 204 TLNYLLEVLFET-NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           + N  +  L E  + I+ AL  F    + G C N+ ++ I+   L    RV ++  +L +
Sbjct: 219 SCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQ 278

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G   ++  Y+ +I   C+  +L+  ++L + M+   L P+  TY  +I  LC+  +
Sbjct: 279 MELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 338

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
           + +A  +L +MI  G+ P   ++  ++ G C++G               V+S +      
Sbjct: 339 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN--------------VSSAYR----- 379

Query: 383 CCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
                       + ++M  RKI+ D  ++   I  LC+   + +A +L   MV   + PD
Sbjct: 380 ------------LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TY+A + G CK    ++A  +  Q+    L  + ++Y+ L +GLC+  ++  A E+  
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G  L+  ++N L+ GLC    +D+A++L      +G      TYT +M    K +
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
                  +L QML       V  + +L+        L+D       M++ G++P+  T  
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           SL+      + +   +     + +   V D + YNILI G  K     +A +L   M+GK
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 667

Query: 682 GWVPDATTHGLLV 694
           G+    +++  L+
Sbjct: 668 GFNLTVSSYNALI 680


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 152/690 (22%), Positives = 301/690 (43%), Gaps = 50/690 (7%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + S   +LSP  +I++L +  +  SAL IF  V+    + HT   +  ++ +L       
Sbjct: 1   MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRL------- 53

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVV 172
                               L++   ++  +   + A+ +   M+   G +  +  +N +
Sbjct: 54  ----------------FDPKLVA--HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 95

Query: 173 LGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           L A++E  K   A+  F+Y E +  G+ PN+ T N L+++     + + A +    M  +
Sbjct: 96  LNALIESNKWDEAESFFLYFETM--GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQ 153

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+  ++  +I  L  N  + D++ +  EM + G+  +++ Y  +I    ++  +  A
Sbjct: 154 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 213

Query: 292 IRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
             ++ ++++   + P+  +Y  +IN LC+  + D++ +I   M           +  ++ 
Sbjct: 214 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 273

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC-----ILEKMAD 401
           GLC  G  D +    ++      SP    +N +L     AG+  + +C     ++EK   
Sbjct: 274 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR--IEECLELWKVMEKEGC 331

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           R +    S+NI IR L EN ++ +A  +   +       D  TY   V G CK      A
Sbjct: 332 RTVV---SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 388

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           L +  +       LD+ +YS ++ GLC+  ++ E   V   M+K+GC  +    N +I G
Sbjct: 389 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVING 448

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                K++ A+R      S G   T  TY  ++ GL K +R  +   ++ +ML +G   +
Sbjct: 449 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPN 508

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  Y +L+  + +  KL      +   ++ G  PD +    ++HGL    ++       +
Sbjct: 509 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 568

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGLLVGS 696
           ++   + V +   +N L+ G +K     +AS + D +L  G  PD      T  GL    
Sbjct: 569 EMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCH 628

Query: 697 SVGEEIDSRRFAFDSSSFPDSVS-DILAEG 725
            + + +     A D    P +++ +IL +G
Sbjct: 629 RISDAVGFLNDAVDRGVLPTAITWNILVQG 658



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 185/393 (47%), Gaps = 12/393 (3%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT---FEIVIK 245
           VYKEM + G+ P+V   N +L       RIE  L+ ++ M K+GC    RT   + I+I+
Sbjct: 287 VYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC----RTVVSYNILIR 342

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           GL  N++VD+++SI   + +     +   Y  ++  LC+   L +A+ + +         
Sbjct: 343 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 402

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D   Y  +IN LC   RLD+   +L+ M   G  P   V   ++ G     K ++++ F 
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462

Query: 366 ED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
            +     C      +N L+     A +F  A  ++++M  +    +  ++++ +  LC+ 
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           +++  A  L  + +     PD   ++  + G C     EDAL+++ ++  ++ V + +++
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+EG  +V     A +++  + + G      S+NI + GLC   ++  A+   + A  
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 642

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            G   T  T+  ++ G + L+   + + V A M
Sbjct: 643 RGVLPTAITWNILVQGYLALKGYMEPVFVPASM 675



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 189/449 (42%), Gaps = 42/449 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           +Y  MI  L   G  +E   +   M K           +L+        ++GA RV   M
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 291

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G    V V+N +L   +   R   + + ++K M K G    V + N L+  LFE  +
Sbjct: 292 AENGVSPDVVVYNTMLNGYLRAGR-IEECLELWKVMEKEG-CRTVVSYNILIRGLFENAK 349

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A+  +  + +K CC +S T+ +++ GL  N  ++ ++SIL E  +    L+   Y+ 
Sbjct: 350 VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 409

Query: 278 IIPMLCRE-----------------------------------NKLEEAIRLFKMMRALD 302
           +I  LCRE                                   +KLE+A+R F  M +  
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P  +TY  LIN L +  R  +A  ++++M+  G  P    +  ++ GLC+  K D ++
Sbjct: 470 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMAL 529

Query: 363 NF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
           N     LE         HN ++   C++GK   A  +  +M  R  + +  + N  +   
Sbjct: 530 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF 589

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  +  +A ++   ++   + PD  +Y+  + G C      DA+        + ++  +
Sbjct: 590 YKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA 649

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           I+++ LV+G   ++   E V V   M  N
Sbjct: 650 ITWNILVQGYLALKGYMEPVFVPASMKGN 678


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/592 (24%), Positives = 260/592 (43%), Gaps = 47/592 (7%)

Query: 28  SCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS 87
           S   ++ +S+ ++++ +   ++ +   ++ +  +  D L        D    L+ F+W  
Sbjct: 13  SVFQSLSISTISELLSNQHWSELKPHFRTTKPAIFLDQLFNA---GVDSELVLRFFQWSQ 69

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVR---------------E 132
            + R  +  +T  K++  L  +    ++      +VK     V                 
Sbjct: 70  KEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCAN 129

Query: 133 ALIS--LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           ALI+  LV ++V +  ++ A  V   +   GFKLS++  N +L A+V+      +  +VY
Sbjct: 130 ALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNET-GEMQYVY 188

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI-- 248
           KEM+K  I PN+ T N  +  L +  ++  A D    +   G  PN  T+  +I G    
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 249 -ANSRVDDSVSILGEMFDLGI-QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
            +  ++  + +IL EM    I   E++F T +I   C++  +  A   F+ M+   L P+
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNT-LIDGFCKDENVLAAKNAFEEMQRQGLKPN 307

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  LIN L  N +LD+A  + + M+ +GL P    F  ++ G C+     E+    +
Sbjct: 308 IVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFD 367

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           D       P+    N +++  C AG       +   M D  I  +  ++N  I  LC N+
Sbjct: 368 DIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQ 427

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +R A +LL  M    +  D  TY+  + G CK      A ++  ++    +  + ++Y+
Sbjct: 428 NVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L++G C    +  A++V   M K G   +  ++N+LI G C   K++ A RL +     
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK 547

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           G +   +TY                 VV  +ML +G   D+E +   I SMS
Sbjct: 548 GLNPNRTTYD----------------VVRLEMLEKGFIPDIEGHLYNISSMS 583



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/465 (21%), Positives = 197/465 (42%), Gaps = 43/465 (9%)

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
           C N+   ++++   + N  +  +  +   + D G +L L+    ++  L + N+  E   
Sbjct: 127 CANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQY 186

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           ++K M    + P+  T+   IN                                   GLC
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFIN-----------------------------------GLC 211

Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCC---NAGKFFLAKCILEKMADRKIAD 406
           + GK +++ + +ED   +  SP    +N L++  C   +AGK + A  IL++M   KI  
Sbjct: 212 KAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICP 271

Query: 407 CD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
            + ++N  I   C++E +  A      M    + P+  TY++ + G       ++A+ ++
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++    L  + ++++ L+ G C+ + I EA ++F  +++     ++ +FN +I   C  
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             +++   L +     G     STY  ++ GL + Q  +    +L +M       DV  Y
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTY 451

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            ILI    +  +          M+  G+ P+  T  +L+ G      L        ++  
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           + +  +   YN+LI G  K G    A+ LL+ ML KG  P+ TT+
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 143/322 (44%), Gaps = 4/322 (1%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N LL       +    + + ++M  R+I  +  ++NI I  LC+  ++ KA +++  +  
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALR---VFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
               P+  TY+  + G CK  +     R   + +++ A  +  + I+++ L++G C+ E 
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           +  A   F  M + G   +  ++N LI GL    K+D+AI L       G      T+  
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K +  K+   +   +  +    +   +  +I +  +   +++     N M+  G
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           + P+  T   L+ GL     +      +N++ +     D   YNILI G  K+G  S+A 
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAE 468

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            LL  ML  G  P+  T+  L+
Sbjct: 469 KLLGEMLNVGVKPNHVTYNTLM 490



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 9/275 (3%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  VFR+V      L   S + L+  L +  +  E   V+  M K     + ++FNI I 
Sbjct: 149 ACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFIN 208

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL---VVLAQMLVEG 577
           GLC   K++KA  +     + G S    TY  ++ G  K   A  +     +L +ML   
Sbjct: 209 GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK 268

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              +   +  LI    +   +      F  M + GL P+  T  SL++GL++  +L    
Sbjct: 269 ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
           +  +K+V      +   +N LING  K+ +  +A  L D +  +  VP+A T   ++ + 
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388

Query: 698 VGEEIDSRRFA-----FDSSSFPD-SVSDILAEGL 726
               +    FA      D   FP+ S  + L  GL
Sbjct: 389 CKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGL 423


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 257/547 (46%), Gaps = 22/547 (4%)

Query: 67  IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER 126
           + V++N  +   + K+FK       F+    T   MI     +G+ + +E L   +  E 
Sbjct: 48  MEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLEN 107

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEE---KRG 182
              +  + I +  ++   +  + A+ +   M +    K SV  FN VL  I+ E    RG
Sbjct: 108 RVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG 167

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
              + +V    +   I PN  + N +++ L +   ++ A++ FR M ++ C P+  T+  
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ GL    R+D++V +L EM   G       Y  +I  LC++  L    +L   M    
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +P+E+TY  LI+ LC   +LD A  +LE M+     P D  +  ++ GL +  +  ++V
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347

Query: 363 NFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             L   ++ GY  + H  + L+      GK   A  +  KMA++    +   +++ +  L
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG--KCKLCNYEDALRVFRQVSAQSLVL 475
           C   +  +A E+L RM+ S  +P+  TYS+ + G  K  LC  E+A++V++++       
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC--EEAVQVWKEMDKTGCSR 465

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +   YS L++GLC V ++ EA+ V+  M   G    + +++ +I GLC +  +D A++L 
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525

Query: 536 S---LAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
                     +     TY  ++ GL     + RA DL   L  ML  GC  DV      +
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL---LNSMLDRGCDPDVITCNTFL 582

Query: 590 QSMSEQN 596
            ++SE++
Sbjct: 583 NTLSEKS 589



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 219/479 (45%), Gaps = 38/479 (7%)

Query: 219 ESALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS---- 273
           + A+D F RM  +  C  S ++F  V+  +I        +     + +  + + +S    
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  +I  LC+   ++ AI +F+ M     +PD  TY  L++ LC+  R+D+A  +L++M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
              G +P+  ++  ++ GLC+ G        +++                      FL  
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN---------------------MFLKG 287

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           C+  ++         ++N  I  LC   ++ KA  LL RMV S  +P+  TY   + G  
Sbjct: 288 CVPNEV---------TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K     DA+R+   +  +   L+   YS L+ GL +  K  EA+ ++  M++ GC  +  
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            +++L+ GLC   K ++A  + +   +SG      TY+ +M G  K    ++ + V  +M
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              GC+ +   Y +LI  +    ++K+  + ++ M+  G+ PD     S++ GL     +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518

Query: 634 HLVSSGINKLVSDSEV---LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                  ++++   E     D   YNIL++GL  +   S+A  LL+ ML +G  PD  T
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 116/528 (21%), Positives = 215/528 (40%), Gaps = 105/528 (19%)

Query: 56  SLRHNLSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           ++  N+SP+ L     I+ L     +  A+++F+ +  +++      TYC +        
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTL-------- 228

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
               M+GLC+                         R++ A+ +L  M S G   S  ++N
Sbjct: 229 ----MDGLCK-----------------------EERIDEAVLLLDEMQSEGCSPSPVIYN 261

Query: 171 VVLGAIVEEKRGFADFVFVYK---EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V++  + ++     D   V K    M   G VPN  T N L+  L    +++ A+    R
Sbjct: 262 VLIDGLCKK----GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M    C PN  T+  +I GL+   R  D+V +L  M + G  L    Y+ +I  L +E K
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            EEA+ L++ M      P+ + Y  L++ LC   + ++A +IL  MI  G  P    +  
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437

Query: 348 IVRGLCEVGKFDESVNFLE--DKCGYVTSP--HNALLECCCNAGKFFLAKCILEKM---- 399
           +++G  + G  +E+V   +  DK G   +   ++ L++  C  G+   A  +  KM    
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497

Query: 400 -----------------------------------ADRKIADCDSWNIPIRWLCENEEIR 424
                                                +   D  ++NI +  LC  ++I 
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A +LL  M+     PD  T + F+    +  N  D  R F +              +LV
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE--------------ELV 603

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
             L + ++++ A  +   M     +  +S++ +++  +C  +K++ AI
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+N+ I+ LC+   + +A E+   M     +PD  TY   + G CK    ++A+ +  ++
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            ++      + Y+ L++GLC+   +T   ++   M   GC  +  ++N LI+GLC+  K+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           DKA+ L     SS       TY  ++ GLVK +RA D + +L+ M   G  L+   Y +L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  + ++ K ++    +  M + G  P+                                
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPN-------------------------------- 396

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                +Y++L++GL +EG  ++A  +L+ M+  G +P+A T+  L+
Sbjct: 397 ---IVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 144/365 (39%), Gaps = 97/365 (26%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L L G +++   L + MV  +         +L+   V   R   A+R+L +M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353

Query: 158 NSGGFKLSVDVFNVVLGAIVEE--------------KRGFADFVFVY------------- 190
              G+ L+  +++V++  + +E              ++G    + VY             
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413

Query: 191 -------KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                    M+ +G +PN  T + L++  F+T   E A+  ++ M K GC  N   + ++
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM----- 298
           I GL    RV +++ +  +M  +GI+ +   Y+ II  LC    ++ A++L+  M     
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533

Query: 299 ------------------------RALDLM---------PDELT---------------- 309
                                   RA+DL+         PD +T                
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593

Query: 310 -----YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
                 EEL+  L +  R+  A  I+E M+   L P    +  IVR +C+  K + ++  
Sbjct: 594 KGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI-- 651

Query: 365 LEDKC 369
             DKC
Sbjct: 652 --DKC 654



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 35/188 (18%)

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           SFN++I  LC +R VD+AI +              TY  +M GL K +R  + +++L +M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             EGC+     Y +LI  + ++  L       + M   G VP+  T              
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT-------------- 294

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                                YN LI+GL  +G   +A  LL+ M+    +P+  T+G L
Sbjct: 295 ---------------------YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333

Query: 694 VGSSVGEE 701
           +   V + 
Sbjct: 334 INGLVKQR 341


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/621 (23%), Positives = 267/621 (42%), Gaps = 28/621 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L   G ++E E L    +   +        +L+  +    R++ A+RV  NM
Sbjct: 356 TYNSLIYGL-CGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            S   KL +  + V++  ++++ R   +      EM   G+ PNV     +++   +   
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCR-LKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGM 473

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +AL+ F+ M  +GC PN+ T+  +I GLI + ++  +++++ +M + GI   +  YT 
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTT 533

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C++++ + A RLF+MM    L PDE  Y  L + LC++ R ++A   L   +  G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKG 590

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAK 393
           +  T   +  +V G  + G  D +   +E    + C      ++ LL+  C   K   A 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 394 CILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            IL++M    +  C+  ++ I I  + +  +   A  L   M+ S   P   TY+ F+  
Sbjct: 651 SILDQMTVSGV-KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK+   E+A  +  ++    +  D ++Y   + G   +  +  A      M    C  +
Sbjct: 710 YCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPN 769

Query: 512 SSSFNILIYGLCVMR----------------KVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
             ++ +L+     M                 +++   +L       G + T  TY+ I+ 
Sbjct: 770 CWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIA 829

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K  R ++  V+L  ML +  + + E Y +LI+   +         F   M++ G  P
Sbjct: 830 GFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQP 889

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
             E+   L+ GL D        S    L+      +   + IL +GL K G     S LL
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             M  +    D+ ++ +L  S
Sbjct: 950 AAMDNRHCRIDSESYSMLTDS 970



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 163/704 (23%), Positives = 299/704 (42%), Gaps = 38/704 (5%)

Query: 25  SSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDH---LIRVLDNTNDLSSALK 81
           ++++  +T  + +E   + S +  +  +  + L  +++  H   L R   +  D ++AL 
Sbjct: 12  AAVASTSTPDIVAELGRVLSTRRWNKGSAYKRLSPSVTAAHVADLFRAPVSPLDPATALA 71

Query: 82  IFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK--ERYPNVREALISL-V 138
            F+WV+ +  F+HTA ++  ++  L         + L  +M+       +VREA+ ++  
Sbjct: 72  FFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQA 131

Query: 139 FSFVNHYRV-------NGAMRVLVNMN-------------SGGFKLSVDVFNVVLGAIVE 178
              V   R+       N A+R L+  +               G       +N ++ A   
Sbjct: 132 IRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYC- 190

Query: 179 EKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            K+G       Y  +++ +G+  +  T N LL     T+ +  A      M   GC  N 
Sbjct: 191 -KKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNE 249

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            ++ I+I+GL     V +++ ++  M   G  L L  YT +I  LC+E ++ +A  L   
Sbjct: 250 YSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDE 309

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    ++P   TY  +I+  C++ R+ DA  I   M   G  P D  +  ++ GLC  GK
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GK 368

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
            DE+   L        +P       L+   C A +   A  +   M       D  ++ +
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  L +   +++A E L  M  + + P+   Y++ + G CK+     AL VF+ +  + 
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
              ++ +Y  L+ GL Q +K+ +A+ +   M ++G +    ++  LI G C   + D A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF 548

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           RL  +   +G +     Y  +   L K  RA++    L +   +G  L    Y  L+   
Sbjct: 549 RLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGF 605

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
           S+       A+    MV  G   D  T   LL  L    +L+   S ++++       + 
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             Y I+I+ + KEG    A  L + M+  G  P ATT+ + + S
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/523 (21%), Positives = 221/523 (42%), Gaps = 40/523 (7%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK    +G+ G   E+  L ++  +  +PN      SL++  +   +++ AM ++  
Sbjct: 466 DGYCK----VGMVGAALEVFKLMEH--EGCHPNAW-TYGSLIYGLIQDKKLHKAMALITK 518

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G    V  +  ++    + K  F +   +++ M K G+ P+    N L + L ++ 
Sbjct: 519 MQEDGITPGVIAYTTLIQGQCK-KHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG 577

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R E A   +  + +KG      T+  ++ G       D +  ++ +M + G + +L  Y+
Sbjct: 578 RAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC++ KL EA+ +   M    +  + + Y  +I+ + +  + D A  +  +MI  
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P+   +   +   C++G+ +E+ + + +      +P    ++  +  C + G    A
Sbjct: 695 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRA 754

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENE---------------------EIRKAYELLG 431
              L++M D   A C+  N    WL                         E+   ++LL 
Sbjct: 755 FSTLKRMVD---ASCEP-NCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLE 810

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           RM+   + P   TYS+ + G CK    E+A  +   +  +++  +   Y+ L++  C ++
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIK 870

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
              + V     M + G      S++ LI GLC     D+A  L         ++    + 
Sbjct: 871 LFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWK 930

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            +  GL+K         +LA M    C +D E+Y +L  S+ E
Sbjct: 931 ILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIRE 973



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 104/244 (42%)

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           DA++  R+V  + LVL    Y+  +  L + +      +++  + + G    + ++N +I
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
              C    +  A R   L   SG    T T   ++LG  +    +    +L  M + GC 
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +  +Y ILIQ + E   +++  +   +MV+ G   +      L+ GL    ++H     
Sbjct: 247 RNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGL 306

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           ++++     V     YN +I+G  K G    A  +  LM   G  PD  T+  L+    G
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366

Query: 700 EEID 703
            ++D
Sbjct: 367 GKLD 370


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 146/643 (22%), Positives = 285/643 (44%), Gaps = 40/643 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  +I     A  V+E   L   M ++  +P VR   + ++F+     R   A+ +   
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTV-IIFALCQLGRKTEALNMFKE 334

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M     + +V  + V++ ++ E+   F D   +   M++ G++P+V T N L++   +  
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSN-FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKG 393

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
              SAL+    M    C PN+RT+  +I G      +  ++S+L +M +  +Q  +  Y 
Sbjct: 394 LSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYN 453

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C+E  L  A +L  +M    L+PDE TY   I+ LC+   +++A  + E +   
Sbjct: 454 ILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK 513

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK-----CGYVTSPHNALLECCCNAGKFFL 391
           G+   + ++  ++ G C+VGK  +   FL DK     C   +  +N+L++  C    F  
Sbjct: 514 GIKANEVIYSTLIDGYCKVGKVSDG-RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKE 572

Query: 392 AKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A+ +++ M  R I    D++ I I  L +++E  +A+++  +M+ +   PD   Y+AF+ 
Sbjct: 573 ARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIH 632

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             C     +DA  +  +++A+ ++ D++ Y+  ++   +   I  A  +   M + GC  
Sbjct: 633 AYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692

Query: 511 SSSSFNILIYGLC---------------------------VMRKVDKAIRLRSLA--YSS 541
           S  +++ LI  L                              R+VD    L         
Sbjct: 693 SYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEH 752

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G +   +TY K + GL K+   +    +   M  +G + + + Y  L+    +     + 
Sbjct: 753 GCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEA 812

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
             + ++M++   +P  ++   LL GL D              +      D  ++ +LI+G
Sbjct: 813 IRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDG 872

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-EEID 703
           L K+GL+ + S L  +M  +G      T+ +L+    G +EID
Sbjct: 873 LLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 155/683 (22%), Positives = 294/683 (43%), Gaps = 27/683 (3%)

Query: 21  TSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSAL 80
            S   S S  + IP  ++   I S         +++L  +++P H+  +     D  +AL
Sbjct: 37  ASLPQSFSVEHDIP--AQLFSILSRPNWQKHPSLKNLIPSIAPSHISALFALNLDPQTAL 94

Query: 81  KIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS 140
             F W+  +  F+H   ++  M+  L   G +   E            N+R  +I    S
Sbjct: 95  AFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAE------------NMRILMIKSTDS 142

Query: 141 FVNHYRVNGAMRVL-VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
             N   V   +R +   +++  FKL++  +N++L  ++       +   VY EM+   + 
Sbjct: 143 SENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLL-MLLSRFLMIDEMKSVYLEMLDDMVT 201

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN+ TLN ++    +   +  A     ++ + G   ++ T+  +I G   N  VD + +I
Sbjct: 202 PNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAI 261

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
              M + G       YT +I   C   +++EA++LF  M   +  P   TY  +I  LC+
Sbjct: 262 FLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQ 321

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--P 375
             R  +A ++ ++M      P    +  ++  LCE   FD++   L    + G + S   
Sbjct: 322 LGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVT 381

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLG 431
           +NAL++  C  G   L+   LE ++  +  +C     ++N  I   C  + I KA  LL 
Sbjct: 382 YNALIDGYCKKG---LSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLH 438

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +M+   + P+  TY+  + G+CK  +   A ++   ++   LV D  +YS  ++ LC+  
Sbjct: 439 KMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRG 498

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EA  +F  + + G   +   ++ LI G C + KV     L     S+G    + TY 
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYN 558

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K +  K+  +++  M+        + Y ILI ++ + ++       F+ M+  
Sbjct: 559 SLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLST 618

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G  PD     + +H      +L      I K+ +   + D+ +Y + I+   + G    A
Sbjct: 619 GSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGA 678

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             +L  M   G  P   T+  L+
Sbjct: 679 FGILKRMHEVGCEPSYYTYSCLI 701



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 117/539 (21%), Positives = 208/539 (38%), Gaps = 60/539 (11%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK     GL+ +  E+  L ++      PN R     L+  F     ++ AM +L  
Sbjct: 387 DGYCKK----GLSASALEILSLMES--NNCSPNAR-TYNELILGFCRGKNIHKAMSLLHK 439

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE---MVKAGIVPNVDTLNYLLEVLF 213
           M     + +V  +N+++    +E     D    YK    M ++G+VP+  T +  ++ L 
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKE----GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLC 495

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +   +E A   F  + +KG   N   +  +I G     +V D   +L +M   G      
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI 555

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I   C+E   +EA  L  +M   D+ P   TY  LI+ L ++   D A+D+ + M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDES------------------VNFLEDKCGYVTSP 375
           +  G  P   ++   +   C  G+  ++                       D  G   S 
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675

Query: 376 HNA------LLECCCNAGKFFLAKCILEKMADRK----------------IADCDSWNIP 413
             A      + E  C    ++   C+++ +++ K                +A  D  N  
Sbjct: 676 DGAFGILKRMHEVGCEPS-YYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNC- 733

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
             W   + E     +L G+M      P+  TY  F+ G CK+   E A R+F  +  +  
Sbjct: 734 --WRRVDYEF--TLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQ 789

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             +   Y+ L+   CQ+    EA+     M +N       S  +L+ GL      +KA R
Sbjct: 790 SPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKR 849

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +         +Y    +  ++ GL+K   +     +   M  +GC +  + Y +LI+  
Sbjct: 850 VFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 107/492 (21%), Positives = 183/492 (37%), Gaps = 77/492 (15%)

Query: 75  DLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           DL SA   +K +S+        D  TY   I  L   G VEE   L +++ KE+     E
Sbjct: 464 DLGSA---YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL-KEKGIKANE 519

Query: 133 ALIS-LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
            + S L+  +    +V+    +L  M S G   +   +N ++    +EK  F +   +  
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN-FKEARLLVD 578

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            M+K  I P  DT   L++ L + +  + A D F +M   G  P+   +   I    ++ 
Sbjct: 579 IMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHG 638

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R+ D+  ++ +M   GI  +   YT  I    R   ++ A  + K M  +   P   TY 
Sbjct: 639 RLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYS 698

Query: 312 ELI------------------------------NCLCENLRLDDANDILEDMIVIGLTPT 341
            LI                              NC    +  +   D+   M   G  P 
Sbjct: 699 CLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCW-RRVDYEFTLDLFGKMAEHGCAPN 757

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
            + +   + GLC+VG  + +    +       SP    +N+LL C C  G +  A     
Sbjct: 758 ANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEA----- 812

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                           IRWL               M+ +  +P   +    + G     N
Sbjct: 813 ----------------IRWL-------------DIMIENRHLPHLDSCKLLLCGLYDEGN 843

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            E A RVF          D + +  L++GL +     +  ++F  M   GC +   ++++
Sbjct: 844 DEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSM 903

Query: 518 LIYGLCVMRKVD 529
           LI G   ++++D
Sbjct: 904 LIEGFDGIQEID 915


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 234/512 (45%), Gaps = 30/512 (5%)

Query: 34  PLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQ 93
           P+S+ T    S Q         +L  N +P  L+  L   ND ++AL++  W S Q  F+
Sbjct: 30  PISNSTLSFASTQ-----QHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFR 84

Query: 94  HTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV 153
             +  Y +++ KLG  G+   M+ + Q M        R  L+  + S+   + +   +  
Sbjct: 85  PNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAK-FELYEEILC 143

Query: 154 LVNMNSGGFKLSVD--VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           +V +    F L++D  ++N +L  +V+  +       V+  MV  GI P+V T N L++ 
Sbjct: 144 IVEVMEVEFGLALDTLLYNFLLNVLVDGNK-LKLVENVHSTMVSKGIKPDVSTFNILIKA 202

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L + ++I  A+     M   G  P+ +TF  +++G I    +D +  +  +M D G  + 
Sbjct: 203 LCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVT 262

Query: 272 LSFYTCIIPMLCRENKLEE----------------AIRLFKMMRALDLMPDELTYEELIN 315
                 ++   C+E ++EE                AI L+  M+     PDE TY  LI+
Sbjct: 263 NVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLID 322

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGY 371
            LC   +L +A  +L +M + G       +  ++ G C+  K +E+    +         
Sbjct: 323 SLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSR 382

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
            +  +N L++  C + +   A  ++++M    +  D  ++N  + + C   +I+KA +++
Sbjct: 383 NSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIV 442

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M  +   PD  TY   + G CK    E A R+ R +  + +VL   +Y+ +++ L + 
Sbjct: 443 QTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKR 502

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++  EA+ +F  M + G +  + ++ I+  GL
Sbjct: 503 KRTKEAMRLFREMEEKGNTPDAFTYKIVFRGL 534



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/514 (22%), Positives = 210/514 (40%), Gaps = 65/514 (12%)

Query: 278 IIPMLCRENKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           ++  L R+N    A+RL     +  +  P+   YEE++  L +    +   DIL++M  +
Sbjct: 57  LLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGL 116

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDES---VNFLEDKCGYV--TSPHNALLECCCNAGKFFL 391
                  V +  +    +   ++E    V  +E + G    T  +N LL    +  K  L
Sbjct: 117 DCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKL 176

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            + +   M  + I  D  ++NI I+ LC+  +IR A  ++  M    +VPD  T++  + 
Sbjct: 177 VENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQ 236

Query: 451 GKCKLCNYEDALRV---------------------------------------------- 464
           G  +  N + A RV                                              
Sbjct: 237 GFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHT 296

Query: 465 -----FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
                + ++  +    D  +Y+ L++ LC   K+ EA+ +   M  +GC+ +  ++N LI
Sbjct: 297 MAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLI 356

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C  +K+++A  +       G S  + TY  ++ GL K +R ++   ++ QM++EG  
Sbjct: 357 DGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLK 416

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            D   Y  ++     +  ++  A     M   G  PD  T  +L+ GL    ++ + S  
Sbjct: 417 PDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRL 476

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV----- 694
           +  +     VL    YN +I  L+K   T +A  L   M  KG  PDA T+ ++      
Sbjct: 477 LRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSN 536

Query: 695 -GSSVGEEIDSRRFAFDSSSFPD-SVSDILAEGL 726
            G  +GE +D      +    P+ S   +LAEGL
Sbjct: 537 SGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGL 570



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 144/319 (45%), Gaps = 16/319 (5%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +Y EM   G  P+  T N L++ L    +++ AL   R M   GC  N  T+  +I G  
Sbjct: 301 LYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFC 360

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            N +++++  I  +M   G+      Y  +I  LC+  +++EA +L   M    L PD+ 
Sbjct: 361 KNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKF 420

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-- 366
           TY  ++   C    +  A DI++ M   G  P    +  ++ GLC+ G+ + +   L   
Sbjct: 421 TYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI 480

Query: 367 DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCEN-EE 422
              G V +PH  N +++      +   A  +  +M ++    D  ++ I  R L  +   
Sbjct: 481 QLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGP 540

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I +A + +  M+    +P+ +++     G C L + ED L     +    LV++  ++S+
Sbjct: 541 IGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSL-SMEDTL-----IKLVDLVMEKANFSQ 594

Query: 483 ----LVEGLCQVEKITEAV 497
               ++ G  ++ K  +A+
Sbjct: 595 NEVVMIRGFLKIRKFQDAL 613


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 157/646 (24%), Positives = 280/646 (43%), Gaps = 54/646 (8%)

Query: 63  PDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           P  L+RVL+      + AL+ F+W   Q  F+ +  TY  ++  L   G +     + + 
Sbjct: 47  PQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEK 106

Query: 122 MVKERYPN---VREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE 178
           +V  +  N       L  L++ +     +   + V   M S G    +   N VL  + +
Sbjct: 107 VVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRD 166

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
                     VY  MV+ GI P V T N +L+   +  +++ AL    +M K GC PN  
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ +++ GL  +  ++ +  ++ EM  LG+++    Y  +I   C + +L+EA RL + M
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
            +   +P  +TY  ++  LC+  R+ DA  +L+ M+   L P    +  ++ G   +G  
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346

Query: 359 DES-VNFLEDKC-GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
            E+ + F E +  G V S   +N L++  C  G   +A  + ++M       D  ++ I 
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +R  C+   +  A EL   M+   + PD   Y   ++G+ KL +   A  +  ++ A+  
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 466

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D I+Y+  ++GL ++  + EA E+   M  NG                          
Sbjct: 467 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV------------------------ 502

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                     +YT+  +  +M G ++  RA     V  +ML +G    V  Y +LI S +
Sbjct: 503 ------PDHVTYTSIIHAHLMAGHLRKARA-----VFLEMLSKGIFPSVVTYTVLIHSYA 551

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
            + +LK   L F  M + G+ P+  T  +L++GL    ++        ++ +     +  
Sbjct: 552 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKY 611

Query: 654 MYNILIN-----GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            Y ILIN     G W+E L      L   ML +   PD+ TH  L+
Sbjct: 612 TYTILINENCNLGHWQEALR-----LYKDMLDREIQPDSCTHSALL 652



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 228/511 (44%), Gaps = 11/511 (2%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLI-ANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +E  L  F +M  KG  P+ +    V++ L   +S +D +  +   M + GI+  +  Y 
Sbjct: 135 LEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYN 194

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++   C++ K++EA++L   M+ +  +P+++TY  L+N L  +  L+ A +++++M+ +
Sbjct: 195 TMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL 254

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           GL  +   +  ++RG CE G+ DE+    E+       P    +N ++   C  G+   A
Sbjct: 255 GLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDA 314

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + +L+ M ++ +  D  S+N  I        I +A+ L   +    +VP   TY+  + G
Sbjct: 315 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDG 374

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C++ + + A+R+  ++       D  +++ LV G C++  +  A E+F  M   G    
Sbjct: 375 LCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPD 434

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++   I G   +    KA  ++    + G      TY   + GL KL   K+   ++ 
Sbjct: 435 RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVK 494

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +ML  G   D   Y  +I +      L+     F  M+  G+ P   T   L+H  A   
Sbjct: 495 KMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRG 554

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +L L      ++       +   YN LINGL K     QA      M  KG  P+  T+ 
Sbjct: 555 RLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYT 614

Query: 692 LLVGS--SVGEEIDSRRF---AFDSSSFPDS 717
           +L+    ++G   ++ R      D    PDS
Sbjct: 615 ILINENCNLGHWQEALRLYKDMLDREIQPDS 645



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 5/223 (2%)

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           L  D F  +   + E K G     F + +EM+  G  P++ T N  ++ L +   ++ A 
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           +  ++M   G  P+  T+  +I   +    +  + ++  EM   GI   +  YT +I   
Sbjct: 491 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSY 550

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
               +L+ AI  F  M    + P+ +TY  LIN LC+  ++D A     +M   G++P  
Sbjct: 551 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNK 610

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
             +  ++   C +G + E++   +D       P    H+ALL+
Sbjct: 611 YTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLK 653



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 1/149 (0%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+ EM+  GI P+V T   L+       R++ A+  F  MH+KG  PN  T+  +I GL 
Sbjct: 527 VFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 586

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              ++D +     EM   GI      YT +I   C     +EA+RL+K M   ++ PD  
Sbjct: 587 KVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSC 646

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIG 337
           T+  L+  L ++ +       LE++I  G
Sbjct: 647 THSALLKHLNKDYKSHVVRH-LENVIAAG 674


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 239/562 (42%), Gaps = 42/562 (7%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           LR       L ++L+   D    L+ FKW   + R  +  +   K++  L  +    ++ 
Sbjct: 39  LRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVR 98

Query: 117 GLCQNMVKERYPNVREALISL-----------------VFSFVNHYRVNGAMRVLVNMNS 159
               + VK     V     SL                 V ++V +  ++ A         
Sbjct: 99  SFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKD 158

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
            GFKLS+   N +L A+V+E +   D  +VYKEM+K  I  N++T N  +  L    ++ 
Sbjct: 159 YGFKLSLTSCNPLLSALVKENK-IGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLN 217

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLI---ANSRVDDSVSILGEMFDLGIQLELSFYT 276
            A D    M   G  PN  T+  ++ G     +  ++  + + + EM    I      + 
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFN 277

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C++  +  A + F+ M+   L P+ +TY  LIN LC N +L++A D+ + M+ +
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA 392
           GL P    +  ++ G C+     E+    +D       P+    N +++  C  G     
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +   M D  I  +  ++N  I  LC  ++++ A ELL  M    +  D  TY+  + G
Sbjct: 398 FSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK     +A ++  ++    L  + ++Y+ L++G C   K+  A+ V   M K     +
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++N+LI G C + K++ A  L +     G +   +TY                 +V  
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD----------------IVRL 561

Query: 572 QMLVEGCALDVEAYCILIQSMS 593
           +ML +G + D+E +   I SMS
Sbjct: 562 EMLEKGFSPDIEGHLYNISSMS 583



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 200/437 (45%), Gaps = 43/437 (9%)

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           D G +L L+    ++  L +ENK+ +   ++K M    +  +  T+   IN LC   +L+
Sbjct: 158 DYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLN 217

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCE---VGKFDESVNFLEDKCGYVTSPH----N 377
            A D +EDM   G++P    +  +V G C+    GK  ++  F+++       P+    N
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFN 277

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            L++  C       AK   E+M  + +  +  ++N  I  LC N ++ +A +L  +MV  
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            + P+  TY+A + G CK    ++A +VF  VS Q LV + I+++ +++  C+   + E 
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             +   M   G   + S++N LI GLC  RK D                           
Sbjct: 398 FSLCSSMLDEGILPNVSTYNCLIAGLC--RKQD--------------------------- 428

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
              LQ AK+L   L +M  +G   DV  Y ILI  + + +K ++     N M   GL P+
Sbjct: 429 ---LQAAKEL---LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN 482

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  +L+ G     +L    +   ++  + +  +   YN+LI G  K      A+ LL+
Sbjct: 483 HVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLN 542

Query: 677 LMLGKGWVPDATTHGLL 693
            ML KG  P+ TT+ ++
Sbjct: 543 EMLEKGLNPNRTTYDIV 559



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 146/322 (45%), Gaps = 4/322 (1%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N LL       K    + + ++M  R+I  + +++NI I  LC   ++ KA + +  M  
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRV---FRQVSAQSLVLDSISYSKLVEGLCQVEK 492
             + P+  TY+  V G CK  +     +     +++ A  +  + ++++ L++G C+ E 
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           +  A + F  M K G   +  ++N LI GLC   K+++AI L       G      TY  
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K +  K+   V   +  +    +V  +  +I +  ++  +++     + M+  G
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           ++P+  T   L+ GL     L      +N++ +     D   YNILI+GL K   +  A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            LL+ M   G  P+  T+  L+
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLM 490



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 7/266 (2%)

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           C YE     F +       L   S + L+  L +  KI +   V+  M K     + ++F
Sbjct: 148 CAYE----AFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTF 203

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL---VVLAQ 572
           NI I GLC   K++KA        + G S    TY  ++ G  K   A  +      + +
Sbjct: 204 NIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKE 263

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML      +   +  LI    +   +      F  M K GL P+  T  SL++GL +  +
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGK 323

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L       +K+V      +   YN LING  K+ +  +A+ + D +  +  VP+  T   
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383

Query: 693 LVGSSVGEEIDSRRFAFDSSSFPDSV 718
           ++ +   E +    F+  SS   + +
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGI 409


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 158/759 (20%), Positives = 305/759 (40%), Gaps = 81/759 (10%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           E ++  L  N +P+ +I VL    D+++A+  F+W        H  + Y  +++ +    
Sbjct: 85  ENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTR 144

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
               +E + + M    +       I +V SF+   ++  A   +  M    F+ +   + 
Sbjct: 145 KFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYT 204

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            ++GA+    R     + ++++M + G   NV     L+ V     R+++AL     M  
Sbjct: 205 NLIGAL-STSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS 263

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
               P+   + + I       +VD +     EM   G+ L+   YT +I +LC+ ++L E
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+ LF+ M     +P    Y  +I       + +DA  +LE     G  P+   +  I+ 
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383

Query: 351 GLCEVGKFDESVN-FLEDKCGYVT--SPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
            L   G+ DE++  F E K   +   S +N +++  C AGK   A  + + M D  +  +
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 407 CDSWNIPIRWLCENEE-----------------------------------IRKAYELLG 431
             + NI +  LC+ +                                    + +AY+L  
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV--------------------------- 464
           +M+ ++ +P+   Y++ +    K    ED  ++                           
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 465 --------FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
                   F+++     + D+ SY+ L+ GL +     EA E+F  M + GC L + ++N
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +I G C   KV+KA +L     + G   T  TY  ++ GL K+ R  +  ++  +   +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G  L+V  Y  LI    +  ++ +  L    +++ GL P+  T   LL  L    ++   
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-- 694
                 +       +   Y+ILI+GL K    ++A      M  +G+ P+  T+  ++  
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 695 ----GSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGNT 729
               G+ V  +    +F         ++ + + EGL N 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 153/669 (22%), Positives = 262/669 (39%), Gaps = 81/669 (12%)

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           +F+     Y  +I  L  + + + M  L Q M +  Y        +L+  F    RV+ A
Sbjct: 195 KFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAA 254

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-------------- 196
           + +L  M S   +  V ++NV +      K G  D  + +   +KA              
Sbjct: 255 LSLLDEMKSNSLEPDVVLYNVCIDCF--GKAGKVDMAWKFFHEMKANGLVLDDVTYTSMI 312

Query: 197 GIVPNVDTLNYLLEVLFE-----------------------TNRIESALDQFRRMHKKGC 233
           G++   D LN  +E LFE                         + E A     R  +KGC
Sbjct: 313 GVLCKADRLNEAVE-LFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P+  ++  ++  L    +VD+++    EM    I   LS Y  +I MLC+  KLE A+ 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALV 430

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           +   M+   L P+ +T   +++ LC+  RLDDA  I E +      P    +  ++ GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 354 EVGKFDESVNFLED---------------------KCGYVTSPH---------------- 376
             G+ DE+    E                      KCG     H                
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 377 --NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRM 433
             N  ++C   AG+    + + +++ +   I D  S+ I I  L +     +AYEL   M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                V D   Y+  + G CK      A ++  ++  +      ++Y  +++GL +++++
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            EA  +F      G  L+   ++ LI G   + ++D+A  +       G +    T+  +
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +  LVK +   + LV    M    C  +   Y ILI  + +  K     +F+  M K G 
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+  T  +++ GLA    +    +   K      V DS++YN +I GL      S A  
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 674 LLDLMLGKG 682
           L +    KG
Sbjct: 851 LFEEARLKG 859



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/549 (22%), Positives = 251/549 (45%), Gaps = 16/549 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I VL   + L+ A+++F+ +   K+    A  Y  MI+  G+AG  E+   L +   ++
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVP-CAYAYNTMIMGYGMAGKFEDAYSLLE---RQ 366

Query: 126 RYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           R      +++S   ++       +V+ A++    M       ++  +N+++  +   K G
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLC--KAG 423

Query: 183 FADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
             +   V ++ +K AG+ PNV T+N +++ L +  R++ A   F  +  K C P++ T+ 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I+GL  + RVD++  +  +M D         YT +I    +  + E+  +++  M  L
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              PD L     ++C+ +   ++    + +++  +G  P    +  ++ GL + G   E+
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 362 VNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRW 416
                   E  C   T  +N +++  C +GK   A  +LE+M  +       ++   I  
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           L + + + +AY L        +  +   YS+ + G  K+   ++A  +  ++  + L  +
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +++ L++ L + E+I+EA+  F  M    C+ +  +++ILI+GLC +RK +KA     
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G      TYT ++ GL K     +   +  +   +G   D   Y  +I+ +S  N
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843

Query: 597 KLKDCALFF 605
           +  D    F
Sbjct: 844 RASDAYRLF 852



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 189/475 (39%), Gaps = 69/475 (14%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREAL 134
           L  A  IF+ +   K  +  A TYC +I  LG  G V+E   L + M+   + PN     
Sbjct: 460 LDDACSIFEGLD-HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAV-VY 517

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            SL+ +F    R     ++                                    Y EM+
Sbjct: 518 TSLIRNFFKCGRKEDGHKI------------------------------------YNEML 541

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G  P++  LN  ++ +F+   IE     F+ +   G  P++R++ I+I GL+      
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++  +   M + G  L+   Y  +I   C+  K+ +A +L + M+     P  +TY  +I
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           + L +  RLD+A  + E+    G+     ++  ++ G  +VG+ DE+   +E        
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME-------- 713

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                                 E M      +  +WN  +  L + EEI +A      M 
Sbjct: 714 ----------------------ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+  TYS  + G CK+  +  A   ++++  Q    +  +Y+ ++ GL +   I 
Sbjct: 752 DLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIV 811

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           EA  +F    + G    S+ +N +I GL    +   A RL   A   G S  T T
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKT 866


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 221/489 (45%), Gaps = 13/489 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M+  G + ++   N+++     +++    F  V + + K G  PN  T + L+       
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRAL-KFGFEPNTITFSTLINGFCLEG 153

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+  A+    RM +    PN  T   +I GL    RV +++ ++  M   G +     Y 
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  +C+      A+ LF+ M    +    + Y  +I+ LC++  LDDA  +  +M + 
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA 392
           G+      +  I+ GLC  G++D+    L +  G    P+    +AL++     GK   A
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           K +  +M  R IA D  +++  I   C+   + +A ++L  MV     P+  TYS  +  
Sbjct: 334 KELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK    ++ +R+F ++S++ LV D+++Y+ LV+G CQ  K+  A E+F  M   G   S
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++ IL+ GLC   ++ KA+ +      S        Y  I+ G+    +  D   +  
Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFC 513

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            + V+G   DV  Y ++I  + ++  L +  + F  M + G  P   T   L+       
Sbjct: 514 SLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA----- 568

Query: 632 QLHLVSSGI 640
             HL  SG+
Sbjct: 569 --HLGGSGV 575



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/544 (22%), Positives = 242/544 (44%), Gaps = 22/544 (4%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +++ M+++  +P++   + L   +      +  L   + M   G   N  T  I+I    
Sbjct: 56  LFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFC 115

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              ++  + S++G     G +     ++ +I   C E ++ EA+ L   M  +   P+ +
Sbjct: 116 RKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVV 175

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
           T   LIN LC   R+ +A  +++ M+  G    +  +  ++  +C+ G    +++     
Sbjct: 176 TVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKM 235

Query: 366 -EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
            E         ++ +++  C  G    A  +  +M  + I AD  +++  I  LC +   
Sbjct: 236 EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRW 295

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
               ++L  M+  +++P+  T+SA +    K     +A  ++ ++ A+ +  D+I+YS L
Sbjct: 296 DDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSL 355

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G C+  ++ EA ++   M   GC  +  +++ILI   C  ++VD  +RL     S G 
Sbjct: 356 IDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 544 SYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
              T TY  ++ G     KL  AK+L     +M+  G    V  Y IL+  + +  +L+ 
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELF---QEMVSRGVPPSVVTYGILLDGLCDNGELQK 472

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F  M K+ ++        ++HG+ + S++    S    L       D   YN++I 
Sbjct: 473 ALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIG 532

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-----------EEIDSRRFAF 709
           GL K+G  S+A  L   M   G  P   T+ +L+ + +G           EE+  R FA 
Sbjct: 533 GLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAA 592

Query: 710 DSSS 713
           D+S+
Sbjct: 593 DAST 596



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 218/512 (42%), Gaps = 20/512 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           YKE ++ GIV                 ++  A+D F  M +    P+   F  +   +  
Sbjct: 37  YKERLRNGIVDI---------------KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVAR 81

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
               D  +    EM   GI+  +     +I   CR+ KL  A  +          P+ +T
Sbjct: 82  RKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTIT 141

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           +  LIN  C   R+ +A  +++ M+ +   P       ++ GLC  G+  E++  ++   
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
            Y        +  +L   C +G   LA  +  KM +R I A    ++I I  LC++  + 
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  L   M +  +  D   YS+ + G C    ++D  ++ R++  ++++ + +++S L+
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +   +  K+ EA E++  M   G +  + +++ LI G C   ++ +A ++  L  S G  
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY+ ++    K +R  + + +  ++  +G   D   Y  L+Q   +  KL      
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  MV  G+ P   T   LL GL D  +L        K+     +L   +YNI+I+G+  
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCN 501

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                 A  L   +  KG  PD  T+ +++G 
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGG 533



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 90/207 (43%), Gaps = 2/207 (0%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           + + +++F  +S +     T  TY  ++     +G +   + L Q MV    P       
Sbjct: 400 VDNGMRLFCEISSKGLVADTV-TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYG 458

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
            L+    ++  +  A+ +   M      L + ++N+++  +    +   D   ++  +  
Sbjct: 459 ILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK-VDDAWSLFCSLSV 517

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+V T N ++  L +   +  A   FR+M + GC P+  T+ I+I+  +  S V  
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVIS 577

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPML 282
           SV ++ EM   G   + S    ++ ML
Sbjct: 578 SVELIEEMKMRGFAADASTIKMVVVML 604


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 159/662 (24%), Positives = 290/662 (43%), Gaps = 57/662 (8%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME- 116
           R   S D ++ VL + +D   AL  FK V       HT +T   M+  L +   VE+M  
Sbjct: 86  RKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAF 145

Query: 117 --GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
              L Q  +  R  NV   LI     F+    +  A   L  M   GF L+   +N ++ 
Sbjct: 146 VFDLMQRQIIRR--NVDTYLIIFKSLFIRG-GLRQAPSALEKMREAGFVLNAYSYNGLIH 202

Query: 175 AIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            +++   GF  + + VY+ MV  G+ P++ T + L+    +   I++ +     M   G 
Sbjct: 203 FLLQS--GFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGL 260

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN  T+ I I+ L  + ++D++  I+  M D G   ++  YT +I  LC   KL++A+ 
Sbjct: 261 RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMC 320

Query: 294 LFKMMRALDLMPDELTYEEL-----------------------------------INCLC 318
           LF  M++    PD++TY  L                                   +N LC
Sbjct: 321 LFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALC 380

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
           +  R+++A D+L+ M   G+ P    +  ++ GL    + D++++   +       P   
Sbjct: 381 KAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAY 440

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRM 433
            +  L++    +G    A    EKM  R IA +  + N  +  L E   + +A  +   +
Sbjct: 441 TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL 500

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
             S + PD  TY+  +    K+   ++A+++  ++S      D I  + L++ L +  ++
Sbjct: 501 KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRV 560

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            EA ++FC M +   + +  ++NIL+ GL    ++ KA++L       G S  T T+  +
Sbjct: 561 EEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTL 620

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +  L K       L +  +M    C  DV  +  +I    +QN++K+    F+ M K  L
Sbjct: 621 LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-L 679

Query: 614 VPDRETMLSLLHGLADGSQL----HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            PD  T+ +LL G+    Q+     +      ++ S+   +D S +  ++ G+  E  T 
Sbjct: 680 RPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSN---IDRSFWEDVMGGILTEAGTE 736

Query: 670 QA 671
           +A
Sbjct: 737 KA 738



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/520 (22%), Positives = 235/520 (45%), Gaps = 14/520 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EM   G  P+V T   L+  L +  RI  A D    M K+G  PN  T+  +I GL+
Sbjct: 356 IWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLL 415

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             +R+DD++ +   M  LG++     Y  +I    +     +A+  F+ M+A  + P+ +
Sbjct: 416 RANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIV 475

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
                +  L E  RL +A  +  ++   GL P    +  +++   +VG+ DE++  L + 
Sbjct: 476 ACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEM 535

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEI 423
                 P     N+L++    AG+   A  +  +M +  +A    ++NI +  L +  +I
Sbjct: 536 SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQI 595

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           +KA +L   M      P+  T++  +   CK    + AL++F +++  +   D ++++ +
Sbjct: 596 QKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTI 655

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSG 542
           + G  +  +I  A+ +F  M K        +   L+ G+    +++ A R+     Y  G
Sbjct: 656 IHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVG 714

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
           ++   S +  +M G++  +   +  ++  + LV  C    +   +LI  +    K K  +
Sbjct: 715 SNIDRSFWEDVMGGILT-EAGTEKAILFGERLV--CRAICKDDSVLIPIIKVLCKHKKTS 771

Query: 603 LFFNVMVK----AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           +  NV VK     G+ P  +    L+ G  +   + +  +   ++ S     D+  YN L
Sbjct: 772 VARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSL 831

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
           I+   K G  ++   L D ML +G  P+  T+ +++ + V
Sbjct: 832 IDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 129/556 (23%), Positives = 237/556 (42%), Gaps = 44/556 (7%)

Query: 146  RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
            +V+ A+++L  M+    +  V V N ++  + +  R   +   ++  M +  + P V T 
Sbjct: 524  QVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR-VEEAWQMFCRMEEMNLAPTVVTY 582

Query: 206  NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
            N LL  L +  +I+ A+  F  M+  GC PN+ TF  ++  L  N  VD ++ +  +M  
Sbjct: 583  NILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTT 642

Query: 266  LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            +  + ++  +  II    ++N+++ AI LF  M+ L L PD +T   L+  + ++ +++D
Sbjct: 643  MNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIED 701

Query: 326  ANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSPHNALL--- 380
            A  I ED    +G       + D++ G+      ++++ F E   C  +    + L+   
Sbjct: 702  AFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPII 761

Query: 381  ECCCNAGKFFLAKCILEKMADR--KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
            +  C   K  +A+ +  K             +N+ I    E   +  A+ L   M  +  
Sbjct: 762  KVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821

Query: 439  VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
             PD  TY++                                   L++   +  KI E  +
Sbjct: 822  APDTFTYNS-----------------------------------LIDAHGKSGKINELFD 846

Query: 499  VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
            ++  M   GC  ++ ++N++I  L    ++DKA+ L     S   S T  T+  ++ GL+
Sbjct: 847  LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906

Query: 559  KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
            K  R  D   +   M+  GC  +   Y IL+    +   +     FF  MVK G+ PD +
Sbjct: 907  KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966

Query: 619  TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
            +   L+  L    ++        KL       D   YN++INGL +   T +A  L   M
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 679  LGKGWVPDATTHGLLV 694
              +G VPD  T+  L+
Sbjct: 1027 QNRGIVPDLYTYNSLI 1042



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 6/343 (1%)

Query: 178  EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
             +K   A  VFV K   + G+ P +   N L++   E + +E A + F  M   GC P++
Sbjct: 767  HKKTSVARNVFV-KFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDT 825

Query: 238  RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             T+  +I     + ++++   +  EM   G +     Y  +I  L + N+L++A+ L+  
Sbjct: 826  FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885

Query: 298  MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            + + D  P   T+  LI+ L ++ RLDDA+++ + M+  G  P   ++  +V G  ++G 
Sbjct: 886  LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945

Query: 358  FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
             D +  F +        P    +  L++  C AG+   A    EK+    +  D  ++N+
Sbjct: 946  VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005

Query: 413  PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
             I  L  ++   +A  L   M    +VPD  TY++ +L    +   E+A +++ ++    
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065

Query: 473  LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            L  +  +Y+ L+ G         A  ++  M   GC  ++ +F
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 127/580 (21%), Positives = 242/580 (41%), Gaps = 46/580 (7%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  M+      G V+E   L   M K +  P+V   + SL+ +     RV  A ++   
Sbjct: 511  TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVI-VINSLIDTLYKAGRVEEAWQMFCR 569

Query: 157  MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
            M       +V  +N++L  + +E +     V +++ M   G  PN  T N LL+ L + +
Sbjct: 570  MEEMNLAPTVVTYNILLAGLGKEGQ-IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKND 628

Query: 217  RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM------------- 263
             ++ AL  F +M    C P+  TF  +I G I  +++ +++ +  +M             
Sbjct: 629  EVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCT 688

Query: 264  ----------------------FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                                  + +G  ++ SF+  ++  +  E   E+AI   + +   
Sbjct: 689  LLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCR 748

Query: 302  DLMPDELTYEELINCLCENLRLDDANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKFDE 360
             +  D+     +I  LC++ +   A ++       +G+ PT  V+  ++ G  EV   + 
Sbjct: 749  AICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEV 808

Query: 361  SVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
            + N  E+     C   T  +N+L++    +GK      + ++M  R    +  ++N+ I 
Sbjct: 809  AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868

Query: 416  WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             L ++  + KA +L   +V     P   T+   + G  K    +DA  +F  +       
Sbjct: 869  NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRP 928

Query: 476  DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
            +S  Y+ LV G  ++  +  A E F  M K G      S+ IL+  LC+  +VD A+   
Sbjct: 929  NSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYF 988

Query: 536  SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 +G       Y  ++ GL + QR ++ L +  +M   G   D+  Y  LI ++   
Sbjct: 989  EKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIV 1048

Query: 596  NKLKDCALFFNVMVKAGLVPDRETMLSLLHG--LADGSQL 633
              +++    +  +   GL P+  T  +L+ G  L+  S+L
Sbjct: 1049 GMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSEL 1088



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/408 (21%), Positives = 171/408 (41%), Gaps = 32/408 (7%)

Query: 172  VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
            V+G I+ E  G    +   + +V   I  +   L  +++VL +  +   A + F +  K+
Sbjct: 725  VMGGILTEA-GTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783

Query: 232  -GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
             G  P  + + ++I G +    V+ + ++  EM   G   +   Y  +I    +  K+ E
Sbjct: 784  LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843

Query: 291  AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
               L+  M      P+ +TY  +I+ L ++ RLD A D+  +++    +PT   F  ++ 
Sbjct: 844  LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903

Query: 351  GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW 410
            GL + G+ D++    +    Y   P++A+                              +
Sbjct: 904  GLLKSGRLDDAHEMFDGMVHYGCRPNSAI------------------------------Y 933

Query: 411  NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
            NI +    +   +  A E   RMV   + PD  +Y+  V   C     +DAL  F ++  
Sbjct: 934  NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993

Query: 471  QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
              L  D ++Y+ ++ GL + ++  EA+ +F  M   G      ++N LI  L ++  +++
Sbjct: 994  AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE 1053

Query: 531  AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
            A ++       G      TY  ++ G      ++    +  +M+V GC
Sbjct: 1054 AGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGC 1101



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 105/520 (20%), Positives = 219/520 (42%), Gaps = 44/520 (8%)

Query: 146  RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
            ++  A+++  +MN  G   +   FN +L  + +           YK M      P+V T 
Sbjct: 594  QIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYK-MTTMNCRPDVLTF 652

Query: 206  NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF- 264
            N ++    + N+I++A+  F +M KK   P+  T   ++ G+I + +++D+  I  + F 
Sbjct: 653  NTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFY 711

Query: 265  DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             +G  ++ SF+  ++  +  E   E+AI   + +    +  D+     +I  LC++ +  
Sbjct: 712  QVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTS 771

Query: 325  DANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNAL 379
             A ++       +G+ PT  V+  ++ G  EV   + + N  E+     C   T  +N+L
Sbjct: 772  VARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSL 831

Query: 380  LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA------------ 426
            ++    +GK      + ++M  R    +  ++N+ I  L ++  + KA            
Sbjct: 832  IDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF 891

Query: 427  -----------------------YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                                   +E+   MV     P+ A Y+  V G  KL + + A  
Sbjct: 892  SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACE 951

Query: 464  VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
             F+++  + +  D  SY+ LV+ LC   ++ +A+  F  + + G      ++N++I GL 
Sbjct: 952  FFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLG 1011

Query: 524  VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              ++ ++A+ L     + G      TY  ++L L  +   ++   +  ++   G   +V 
Sbjct: 1012 RSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVF 1071

Query: 584  AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
             Y  LI+  +     +     +  M+  G  P+  T   L
Sbjct: 1072 TYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 13/279 (4%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATY-----SAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
           E++   ++L+ R ++   V    TY     S F+ G  +      A     ++     VL
Sbjct: 141 EDMAFVFDLMQRQIIRRNVD---TYLIIFKSLFIRGGLR-----QAPSALEKMREAGFVL 192

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           ++ SY+ L+  L Q     EA+EV+  M   G   S  +F+ L+      R +   + L 
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               S G      TYT  +  L +  +  +   ++ +M  +GC  DV  Y +LI ++   
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            KL D    F  M  +   PD+ T ++LL   +D   L  V     ++ +D    D   +
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            IL+N L K G  ++A  LLD M  +G +P+  T+  L+
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLI 411



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 126/309 (40%), Gaps = 36/309 (11%)

Query: 387 GKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G    A   LEKM +   + +  S+N  I +L ++   ++A E+  RMV   + P   T+
Sbjct: 173 GGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTF 232

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           SA ++   K  N +  + +  ++ +  L  +  +Y+  +  L +  KI EA  +   M  
Sbjct: 233 SALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDD 292

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           +GC     ++ +LI  LC  RK+D A+ L +   SS       TY  ++           
Sbjct: 293 DGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDK 352

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           +  +  +M  +G A DV  + IL+ ++ +  ++ +     + M K G++P+  T      
Sbjct: 353 VEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHT------ 406

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                                        YN LI+GL +      A  L   M   G  P
Sbjct: 407 -----------------------------YNTLISGLLRANRLDDALDLFSNMESLGVEP 437

Query: 686 DATTHGLLV 694
            A T+ LL+
Sbjct: 438 TAYTYILLI 446



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 3/252 (1%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            TY  +I  L  +  +++   L  N+V   +         L+   +   R++ A  +   M
Sbjct: 862  TYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGM 921

Query: 158  NSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
               G + +  ++N+++      K G  D     +K MVK GI P++ +   L+++L    
Sbjct: 922  VHYGCRPNSAIYNILVNGY--GKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAG 979

Query: 217  RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            R++ AL  F ++ + G  P+   + ++I GL  + R ++++S+  EM + GI  +L  Y 
Sbjct: 980  RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039

Query: 277  CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             +I  L     +EEA ++++ ++ + L P+  TY  LI     +   + A  I + M+V 
Sbjct: 1040 SLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVG 1099

Query: 337  GLTPTDDVFVDI 348
            G  P    F  +
Sbjct: 1100 GCDPNTGTFAQL 1111


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 158/759 (20%), Positives = 305/759 (40%), Gaps = 81/759 (10%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           E ++  L  N +P+ +I VL    D+++A+  F+W        H  + Y  +++ +    
Sbjct: 85  ENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTR 144

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
               +E + + M    +       I +V SF+   ++  A   +  M    F+ +   + 
Sbjct: 145 KFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYT 204

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            ++GA+    R     + ++++M + G   NV     L+ V     R+++AL     M  
Sbjct: 205 NLIGAL-STSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS 263

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
               P+   + + I       +VD +     EM   G+ L+   YT +I +LC+ ++L E
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+ LF+ M     +P    Y  +I       + +DA  +LE     G  P+   +  I+ 
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383

Query: 351 GLCEVGKFDESVN-FLEDKCGYVT--SPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
            L   G+ DE++  F E K   +   S +N +++  C AGK   A  + + M D  +  +
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 407 CDSWNIPIRWLCENEE-----------------------------------IRKAYELLG 431
             + NI +  LC+ +                                    + +AY+L  
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV--------------------------- 464
           +M+ ++ +P+   Y++ +    K    ED  ++                           
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 465 --------FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
                   F+++     + D+ SY+ L+ GL +     EA E+F  M + GC L + ++N
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +I G C   KV+KA +L     + G   T  TY  ++ GL K+ R  +  ++  +   +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G  L+V  Y  LI    +  ++ +  L    +++ GL P+  T   LL  L    ++   
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-- 694
                 +       +   Y+ILI+GL K    ++A      M  +G+ P+  T+  ++  
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 695 ----GSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGNT 729
               G+ V  +    +F         ++ + + EGL N 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 151/668 (22%), Positives = 264/668 (39%), Gaps = 79/668 (11%)

Query: 91  RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           +F+     Y  +I  L  + + + M  L Q M +  Y        +L+  F    RV+ A
Sbjct: 195 KFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAA 254

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + +L  M S   +  V ++NV +      K G  D  +  + EM   G+V +  T   ++
Sbjct: 255 LSLLDEMKSNSLEPDVVLYNVCIDCF--GKAGKVDMAWKXFHEMKANGLVLDDVTYTSMI 312

Query: 210 EVLFETNRIESALDQFR-----------------------------------RMHKKGCC 234
            VL + +R+  A++ F                                    R  +KGC 
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCI 372

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+  ++  ++  L    +VD+++    EM    I   LS Y  +I MLC+  KLE A+ +
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVV 431

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M+   L P+ +T   +++ LC+  RLDDA  I E +      P    +  ++ GL  
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 355 VGKFDESVNFLED---------------------KCGYVTSPH----------------- 376
            G+ DE+    E                      KCG     H                 
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 377 -NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N  ++C   AG+    + + +++ +   I D  S+ I I  L +     +AYEL   M 
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
               V D   Y+  + G CK      A ++  ++  +      ++Y  +++GL +++++ 
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA  +F      G  L+   ++ LI G   + ++D+A  +       G +    T+  ++
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
             LVK +   + LV    M    C  +   Y ILI  + +  K     +F+  M K G  
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P+  T  +++ GLA    +    +   K      V DS++YN +I GL      S A  L
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851

Query: 675 LDLMLGKG 682
            +    KG
Sbjct: 852 FEEARLKG 859



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/549 (22%), Positives = 251/549 (45%), Gaps = 16/549 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I VL   + L+ A+++F+ +   K+    A  Y  MI+  G+AG  E+   L +   ++
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVP-CAYAYNTMIMGYGMAGKFEDAYSLLE---RQ 366

Query: 126 RYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           R      +++S   ++       +V+ A++    M       ++  +N+++  +   K G
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLC--KAG 423

Query: 183 FADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
             +   V ++ +K AG+ PNV T+N +++ L +  R++ A   F  +  K C P++ T+ 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I+GL  + RVD++  +  +M D         YT +I    +  + E+  +++  M  L
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              PD L     ++C+ +   ++    + +++  +G  P    +  ++ GL + G   E+
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 362 VNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRW 416
                   E  C   T  +N +++  C +GK   A  +LE+M  +       ++   I  
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           L + + + +AY L        +  +   YS+ + G  K+   ++A  +  ++  + L  +
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +++ L++ L + E+I+EA+  F  M    C+ +  +++ILI+GLC +RK +KA     
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G      TYT ++ GL K     +   +  +   +G   D   Y  +I+ +S  N
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843

Query: 597 KLKDCALFF 605
           +  D    F
Sbjct: 844 RASDAYRLF 852



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 189/475 (39%), Gaps = 69/475 (14%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREAL 134
           L  A  IF+ +   K  +  A TYC +I  LG  G V+E   L + M+   + PN     
Sbjct: 460 LDDACSIFEGLD-HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAV-VY 517

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            SL+ +F    R     ++                                    Y EM+
Sbjct: 518 TSLIRNFFKCGRKEDGHKI------------------------------------YNEML 541

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G  P++  LN  ++ +F+   IE     F+ +   G  P++R++ I+I GL+      
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++  +   M + G  L+   Y  +I   C+  K+ +A +L + M+     P  +TY  +I
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           + L +  RLD+A  + E+    G+     ++  ++ G  +VG+ DE+   +E        
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME-------- 713

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                                 E M      +  +WN  +  L + EEI +A      M 
Sbjct: 714 ----------------------ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+  TYS  + G CK+  +  A   ++++  Q    +  +Y+ ++ GL +   I 
Sbjct: 752 DLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIV 811

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           EA  +F    + G    S+ +N +I GL    +   A RL   A   G S  T T
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKT 866


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 238/509 (46%), Gaps = 40/509 (7%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           K+M   GI  N+ TLN ++       +   A     ++ K G  P++ TF  +I GL   
Sbjct: 89  KKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 148

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           S+V ++V ++  M + G Q  +  Y  I+  +C+      A+ L + M   ++  D  TY
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +I+ LC +  +D A  + ++M   G+  +   +  +V GLC+ GK+++ V  L+D   
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268

Query: 371 YVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P+    N L++     GK   A  + ++M  + I+ +  ++N  +   C    + +
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +L  MV ++  PD  T+++ + G CK+   ++ +++FR++S + LV ++++YS LV+
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G CQ  K+  A E+F  M   G      ++ IL+ GLC   K++KA+ +           
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEI----------- 437

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
                         LQ++K               LD+  Y I+I+ M +  K++D    F
Sbjct: 438 -----------FEDLQKSK-------------MNLDIVMYTIIIEGMCKGGKVEDAWNLF 473

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             +   G+ P+  T   ++ GL     L   +  + K+  D    +   YN LI    ++
Sbjct: 474 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRD 533

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G  + ++ L++ M   G+  DA++  +++
Sbjct: 534 GDLTASAKLIEEMKSCGFSADASSIKMVI 562



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 197/410 (48%), Gaps = 6/410 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  VL  +   G++     FN ++  +  E +  ++ V +   MV+ G  PNV T N ++
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESK-VSEAVVLVARMVENGCQPNVVTYNSIV 177

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             + ++     ALD  R+M ++    +  T+  +I  L  +  +D ++S+  EM   GI+
Sbjct: 178 NGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 237

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             L  Y  ++  LC+  K  + ++L K M +  ++P+ +T+  LI+   +  +L +AN++
Sbjct: 238 SSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANEL 297

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCN 385
            ++MI  G++P    +  ++ G C   +  E+ N L+    + C        +L++  C 
Sbjct: 298 YKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCK 357

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             +      +  K++ R  +A+  +++I ++  C++ ++  A EL   MV   V+PD  T
Sbjct: 358 VKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMT 417

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y   + G C     E AL +F  +    + LD + Y+ ++EG+C+  K+ +A  +FC + 
Sbjct: 418 YGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLP 477

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
             G   +  ++ ++I GLC    + +A  L       G      TY  ++
Sbjct: 478 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 203/452 (44%), Gaps = 5/452 (1%)

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           I + + DD++ +  EM        L  ++     +    +    +   K M    +  + 
Sbjct: 41  IVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNI 100

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----N 363
            T   +INC C   +   A  +L  ++ +G  P    F  ++ GLC   K  E+V     
Sbjct: 101 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVAR 160

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
            +E+ C      +N+++   C +G   LA  +L KM +R + AD  +++  I  LC +  
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC 220

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I  A  L   M    +     TY++ V G CK   + D +++ + ++++ ++ + I+++ 
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++   +  K+ EA E++  M   G S ++ ++N L+ G C+  ++ +A  +  L   + 
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            S    T+T ++ G  K++R  + + +  ++   G   +   Y IL+Q   +  KL+   
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  MV  G++PD  T   LL GL D  +L         L      LD  MY I+I G+
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K G    A  L   +  KG  P+  T+ +++
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 492


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 167/671 (24%), Positives = 276/671 (41%), Gaps = 117/671 (17%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY-KEMVK 195
           L+ ++V   +V  A   +  M+  GFK S    N +L A+VEE  G + +V+++ +E + 
Sbjct: 91  LIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEE--GESKYVWLFLRESLA 148

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVD 254
                +V T N LL  L        A D  ++M  K CC  NS T+  ++   +   R  
Sbjct: 149 RKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KSCCLSNSATYNTILHWYVKKGRFK 206

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ +L +M    IQ ++  Y  +I  LCR  +   A  L K MR  DL PDE TY  LI
Sbjct: 207 AALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLI 266

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CGYV 372
           N      +++ A  +   M+   L P+   +  ++ G C   + D++++ L +    G +
Sbjct: 267 NGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVM 326

Query: 373 TS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW-NIPIRWLCENEEIRKAYEL 429
            S   ++ALL   C       A  ++  +  R I    +   I I   C+  EI KA ++
Sbjct: 327 PSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQI 386

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKL-----------------------------CNY-- 458
           L  M+   + PD  TYSA + G C++                             C Y  
Sbjct: 387 LKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCK 446

Query: 459 ----EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               + AL+ F  +  + LV + + ++ L+    +   ITEA      MS+   S +S S
Sbjct: 447 AGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVS 506

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVL- 570
           FN +I   C   K+ +A  +       G S    TY  ++ GL +   L +AK  +  L 
Sbjct: 507 FNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLL 566

Query: 571 -------------------------------AQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                                           +M+   C  D+  Y IL+     + K+ 
Sbjct: 567 DIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKIL 626

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS---------------------- 637
              +   +M++ G+VPD      LL+GL +  Q+   S                      
Sbjct: 627 PALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSL 686

Query: 638 ----------SGINKLVSD---SEVL-DSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
                     + I +++SD   +EV  +S+ YNIL++G  K G  S++ YL   M+ KG 
Sbjct: 687 MNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI 746

Query: 684 VPDATTHGLLV 694
            PD  T+ LL+
Sbjct: 747 RPDNVTYRLLI 757



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 137/635 (21%), Positives = 256/635 (40%), Gaps = 77/635 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++  +V   R   A+ VL +M     +  +  +N+++  +   KR    F+ + K M K
Sbjct: 194 TILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLL-KRMRK 252

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + P+  T N L+   F   +I  A   F  M ++   P+  T+  +I G   N R+D 
Sbjct: 253 DDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDK 312

Query: 256 SVSILGEM----------------------------FDL-------GIQLELSFYTCIIP 280
           ++S+L EM                             DL       GI +  +  T +I 
Sbjct: 313 ALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILID 372

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C+  ++ +A ++ K M    + PD +TY  LIN +C   ++ +  +IL  M   G+ P
Sbjct: 373 GFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILP 432

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFLAKCIL 396
            D ++  ++   C+ G    ++    D  + G V +P  HNALL      G    A+   
Sbjct: 433 NDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFR 492

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           + M+   I+ +  S+N  I   C   +I +A+ +   MV     P+  TY   + G C+ 
Sbjct: 493 QYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQG 552

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            +   A +    +      +D  +++ L+ G+C+   + EA+++   M KN C     ++
Sbjct: 553 GHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTY 612

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            IL+ G C   K+  A+ +  +    G    T  YT ++ GL+   + K    V  +++ 
Sbjct: 613 TILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIIC 672

Query: 576 -EGCALDVEAYC-----------------------------------ILIQSMSEQNKLK 599
            EG   D  AY                                    IL+    ++ +  
Sbjct: 673 KEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFS 732

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                +  MV+ G+ PD  T   L+ GL++   + +    + K+V +    D  +++ILI
Sbjct: 733 KSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILI 792

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               ++     A  L + M      P + T   ++
Sbjct: 793 TSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMI 827



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 123/548 (22%), Positives = 241/548 (43%), Gaps = 19/548 (3%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVD 203
           A+ ++V++ S G  ++  +  +++      G I + K+       + K M++ GI P+V 
Sbjct: 348 ALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQ-------ILKSMLEDGIDPDVV 400

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T + L+  +    ++    +   RM K G  PN   +  +I        V  ++    ++
Sbjct: 401 TYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDI 460

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
           +  G+      +  ++    RE  + EA    + M  +++  + +++  +I+  C   ++
Sbjct: 461 YRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKI 520

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNAL 379
            +A  + +DM+  G +P    + +++RGLC+ G   ++  F    L+          NAL
Sbjct: 521 VEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNAL 580

Query: 380 LECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           L   C  G    A  I EKM     + D  ++ I +   C   +I  A  +L  M+   V
Sbjct: 581 LLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGV 640

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           VPD   Y+  + G       + A  VF+++   + L  D I+Y+ L+ G  +   +    
Sbjct: 641 VPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIK 700

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +   M +N    +S+S+NIL++G     +  K++ L       G      TY  ++LGL
Sbjct: 701 RMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 760

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            +       +  L +M++EG   D   + ILI S SE++K+ +    FN M    L P  
Sbjct: 761 SECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSS 820

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           +T  ++++GL   + L      +++++      + + Y  L+N   + G   +A  L + 
Sbjct: 821 KTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 880

Query: 678 MLGKGWVP 685
           M   G VP
Sbjct: 881 MKAIGIVP 888



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 124/589 (21%), Positives = 230/589 (39%), Gaps = 86/589 (14%)

Query: 189  VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            +   M K+GI+PN      L+    +   ++ AL  F  ++++G   N      +++   
Sbjct: 421  ILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFY 480

Query: 249  ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                + ++      M  + I      + CII   C   K+ EA  ++  M      P+  
Sbjct: 481  REGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVC 540

Query: 309  TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-- 366
            TY+ L+  LC+   L  A   +  ++ I     +  F  ++ G+C+ G  DE+++  E  
Sbjct: 541  TYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKM 600

Query: 367  --DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-------------------- 404
              + C      +  LL   C  GK   A  +L+ M ++ +                    
Sbjct: 601  VKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQV 660

Query: 405  -----------------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                             ADC ++N  +    +   +     ++  M  + V P+ A+Y+ 
Sbjct: 661  KAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNI 720

Query: 448  FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
             + G  K   +  +L +++ +  + +  D+++Y  L+ GL +   I  AV+    M   G
Sbjct: 721  LMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEG 780

Query: 508  CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                   F+ILI       K+  A+RL +       S ++ T++ ++ GL++        
Sbjct: 781  IFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSH 840

Query: 568  VVLAQMLVEGCALDVEAYCIL-----------------------------------IQSM 592
             VL +ML  G   +   Y  L                                   I+ +
Sbjct: 841  EVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGL 900

Query: 593  SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSE 648
                KL++  + F+ M+++G+VP   T  +L+H L   S+    LHL      +L+    
Sbjct: 901  CRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL-----KRLMELCR 955

Query: 649  V-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            + +D   YN+LI GL K+   S A  L   M  KG  P+ TT+  L G+
Sbjct: 956  LKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGA 1004



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/459 (22%), Positives = 202/459 (44%), Gaps = 32/459 (6%)

Query: 191  KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            ++MVK   +P++ T   LL       +I  AL   + M +KG  P++  +  ++ GLI  
Sbjct: 598  EKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINE 657

Query: 251  SRVDDSVSILGEMF-DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             +V  +  +  E+    G+  +   Y  ++    +   +    R+   M   ++ P+  +
Sbjct: 658  GQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSAS 717

Query: 310  YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--- 366
            Y  L++   +  +   +  + + M+  G+ P +  +  ++ GL E G  D +V FLE   
Sbjct: 718  YNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMV 777

Query: 367  ------DKCGY---VTS------PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
                  DK  +   +TS       HNAL         F   KC+    + +      +++
Sbjct: 778  LEGIFPDKLVFDILITSFSEKSKMHNAL-------RLFNCMKCLHLSPSSK------TFS 824

Query: 412  IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
              I  L     + +++E+L  M+   + P+   Y A V  KC++   + A R+  ++ A 
Sbjct: 825  AMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAI 884

Query: 472  SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
             +V   ++ S ++ GLC+  K+ EAV VF  M ++G   + ++F  L++ LC   K+  A
Sbjct: 885  GIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADA 944

Query: 532  IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
            + L+ L           +Y  ++ GL K +   D L +  +M  +G   +V  Y  L  +
Sbjct: 945  LHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGA 1004

Query: 592  MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            M    ++++       + + GL+P  + + +L   + D 
Sbjct: 1005 MYSTGRMQNGEELLEDIEERGLIPAFKQLENLERRMEDA 1043



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 170/382 (44%), Gaps = 35/382 (9%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK- 124
           L+  L N   + +A  +F+ +  ++        Y  ++      GNV  ++ +  +M + 
Sbjct: 650 LLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQN 709

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           E YPN     I L+  +V   + + ++ +   M   G +     + +++  + E   G  
Sbjct: 710 EVYPNSASYNI-LMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC--GLI 766

Query: 185 DFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           D    + E MV  GI P+    + L+    E +++ +AL  F  M      P+S+TF  +
Sbjct: 767 DIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAM 826

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I GLI  + +D S  +L EM  +G+Q   + Y  ++   CR  +++ A RL + M+A+ +
Sbjct: 827 INGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI 886

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +P E+    +I  LC   +L++A  +  +M+  G+ PT   F  ++  LC+  K  ++++
Sbjct: 887 VPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALH 946

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
                          L+E C                  R   D  S+N+ I  LC+++ I
Sbjct: 947 L------------KRLMELC------------------RLKVDVVSYNVLITGLCKDKHI 976

Query: 424 RKAYELLGRMVVSSVVPDCATY 445
             A +L G M    + P+  TY
Sbjct: 977 SDALDLYGEMKSKGLWPNVTTY 998



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 177/444 (39%), Gaps = 33/444 (7%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N   FE++IK  +   +V D+   +  M D G +        I+  L  E + +      
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFL 143

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           +   A     D  T   L+N LC N     A D+L+ M                      
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM---------------------- 181

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
                     +  C   ++ +N +L      G+F  A C+LE M    I AD  ++NI I
Sbjct: 182 ----------KSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMI 231

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC  +   +A+ LL RM    + PD  TY+  + G         A  VF  +  Q+LV
Sbjct: 232 DKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLV 291

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
               +Y+ +++G C+  +I +A+ V   M   G   S  +++ L+ G C +  +  A+ L
Sbjct: 292 PSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDL 351

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                S G +   +  T ++ G  ++        +L  ML +G   DV  Y  LI  M  
Sbjct: 352 MVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCR 411

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             K+ +     + M K+G++P+     +L+        + +       +     V +  +
Sbjct: 412 MAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVI 471

Query: 655 YNILINGLWKEGLTSQASYLLDLM 678
           +N L+   ++EG+ ++A +    M
Sbjct: 472 HNALLRAFYREGMITEAEHFRQYM 495



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 190/417 (45%), Gaps = 9/417 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T+  ++L +   G ++E   +C+ MVK    P++    I L+  F    ++  A+ +L  
Sbjct: 576 TFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTI-LLSGFCRKGKILPALVMLQM 634

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDTLNYLLEVLFET 215
           M   G       +  +L  ++ E +  A   +V++E++ K G+  +    N L+    + 
Sbjct: 635 MLEKGVVPDTVAYTCLLNGLINEGQVKAA-SYVFQEIICKEGLYADCIAYNSLMNGYLKG 693

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             + +       M++    PNS ++ I++ G +   +   S+ +   M   GI+ +   Y
Sbjct: 694 GNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 753

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I  L     ++ A++  + M    + PD+L ++ LI    E  ++ +A  +   M  
Sbjct: 754 RLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKC 813

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFL 391
           + L+P+   F  ++ GL      D+S   L +       P++    AL+   C  G+   
Sbjct: 814 LHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDR 873

Query: 392 AKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  + E+M    I   + + +  IR LC   ++ +A  +   M+ S +VP  AT++  + 
Sbjct: 874 AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMH 933

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
             CK     DAL + R +    L +D +SY+ L+ GLC+ + I++A++++  M   G
Sbjct: 934 SLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKG 990


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/583 (23%), Positives = 240/583 (41%), Gaps = 80/583 (13%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y  MV  G+VP+  +   LL           AL  F  M  KGC  +++ +++VI+  + 
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
                D+V +  EM   G++ +   Y   I  LC+    + A+++   MR     P ELT
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 310 YEELINCLC------ENLRLDD------------------------------ANDILEDM 333
           Y  +++ L       E LRL D                              A D+ +++
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKF 389
           +  G+TPT+  +  +++G    G  DE+       +E      T   N +++      ++
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A  +LE + D  + D  ++   I WLC+++++ +A  L  +M  + V P   TY + +
Sbjct: 378 KDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
           LG C+    ++AL+++ ++  +    + ++Y+ L++G  + +    A  +   M +NG S
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++NILI GL ++ +V +   +     S G   TT TY  I+ G VK         +
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 570 LAQMLVEG--------------------CAL---------------DVEAYCILIQSMSE 594
             QM  +G                    C L               D+ AY   I +  +
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           Q  +     F  +++K GL PD     S + G  +   +   S     ++    V D+ +
Sbjct: 618 QGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEI 677

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGL 692
           Y  LI+G  K G  + A  L   M+    +PD     A THGL
Sbjct: 678 YTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGL 720



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 221/509 (43%), Gaps = 39/509 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ E+V  G+ P   T   L++        +      R+M ++G   ++  F +VIKGL+
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLL 372

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + R  D++ +L  + D G+  ++  Y C+I  LC+  KL EA+ L+  M+   + P  +
Sbjct: 373 RDKRWKDAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  L+   CE  R+D+A  +  +M   G  P +  +  +++G  +   FD +   L   
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALL--- 488

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                   N + +   + G +                   ++NI I  L     + +  E
Sbjct: 489 --------NEMRQNGVSCGDY-------------------TYNILINGLYMVNRVCEVDE 521

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +L R +    VP   TY++ + G  K      A  ++RQ+  + +  + ++Y+  ++G C
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +      AV++   + ++G     +++N  I   C    + +A+    L    G +   +
Sbjct: 582 RTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVT 641

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y   + G   L+   +       M+ +    D E Y  LI   S+   +      ++ M
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS----MYNILINGLWK 664
           +   ++PD +T  +L HGL     +     G  +L+ D   LD S     YN+LIN   +
Sbjct: 702 MANHVIPDDKTFTALTHGLCRSGDI----DGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           +G   +A  L D ML  G VPD TT+ +L
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/436 (22%), Positives = 191/436 (43%), Gaps = 7/436 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G  LS   FN+V+  ++ +KR + D + + + +V  G VP+V T   L+  L +  ++  
Sbjct: 356 GLLLSTYEFNLVIKGLLRDKR-WKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHE 413

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A++ + +M + G  P+  T+  ++ G     R+D+++ +  EM D G       YT ++ 
Sbjct: 414 AVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMK 473

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
              ++   + A  L   MR   +   + TY  LIN L    R+ + +++L+  +  G  P
Sbjct: 474 GYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA-KCI 395
           T   +  I+ G  + G    +            +P    + + ++  C      LA K +
Sbjct: 534 TTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 593

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +    D    D  ++N  I   C+   + +A   L  ++   + PD   Y++FV G   L
Sbjct: 594 IYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNL 653

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               +A + +  +  Q +V D+  Y+ L++G  +V  +  A+E++  M  N       +F
Sbjct: 654 KMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTF 713

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             L +GLC    +D A RL         S    TY  ++   V+  + ++   +  +ML 
Sbjct: 714 TALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLS 773

Query: 576 EGCALDVEAYCILIQS 591
            G   D   Y IL ++
Sbjct: 774 SGVVPDDTTYDILPRT 789


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 151/652 (23%), Positives = 276/652 (42%), Gaps = 56/652 (8%)

Query: 52  AKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           ++++ L   L   H+  ++    D  S ++ F W+S +  ++H  + +  M+ +L     
Sbjct: 64  SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRL----- 118

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
                      V++R           VF+  +H R+   + +    N             
Sbjct: 119 -----------VRDR-----------VFAPADHIRI---LMIKACRNE------------ 141

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
                 EE R  ADF+    E+   G   ++ + N LL  L +   +E A + +++M   
Sbjct: 142 ------EEIRRVADFL---NEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+  TF  +I  L    +V ++  IL ++F   +  ++  YT +I   CR   L+ A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             +F  M      P+ +TY  LIN LC   R+D+A D+LE+MI  G+ PT   +   +  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 352 LCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IAD 406
           LC +   +E++  +    +  C      + AL+      GK  +A  +  KM     + +
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I  LC       A ++   M     + +  TY+  + G C   + E A+ +F 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++     +   ++Y+ L+ G      +  A  +   M +NGC     ++N L+ G     
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K++ A          G +    +YT ++ G  K  +    L +L +M   GC  +VE+Y 
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            +I  +S++N+  +     + MV+ GL+P+  T  +L+ GL    +        + +   
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
             + +   Y+ LI GL +EG   +A  LL  M  KG  PD  T   L+   V
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 664



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 2/286 (0%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
            S+ALKIF W+       +T  TY ++I  L L G++E+   L + M+K           
Sbjct: 389 FSTALKIFHWMEGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  ++    VN A R+L  M   G +     +N ++    +  +      F ++EMV+
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK-LESASFYFQEMVE 506

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PN  +   L++   +  +++ AL   +RM + GC PN  ++  VI GL   +R  +
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  I  +M + G+   +  YT +I  LCR  + + A ++F  M     +P+  TY  LI 
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            LC+  + D+A  +L++M   GL P +  F  ++ G   +G+ D +
Sbjct: 627 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 672



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 144/303 (47%), Gaps = 1/303 (0%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  L +  ++R+A  +L ++    + PD  TY++ +LG C+  N + A  VF ++
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    +S++YS L+ GLC   ++ EA+++   M + G   +  ++ + I  LC +   
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++AI L +     G      TYT ++ GL +L + +  + +  +ML EG   +   Y  L
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  +    +       F+ M   G + + +T   ++ GL  G  +        K++    
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRF 707
           +     YN LING   +G  + A+ LLDLM   G  PD  T+  LV G S   +++S  F
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 708 AFD 710
            F 
Sbjct: 500 YFQ 502


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 213/457 (46%), Gaps = 6/457 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +  + K  ++  V +   +   GI P++ TLN L+       +I        ++
Sbjct: 62  FNKILDSFAKMKH-YSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P++ T   +IKGL    +V  ++    ++   G QL    Y  +I  +C+    
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDT 180

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI+L + +      P+ + Y  +I+ LC+   + +A  +  +M V G++     +  +
Sbjct: 181 RAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C  GK  E++  L +      +P    +N L++  C  GK   AK +L  M    +
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  +       E++KA  +   M +  V PD  TY+  + G CK    ++AL 
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALN 360

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F+++  +++V   ++YS L++GLC+  +I    ++   M   G   +  +++ LI GLC
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLC 420

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               +D+AI L +     G    T T+T ++ GL K  R KD   V   +L +G  L+V 
Sbjct: 421 KNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            Y ++I    +Q  L++     + M   G +PD  T 
Sbjct: 481 TYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/498 (23%), Positives = 215/498 (43%), Gaps = 5/498 (1%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A+ QF RM      P    F  ++           +VS+   +   GIQ +L     
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C   ++     +   +      PD +T   LI  LC   ++  A    + ++  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
                  +  ++ G+C++G    ++  L+   G +T P    ++ +++  C       A 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +  +M  + I AD  +++  I   C   ++++A  LL  MV+ ++ P+  TY+  V   
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK    ++A  V   +    +  D I+YS L++G   V ++ +A  VF  MS  G +   
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++ ILI G C  + VD+A+ L    +         TY+ ++ GL K  R   +  ++ +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   +V  Y  LI  + +   L      FN M   G+ P+  T   LL GL  G +
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L         L++    L+   YN++I+G  K+GL  +A  +L  M   G +PDA T  +
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEI 519

Query: 693 LVGSSVGEEIDSRRFAFD 710
           ++ +   ++ +     FD
Sbjct: 520 IIIALFKKDENGGNVGFD 537



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 7/243 (2%)

Query: 377  NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
            N L+ C C+ G+      IL K+  R    D  ++   I  LC   ++ KA     +++ 
Sbjct: 965  NILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLA 1024

Query: 436  SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                 +  +Y   + G CK+ +   A+++ R++  +    D + Y+ +++ LC+ + +++
Sbjct: 1025 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSK 1084

Query: 496  AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
            A  +F  M+  G S    ++N LIYG C++ K+ +AI L +       +    TY  ++ 
Sbjct: 1085 AYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVD 1144

Query: 556  GLVKLQRAKDL----LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
             L K    KDL    L +L++M   GC  +   + I+I ++ E+++        + M+  
Sbjct: 1145 ALCK--EGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIAR 1202

Query: 612  GLV 614
            GL+
Sbjct: 1203 GLL 1205



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 7/250 (2%)

Query: 197  GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            GI P++ TLN L+       +I        ++ K+G  P++ TF  +I GL    +V+ +
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 257  VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
            +    ++   G QL    Y  +I  +C+      AI+L + +      PD + Y  +I+ 
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 317  LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
            LC++  +  A  +  +M V G++     +  ++ G C VGK  E++  L        +P 
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 376  ---HNALLECCCNAGKFFLAKCI--LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
               +N L++  C  GK  L + +  L KM D    A+  ++ I I  L E +E  K  +L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 430  LGRMVVSSVV 439
            L  M+   ++
Sbjct: 1196 LHEMIARGLL 1205



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 131/302 (43%), Gaps = 1/302 (0%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + +  A     RM+     P    ++  +    K+ +Y  A+ +  ++  + +  D I+ 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+   C + +IT    V   + K G    + + N LI GLC+  +V KA+       +
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G      +Y  ++ G+ K+   +  + +L ++       +V  Y  +I ++ +   + +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M   G+  D  T  +L++G     +L      +N++V  +   +   YNIL++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSFPDSVS 719
            L KEG   +A  +L +ML     PD  T+  L+ G  +  E+   +  F++ S      
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 720 DI 721
           D+
Sbjct: 338 DV 339



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           Y V  A  V   M+  G    V  + +++    + K    + + ++KEM +  +VP + T
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM-VDEALNLFKEMHQKNMVPGIVT 376

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            + L++ L ++ RI    D    MH +G   N  T+  +I GL  N  +D ++++  +M 
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           D GI+     +T ++  LC+  +L++A  +F+ +       +  TY  +I+  C+   L+
Sbjct: 437 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLE 496

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           +A  +L  M   G  P    F  I+  L +  +   +V F
Sbjct: 497 EALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGF 536



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 8/228 (3%)

Query: 371  YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
            Y+  PHN +         +  A  +  ++  + I  D  + NI I   C   +I   + +
Sbjct: 931  YIRIPHNPMKH-------YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSI 983

Query: 430  LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
            L +++     PD  T++  + G C       AL    ++ AQ   L+ +SY  L+ G+C+
Sbjct: 984  LAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCK 1043

Query: 490  VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
            +     A+++   +           +N +I  LC  + V KA  L       G S    T
Sbjct: 1044 IGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVT 1103

Query: 550  YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
            Y  ++ G   + + K+ + +L +M+++    +V  Y IL+ ++ ++ K
Sbjct: 1104 YNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK 1151



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 6/287 (2%)

Query: 399  MADRKIADCDSW-NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
            MA+R +    ++  IP   +   +    A  L  R+ +  + PD  T +  +   C +  
Sbjct: 920  MAERGVTSVGAYIRIPHNPM---KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQ 976

Query: 458  YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
                  +  ++  +    D+I+++ L+ GLC   ++ +A+     +   G  L+  S+  
Sbjct: 977  ITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGT 1036

Query: 518  LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            LI G+C +     AI+L        T      Y  I+  L K Q       +  +M V+G
Sbjct: 1037 LINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKG 1096

Query: 578  CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL-ADGSQLHLV 636
             + DV  Y  LI       KLK+     N MV   + P+  T   L+  L  +G  L   
Sbjct: 1097 ISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDE 1156

Query: 637  S-SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
            S S ++K+  +    ++  + I+I+ L+++    +   LL  M+ +G
Sbjct: 1157 SLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 4/243 (1%)

Query: 457  NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
            +Y  A+ +  ++  + +  D  + + L+   C + +IT    +   + K G    + +F 
Sbjct: 941  HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFT 1000

Query: 517  ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
             LI GLC+  +V+KA+       + G      +Y  ++ G+ K+   +  + +L ++   
Sbjct: 1001 TLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGR 1060

Query: 577  GCALDVEAYCILIQSMSEQNKL-KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
                DV  Y  +I ++ +   + K   LFF + VK G+  D  T  +L++G     +L  
Sbjct: 1061 LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVK-GISADVVTYNTLIYGFCIVGKLKE 1119

Query: 636  VSSGINKLVSDSEVLDSSMYNILINGLWKEG--LTSQASYLLDLMLGKGWVPDATTHGLL 693
                +NK+V  +   +   YNIL++ L KEG  L  ++  +L  M   G   +A T  ++
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179

Query: 694  VGS 696
            + +
Sbjct: 1180 ISA 1182



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/322 (19%), Positives = 124/322 (38%), Gaps = 77/322 (23%)

Query: 220  SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            +A+    R+  KG  P+  T  I+I       ++  + SIL ++   G   +   +T +I
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 280  PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              LC + ++ +A+     + A     ++++Y  LIN                        
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLIN------------------------ 1039

Query: 340  PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
                       G+C++G    ++  L    G +T P    +N +++  C       A  +
Sbjct: 1040 -----------GVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGL 1088

Query: 396  LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
              +M  + I AD  ++N  I   C   ++++A  LL +MV+ ++ P+  TY+        
Sbjct: 1089 FFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNI------- 1141

Query: 455  LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK--ITEAVEVFCCMSKNGCSLSS 512
                                        LV+ LC+  K  + E++ +   M  NGC  ++
Sbjct: 1142 ----------------------------LVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173

Query: 513  SSFNILIYGLCVMRKVDKAIRL 534
             +F I+I  L    + DK  +L
Sbjct: 1174 VTFEIIISALFEKDENDKVEKL 1195


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/570 (21%), Positives = 258/570 (45%), Gaps = 14/570 (2%)

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL---VNMNS 159
           + +L  AG+V+ ++   Q M     P    AL++ V +F      + A++     V+   
Sbjct: 62  VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
                   ++N ++ A++ E       V VY  M K G+ PNV T N L+  L + NR+ 
Sbjct: 122 CARPTEPRLYNHLIDALLRENM-VGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVG 180

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           +A      M +KGC P+  T+  ++  L    R+D++  +L  M  +      + Y  I+
Sbjct: 181 AARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVA-----ASYNAIV 235

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LCRE +++E   +   M    L P+ +TY  +++  C+   L  A  IL  M++ G T
Sbjct: 236 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 295

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           P    F  +VRGL + G+  ++++     + +     T  +N L+   C+ G    A  I
Sbjct: 296 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI 355

Query: 396 LEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L  M       +  +++  I    +  ++  A  +   M  S   P+   Y+  V   CK
Sbjct: 356 LNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCK 415

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
              +  A  +  ++  ++   ++++++ L+  LC   ++  A+ VF  M ++GC  +  +
Sbjct: 416 KLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT 475

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LI+GL        A+ + +   S G   +  TY  ++ GL + + +++ +V + +M+
Sbjct: 476 YNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMI 535

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           V+G   +   +  +I +  ++ +++  A     M       +      L+  L +  +L 
Sbjct: 536 VQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLV 595

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              + + K++ +    ++  +N+L+ G+++
Sbjct: 596 DAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 625



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 205/440 (46%), Gaps = 18/440 (4%)

Query: 265 DLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           DLG     E   Y  +I  L REN +   + ++  MR   + P+  TY  L+  LC+N R
Sbjct: 119 DLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNR 178

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
           +  A  +L++M   G  P D  +  IV  LC++ + DE+   L      V + +NA++  
Sbjct: 179 VGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA-AMPPVAASYNAIVLA 237

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C   +      ++  M  R +  +  ++   +   C+  E+R A  +L RMV++   P+
Sbjct: 238 LCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPN 297

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T++A V G        DAL ++R + A+     ++SY+ L+ GLC V  +  A  +  
Sbjct: 298 VVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILN 357

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK-- 559
            M ++GC  +  +++ LI G      +  AI + +    SG       YT ++    K  
Sbjct: 358 SMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 417

Query: 560 -LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
              +AK L   + +ML+E C  +   +  LI+S+ +  ++      F+ M + G VP+  
Sbjct: 418 MFNQAKSL---IDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 474

Query: 619 TMLSLLHGLAD----GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           T   L+HGL      G  LH+V+    ++ S    L    YN +++GL +  ++ +A   
Sbjct: 475 TYNELIHGLFREGNCGDALHMVT----EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVF 530

Query: 675 LDLMLGKGWVPDATTHGLLV 694
           +  M+ +G  P+A T   ++
Sbjct: 531 VGKMIVQGIQPNAFTFSAII 550



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/519 (21%), Positives = 215/519 (41%), Gaps = 61/519 (11%)

Query: 225 FRRMHKKGCC--PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           +R +H  GC      R +  +I  L+  + V   V +   M   G+   +  Y  ++  L
Sbjct: 114 YRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRAL 173

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C+ N++  A ++   M      PD++TY  +++ LC+  RLD+A ++L  M      P  
Sbjct: 174 CQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVA 228

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             +  IV  LC   +  E  + + D  G    P    +  +++  C AG+  +A  IL +
Sbjct: 229 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 288

Query: 399 MADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           M    I  C     ++   +R L ++  +  A ++   MV     P   +Y+  + G C 
Sbjct: 289 MV---ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 345

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG------- 507
           + + + A  +   +       +  +YS L++G  +   +  A+ ++  MS++G       
Sbjct: 346 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 405

Query: 508 ----------------------------CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
                                       C  ++ +FN LI  LC  R+V +A+ +     
Sbjct: 406 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 465

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G      TY +++ GL +     D L ++ +M   G  L +  Y  ++  + +    +
Sbjct: 466 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 525

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS---SGINKLVSDSEVLDSSMYN 656
           +  +F   M+  G+ P+  T  +++H      ++ + +     +N +     +L   +Y 
Sbjct: 526 EAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL---VYT 582

Query: 657 ILINGLW-KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           IL+  L  ++ L    +YLL  ML +G  P+  T  +LV
Sbjct: 583 ILMAELCNQDKLVDAMTYLLK-MLYEGIYPNTVTWNVLV 620



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 18/276 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKR--------FQHTADTYCKMILKLGLAGNVEEMEG 117
           LI       DL  A+ I  W  + +         + +  D +CK ++         + + 
Sbjct: 374 LIDGFSKAGDLGGAISI--WNDMSRSGCKPNVVVYTNMVDVFCKKLM-------FNQAKS 424

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           L   M+ E  P       +L+ S  +  RV  A+ V   M   G   +   +N ++  + 
Sbjct: 425 LIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLF 484

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E     D + +  EM   GI  ++ T N ++  L +T     A+    +M  +G  PN+
Sbjct: 485 REGN-CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNA 543

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +I        V  +  +LG M  +     +  YT ++  LC ++KL +A+     
Sbjct: 544 FTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLK 603

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           M    + P+ +T+  L+  +  NL   + +D ++ +
Sbjct: 604 MLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 639


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 220/470 (46%), Gaps = 6/470 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L A+V  K  +   V +Y++M   G+  +V TL  L+  L   + +        ++
Sbjct: 107 FNQLLAALVRMKH-YDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKI 165

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P+  TF  +I GL    R+ +++  L  +   G Q  +  +T I+  LC+  K 
Sbjct: 166 FKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKT 225

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI   K M  LD  P+ ++Y  +I+ LC+N  +++A D+   M  IG++PT   +  +
Sbjct: 226 SAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSL 285

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G+C  G++ ++    ++   +   P     + L++  C  G    A  +  KM    +
Sbjct: 286 IYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAM 345

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  I  +C++   +++  LL  M+  ++ PD  T+S +V   CK     +A  
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQS 405

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +   +  + L  + ++Y+ L++G C   ++ EA +VF  M   GC+    S+NILI G C
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC 465

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              ++D+A +L       G +  + T+T ++ GL +  R      +  +M   GC  D+ 
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
            Y  L+    +   L +    F  + K+ L P+      LL G+    +L
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 192/396 (48%), Gaps = 6/396 (1%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+  AM  L  + S G++ +V    +++  + +  +  A  V++ K+MV+    P V + 
Sbjct: 189 RIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWM-KKMVELDCEPEVVSY 247

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + +++ L +   +  A+D F  M   G  P   T+  +I G+  + +   +  +  EM +
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             ++ ++  ++ ++  LC+E  + EA+ +F  M  + + PD +TY  LI+ +C++    +
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKE 367

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           ++ +L +M+   + P    F   V   C+ G   E+ + +         P    +N+L++
Sbjct: 368 SSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMD 427

Query: 382 CCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C   +   A+ + + M ++  A D  S+NI I+  C++E I +A +L   M    + P
Sbjct: 428 GYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++  + G C+      A  +F+++ +     D I+YS L+ G C+   + EA+ +F
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             + K+    +     IL+ G+C   K++ A  L S
Sbjct: 548 EALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFS 583



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 189/452 (41%), Gaps = 46/452 (10%)

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           S  DD+++   +M  +     ++ +  ++  L R    +  + +++ M    +     T 
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LINCLC    +     +L  +  +G  P+   F  ++ GLC  G+  E++  L+    
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEE 422
               P    H  ++   C  GK   A   ++KM +    DC+    S++I I  LC+N  
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVE---LDCEPEVVSYSIIIDSLCKNRL 259

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A +L   M    + P   TY++ + G C    ++ A  +F+++   ++  D +++S 
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSI 319

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           LV+ LC+   + EA+ VF  M +        +++ LI+G+C                   
Sbjct: 320 LVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC------------------- 360

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                           K    K+   +L +ML      DV  + I +    ++  + +  
Sbjct: 361 ----------------KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
              N+M++ GL P+  T  SL+ G    SQ+       + +V+     D   YNILI G 
Sbjct: 405 SIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGY 464

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K     +A  L D M  KG  P++ TH  L+
Sbjct: 465 CKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 6/321 (1%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
            I I  LC    +   + +LG++      P   T++  + G C      +A+     + +
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           +       +++ +V GLC++ K + A+     M +  C     S++I+I  LC  R V++
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ L     S G S T  TY  ++ G+    + K   ++  +ML      DV  + IL+ 
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
           ++ ++  + +    F  M++  + PD  T  SL+HG+   S     S+ +N+++S +   
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAF 709
           D   ++I ++   K+G+ S+A  +++LM+ +G  P+  T+  L+ G  +  ++D  R  F
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 710 D----SSSFPDSVS-DILAEG 725
           D        PD +S +IL +G
Sbjct: 443 DIMVNKGCAPDVLSYNILIKG 463



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  MV  G  P+V + N L++   ++ RI+ A   F  M  KG  PNS T   +I GL 
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R   +  +  +M   G   +L  Y+ ++   C+   L+EA+ LF+ ++   L P+ +
Sbjct: 501 QAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHV 560

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             + L+  +C+  +L+DA ++   + +  L P
Sbjct: 561 ICKILLGGMCKAGKLEDAKELFSSLSIEELQP 592


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 219/437 (50%), Gaps = 5/437 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + ++  MV+   +P++   + LL  + +  + +  +  + +M   G   N  T  I++
Sbjct: 64  DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                 S++  ++S LG+M  LG + ++  +  ++   CR +++ +A+ +F  M  +   
Sbjct: 124 NCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYE 183

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ + Y  +I+ LC++ ++D+A D+L  M V G+ P    +  ++ GLC  G++D++   
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRM 243

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           +         P     NAL++ C   G+   A+ + E+M  R +  D  ++++ I  LC 
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              + +A ++ G MV     PD  TYS  + G CK    E  +++F ++S + +V ++++
Sbjct: 304 YSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G C+  K+  A E+F  M   G   +  ++N+L++GLC   K++KA+ + +   
Sbjct: 364 YTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            SG      TY  I+ G+ K     D   +   + ++G   D+  Y  ++  + ++    
Sbjct: 424 KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRG 483

Query: 600 DCALFFNVMVKAGLVPD 616
           +    F  M + G++P+
Sbjct: 484 EADALFRKMKEDGILPN 500



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 207/443 (46%), Gaps = 20/443 (4%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y+EM++ GI        Y+        +++ +LD F  M +    P+   F  ++  +  
Sbjct: 49  YREMLRNGI-------RYM--------KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK 93

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             + D  + +  +M  LGI   L     ++   CR ++L  A+     M  L   PD +T
Sbjct: 94  MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVT 153

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--- 366
           +  L+N  C   R+ DA  + + M+ +G  P   ++  I+ GLC+  + D +++ L    
Sbjct: 154 FGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213

Query: 367 -DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
            D        +N+L+   CN+G++  A  ++  M  R+I  D  ++N  I    +   I 
Sbjct: 214 VDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRIS 273

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A EL   M+  S+ PD  TYS  + G C     ++A ++F  + ++    D ++YS L+
Sbjct: 274 EAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILI 333

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G C+ +K+   +++FC MS+ G   ++ ++ +LI G C   K++ A  +       G  
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVP 393

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL    + +  LV+LA M   G   D+  Y I+I+ M +  ++ D    
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDL 453

Query: 605 FNVMVKAGLVPDRETMLSLLHGL 627
           +  +   GL PD  T  +++ GL
Sbjct: 454 YCSLNLKGLTPDIWTYTAMMLGL 476



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 203/454 (44%), Gaps = 36/454 (7%)

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  +++  I   ++DDS+ +   M        ++ ++ ++  + +  K +  I L++ M+
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            L +  +  T   L+NC C   +L  A   L  M+ +G  P    F  ++ G C   +  
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
           +++   +        P+  +                              +N  I  LC+
Sbjct: 169 DALYMFDRMVEMGYEPNVVI------------------------------YNTIIDGLCK 198

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           ++++  A +LL RM V  + PD  TY++ + G C    ++DA R+   ++ + +  D  +
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           ++ L++   +  +I+EA E++  M +        ++++LIYGLC+  ++D+A ++     
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S G      TY+ ++ G  K ++ +  + +  +M   G   +   Y +LIQ      KL 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH---LVSSGINKLVSDSEVLDSSMYN 656
                F  MV  G+ P+  T   LLHGL D  ++    ++ + + K   D++++    YN
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIV---TYN 435

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           I+I G+ K G  + A  L   +  KG  PD  T+
Sbjct: 436 IIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTY 469



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 165/391 (42%), Gaps = 7/391 (1%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y E++      ++LDD+ D+   M+     P+   F  ++  + ++ K+D  V +L ++ 
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD-VVIYLWEQM 107

Query: 370 GYVTSPHN-----ALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEI 423
             +  PHN      LL C C   +  LA   L KM       D  ++   +   C  + I
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRI 167

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  +  RMV     P+   Y+  + G CK    ++AL +  ++    +  D+++Y+ L
Sbjct: 168 YDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSL 227

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC   +  +A  +  CM+K        +FN LI       ++ +A  L         
Sbjct: 228 ISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TY+ ++ GL    R  +   +   M+ +GC  DV  Y ILI    +  K++    
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  M + G+V +  T   L+ G     +L++       +V      +   YN+L++GL 
Sbjct: 348 LFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLC 407

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             G   +A  +L  M   G   D  T+ +++
Sbjct: 408 DNGKIEKALVILADMQKSGMDADIVTYNIII 438



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 1/226 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+    N  R + A R++  M        V  FN ++ A V+E R  ++   +Y+EM++
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR-ISEAEELYEEMIR 284

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + P++ T + L+  L   +R++ A   F  M  KGC P+  T+ I+I G   + +V+ 
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            + +  EM   G+      YT +I   CR  KL  A  +FK M    + P+ +TY  L++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLH 404

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            LC+N +++ A  IL DM   G+      +  I+RG+C+ G+  ++
Sbjct: 405 GLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADA 450



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 111/234 (47%), Gaps = 3/234 (1%)

Query: 110 GNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G + E E L + M++    P++    + L++    + R++ A ++   M S G    V  
Sbjct: 270 GRISEAEELYEEMIRRSLDPDIVTYSL-LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVT 328

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +++++    + K+     + ++ EM + G+V N  T   L++      ++  A + F+ M
Sbjct: 329 YSILINGYCKSKK-VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G  PN  T+ +++ GL  N +++ ++ IL +M   G+  ++  Y  II  +C+  ++
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            +A  L+  +    L PD  TY  ++  L +     +A+ +   M   G+ P +
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 94/221 (42%)

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y +++    +  K+ +++++F  M +     S + F+ L+  +  M+K D  I L     
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G  +   T   ++    +  +    L  L +M+  G   D+  +  L+      +++ 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           D    F+ MV+ G  P+     +++ GL    Q+      +N++  D    D+  YN LI
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           +GL   G    A+ ++  M  +   PD  T   L+ + V E
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKE 269


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 150/652 (23%), Positives = 282/652 (43%), Gaps = 46/652 (7%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           + S    ++E +++ L  +L P  +  VL +  D   AL  F W   Q R+ H    Y  
Sbjct: 142 LSSAWNPNFEGRLRHLLRSLKPSLVCAVLRSQADERVALNFFYWADRQWRYSHHPLVYYT 201

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           ++       +V     LCQ                            GA RVL  M   G
Sbjct: 202 LL-------DVLSKTKLCQ----------------------------GARRVLRLMTRRG 226

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
            +LS + F  V+ +     +   + + V   M KAG+ PN+   N  + VL +  ++E A
Sbjct: 227 IELSPEAFGCVMVSYSRAGK-LRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKA 285

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           L    RM   G  P+  T+  +IKG    +R++D++ ++  +   G   +   Y  ++  
Sbjct: 286 LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 345

Query: 282 LCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           LC+E K+E+   L  KM++  +L+PD++TY  LI+ L ++   DDA   L++    G   
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  IV   C+ G+ DE+ + + D      +P    + A+++  C  G+   AK +L
Sbjct: 406 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKML 465

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M       +  S+   +  LC + +  +A E++         P+  TY   + G  + 
Sbjct: 466 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRRE 525

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF-CCMSKNGCSLSSSS 514
               +A  + R++  +      +  + L++ LCQ +K+ EA +    C++K GC+++  +
Sbjct: 526 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNK-GCAINVVN 584

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           F  +I+G C +  ++ A+ +    Y S       TYT +   L K  R  +   ++ +ML
Sbjct: 585 FTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKML 644

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G       +  +I    +  ++ D     + MVK    P R     ++  L D   L 
Sbjct: 645 SKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRK--PFRTIYNHVIEKLCDFGNLE 702

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                + K++  +  LD++  ++L+    K+G+   A  +   M  +   PD
Sbjct: 703 EAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPD 754



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/484 (22%), Positives = 206/484 (42%), Gaps = 33/484 (6%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           LL+VL +T   + A    R M ++G   +   F  V+       ++ +++ +L  M   G
Sbjct: 202 LLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAG 261

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++  LS     I +L +  KLE+A+R  + M+   + PD +TY  LI   C+  R++DA 
Sbjct: 262 VEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 321

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAG 387
           +++  +   G  P                          DK  Y T     ++   C   
Sbjct: 322 ELIAGLPSKGCPP--------------------------DKVSYYT-----VMGFLCKEK 350

Query: 388 KFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           K    KC++EKM      I D  ++N  I  L ++     A   L          D   Y
Sbjct: 351 KIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGY 410

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           SA V   C+    ++A  +   + ++S   D ++Y+ +V+G C++ +I EA ++   M K
Sbjct: 411 SAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYK 470

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           +GC  ++ S+  L+ GLC   K  +A  + +++     +    TY  +M G  +  +  +
Sbjct: 471 HGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSE 530

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
              +  +M+ +G         +LIQS+ +  K+ +   +    +  G   +     +++H
Sbjct: 531 ACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIH 590

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           G      +    S +  +   ++  D+  Y  L + L K+G   +A+ L+  ML KG  P
Sbjct: 591 GFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDP 650

Query: 686 DATT 689
              T
Sbjct: 651 TPVT 654



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 7/290 (2%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I  L +  ++ KA   L RM V+ + PD  TY++ + G C L   EDAL +   + +
Sbjct: 270 NTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPS 329

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK----NGCSLSSSSFNILIYGLCVMR 526
           +    D +SY  ++  LC+ +KI +   V C M K    +       ++N LI+ L    
Sbjct: 330 KGCPPDKVSYYTVMGFLCKEKKIEQ---VKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHG 386

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
             D A+     A   G       Y+ I+    +  R  +   ++  M    C  DV  Y 
Sbjct: 387 HADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYT 446

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            ++       ++ +       M K G  P+  +  +LL+GL    +       IN     
Sbjct: 447 AIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEH 506

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               ++  Y ++++G  +EG  S+A  L   M+ KG+ P      LL+ S
Sbjct: 507 WWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 6/303 (1%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++R A  +L  M  + V P+ +  +  +    K C  E ALR   ++    +  D ++Y+
Sbjct: 246 KLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYN 305

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYS 540
            L++G C + +I +A+E+   +   GC     S+  ++  LC  +K+++    +  +   
Sbjct: 306 SLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQD 365

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           S       TY  ++  L K   A D L  L +   +G  +D   Y  ++ S  ++ ++ +
Sbjct: 366 SNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDE 425

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                  M      PD  T  +++ G     ++      + ++       ++  Y  L+N
Sbjct: 426 AKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLN 485

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSSSFP 715
           GL   G + +A  ++++     W P+A T     HG      + E  D  R   +   FP
Sbjct: 486 GLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFP 545

Query: 716 DSV 718
             V
Sbjct: 546 TPV 548



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 10/224 (4%)

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           +LD +S +KL +G         A  V   M++ G  LS  +F  ++       K+  A+R
Sbjct: 202 LLDVLSKTKLCQG---------ARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALR 252

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           + +L   +G     S     +  LVK  + +  L  L +M V G   D+  Y  LI+   
Sbjct: 253 VLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYC 312

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL-DS 652
           + N+++D       +   G  PD+ +  +++  L    ++  V   + K+V DS ++ D 
Sbjct: 313 DLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQ 372

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             YN LI+ L K G    A   L     KG+  D   +  +V S
Sbjct: 373 VTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416



 Score = 39.3 bits (90), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 6/182 (3%)

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           S+    Y  ++  L K +  +    VL  M   G  L  EA+  ++ S S   KL++   
Sbjct: 193 SHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALR 252

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
              +M KAG+ P+     + ++ L  G +L      + ++       D   YN LI G  
Sbjct: 253 VLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYC 312

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTH----GLLVGSSVGEEIDS--RRFAFDSSSFPDS 717
                  A  L+  +  KG  PD  ++    G L      E++     +   DS+  PD 
Sbjct: 313 DLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQ 372

Query: 718 VS 719
           V+
Sbjct: 373 VT 374


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/585 (22%), Positives = 261/585 (44%), Gaps = 41/585 (7%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  ++V M + G  +++  +NV++  + ++++ + + V + K++    + P+V T   L+
Sbjct: 246 AKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVW-EAVGIKKDLAGKELKPDVVTYCTLV 304

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +    E  L+    M +    P+      +++GL    +V+++++++  + + G+ 
Sbjct: 305 CGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVS 364

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y  +I  LC+    +EA  LF  M  + L P+++TY  LI+  C   +LD A   
Sbjct: 365 PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           L +MI +GL P+   +  ++ G C+ G    + + + +       P    + +L+   C+
Sbjct: 425 LGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCS 484

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            GK   A  +  +M  + I     ++   +  L     IR A +L   M   +V P+  T
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G C+  N   A     ++  + +V D+ SY  L+ GLC   + +EA      + 
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           K  C L+   +  L++G C   K+++A+ +       G       Y  ++ G +K +  K
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
             L +L +M   G   D   Y  +I + S+    K+    +++M+  G VP+  T  +++
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724

Query: 625 HGLAD--------------------------GSQLHLVSSGINKLVSDSE---------V 649
           +GL                            G  L +++ G+  +    E         +
Sbjct: 725 NGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLL 784

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +++ YN+LI G  ++G   +AS L+  M+G G  PD  T+  ++
Sbjct: 785 ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMI 829



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 161/751 (21%), Positives = 312/751 (41%), Gaps = 65/751 (8%)

Query: 5   LSSLTISNKIIKWVNLTSCISSLSCANTIP-----LSSETDMIKSHQTTDYEAKIQSLRH 59
           + SL+ S+    + NL+S I S   A  I      + S   +++  ++ +     + +  
Sbjct: 7   IRSLSSSHLRYSFRNLSSVIDSSQEACRIGEDKQFVDSVRRIVRGKRSWEIALSSELVSR 66

Query: 60  NLSPDHLIRVLDNT-NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG- 117
            L   H+  +L  T +D    L+ F ++ + + F H+  ++C +I  L  A         
Sbjct: 67  RLKTIHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSL 126

Query: 118 -LCQNMVKERYPNVREALIS---------------LVFSFVNHYRV-NGAMRVLVNMNSG 160
                +   +   V +AL S               L+  +V   RV +G +   + M   
Sbjct: 127 LQTLLLRALKPSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKV 186

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
                V   + +L  +V + R F   + ++ +M+  GI P+V     ++  L E   +  
Sbjct: 187 SLLPEVRTLSALLHGLV-KFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSR 245

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----------------- 263
           A +   +M   GC  N   + ++I GL    +V ++V I  ++                 
Sbjct: 246 AKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVC 305

Query: 264 -------FDLGIQ-----LELSF------YTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
                  F++G++     L L F       + ++  L +  K+EEA+ L K +    + P
Sbjct: 306 GLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSP 365

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +   Y  LI+ LC+    D+A  + + M  IGL P D  +  ++   C  GK D +++FL
Sbjct: 366 NIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFL 425

Query: 366 ED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
            +    G   S  P+N+L+   C  G    A+ ++ +M ++K+     ++   +   C  
Sbjct: 426 GEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK 485

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            +I KA  L   M    +VP   T++  + G  +     DA+++F +++  ++  + ++Y
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTY 545

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++EG C+   +++A E    M + G    + S+  LI+GLC+  +  +A       + 
Sbjct: 546 NVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                    YT ++ G  +  + ++ L V   M + G  LD+  Y +LI    +    K 
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKV 665

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                  M   GL PD     S++   +            + ++++  V +   Y  +IN
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           GL K G  ++A  L   M     VP+  T+G
Sbjct: 726 GLCKAGFVNEAEILCSKMRPGNSVPNQVTYG 756



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/538 (23%), Positives = 240/538 (44%), Gaps = 46/538 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           F++++   V  +R   D V V+K M+ K  ++P V TL+ LL  L +      A++ F  
Sbjct: 159 FDLLIQHYVRSRR-VLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDD 217

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M   G  P+   +  VI+ L     +  +  ++ +M   G  + +  Y  +I  LC++ K
Sbjct: 218 MINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQK 277

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           + EA+ + K +   +L PD +TY  L+  LC+    +   +++++M+ +  +P++     
Sbjct: 278 VWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSS 337

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           +V GL + GK +E++N ++    +  SP    +NAL++  C    F  A+ + ++M   K
Sbjct: 338 LVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMG--K 395

Query: 404 IADCD---SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           I  C    +++I I   C   ++  A   LG M+   + P    Y++ + G CK  +   
Sbjct: 396 IGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISA 455

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +  ++  + L    ++Y+ L+ G C               SK               
Sbjct: 456 AESLMAEMINKKLEPTVVTYTSLMGGYC---------------SKG-------------- 486

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
                 K++KA+RL       G   +  T+T ++ GL +    +D + +  +M       
Sbjct: 487 ------KINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKP 540

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +   Y ++I+   E+  +     F N M++ G+VPD  +   L+HGL    Q       +
Sbjct: 541 NRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
           + L   +  L+   Y  L++G  +EG   +A  +   M  +G   D   +G+L+  S+
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSL 658



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/596 (21%), Positives = 258/596 (43%), Gaps = 56/596 (9%)

Query: 81  KIFKWVSIQK-----RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           K+++ V I+K       +    TYC ++  L      E    +   M++ R+     A+ 
Sbjct: 277 KVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVS 336

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SLV       +V  A+ ++  +   G   ++ V+N ++ ++  + R F +   ++  M K
Sbjct: 337 SLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLC-KGRNFDEAELLFDRMGK 395

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PN  T + L+++     ++++AL     M   G  P+   +  +I G      +  
Sbjct: 396 IGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISA 455

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR---------------------- 293
           + S++ EM +  ++  +  YT ++   C + K+ +A+R                      
Sbjct: 456 AESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLS 515

Query: 294 -------------LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                        LF  M   ++ P+ +TY  +I   CE   +  A + L +MI  G+ P
Sbjct: 516 GLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ GLC  G+  E+  F++      C      +  LL   C  GK   A  + 
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           + M  R +  D   + + I    ++++ +    LL  M    + PD   Y++ +  K K 
Sbjct: 636 QDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS- 514
            ++++A  ++  +  +  V + ++Y+ ++ GLC+   + EA E+ C   + G S+ +   
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-EILCSKMRPGNSVPNQVT 754

Query: 515 ----FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
                +IL  G+  M+   KA+ L + A   G    T+TY  ++ G  +  R ++   ++
Sbjct: 755 YGCFLDILTKGVGDMK---KAVELHN-AILKGLLANTATYNMLIRGFCRQGRMEEASELI 810

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
            +M+ +G + D   Y  +I  +  +N +K     +N M + G+ PDR    +L+HG
Sbjct: 811 TRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 205/451 (45%), Gaps = 18/451 (3%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G++   E L   M+ ++         SL+  + +  ++N A+R+   M   G   S+  F
Sbjct: 451 GDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTF 510

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             +L  +        D V ++ EM +  + PN  T N ++E   E   +  A +    M 
Sbjct: 511 TTLLSGLFRAGL-IRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMI 569

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           +KG  P++ ++  +I GL    +  ++   +  +     +L    YT ++   CRE KLE
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629

Query: 290 EAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDAN---DILEDMIVIGLTPTDDV 344
           EA+ + + M  R +DL  D + Y  LI+    +L+  D      +L++M   GL P D +
Sbjct: 630 EALSVCQDMGLRGVDL--DLVCYGVLID---GSLKHKDRKVFLGLLKEMHDRGLKPDDVI 684

Query: 345 FVDIVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM- 399
           +  ++    + G F E+       + + C      + A++   C AG    A+ +  KM 
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR 744

Query: 400 ADRKIADCDSWNIPIRWLCEN-EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               + +  ++   +  L +   +++KA EL    ++  ++ + ATY+  + G C+    
Sbjct: 745 PGNSVPNQVTYGCFLDILTKGVGDMKKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRM 803

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E+A  +  ++    +  D I+Y+ ++  LC+   + +A+E++  M++ G      ++N L
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           I+G CV  ++ KA  LR+     G    T T
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/471 (20%), Positives = 180/471 (38%), Gaps = 79/471 (16%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRA-LDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           +  +I    R  ++ + + +FKMM   + L+P+  T   L++ L +      A ++ +DM
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
           I +G+ P   ++  ++R LCE+     +                                
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAK------------------------------- 247

Query: 394 CILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
              E +   +   CD     +N+ I  LC+ +++ +A  +   +    + PD  TY   V
Sbjct: 248 ---EMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLV 304

Query: 450 LGKCKLCNY-----------------------------------EDALRVFRQVSAQSLV 474
            G CK+  +                                   E+AL + ++V+   + 
Sbjct: 305 CGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVS 364

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            +   Y+ L++ LC+     EA  +F  M K G   +  +++ILI   C   K+D A+  
Sbjct: 365 PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G   +   Y  ++ G  K         ++A+M+ +     V  Y  L+     
Sbjct: 425 LGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCS 484

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           + K+      ++ M   G+VP   T  +LL GL     +        ++   +   +   
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGE 700
           YN++I G  +EG  S+A   L+ M+ KG VPD  +     HGL +     E
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASE 595


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 249/563 (44%), Gaps = 45/563 (7%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           +L +L+ SFVN  + + A  VL  +   GF L+V  FN++L       +GF      +K 
Sbjct: 96  SLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLL-------KGFCQSGDSHKA 148

Query: 193 M------VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           M       +  ++P+  + N ++  L +  R+  A + F+ M    C PNS TF  +I G
Sbjct: 149 MDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDG 208

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              N  V++   +L EM  +G++ ++  Y+ +I   C +  +E    LF  M   ++ P+
Sbjct: 209 FCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPN 268

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  L+N LC+  +  +A  +L+ M    + P    +  +  GL + G+  +++  L+
Sbjct: 269 VVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLD 328

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
                   P+N                               ++N  I  LC+   +  A
Sbjct: 329 LMVKRGEEPNNV------------------------------TYNAIINGLCKEGRVDDA 358

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL--DSISYSKLV 484
             +L  M      PD  TYS  V G C +   ++A+ +   + ++   +  D  +++ ++
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           + LC+  ++  A  V+  M + G   +  ++NILI G     K+ KA+ L   A  SG S
Sbjct: 419 QELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGIS 478

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
              +TYT ++ GL K+Q       +  +    G    V  Y  L+ S+  ++ ++     
Sbjct: 479 PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNL 538

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  M  A   PD  +   ++ G      +      + ++++ + V D+  ++ILIN   K
Sbjct: 539 FQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLK 598

Query: 665 EGLTSQASYLLDLMLGKGWVPDA 687
            G   +A+ L + M+  G VPDA
Sbjct: 599 LGQLDEAASLYERMVSCGHVPDA 621



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 195/451 (43%), Gaps = 17/451 (3%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           F    D +CK        G+VEE  GL + M K           +L+  F +   +    
Sbjct: 202 FSALIDGFCK-------NGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGK 254

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            +   M       +V  ++ ++ A+ ++++ + +   +   M    + P+V     L + 
Sbjct: 255 ELFNEMLRKNVTPNVVTYSCLMNALCKKQK-WKEAAQMLDTMTGCKVRPDVVAYTVLADG 313

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L +  R   A+     M K+G  PN+ T+  +I GL    RVDD++ IL  M   G + +
Sbjct: 314 LSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPD 373

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFK--MMRALDLMPDELTYEELINCLCENLRLDDANDI 329
           +  Y+ ++  LC   K++EA+ L    M +   + PD   +  +I  LC+  RL  A  +
Sbjct: 374 VVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRV 433

Query: 330 LEDMIVIGLTPTDDVFVDI-VRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCC 384
              M+  G  P++ V  +I + G    GK  +++   +D      SP+ A    L+   C
Sbjct: 434 YYTMVERGF-PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC 492

Query: 385 NAGKFFLAKCIL-EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                 +AK +  +K A         +N  +  LC    + +A  L   M  ++  PD  
Sbjct: 493 KMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVV 552

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           +++  + G  K  + E A  +  ++   +LV D+I++S L+    ++ ++ EA  ++  M
Sbjct: 553 SFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERM 612

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
              G    +  F+ L+ G  +  K +K + +
Sbjct: 613 VSCGHVPDAVLFDSLLKGYSLKGKTEKVVSM 643



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 44/328 (13%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           +AL+E   N  K   A  +L  +  R    +  ++N+ ++  C++ +  KA +L   M  
Sbjct: 98  SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           + ++PDC +Y+  + G CK     +A  +F+++       +S+++S L++G C+   + E
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEE 217

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
              +   M K G       ++ LI G C    +++   L +       +    TY+ +M 
Sbjct: 218 GFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277

Query: 556 GLVKLQRAKDLLVVLAQML--VEGCAL--DVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            L K Q+ K+     AQML  + GC +  DV AY +L   +S+  +  D     ++MVK 
Sbjct: 278 ALCKKQKWKE----AAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G  P+  T                                   YN +INGL KEG    A
Sbjct: 334 GEEPNNVT-----------------------------------YNAIINGLCKEGRVDDA 358

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVG 699
             +L+ M  KG  PD  T+  LV    G
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCG 386



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 94/437 (21%), Positives = 182/437 (41%), Gaps = 45/437 (10%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  +I      G++E  + L   M+++   PNV      L+ +     +   A ++L  M
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNV-VTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                +  V  + V+   + +  R  +D + V   MVK G  PN  T N ++  L +  R
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRA-SDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF--DLGIQLELSFY 275
           ++ AL     M KKG  P+  T+  ++KGL    ++D++V +L  +   +  I+ ++  +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I  LC++ +L  A R++  M       + +TY  LI+      +L  A ++ +D + 
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVD 474

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            G++P    +  ++ GLC++     +      K    T P    +N L+   C       
Sbjct: 475 SGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQ 534

Query: 392 AKCILEKMADR-----------------KIADCDS-------------------WNIPIR 415
           A+ + ++M +                  K  D +S                   ++I I 
Sbjct: 535 ARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILIN 594

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
              +  ++ +A  L  RMV    VPD   + + + G       E  + + +Q++ + +VL
Sbjct: 595 RFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVL 654

Query: 476 DSISYSKLVEGLCQVEK 492
           DS   S ++  LC + K
Sbjct: 655 DSKLTSTILACLCNMSK 671



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 79/177 (44%), Gaps = 11/177 (6%)

Query: 159 SGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           + G + +V  +N ++ ++     VE+ R       +++EM  A   P+V + N +++   
Sbjct: 509 ASGTRPTVSEYNTLMASLCRESSVEQARN------LFQEMRNANHDPDVVSFNIIIDGTL 562

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +   +ESA +    M      P++ TF I+I   +   ++D++ S+   M   G   +  
Sbjct: 563 KAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAV 622

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
            +  ++     + K E+ + + + M   D++ D      ++ CLC   +  D   IL
Sbjct: 623 LFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKIL 679


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 251/539 (46%), Gaps = 36/539 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +Y +M++ G+ P   T N L++ L E+N ++ A + F +M +KGC PN  T  I+++G  
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 249 ANSRVDDSVSIL-GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
              R   ++  + G+M   G  +    Y  ++   C+++  +EA +L + M    L+PD 
Sbjct: 198 RAGRTKQALEFVDGKM---GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIG----LTPTDDVFVDIVRGLCEVGKFDESVN 363
           +T+   I+ LC   ++ +A+ I  DM + G      P    F  +++G C+ G  +E+ +
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 364 FLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
            +E   K G   S   +N  L      GK    + +L++M +  I  +  S+NI +  LC
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLC 374

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            N  +  A  L+  MV + V PD  TY+  + G C      +A  +  ++  +    ++ 
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTY 434

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           + + L+  L +  + +EA E+   M++    L + + NI++ GLC   +++KA  + S  
Sbjct: 435 TCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494

Query: 539 YSSGTS---------------YTTS-------TYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           ++ GT+               +  S       TYT ++ GL K+ + ++      +M+ +
Sbjct: 495 WTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK 554

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
               D   Y   + +  +Q K+         M + G     +T  SL+ GL    Q+  +
Sbjct: 555 NLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEM 614

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV-PDATTHGLLV 694
              ++++       D   YN +IN L + G T  A+ LL  ML KG V P+ ++  +L+
Sbjct: 615 YGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILI 673



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 147/583 (25%), Positives = 257/583 (44%), Gaps = 63/583 (10%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV SF      + A +++  M   G    V  FN  + A+    + F +   ++++M  
Sbjct: 224 TLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVF-EASRIFRDMQM 282

Query: 196 AGIV----PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            G +    PNV T N +L+   +   +E A      M K G   +  ++   + GL+ N 
Sbjct: 283 DGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNG 342

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++ +  S+L EM + GI+  +  Y  ++  LCR + + +A RL  +M +  + PD +TY 
Sbjct: 343 KLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYT 402

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            L++  C   ++ +A  IL +MI  G  P                               
Sbjct: 403 TLLHGYCSKGKVFEAKAILNEMIRKGCHPN------------------------------ 432

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
            T   N LL      G+   A+ +L+KM ++    D  + NI +  LC N E+ KA E++
Sbjct: 433 -TYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVV 491

Query: 431 GRMV----------------------VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
             M                       VS+ VPD  TY+  + G CK+   E+A + F ++
Sbjct: 492 SEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEM 551

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            A++L  DS++Y   V   C+  KI+ A+ V   M +NGCS +  ++N LI GL    ++
Sbjct: 552 MAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQI 611

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYCI 587
            +   L       G      TY  ++  L +  + KD   +L +ML +G  + +V ++ I
Sbjct: 612 FEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKI 671

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL-HGLADGSQLHLVSSGINKLVSD 646
           LI++  +    K     F+V +   +   +E + SL+ + L  G +L          +  
Sbjct: 672 LIKAFCKSGDFKVACELFDVAL--SVCGHKEALYSLMFNELLAGGKLSDAKELFEASLER 729

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           S +  + MY  LI+ L K+G    A  LL  ++ KG+  D ++
Sbjct: 730 SLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSS 772



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 126/264 (47%), Gaps = 11/264 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEG-LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L   G +EE +    + M K  +P+      + V +F    +++ A+RVL +
Sbjct: 527 TYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPD-SVTYDTFVLNFCKQGKISSALRVLKD 585

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   ++  +N ++  +  + + F  +  +  EM + GI P++ T N ++  L E  
Sbjct: 586 MERNGCSKTLQTYNSLILGLGSKGQIFEMYGLM-DEMRERGIHPDICTYNNMINCLCEGG 644

Query: 217 RIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL---EL 272
           + + A      M  KG   PN  +F+I+IK    +        +  E+FD+ + +   + 
Sbjct: 645 KTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSG----DFKVACELFDVALSVCGHKE 700

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + Y+ +   L    KL +A  LF+      L+     YE+LI+ LC++ RLDDA+ +L+ 
Sbjct: 701 ALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQK 760

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVG 356
           +I  G       F+ ++ GL + G
Sbjct: 761 LIDKGYCFDHSSFIPVIDGLSKRG 784


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 239/551 (43%), Gaps = 18/551 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           ++ +  +  +P +  LN LL  L              RM  +    N RT+  +I     
Sbjct: 29  HRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCL 84

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  +   L  +   G+  +   YT  +   CR   L  A R+F +M     +    T
Sbjct: 85  AGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFT 144

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++ L     + +A  +   M      P   V+  +V GLCE G+ +E+   LE+  
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIR 424
                P    +NAL++  CNAG+   A  + E M  +R   +  ++   I  LC++ ++ 
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  L  RMV + + P+  TY+A + G+C   + + A R+   +    LV +  ++S L+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           + LC+ EK+ EA      + K G  ++   +  LI GLC   K+D A  L     S G  
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               +Y+ ++ GL + ++     ++L  M+ +G       Y I+I  +  +   +     
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ M+  G+ PD  T    +    +  ++    S I ++V      +   YN LI G   
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFA----FDSSSFP 715
            GL SQA    ++M+GKGW P+  ++ +L+      SS    +D  + A       S++ 
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYD 564

Query: 716 DSVSDILAEGL 726
           + V  IL  GL
Sbjct: 565 EIVWKILIYGL 575



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 181/389 (46%), Gaps = 6/389 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+   +    V  AM V V M +        V+  ++  + E  R     V + + M  
Sbjct: 147 ALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSN 206

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PN+   N L++       +E AL  F  M    C PN RT+  +I GL  + +V+ 
Sbjct: 207 -GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +   M + G++  +  YT +I   C E  L+ A RL  +M    L+P++ T+  LI+
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVT 373
            LC+  ++++A   L  ++  G+   + V+  ++ GLC+ GK D +   ++     G+V 
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385

Query: 374 SPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
             H  ++L++  C   K   A  +LE M ++ I A   ++ I I  L          ++ 
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M+ + + PD  TY+ FV   C+    EDA  +  Q+  + +  + ++Y+ L+ G   +
Sbjct: 446 DKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILI 519
             +++A   F  M   G   +  S+ +L+
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 221/502 (44%), Gaps = 47/502 (9%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T   LL  L     +  A+  F  M    C P++  +  ++ GL    R +++  +L E 
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G +  +  Y  +I   C   ++E A+++F+ M      P+  TY ELI+ LC++ ++
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
           + A  +   M+  GL P      ++V                          + AL++  
Sbjct: 264 ERAMVLFSRMVEAGLEP------NVVT-------------------------YTALIQGQ 292

Query: 384 CNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           CN G    A  +L  M    +   D ++++ I  LC+ E++ +A   LG +V   V  + 
Sbjct: 293 CNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE 352

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             Y++ + G CK    + A  + +++ ++  V D+ SYS L++GLC+ +K+++A  +   
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M + G   S  ++ I+I  L      +   ++     ++G +    TYT  +    +  R
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
            +D   ++ QM+  G   ++  Y  LI+  +    +      F VMV  G  P+ ++   
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532

Query: 623 LLHGLADGSQLHLVSSGINKL----VSDSEVLDSSMYN-----ILINGLWKEGLTSQASY 673
           LL  +         SS  N +    ++D + L  S Y+     ILI GL ++G  ++ S 
Sbjct: 533 LLRLVVKK------SSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSS 586

Query: 674 LLDLMLGKGWVPDATTHGLLVG 695
           LL +M   G+ P  T + ++ G
Sbjct: 587 LLSVMKEHGYQPSNTINAMITG 608


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 228/514 (44%), Gaps = 44/514 (8%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F F+ ++MV  G +P++     L+  L +T +   A      +   G  P+  T+ ++I 
Sbjct: 130 FKFL-EDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLIS 188

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G      +  ++ +L  M    +  ++  Y  I+  LC   KL+EA+ +       +  P
Sbjct: 189 GYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYP 245

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +TY  LI   C+   +  A  +L++M   G  P    +  ++ G+C+ G+ DE++ FL
Sbjct: 246 DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL 305

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
                Y   P    HN +L   C+ G++  A+  L +M  +  +    ++NI I +LC  
Sbjct: 306 NHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRK 365

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             I +A ++L +M      P+                                   S+SY
Sbjct: 366 GLIGRAIDVLEKMPQHGCTPN-----------------------------------SLSY 390

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+  LC+ +K+  A+E    M   GC     ++N L+  LC   KVD A+ + +   S
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G S    TY  ++ GL K+ +  D + +L +M  +G   D+  Y  L+  +S + K+ +
Sbjct: 451 KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              FF+ + + G+ P+  T  S++ GL    Q       +  +V+       + Y ILI 
Sbjct: 511 AIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIE 570

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL  EGL  +A  LL+ +  +G V  ++   ++V
Sbjct: 571 GLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 231/487 (47%), Gaps = 11/487 (2%)

Query: 110 GNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G +EE     ++MV +   P++  A  SL+       +   A RV+  +   G    V  
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDII-ACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVIT 182

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +NV++    +      +     + + +  + P+V T N +L  L ++ +++ A++   R 
Sbjct: 183 YNVLISGYCKT----GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            ++ C P+  T+ I+I+     S V  ++ +L EM D G + ++  Y  +I  +C+E +L
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +EAIR    M +    P+ +T+  ++  +C   R  DA   L +MI  G +P+   F  +
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK- 403
           +  LC  G    +++ LE    +  +P    +N LL   C   K   A   L+ M  R  
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N  +  LC++ ++  A E+L ++      P   TY+  + G  K+   +DA++
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  + L  D I+YS LV GL +  K+ EA+  F  + + G   ++ ++N ++ GLC
Sbjct: 479 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 538

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             R+  +AI   +   + G   T ++Y  ++ GL     AK+ L +L ++   G      
Sbjct: 539 KARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 598

Query: 584 AYCILIQ 590
           A  ++++
Sbjct: 599 AEQVVVK 605



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 185/386 (47%), Gaps = 10/386 (2%)

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS 374
           L  N  L++    LEDM+  G  P       ++RGLC+ GK  ++   +E  +  G V  
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 375 --PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
              +N L+   C  G+   A  +L++M+     D  ++N  +R LC++ ++++A E+L R
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMSVS--PDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
            +     PD  TY+  +   CK      A+++  ++  +    D ++Y+ L+ G+C+  +
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA+     M   GC  +  + NI++  +C   +   A +  +     G S +  T+  
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++  L +       + VL +M   GC  +  +Y  L+ ++ +  K++    + ++MV  G
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD--SEVLDSSMYNILINGLWKEGLTSQ 670
             PD  T  +LL  L    ++ +    +N+L S   S VL +  YN +I+GL K G T  
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLIT--YNTVIDGLSKVGKTDD 475

Query: 671 ASYLLDLMLGKGWVPDATTHGLLVGS 696
           A  LLD M GKG  PD  T+  LVG 
Sbjct: 476 AIKLLDEMKGKGLKPDIITYSTLVGG 501



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 40/251 (15%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E+  +    +  +  + D I+ + L+ GLC+  K  +A  V   +  +G      ++N+L
Sbjct: 127 EEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVL 186

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C   ++  A++L         S    TY  I+  L    + K+ + VL + +   C
Sbjct: 187 ISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQREC 243

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y ILI++  +++ +       + M   G  PD  T                   
Sbjct: 244 YPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVT------------------- 284

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-- 696
                           YN+LING+ KEG   +A   L+ M   G  P+  TH +++ S  
Sbjct: 285 ----------------YNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMC 328

Query: 697 SVGEEIDSRRF 707
           S G  +D+ +F
Sbjct: 329 STGRWMDAEKF 339


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 212/451 (47%), Gaps = 6/451 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V  K  +   + ++K+    GI P++ TL+ L+        I  A   F  +
Sbjct: 60  FNNILSSLVNNKH-YPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANI 118

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  PN+ T   +IKGL     +  ++    ++   G QL+   Y  +I  LC+  + 
Sbjct: 119 LKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGET 178

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +   RL + +    + PD + Y  +IN LC+N  L DA D+  +MIV G++P    +  +
Sbjct: 179 KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTL 238

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C +G   E+ + L +      +P+    N L++     GK   AK +L  M    I
Sbjct: 239 IHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACI 298

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N  I      +E++ A  +   M    V PD   Y+  + G CK    ++A+ 
Sbjct: 299 KPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMS 358

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  ++++ D ++Y+ L++GLC+   +  A+ +   M + G      S+ IL+ GLC
Sbjct: 359 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLC 418

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              +++ A  +     + G       YT ++  L K     + L + ++M  +GC  D  
Sbjct: 419 KSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAV 478

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            + I+I+++ E+++          M+  GL+
Sbjct: 479 TFDIIIRALFEKDENDKAEKILREMIARGLL 509



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  I+  L         I LFK      + PD  T   LINC C    +  A  +  +++
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCN 385
             G  P       +++GLC  G+  +++ F +         D+  Y T     L+   C 
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGT-----LINGLCK 174

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G+      +L K+    +  D   +N  I  LC+N+ +  A ++   M+V  + PD  T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G C + + ++A  +  ++  +++  +  +++ L++ L +  K+ EA  +   M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           K        ++N LI G  ++ +V  A  +       G +     YT ++ GL K +   
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + + +  +M  +    D+  Y  LI  + + + L+        M + G+ PD  +   LL
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
            GL    +L        +L++    L+   Y +LIN L K G   +A  L   M  KG +
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 685 PDATTHGLLV 694
           PDA T  +++
Sbjct: 475 PDAVTFDIII 484



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 62/150 (41%)

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
           T  +  I+  LV  +    ++ +  Q    G   D+    ILI     Q  +      F 
Sbjct: 57  TFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 116

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            ++K G  P+  T+ +L+ GL    ++       ++LV+    LD   Y  LINGL K G
Sbjct: 117 NILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG 176

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            T   + LL  + G    PD   +  ++ S
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINS 206


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 223/509 (43%), Gaps = 39/509 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ E V+ G+ P   T   L++        +      R+M ++G  P++  F +VIKGL+
Sbjct: 316 LFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL 375

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            N + +D++++   + D G+  ++  Y C+I  L + +K+ EA+ L+  M+   + P  +
Sbjct: 376 RNKQWEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIV 434

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           T   L+   CE   +D+A  +  +M   G  P +  +  +++G  +   FD++   L + 
Sbjct: 435 TCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEM 494

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                  H   + C    G++                   ++NI I  LC  + + +  E
Sbjct: 495 -------HQNGVSC----GEY-------------------TYNILINGLCMVDRVCEVDE 524

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +L R V    VP   TY++ + G  K      AL ++RQ+  + +  + ++Y+  ++G C
Sbjct: 525 MLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYC 584

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +      AV++   M  NG     +++N  I   C    +  A+    L    G +   +
Sbjct: 585 RTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVT 644

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y   + G   L+   +       M+ +  A D E Y  LI   S+   +      ++ M
Sbjct: 645 VYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEM 704

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD----SSMYNILINGLWK 664
           +    +PD +T  +L HGL     +     G  +L+ D   LD    +  YN+LIN   +
Sbjct: 705 LANHNIPDDKTFTALTHGLCRSGDI----DGAKRLLDDMTRLDVCPNTVTYNMLINAHIR 760

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           +G   +A  L D ML  G VPD TT+ + 
Sbjct: 761 DGKLQEAFQLHDKMLSSGVVPDDTTYNIF 789



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/583 (22%), Positives = 235/583 (40%), Gaps = 80/583 (13%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y  MV  G+VP+  +   LL           AL  F  M  KG   +++ +++V++  + 
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
                D+V +  EM   G++ +   Y   I  LC+    + A+++   MR   L P + T
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 310 YEELINCLC------ENLRLDD------------------------------ANDILEDM 333
           Y  +++ L       E LRL D                              A D+ ++ 
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEA 320

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKF 389
           +  G+TPT+  +  +++G    G  DE+       +E      T   N +++      ++
Sbjct: 321 VRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQW 380

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A  + + + D  + D  ++   I WL ++ ++ +A  L  +M  + V P   T  + +
Sbjct: 381 EDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLL 440

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
           LG C+    ++AL+++ ++  +    + ++Y+ L++G  + +   +A  +   M +NG S
Sbjct: 441 LGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVS 500

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++NILI GLC++ +V +   +     S G   TT TY  I+ G VK       L +
Sbjct: 501 CGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAM 560

Query: 570 LAQMLVEG--------------------CAL---------------DVEAYCILIQSMSE 594
             QM  +G                    C L               D+ AY   I    +
Sbjct: 561 YRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCK 620

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           Q  +     F  +++K GL P+     S + G  +   +   S     ++      D+ +
Sbjct: 621 QGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEI 680

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPD-----ATTHGL 692
           Y  LI+G  K G  + A  L   ML    +PD     A THGL
Sbjct: 681 YTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGL 723



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 150/347 (43%), Gaps = 8/347 (2%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G ++E   L   M  + +P       +L+  ++     + A  +L  M+  G       +
Sbjct: 447 GCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTY 506

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N+++  +    R   +   + K  V  G VP   T N ++    +   + SAL  +R+M 
Sbjct: 507 NILINGLCMVDR-VCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMC 565

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           +KG  PN  T+   I G    +  D +V +L  M   GI  +++ Y   I M C++  + 
Sbjct: 566 EKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMS 625

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRL-DDANDILEDMIVIGLTPTDDVFVDI 348
            A+    ++    L P+   Y   +    +NL++  +A+     MI   +    +++  +
Sbjct: 626 HALHFLVLLLKDGLTPNVTVYNSFVTGY-KNLKMMAEASKFYYSMIKQRIAADTEIYTTL 684

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKI 404
           + G  +VG    ++    +       P +    AL    C +G    AK +L+ M    +
Sbjct: 685 IDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDV 744

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
             +  ++N+ I     + ++++A++L  +M+ S VVPD  TY+ F L
Sbjct: 745 CPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNIFPL 791


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 210/442 (47%), Gaps = 30/442 (6%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V+ + ++  +M + GIQ  L  +  +I +L ++ K+ EA  +   +   DL PD  TY  
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI   C N  LD A  + + M+  G  P    +  ++ GLC  G+ DE+++ LE+     
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE----- 293

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                                 ++EK  +  +    ++ +PI  LC  E   +A EL+ R
Sbjct: 294 ----------------------MIEKGIEPTVY---TYTLPITALCAIEHEEEAIELVAR 328

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M      P+  TY+A + G  +L   E A+ ++ ++  + LV ++++Y+ L+  LC   +
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
            + A+++F  M  +G   ++ ++N +I GLC+   ++KA+ L       G   T  TY  
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G +      +   +L  M   GC  D   Y  L+   S+  KL+  + +F  MV+ G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L P+  +  +L+ G +   ++ +  S + ++       +   YN +INGL KE   S+A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            + D M+ +G +P+  T+  L+
Sbjct: 569 KICDKMVEQGLLPNVITYTTLI 590



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 169/754 (22%), Positives = 307/754 (40%), Gaps = 102/754 (13%)

Query: 52  AKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----- 106
           ++++ L   L   H+  ++    D  S ++ F W+S +  ++H  + +  M+ +L     
Sbjct: 64  SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV 123

Query: 107 -GLAGNVE-EMEGLCQNMVK-ERYPNVREALISLVFSF------------VNHYRVNGAM 151
              A ++   M   C+N  +  R  +    +  + F F                 V GA 
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            +   M + G + S+  FN ++  I+ +K    +   +  ++ +  + P+V T   L+  
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLIN-ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
                 ++ A   F RM K+GC PNS T+  +I GL    RVD+++ +L EM + GI+  
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPT 302

Query: 272 LSFYTCIIPMLC-----------------------------------RENKLEEAIRLFK 296
           +  YT  I  LC                                   R  KLE AI L+ 
Sbjct: 303 VYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYH 362

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M    L+P+ +TY  LIN LC   R   A  I   M   G       + +I++GLC  G
Sbjct: 363 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG 422

Query: 357 KFDESVNFLEDKC----------------GYVTS-----------------------PHN 377
             ++++   E                   GY+T                         +N
Sbjct: 423 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            L+      GK   A    ++M +  +  +  S+   I    ++ ++  A  LL RM   
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              P+  +Y+A + G  K   + +A ++  ++  Q L+ + I+Y+ L++GLC+  +   A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            ++F  M K  C  +  +++ LIYGLC   K D+A R+  +    G   T  TY+ ++ G
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI----GCEPTLDTYSTLVSG 658

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L +  R  +   ++  M   G   D E Y  L+ +  +  ++      F+ +   G    
Sbjct: 659 LCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLH 718

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                +L+  L    Q+    +  + ++      D  ++ +L++GL KEG       LL 
Sbjct: 719 LSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLH 778

Query: 677 LMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFA 708
           +M  K + P+  T+ +L    S +G+ I+S   A
Sbjct: 779 IMESKNFTPNIQTYVILGRELSRIGKSIESEPLA 812



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 144/303 (47%), Gaps = 1/303 (0%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  L +  ++R+A  +L ++    + PD  TY++ +LG C+  N + A  VF ++
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    +S++YS L+ GLC   ++ EA+++   M + G   +  ++ + I  LC +   
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++AI L +     G      TYT ++ GL +L + +  + +  +ML EG   +   Y  L
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  +    +       F+ M   G + + +T   ++ GL  G  +        K++    
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRF 707
           +     YN LING   +G  + A+ LLDLM   G  PD  T+  LV G S   +++S  F
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 708 AFD 710
            F 
Sbjct: 500 YFQ 502


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 250/535 (46%), Gaps = 6/535 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L AI +  + F   + + + M    I  ++ + N L+      +++  AL  
Sbjct: 63  SIVEFNKLLSAIAKMNK-FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  P+  T   ++ G     R+ ++V+++ +MF +  Q     +  +I  L  
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA+ L   M A    PD  TY  ++N LC+   +D A  +L+ M    +     +
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           +  I+  LC     ++++N   +       P    +N+L+ C CN G++  A  +L  M 
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           +RKI  +  +++  I    +  ++ +A +L   M+  S+ PD  TYS+ + G C     +
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A  +F  + ++    + ++Y+ L++G C+ +++ E +E+F  MS+ G   ++ ++N LI
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GL      D A ++     S G      TY+ ++ GL K  + +  LVV   +      
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 481

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            D+  Y I+I+ M +  K++D    F  +   G+ P+     +++ G           + 
Sbjct: 482 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 541

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             ++  D  + +S  YN LI    ++G  + ++ L+  M   G+V DA+T  +++
Sbjct: 542 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 596



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 224/499 (44%), Gaps = 6/499 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    ++  A+ VL  M   G++  +   + +L      KR  ++ V +  +M   
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR-ISEAVALVDQMFVM 163

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
              PN  T N L+  LF  N+   A+    RM  +GC P+  T+  V+ GL     +D +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +S+L +M    I+ ++  YT II  LC    + +A+ LF  M    + P+ +TY  LI C
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC   R  DA+ +L DMI   + P    F  ++    + GK  E+    ++       P 
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
              +++L+   C   +   AK + E M  +    +  ++N  I+  C+ + + +  EL  
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    +V +  TY+  + G  +  + + A ++F+++ +  +  D I+YS L++GLC+  
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+ +A+ VF  + K+       ++NI+I G+C   KV+    L       G       YT
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 523

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  +    ++   +  +M  +G   +   Y  LI++          A     M   
Sbjct: 524 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 583

Query: 612 GLVPDRETMLSLLHGLADG 630
           G V D  T+  +++ L DG
Sbjct: 584 GFVGDASTISMVINMLHDG 602



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 221/522 (42%), Gaps = 48/522 (9%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+D F  M +    P+   F  ++  +   ++ D  +S+   M +L I  +L  Y 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR ++L  A+ +   M  L   PD +T   L+N  C   R+ +A  +++ M V+
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
              P    F  ++ GL    K  E+V  ++        P    +  ++   C  G   LA
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 393 KCILEKMADRKI------------ADCD------------------------SWNIPIRW 416
             +L+KM   KI            A C+                        ++N  IR 
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC       A  LL  M+   + P+  T+SA +    K     +A +++ ++  +S+  D
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +YS L+ G C  +++ EA  +F  M    C  +  ++N LI G C  ++V++ + L  
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G    T TY  ++ GL +         +  +M+ +G   D+  Y IL+  + +  
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDS 652
           KL+   + F  + K+ + PD  T   ++ G+    ++     L  S   K V  + ++  
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII-- 521

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             Y  +I+G  ++GL  +A  L   M   G +P++ T+  L+
Sbjct: 522 --YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/424 (21%), Positives = 174/424 (41%), Gaps = 40/424 (9%)

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--- 367
           E+L   +  +L+LDDA D+  +M+     P+   F  ++  + ++ KFD  ++  E    
Sbjct: 33  EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 92

Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD--------------------RKIAD 406
            +  Y    +N L+ C C   +  LA  +L KM                      ++I++
Sbjct: 93  LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 152

Query: 407 C----------------DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                             ++N  I  L  + +  +A  L+ RMV     PD  TY   V 
Sbjct: 153 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 212

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK  + + AL + +++    +  D + Y+ +++ LC  + + +A+ +F  M   G   
Sbjct: 213 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 272

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++N LI  LC   +   A RL S       +    T++ ++   VK  +  +   + 
Sbjct: 273 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 332

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+      D+  Y  LI      ++L +    F +M+     P+  T  +L+ G    
Sbjct: 333 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 392

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++        ++     V ++  YN LI GL++ G    A  +   M+  G  PD  T+
Sbjct: 393 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 452

Query: 691 GLLV 694
            +L+
Sbjct: 453 SILL 456


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 250/535 (46%), Gaps = 6/535 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L AI +  + F   + + + M    I  ++ + N L+      +++  AL  
Sbjct: 79  SIVEFNKLLSAIAKMNK-FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  P+  T   ++ G     R+ ++V+++ +MF +  Q     +  +I  L  
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA+ L   M A    PD  TY  ++N LC+   +D A  +L+ M    +     +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           +  I+  LC     ++++N   +       P    +N+L+ C CN G++  A  +L  M 
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
           +RKI  +  +++  I    +  ++ +A +L   M+  S+ PD  TYS+ + G C     +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A  +F  + ++    + ++Y+ L++G C+ +++ E +E+F  MS+ G   ++ ++N LI
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GL      D A ++     S G      TY+ ++ GL K  + +  LVV   +      
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            D+  Y I+I+ M +  K++D    F  +   G+ P+     +++ G           + 
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             ++  D  + +S  YN LI    ++G  + ++ L+  M   G+V DA+T  +++
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 224/499 (44%), Gaps = 6/499 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    ++  A+ VL  M   G++  +   + +L      KR  ++ V +  +M   
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR-ISEAVALVDQMFVM 179

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
              PN  T N L+  LF  N+   A+    RM  +GC P+  T+  V+ GL     +D +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +S+L +M    I+ ++  YT II  LC    + +A+ LF  M    + P+ +TY  LI C
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC   R  DA+ +L DMI   + P    F  ++    + GK  E+    ++       P 
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
              +++L+   C   +   AK + E M  +    +  ++N  I+  C+ + + +  EL  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    +V +  TY+  + G  +  + + A ++F+++ +  +  D I+YS L++GLC+  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+ +A+ VF  + K+       ++NI+I G+C   KV+    L       G       YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  +    ++   +  +M  +G   +   Y  LI++          A     M   
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599

Query: 612 GLVPDRETMLSLLHGLADG 630
           G V D  T+  +++ L DG
Sbjct: 600 GFVGDASTISMVINMLHDG 618



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 221/522 (42%), Gaps = 48/522 (9%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+D F  M +    P+   F  ++  +   ++ D  +S+   M +L I  +L  Y 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR ++L  A+ +   M  L   PD +T   L+N  C   R+ +A  +++ M V+
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
              P    F  ++ GL    K  E+V  ++        P    +  ++   C  G   LA
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 393 KCILEKMADRKI------------ADCD------------------------SWNIPIRW 416
             +L+KM   KI            A C+                        ++N  IR 
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC       A  LL  M+   + P+  T+SA +    K     +A +++ ++  +S+  D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +YS L+ G C  +++ EA  +F  M    C  +  ++N LI G C  ++V++ + L  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G    T TY  ++ GL +         +  +M+ +G   D+  Y IL+  + +  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDS 652
           KL+   + F  + K+ + PD  T   ++ G+    ++     L  S   K V  + ++  
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII-- 537

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             Y  +I+G  ++GL  +A  L   M   G +P++ T+  L+
Sbjct: 538 --YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/424 (21%), Positives = 174/424 (41%), Gaps = 40/424 (9%)

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--- 367
           E+L   +  +L+LDDA D+  +M+     P+   F  ++  + ++ KFD  ++  E    
Sbjct: 49  EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 108

Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD--------------------RKIAD 406
            +  Y    +N L+ C C   +  LA  +L KM                      ++I++
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168

Query: 407 C----------------DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                             ++N  I  L  + +  +A  L+ RMV     PD  TY   V 
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK  + + AL + +++    +  D + Y+ +++ LC  + + +A+ +F  M   G   
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++N LI  LC   +   A RL S       +    T++ ++   VK  +  +   + 
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M+      D+  Y  LI      ++L +    F +M+     P+  T  +L+ G    
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++        ++     V ++  YN LI GL++ G    A  +   M+  G  PD  T+
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 691 GLLV 694
            +L+
Sbjct: 469 SILL 472


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 174/729 (23%), Positives = 299/729 (41%), Gaps = 99/729 (13%)

Query: 52  AKIQSLRHNLSPDHLIRV---LDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           +K +S+  +L+P H  R+   L  T +  +  + F++ +    F+ T  +YC ++  L  
Sbjct: 71  SKCKSILPHLTPHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLLRSLLA 130

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
              V     L   ++    P       +   SF  H R+      ++ +N G  +  +  
Sbjct: 131 DSFVPRARFLLARLIDGHVPTWSSKTTT---SF--HDRLREIASSMLELNQGSDEQRLGE 185

Query: 169 FNVVLGAIVEEKR------GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
            +++L  +  + +       F  FV   K     G+ P + T N LL  L + N +  + 
Sbjct: 186 LDLLLHILCSQFKCLGSRCAFDIFVMFSKR----GVFPCLKTCNLLLSSLVKANELHKSY 241

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           + F  +  +G  P+  TF   I       RV D+V +  +M  LG+   +  Y  +I  L
Sbjct: 242 EVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGL 300

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            +  + EEA+R    M    + P  +TY  LI+ L +    ++AN++L +M  +G  P +
Sbjct: 301 FKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNE 360

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGK-------- 388
            VF  ++ G C  G   E++   ++      K  +VT   N LL+  C + +        
Sbjct: 361 VVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVT--FNTLLQGFCRSNQMEQAEQVL 418

Query: 389 ---------------------------FFLAKCILEKMADRKIADCDSWNIP-IRWLCEN 420
                                      F  A  I+ K+    I   DS   P +  LC+ 
Sbjct: 419 VYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKC 478

Query: 421 EEIRKAYELLGRMV-VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           E   +A EL  ++  V  +  +  T +A + G C+  N E+   V +Q+  + L+LD IS
Sbjct: 479 EGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRIS 538

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ G C+  KI EA ++   M +      + ++N L+ GL  M K+D   RL   A 
Sbjct: 539 YNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK 598

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS------MS 593
             G      TY  ++ G  K  R +D +     +  E   L    Y ILI +      ++
Sbjct: 599 EYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVT 658

Query: 594 EQNKLKD----------CALF-------------------FNVMVKAGLVPDRETMLSLL 624
           E  KL+D          CA +                   F  M   GL+P+     +L+
Sbjct: 659 EAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALI 718

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
            G     Q+ +V S + ++ S+    +   Y I+I+G  K G   +A  LL+ M+  G  
Sbjct: 719 GGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIA 778

Query: 685 PDATTHGLL 693
           PD  T+  L
Sbjct: 779 PDTVTYNAL 787



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 235/547 (42%), Gaps = 44/547 (8%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G    V  F   + A  +  R   D V ++ +M   G+ PNV T N +++ LF++ R E 
Sbjct: 250 GVAPDVFTFTTAINAFCKGGR-VGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEE 308

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL    RM +    P+  T+ ++I GL+     +++  +L EM+ +G       +  +I 
Sbjct: 309 ALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALID 368

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             CR+  + EA+R+   M    + P+ +T+  L+   C + +++ A  +L  ++  GL+ 
Sbjct: 369 GYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSV 428

Query: 341 -----------------------------------TDDVFVDIVRGLCEVGKFDESVNFL 365
                                              +D +   +V GLC+     E++  L
Sbjct: 429 NMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIE-L 487

Query: 366 EDKCGYV------TSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLC 418
             K   V      T   NALL   C  G       +L++M ++ +  D  S+N  I   C
Sbjct: 488 WFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCC 547

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +  +I +A++L   MV     PD  TY+  + G   +   +D  R+  +      V +  
Sbjct: 548 KWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVY 607

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ L+EG C+ ++I +AV+ F  +      LSS  +NILI   C +  V +A +LR   
Sbjct: 608 TYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S G   T +TY+ ++ G+  + R  +   +  +M  EG   +V  Y  LI    +  ++
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQM 727

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                    M   G+ P++ T   ++ G      +      +N+++ +    D+  YN L
Sbjct: 728 DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNAL 787

Query: 659 INGLWKE 665
             G  KE
Sbjct: 788 QKGYCKE 794



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 244/568 (42%), Gaps = 36/568 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L  +G  EE       MV+ +  P+V    + L+   +       A  VLV 
Sbjct: 292 TYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGV-LISGLMKLEMFEEANEVLVE 350

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S GF  +  VFN ++      K    + + V  EM   G+ PN  T N LL+    +N
Sbjct: 351 MYSMGFAPNEVVFNALIDGYCR-KGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSN 409

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           ++E A      +   G   N      VI  L+  S    ++ I+ ++    I++  S  T
Sbjct: 410 QMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLT 469

Query: 277 CIIPMLCRENKLEEAIRL-FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
            ++  LC+     EAI L FK+     L  + +T   L++ LCE   +++  ++L+ M+ 
Sbjct: 470 PLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLE 529

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            GL                          L D+  Y     N L+  CC  GK   A  +
Sbjct: 530 KGL--------------------------LLDRISY-----NTLIFGCCKWGKIEEAFKL 558

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            E+M  ++   D  ++N  ++ L +  +I   + LL        VP+  TY+  + G CK
Sbjct: 559 KEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCK 618

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               EDA++ F+ +  + + L S+ Y+ L+   C++  +TEA ++   M   G   + ++
Sbjct: 619 ADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCAT 678

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           ++ LI+G+C + +VD+A  +     + G       YT ++ G  KL +   +  +L +M 
Sbjct: 679 YSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMS 738

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   +   Y I+I    +   +K+     N M++ G+ PD  T  +L  G     +L 
Sbjct: 739 SNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELT 798

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGL 662
           +     +K      + +   YN LI+ L
Sbjct: 799 VTLQSDHKSNIGLPLEEEITYNTLIHKL 826



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 40/349 (11%)

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++   I   C+   +  A +L  +M    V P+  TY+  + G  K   +E+ALR 
Sbjct: 253 PDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALR- 311

Query: 465 FRQVSAQSLVLDSI-SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           F+    +S V  S+ +Y  L+ GL ++E   EA EV   M   G + +   FN LI G C
Sbjct: 312 FKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYC 371

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               + +A+R+R      G      T+  ++ G  +  + +    VL  +L  G +++++
Sbjct: 372 RKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMD 431

Query: 584 AYCILIQSMSEQNKL------------------------------------KDCALFFNV 607
               +I  + E++                                      +   L+F +
Sbjct: 432 VCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKL 491

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
               GL  +  T  +LLHGL +   +  V   + +++    +LD   YN LI G  K G 
Sbjct: 492 AAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGK 551

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFDSSSF 714
             +A  L + M+ + + PD  T+  L+   + +G+  D  R   ++  +
Sbjct: 552 IEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEY 600


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 237/513 (46%), Gaps = 6/513 (1%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           V   M   GFK +   +N ++   +   + + + V + +EM   G+ P+  T   LL  L
Sbjct: 256 VFQQMIDNGFKPNNYTYNCLIHGYLSIGK-WKEVVQMLEEMSARGLKPDCYTYGSLLNYL 314

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +  R   A   F  M +KG  P   T+ I+I G      + +  S L  M + G+  + 
Sbjct: 315 CKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDH 374

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             +        +   +++A+ +F  MR   L P+ + Y  LI+ LC+  R+DDA      
Sbjct: 375 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 434

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGK 388
           MI  G+TP   VF  +V GLC V K++ +   + +       P+    N L+   CN G+
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
               + +++ M    +  D  S+   I   C      +A ++   MV   + P   TY+ 
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G C     +DA  +FR++  + +    ++Y+ ++ GL Q ++ +EA E++  M  +G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                 ++NI++ GLC    VD+A ++     S G      T+T ++  L+K  R +D +
Sbjct: 615 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            + A +   G   +V  Y ++ +++ E+  L++    F+ M K G  P+ + + +L+  L
Sbjct: 675 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 734

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                +    + ++KL   +  +++S  ++L++
Sbjct: 735 LHRGDISRAGAYLSKLDERNFSVEASTTSLLMS 767



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 228/544 (41%), Gaps = 8/544 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+++     N +L  +   KR       + + M + G +P+  +   LL+ L    R E 
Sbjct: 120 GWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEE 179

Query: 221 ALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           AL+    M   H + C PN  ++ IVI G     +VD   ++  EM D GI  ++  YT 
Sbjct: 180 ALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTT 239

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC+    + A  +F+ M      P+  TY  LI+      +  +   +LE+M   G
Sbjct: 240 VIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           L P    +  ++  LC+ G+  E+  F +        P    +  L+      G      
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMH 359

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             L+ M +  ++ D   +NI      +   I KA ++  +M    + P+   Y A +   
Sbjct: 360 SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CKL   +DA   F Q+  + +  + + ++ LV GLC V+K   A E+   M   G   ++
Sbjct: 420 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNA 479

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             FN LI  LC + +V +  RL  L    G      +YT ++ G     R  +   V   
Sbjct: 480 VFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDG 539

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+  G +     Y  L+      +++ D    F  M++ G+ P   T  ++LHGL    +
Sbjct: 540 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 599

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                     +++     D   YNI++NGL K     +A  +   +  KG   +  T  +
Sbjct: 600 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 659

Query: 693 LVGS 696
           ++G+
Sbjct: 660 MIGA 663



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 186/447 (41%), Gaps = 10/447 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI-LEDM 333
           Y+ +I   CR   LE     F ++       D +   +L+  LC   R+ +A D+ L+ M
Sbjct: 93  YSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRM 152

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---DKCGYVTSPHNALLECCCNA---- 386
             +G  P    +  +++GLC   + +E++  L    D  G    P+        N     
Sbjct: 153 PELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTE 212

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G+      +  +M DR I  D  ++   I  LC+ +   +A  +  +M+ +   P+  TY
Sbjct: 213 GQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTY 272

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  + G   +  +++ +++  ++SA+ L  D  +Y  L+  LC+  +  EA   F  M +
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G     S++ ILI+G      + +      L   +G S     +        K      
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            + +  +M   G + +V  Y  LI ++ +  ++ D  + FN M+  G+ P+     SL++
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL    +       + +++      ++  +N LI  L   G   +   L+DLM   G  P
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 512

Query: 686 DATTHGLLV-GSSVGEEIDSRRFAFDS 711
           DA ++  L+ G  +    D     FD 
Sbjct: 513 DAFSYTPLISGYCLTGRTDEAEKVFDG 539



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 4/261 (1%)

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           V P+  TYS  +   C++ + E     F  +      +D I+ ++L++GLC  +++ EA+
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 498 EVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA---YSSGTSYTTSTYTKI 553
           +V    M + GC   + S+ IL+ GLC  ++ ++A+ L  +    +         +Y+ +
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G     +      +  +M+  G   DV  Y  +I  + +          F  M+  G 
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+  T   L+HG     +   V   + ++ +     D   Y  L+N L K G   +A +
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
             D M+ KG  P  +T+G+L+
Sbjct: 326 FFDSMIRKGIKPKVSTYGILI 346


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 154/684 (22%), Positives = 295/684 (43%), Gaps = 62/684 (9%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV---KERY--PNVRE 132
           ++L+ FK  S Q +F+    +YCK++  L  A   +E+      +V   K  Y    V +
Sbjct: 114 ASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWD 173

Query: 133 ALISL---------VFS-----FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE 178
            L+S+         VF      F        A+ V  NM   G   S+   N +L  +V+
Sbjct: 174 ELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQ 233

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
               F   + VY++M+  GI+P++ +   ++    +  R++ A +  + M +  C PN  
Sbjct: 234 NGEAFKALL-VYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV 292

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +I G ++   V  +  +L  M + GI      YT +I   C+  ++E+A +L   M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM 352

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
              +L  DE  Y  LI+  C   R+DDA  I + M+ +GL     +   ++ G C++G  
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           +++   L     +   P    +N LL+  C    F  A  + ++M ++ +     ++N  
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTL 472

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           ++ L     +  A  +   M    V P+  TY   +    K+  ++ A+ +++   ++  
Sbjct: 473 LKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
                 Y+ ++ G C++EK+ +A E+F  M + G      ++  LI G C +  + +A++
Sbjct: 533 TKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALK 592

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L+ ++   G S +T  Y  ++ G+ + +  + L  +LA+M     + +V  Y  LI    
Sbjct: 593 LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWC 652

Query: 594 EQNKLKDCALFFNVMVKAGLVPD------------RETMLS----LLHGLADGSQLHLVS 637
           ++  +      +  M+  G+ P+            R   +     +LH +AD   +   +
Sbjct: 653 DKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHA 712

Query: 638 SGINKLVSDSEVLDSS-------------------MYNILINGLWKEGLTSQASYLLDLM 678
             +    SD   L++                    +YNI I GL K         +L  +
Sbjct: 713 HSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDL 772

Query: 679 LGKGWVPDATTHGLLVG--SSVGE 700
           L KG+ PD  T+  L+   S+VG+
Sbjct: 773 LLKGFCPDNYTYCSLIHACSAVGK 796



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/512 (23%), Positives = 204/512 (39%), Gaps = 121/512 (23%)

Query: 140 SFVNHY----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK---E 192
           S +N Y     VN A  VLV+M     K     +N +L    +++    DF+  +K   E
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQE----DFIKAFKLCDE 456

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M   G+   V T N LL+ LF    +E AL  +  MHK+G  PN  T+  ++        
Sbjct: 457 MHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGT 516

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            D ++ I  +    G    ++ Y  +I   C+  KL +A  +F  M+ L   PDE+TY  
Sbjct: 517 FDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRT 576

Query: 313 LINCLC------ENLRLDDA-----------------------------NDILEDMIVIG 337
           LI+  C      E L+L D                              N +L +M    
Sbjct: 577 LIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRE 636

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAK 393
           L+P    +  ++ G C+ G  D++ N          +P+    + ++      GK   A 
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEAN 696

Query: 394 CILEKMAD-----------------------RKIADCDS-------------WNIPIRWL 417
            IL ++AD                       +KI D                +NI I  L
Sbjct: 697 LILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGL 756

Query: 418 CENEEI-----------------------------------RKAYELLGRMVVSSVVPDC 442
           C+++ I                                    +A+ L   M+ + +VP+ 
Sbjct: 757 CKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNI 816

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             Y+A + G CK  N + A R+F +++ + L    ++Y+ L++G C+  + TEA+E+   
Sbjct: 817 VVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDK 876

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           M + G   SS +++ LI+GL +  K ++++ L
Sbjct: 877 MREEGICPSSITYSTLIHGLYMEGKSEQSVGL 908



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 124/546 (22%), Positives = 225/546 (41%), Gaps = 34/546 (6%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V+ V++ A     R   D + +   M+K G+  N    N L+    +   +  A +    
Sbjct: 363 VYGVLIHAYCTAGR-VDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M      P+S  +  ++ G         +  +  EM + G+   +  Y  ++  L     
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGH 481

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E A+ ++ +M    + P+E+TY  L++   +    D A  I +D +  G T +  ++  
Sbjct: 482 VEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNT 541

Query: 348 IVRGLCEVGKFDES---------VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
           ++ G C++ K  ++         + F  D+  Y T     L++  C  G    A   L+ 
Sbjct: 542 MICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRT-----LIDGYCKVGNLVEA-LKLKD 595

Query: 399 MADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           M++R    +  + +N  I  +  +EE++K   LL  M    + P+  TY + + G C   
Sbjct: 596 MSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKG 655

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF--------CCMSKNGC 508
             + A   + ++  + +  + I  SK+V  L +  KI EA  +              +  
Sbjct: 656 MMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSV 715

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
            L  S    L     V     KA+   S+  S+   Y  +     + GL K +   D+  
Sbjct: 716 ELPKSDLRHLETQKIVDSFGKKAM---SIPISNNIVYNIA-----ITGLCKSKNIDDVRR 767

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L+ +L++G   D   YC LI + S   K+ +     + M+ AGLVP+     +L++GL 
Sbjct: 768 ILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLC 827

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               L       NKL           YN LI+G  K G T++A  L D M  +G  P + 
Sbjct: 828 KSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSI 887

Query: 689 THGLLV 694
           T+  L+
Sbjct: 888 TYSTLI 893



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 35/241 (14%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL V+ Q+ A  ++ D  SY+ +V   C+  ++ EA      M ++ C  +  ++N LI 
Sbjct: 240 ALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLID 299

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G   +  V  A ++ +L    G    + TYT ++ G  K  + +    ++  M+ +   +
Sbjct: 300 GYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFV 359

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D   Y +LI +     ++ D     + M+K GL                           
Sbjct: 360 DEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLK-------------------------- 393

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
                    +++ + N LING  K G  ++A+ +L  M      PD+  +  L+     +
Sbjct: 394 ---------MNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQ 444

Query: 701 E 701
           E
Sbjct: 445 E 445


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 254/564 (45%), Gaps = 27/564 (4%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY-KEMVK 195
           LV ++V   +V  A   ++ M+  GFK S    N +L A+VE+  G + +V+++ +E + 
Sbjct: 159 LVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQ--GESKYVWLFLRESLA 216

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVD 254
                +V T N LL  L        A D  ++M  K C   NS T+  ++   +   R  
Sbjct: 217 HNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KTCRLSNSVTYNTILHWYVKKGRFK 274

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ +L +M    I  ++  Y  +I  LCR  +   A  L K MR  DL+PDE TY  LI
Sbjct: 275 AALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLI 334

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N      +++ A+ +   M+     P+   +  ++ G C   + D++++ L +       
Sbjct: 335 NGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVM 394

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR--WLCENEEIRKAYELLG 431
           P            +   AK IL+ M +  I  D  +++  I    + E E  R   + + 
Sbjct: 395 P-----------SEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFR---QYMS 440

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           RM +S    D  +++  +   C   N  +A  V+  +       +  +Y  L+ GLCQ  
Sbjct: 441 RMKISF---DSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGG 497

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + +A +   C+     ++   +FN L+ G+C    +D+A+ L      +       TYT
Sbjct: 498 HLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYT 557

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN-VMVK 610
            ++ G  +  +    L++L  ML +G   D  AY  L+  +  + ++K  +  F  ++ K
Sbjct: 558 ILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICK 617

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            GL  D     SL++G   G  ++ +   ++ +       +S+ YNIL++G  K G  S+
Sbjct: 618 EGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSK 677

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           + YL   M+ KG  PD  T+ LL+
Sbjct: 678 SLYLYKYMVRKGIRPDNVTYRLLI 701



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 161/755 (21%), Positives = 291/755 (38%), Gaps = 153/755 (20%)

Query: 83  FKWVSIQKRFQHTAD---TYCKMILK-LGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           + W+ +++   H      T C ++L  L   G   + E + Q M   R  N      S+ 
Sbjct: 206 YVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSN------SVT 259

Query: 139 FSFVNHY-----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
           ++ + H+     R   A+ VL +M        +  +N+++  +   KR    F+ + K M
Sbjct: 260 YNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLL-KRM 318

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            K  ++P+  T N L+   F   +I  A   F  M ++   P+  T+  +I G   N R+
Sbjct: 319 RKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRI 378

Query: 254 DDSVSILGEMFDLGI--------------------------------------------- 268
           D ++S+L EM   G+                                             
Sbjct: 379 DKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQY 438

Query: 269 --QLELSF----YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
             ++++SF    + CII   C    + EA  ++  M      P+  TY+ L+  LC+   
Sbjct: 439 MSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGH 498

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNA 378
           L  A   +  ++ I     +  F  ++ G+C+ G  DE+++  E    + C      +  
Sbjct: 499 LVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTI 558

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI---------------------------------- 404
           LL   C  GK   A  +L+ M D+ +                                  
Sbjct: 559 LLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 618

Query: 405 ---ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
              ADC ++N  +    +   I     ++  M  S V P+ A+Y+  + G  K   +  +
Sbjct: 619 GLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKS 678

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           L +++ +  + +  D+++Y  L+ GL +   I  AV+    M   G       F+ILI  
Sbjct: 679 LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITA 738

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                K+  A++L +       S ++ TY+ ++ GL++         VL +ML  G   +
Sbjct: 739 FSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPN 798

Query: 582 VEAYCIL-----------------------------------IQSMSEQNKLKDCALFFN 606
              Y  L                                   I+ + +  KL++  + F+
Sbjct: 799 HTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFS 858

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEV-LDSSMYNILING 661
            M+++G+VP   T  +L+H L   S+    LHL      +L+    + +D   YN+LI G
Sbjct: 859 TMMRSGMVPTVATFTTLMHCLCKESKIADALHL-----KRLMESCRLKVDVVSYNVLITG 913

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           L K+   S A  L + M  KG  P+ TT+  L G+
Sbjct: 914 LCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGA 948



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 196/453 (43%), Gaps = 41/453 (9%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N LL  + +   ++ ALD   +M K  C P+  T+ I++ G     ++  ++ +L  M
Sbjct: 520 TFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMM 579

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDELTYEELINCLCENLR 322
            D G+  +   YTC++  L  E +++ A  +F+ +   + L  D + Y  L+N   +   
Sbjct: 580 LDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGN 639

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----- 377
           ++    ++ DM    + P    +  ++ G  + G+F +S+   +        P N     
Sbjct: 640 INTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRL 699

Query: 378 ---ALLEC-CCNAGKFFLAKCILEKM-ADRKIAD--------------------CDSW-- 410
               L EC   +    FL K +LE +  DR + D                    C  W  
Sbjct: 700 LILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLR 759

Query: 411 --------NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
                   +  I  L     + +++E+L  M+   + P+   Y A V  KC++   + A 
Sbjct: 760 MSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAF 819

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           R+  ++ A  +V   ++ S ++ GLC+  K+ EAV VF  M ++G   + ++F  L++ L
Sbjct: 820 RLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCL 879

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   K+  A+ L+ L  S        +Y  ++ GL K +R  D L +  +M  +G   +V
Sbjct: 880 CKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNV 939

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
             Y  L  +M     +++       + + GL+P
Sbjct: 940 TTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 112/515 (21%), Positives = 199/515 (38%), Gaps = 94/515 (18%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N   FE+++K  +   +V D+   +  M D G +        I+  L  + + +      
Sbjct: 152 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFL 211

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           +   A +   D  T   L+N LC N     A D+L+ M                    + 
Sbjct: 212 RESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--------------------KT 251

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
            +   SV +            N +L      G+F  A C+LE M    I AD  ++NI I
Sbjct: 252 CRLSNSVTY------------NTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMI 299

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC  +   +A+ LL RM    ++PD  TY+  + G         A  VF  +  Q+ V
Sbjct: 300 DKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFV 359

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
               +Y+ +++G C+  +I +A+ V   M   G   S               ++ KA ++
Sbjct: 360 PSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPS---------------EISKAKQI 404

Query: 535 RSLAYSSGTSYTTSTYTKIM-LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                  G      TY+ ++  G++    A+     +++M +   + D  ++  +I S  
Sbjct: 405 LKSMLEDGIDPDIVTYSALINEGMI--TEAEHFRQYMSRMKI---SFDSVSFNCIIDSYC 459

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS--------------- 638
            +  + +    ++ MV+ G  P+  T  +LL GL  G   HLV +               
Sbjct: 460 HRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGG--HLVQAKQFMFCLLDIPSAID 517

Query: 639 ---------GI-------------NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                    GI              K+V ++ + D   Y IL++G  ++G    A  +L 
Sbjct: 518 EKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQ 577

Query: 677 LMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFD 710
           +ML KG VPD   +  L+   + E ++ +  + F 
Sbjct: 578 MMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQ 612



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 161/366 (43%), Gaps = 6/366 (1%)

Query: 3   IKLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLS 62
           +K +S      I K      CI+  S  N        + IK   +  Y++++    ++ S
Sbjct: 604 VKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYP--NSAS 661

Query: 63  PDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM 122
            + L+         S +L ++K++ ++K  +    TY  +IL L   G ++      + M
Sbjct: 662 YNILMHGYVKGGQFSKSLYLYKYM-VRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 720

Query: 123 VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           V E     R     L+ +F    +++ A+++   M       S   ++ ++  ++  ++ 
Sbjct: 721 VLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLI--RKN 778

Query: 183 FADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           + D    V +EM++ G+ PN      L+       +I+ A      M   G  P      
Sbjct: 779 YLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAES 838

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I+GL    +++++V +   M   G+   ++ +T ++  LC+E+K+ +A+ L ++M + 
Sbjct: 839 SIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESC 898

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            L  D ++Y  LI  LC++ R+ DA D+ E+M   GL P    ++ +   +   G     
Sbjct: 899 RLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNG 958

Query: 362 VNFLED 367
              LED
Sbjct: 959 EELLED 964



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 1/160 (0%)

Query: 182 GFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           G  D  F  KE +KA GIVP     + ++  L +  ++E A+  F  M + G  P   TF
Sbjct: 813 GKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATF 872

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L   S++ D++ +   M    +++++  Y  +I  LC++ ++ +A+ L++ M++
Sbjct: 873 TTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKS 932

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             L P+  TY  L   +     + +  ++LED+   GL P
Sbjct: 933 KGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 110/253 (43%), Gaps = 8/253 (3%)

Query: 64  DHLIRVLDNTNDLSSALKIF---KWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           D LI      + + +AL++F   KW+    R   ++ TY  MI  L     +++   + +
Sbjct: 733 DILITAFSEKSKMHNALQLFNCMKWL----RMSPSSKTYSAMINGLIRKNYLDQSHEVLR 788

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M++          I+LV +     +++ A R+   M + G  +  DV    +   + + 
Sbjct: 789 EMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGI-VPADVAESSIIRGLCKC 847

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
               + V V+  M+++G+VP V T   L+  L + ++I  AL   R M       +  ++
Sbjct: 848 GKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSY 907

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            ++I GL  + R+ D++ +  EM   G+   ++ Y  +   +     ++    L + +  
Sbjct: 908 NVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEE 967

Query: 301 LDLMPDELTYEEL 313
             L+P  +  E L
Sbjct: 968 RGLIPVYVQLENL 980


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 214/445 (48%), Gaps = 6/445 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +++K G  PN  T + L+  L    R+  AL+   RM + G  P+  T   ++ GL  + 
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 305

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +  +++ ++ +M + G Q     Y  ++ ++C+  +   A+ L + M   ++  D + Y 
Sbjct: 306 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 365

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+ LC++  LD+A ++  +M + G+T     +  ++ G C  G++D+    L D    
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
             +P+    + L++     GK   A+ + ++M  R IA D  ++   I   C+   + KA
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +++  MV     P+  T++  + G CK    +D L +FR++S + +V D+++Y+ L++G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++ K+  A E+F  M       +  ++ IL+ GLC   + +KA+ +      S     
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y  I+ G+    +  D   +   + ++G    V+ Y I+I  + ++  L +  L F 
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665

Query: 607 VMVKAGLVPDRETMLSLLHG-LADG 630
            M + G  PD  T   L+   L DG
Sbjct: 666 KMEEDGHAPDGWTYNILIRAHLGDG 690



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 211/485 (43%), Gaps = 5/485 (1%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           + + A+D FR M      P    F  +   +    + D  +++  +M   GI   L   +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CR  KL  A      +  L   P+ +T+  LIN LC   R+ +A ++++ M+ +
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G  P       +V GLC  GK  E++  ++    Y   P    +  +L   C +G+  LA
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L KM +R I  D   ++I I  LC++  +  A+ L   M +  +  +  TY+  + G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C    ++D  ++ R +  + +  + +++S L++   +  K+ EA E+   M   G +  
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           + ++  LI G C    +DKA ++  L  S G      T+  ++ G  K  R  D L +  
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M + G   D   Y  LIQ   E  KL      F  MV   + P+  T   LL GL D  
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +         K+      LD  +YNI+I+G+        A  L   +  KG  P   T+ 
Sbjct: 586 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 645

Query: 692 LLVGS 696
           +++G 
Sbjct: 646 IMIGG 650



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 246/532 (46%), Gaps = 8/532 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           F+ +  AI + K+   D V    K+M   GI  N+ TL+ ++       ++  A     +
Sbjct: 189 FSRLFSAIAKTKQ--YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 246

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + K G  PN+ TF  +I GL    RV +++ ++  M ++G + +L     ++  LC   K
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             EA+ L   M      P+ +TY  ++N +C++ +   A ++L  M    +      +  
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366

Query: 348 IVRGLCEVGKFDESVN-FLEDKCGYVTS---PHNALLECCCNAGKFFLAKCILEKMADRK 403
           I+ GLC+ G  D + N F E +   +T+    +N L+   CNAG++     +L  M  RK
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I  +  ++++ I    +  ++R+A EL   M+   + PD  TY++ + G CK  + + A 
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++   + ++    +  +++ L+ G C+  +I + +E+F  MS  G    + ++N LI G 
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 546

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C + K++ A  L     S        TY  ++ GL     ++  L +  ++      LD+
Sbjct: 547 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 606

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y I+I  M   +K+ D    F  +   G+ P  +T   ++ GL     L        K
Sbjct: 607 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  D    D   YNILI     +G  +++  L++ +   G+  DA+T  +++
Sbjct: 667 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 19/341 (5%)

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           N  EM+G+  N++             L+  F N  R +   ++L +M       +V  F+
Sbjct: 385 NEMEMKGITTNIITYNI---------LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 435

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           V++ + V+E +   +   ++KEM+  GI P+  T   L++   + N ++ A      M  
Sbjct: 436 VLIDSFVKEGK-LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 494

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           KGC PN RTF I+I G    +R+DD + +  +M   G+  +   Y  +I   C   KL  
Sbjct: 495 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 554

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A  LF+ M +  + P+ +TY+ L++ LC+N   + A +I E +    +     ++  I+ 
Sbjct: 555 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 614

Query: 351 GLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRK 403
           G+C   K D++ +          K G  T  +N ++   C  G    A+ +  KM  D  
Sbjct: 615 GMCNASKVDDAWDLFCSLPLKGVKPGVKT--YNIMIGGLCKKGPLSEAELLFRKMEEDGH 672

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             D  ++NI IR    + +  K+ +L+  +       D +T
Sbjct: 673 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 713



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 110/275 (40%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A +L   M+ S  +P    +S       K   Y+  L + +Q+  + +  +  + S ++ 
Sbjct: 170 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 229

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  K+  A      + K G   ++ +F+ LI GLC+  +V +A+ L       G   
Sbjct: 230 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 289

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              T   ++ GL    +  + ++++ +M+  GC  +   Y  ++  M +  +        
Sbjct: 290 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 349

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M +  +  D      ++ GL     L    +  N++       +   YNILI G    
Sbjct: 350 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 409

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           G     + LL  M+ +   P+  T  +L+ S V E
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 444


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 229/514 (44%), Gaps = 44/514 (8%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F F+ + MV  G +P++     L+       + + A      + + G  P+  T+ ++I 
Sbjct: 134 FKFL-ESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLIS 192

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G   +  +D+++ +L  M    +  ++  Y  I+  LC   KL++A+ +       +  P
Sbjct: 193 GYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 249

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +TY  LI   C+   +  A  +L++M   G  P    +  ++ G+C+ G+ DE++ FL
Sbjct: 250 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 309

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
            +   Y   P    HN +L   C+ G++  A+ +L  M  +  +    ++NI I +LC  
Sbjct: 310 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 369

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             + +A ++L +M +    P+                                   S+SY
Sbjct: 370 GLLGRAIDILEKMPMHGCTPN-----------------------------------SLSY 394

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+ G C+ +K+  A+E    M   GC     ++N L+  LC   KVD A+ + +   S
Sbjct: 395 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 454

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G S    TY  ++ GL K+ + +  + +L +M  +G   D+  Y  L+  +S + K+ +
Sbjct: 455 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 514

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              FF+ +   G+ P+  T  S++ GL    Q       +  ++S       + Y ILI 
Sbjct: 515 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 574

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G+  EGL  +A  LL+ +  +G V  ++   + V
Sbjct: 575 GIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 608



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 215/447 (48%), Gaps = 9/447 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F    +   A  V+  +   G    V  +NV++      K G  D     + + +
Sbjct: 154 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC--KSGEIDNAL--QVLDR 209

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + P+V T N +L  L ++ +++ A++   R  +K C P+  T+ I+I+     S V  
Sbjct: 210 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 269

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L EM + G + ++  Y  +I  +C+E +L+EAI+    M +    P+ +T+  ++ 
Sbjct: 270 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 329

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            +C   R  DA  +L DM+  G +P+   F  ++  LC  G    +++ LE    +  +P
Sbjct: 330 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 389

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
               +N LL   C   K   A   L+ M  R    D  ++N  +  LC++ ++  A E+L
Sbjct: 390 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 449

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            ++      P   TY+  + G  K+   E A+++  ++  + L  D I+YS LV GL + 
Sbjct: 450 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 509

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+ EA++ F  +   G   ++ ++N ++ GLC  R+ D+AI   +   S     T +TY
Sbjct: 510 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 569

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           T ++ G+     AK+ L +L ++   G
Sbjct: 570 TILIEGIAYEGLAKEALDLLNELCSRG 596



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 40/254 (15%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ED  +    +  +  + D I  + L+ G C++ K  +A  V   + ++G      ++N+L
Sbjct: 131 EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVL 190

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C   ++D A+++         +    TY  I+  L    + K  + VL + L + C
Sbjct: 191 ISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 247

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y ILI++  +++ +       + M   G  PD  T                   
Sbjct: 248 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT------------------- 288

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-- 696
                           YN+LING+ KEG   +A   L+ M   G  P+  TH +++ S  
Sbjct: 289 ----------------YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332

Query: 697 SVGEEIDSRRFAFD 710
           S G  +D+ +   D
Sbjct: 333 STGRWMDAEKLLSD 346



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 3/203 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF-VFVYKEMVK 195
           L+  F    +++ A+  L  M S G    +  +N +L A+   K G  D  V +  ++  
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC--KDGKVDVAVEILNQLSS 454

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P + T N +++ L +  + E A+     M +KG  P+  T+  ++ GL    +VD+
Sbjct: 455 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 514

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++    ++  LGI+     Y  I+  LC+  + + AI     M +    P E TY  LI 
Sbjct: 515 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 574

Query: 316 CLCENLRLDDANDILEDMIVIGL 338
            +       +A D+L ++   GL
Sbjct: 575 GIAYEGLAKEALDLLNELCSRGL 597


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 247/528 (46%), Gaps = 14/528 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
            N+VL  +     G  + + + +EM +  + P++ + N L+  L +  +++ A+     M
Sbjct: 1   MNIVLKGLCRNG-GVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 59

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              GC PNS T   ++ GL  + R+D+++ +L  M   G   ++  Y  +I   C    L
Sbjct: 60  EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +    LF  M    +  + +TY  L++ LC   +  +AN +L  M   G+ P    +  +
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-K 403
           + GLC+ G+   +++ L         P    +N LL   C  G    A  IL  M ++ K
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS--VVPDCATYSAFVLGKCKLCNYEDA 461
            AD  ++N  ++ LC+  ++ +A +L   M  +   + P+  T++  + G CK      A
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           +++ R++  +    + ++Y+ L+ G  +  KI EA+E++  +   G   +S +++ILI G
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGC 578
            C MR ++ A  L     + G +     Y  +M  L K   L++AK L     +M    C
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSL---FQEMGNANC 416

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D+ ++  +I    +    +        MV+ GL PD  T  +L++ L+   +L    S
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 476

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            + ++V+     D+ +Y+ L+ GL  +G T++   LL  M  KG V D
Sbjct: 477 ALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 524



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 206/464 (44%), Gaps = 42/464 (9%)

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           IV+KGL  N  V +++ ++ EM    +  ++  Y  +I  LC+  KL+EA+ L   M A 
Sbjct: 3   IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+ +T   L++ LC++ R+D+A ++LE M   G      ++  ++ G C  G  D  
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
               ++  G   S     ++ L+   C  G++  A  +L  MA+  I  D  ++   I  
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC++     A +LL  MV     P   TY+  + G CK     DA ++ R +  +    D
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS--SFNILIYGLCVMRKVDKAIRL 534
            ++Y+ L++GLC   K+ EA+++F  M  N   L  +  +FN+LI GLC   ++ KA+++
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G+     TY  ++ G +K  + K+ + +  Q+L  G   +   Y ILI    +
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
                                    ML++  GL    + H    G+N  + D        
Sbjct: 363 MR-----------------------MLNIAKGLFCEMRTH----GLNPALFD-------- 387

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
           YN L+  L KEG   QA  L   M      PD  +   ++  ++
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTL 431



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 166/359 (46%), Gaps = 9/359 (2%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N +L+  C  G  F A  ++ +M  + ++ D  S+N  I  LC+ +++++A  LL  M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           +   P+  T +  + G CK    ++A+ +   +  +    D + Y  L+ G C    +  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
             E+F  M   G S +  +++ L++GLC + +  +A  + +     G      TYT ++ 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL K  RA   + +L  M+ +G       Y +L+  + ++  + D      +M++ G   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM--YNILINGLWKEGLTSQASY 673
           D  T  +L+ GL D  ++       N +  +   L+ ++  +N+LI GL KEG  ++A  
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 674 LLDLMLGKGWVPDATTHGLLVG-----SSVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
           +   M+ KG   +  T+ +L+G       + E ++  +   D    P+S +  IL +G 
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 175/395 (44%), Gaps = 12/395 (3%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           +P+V      L+       R   AM +L  M   G + S   +NV+L  + +E     D 
Sbjct: 170 HPDVV-TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL-VIDA 227

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC--PNSRTFEIVI 244
             + + M++ G   +V T N L++ L +  +++ AL  F  M     C  PN  TF ++I
Sbjct: 228 FKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLI 287

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GL    R+  +V I  +M   G    L  Y  ++    +  K++EA+ L+K +  L  +
Sbjct: 288 GGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFV 347

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+  TY  LI+  C+   L+ A  +  +M   GL P    +  ++  LC+ G  +++ + 
Sbjct: 348 PNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSL 407

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
            ++       P     N +++    AG F   K +  KM +  +  D  +++  I  L +
Sbjct: 408 FQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 467

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             E+ +A   L RMV S   PD   Y + + G     +  + + +  Q++A+  VLD   
Sbjct: 468 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKI 527

Query: 480 YSKLVEGLC---QVEKITEAVEVFCCMSKNGCSLS 511
            S ++  LC   Q   + E +  F   +  G S+S
Sbjct: 528 VSTILTCLCHSIQEVDVMELLPTFFQGTSEGASIS 562



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 198/448 (44%), Gaps = 20/448 (4%)

Query: 115 MEGLCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGGF 162
           M+GLC++   +    + EA+             +L+  F N+  ++    +   M   G 
Sbjct: 75  MDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGI 134

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
             +V  ++ ++  +    + + +   V   M + GI P+V T   L++ L +  R   A+
Sbjct: 135 SANVVTYSCLVHGLCRLGQ-WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           D    M +KG  P++ T+ +++ GL     V D+  IL  M + G + ++  Y  ++  L
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253

Query: 283 CRENKLEEAIRLFKMMRALD--LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           C + K++EA++LF  M   +  L P+  T+  LI  LC+  RL  A  I   M+  G   
Sbjct: 254 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 313

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNAGKFFLAKCIL 396
               +  ++ G  + GK  E++   +     G+V +   ++ L++  C      +AK + 
Sbjct: 314 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 373

Query: 397 EKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M    +      +N  +  LC+   + +A  L   M  ++  PD  +++  + G  K 
Sbjct: 374 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 433

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            +++    +  ++    L  D++++S L+  L ++ ++ EA      M  +G +  +  +
Sbjct: 434 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 493

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + L+ GL       + I L     + GT
Sbjct: 494 DSLLKGLSSKGDTTEIINLLHQMAAKGT 521


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 224/510 (43%), Gaps = 9/510 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           ++ +  +  +P +  LN LL  L              RM  +    N RT+  +I     
Sbjct: 29  HRVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCL 84

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +  +   L  +   G+  +   YT  +   CR   L  A R+F +M     +    T
Sbjct: 85  AGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFT 144

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++ L     + +A  +   M      P   V+  +V GLCE G+ +E+   LE+  
Sbjct: 145 YTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIR 424
                P    +NAL++  CNAG+   A  + E M  +R   +  ++   I  LC++ ++ 
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  L  RMV + + P+  TY+A + G+C   + + A R+   +    LV +  ++S L+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           + LC+ EK+ EA      + K G  ++   +  LI GLC   K+D A  L     S G  
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               +Y+ ++ GL + ++     ++L  M+ +G       Y I+I  +  +   +     
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ M+  G+ PD  T    +    +  ++    S I ++V      +   YN LI G   
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            GL SQA    ++M+GKGW P+  ++ +L+
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 220/499 (44%), Gaps = 29/499 (5%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+   +    V  AM V V M +        V+  ++  + E  R     V + + M  
Sbjct: 147 ALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSN 206

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PN+   N L++       +E AL  F  M    C PN RT+  +I GL  + +V+ 
Sbjct: 207 -GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +   M + G++  +  YT +I   C E  L+ A RL  +M    L+P++ T+  LI+
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVT 373
            LC+  ++++A   L  ++  G+   + V+  ++ GLC+ GK D +   ++     G+V 
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385

Query: 374 SPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
             H  ++L++  C   K   A  +LE M ++ I A   ++ I I  L          ++ 
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M+ + + PD  TY+ FV   C+    EDA  +  Q+  + +  + ++Y+ L+ G   +
Sbjct: 446 DKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             +++A   F  M   G   +  S+ +L             +RL     SS  S      
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVL-------------LRLVVKKSSSDNS------ 546

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
               + + K+   KDL V+L  +      L  + Y   I+ +   ++L++   FF  M  
Sbjct: 547 ----VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQN 602

Query: 611 AGLVPDRETMLSLLHGLAD 629
           A L P  +   S++   AD
Sbjct: 603 ANLTPSEDVYTSIIDCCAD 621



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 180/450 (40%), Gaps = 14/450 (3%)

Query: 293 RLFKMMRAL-DLMPDE--LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           R+F  M +L   MP     TY  LIN  C    +  A   L  ++  GL P    +   V
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114

Query: 350 RGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKI 404
            G C  G    +           C      + ALL     AG    A  +   M AD   
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCA 174

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D   +   +  LCE     +A  LL   + +   P+   Y+A + G C     E AL+V
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +       +  +Y++L+ GLC+  K+  A+ +F  M + G   +  ++  LI G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              +  A RL  L  ++G      T++ ++  L K ++ ++  + L  ++ +G  ++   
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  LI  + +  K+         M+  G VPD  +  SL+ GL    +L   +  +  ++
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEI 702
                     Y I+I+ L +E  +     + D M+  G  PD  T+ + V S    G   
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 703 DSRRF---AFDSSSFPDSVS-DILAEGLGN 728
           D+        D   FP+ V+ + L  G  N
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/291 (19%), Positives = 124/291 (42%), Gaps = 17/291 (5%)

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
            VEE +    ++VK+          SL+       +++ A  ++  M S GF      ++
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            ++  +  +K+  +    + ++M++ GI  +  T   +++ L      E     F +M  
Sbjct: 392 SLIDGLCRQKK-LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            G  P+  T+ + ++      R++D+ S++ +M D G+   L  Y  +I        + +
Sbjct: 451 TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQ 510

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI------------LEDMIVIGL 338
           A   F++M      P+E +Y  L+  + +    D++ DI            LED+    L
Sbjct: 511 AFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQL 570

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
               D++   +R LC V + +E+ +F         +P    + ++++CC +
Sbjct: 571 PLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCAD 621


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 221/504 (43%), Gaps = 40/504 (7%)

Query: 45  HQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSI-QKRFQHTADTYCKMI 103
            Q    +  I+     L P  L+ ++    ++  AL+IF +       F H  DTY  ++
Sbjct: 31  QQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSIL 90

Query: 104 LKLGLAGNVEEMEGLCQNMVKERYPNVR---EALISLVFSFVNHYRVNGAMRVLVNMNSG 160
            KL  A   + +E L  ++ +  YP ++      I L+ ++    R   +MR+ + +   
Sbjct: 91  FKLSRARAFDPVESLMADL-RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF 149

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA--GIVPNVDTLNYLLEVLFETNRI 218
           G K SV   N +L  +++ +R   D V    +  K   GI PN+ T N L++ L + N I
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQR--FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           ESA      +   G  PN  T+  ++ G +A   ++ +  +L EM D G   + + YT +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +   C+  +  EA  +   M   ++ P+E+TY  +I  LC+  +  +A ++ ++M+    
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
            P   +   ++  LCE  K DE+             P NALL                  
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL--------------- 372

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
                          I WLC+   + +A +L       S +P   TY+  + G C+    
Sbjct: 373 ---------------IHWLCKEGRVTEARKLFDEFEKGS-IPSLLTYNTLIAGMCEKGEL 416

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +A R++  +  +    ++ +Y+ L+EGL +   + E V V   M + GC  + ++F IL
Sbjct: 417 TEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLIL 476

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSG 542
             GL  + K + A+++ S+A  +G
Sbjct: 477 FEGLQKLGKEEDAMKIVSMAVMNG 500



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 204/454 (44%), Gaps = 18/454 (3%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNR------IESALDQFRRMHKKGCCPNSRTF 240
           +F+Y      G   N DT +    +LF+ +R      +ES +   R  +    C     F
Sbjct: 68  IFLYAGKSHPGFTHNYDTYH---SILFKLSRARAFDPVESLMADLRNSYPPIKC-GENLF 123

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR- 299
             +++      R + S+ I   + D G++  +     ++ +L +  + +    +FK  + 
Sbjct: 124 IDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKE 183

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           +  + P+  T   L+  LC+   ++ A  +L+++  +GL P    +  I+ G    G  +
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243

Query: 360 ESVNFLE---DKCGYV-TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPI 414
            +   LE   D+  Y   + +  L++  C  G+F  A  +++ M   +I   + ++ + I
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           R LC+ ++  +A  +   M+  S +PD +     +   C+    ++A  ++R++   + +
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            D+   S L+  LC+  ++TEA ++F    K G   S  ++N LI G+C   ++ +A RL
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRL 422

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
               Y         TY  ++ GL K    K+ + VL +ML  GC  +   + IL + + +
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
             K +D     ++ V  G V D+E+    L   A
Sbjct: 483 LGKEEDAMKIVSMAVMNGKV-DKESWELFLKKFA 515



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 166/376 (44%), Gaps = 15/376 (3%)

Query: 342 DDVFVDIVRGLCEVGKFDESVN-FLE-DKCGYVTSPH--NALLECCCNAGKFFLAKCILE 397
           +++F+D++R     G+++ S+  FL     G   S    N LL       +F L   + +
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 179

Query: 398 KMADR-----KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              +       I  C   N+ ++ LC+  +I  AY++L  +    +VP+  TY+  + G 
Sbjct: 180 NSKESFGITPNIFTC---NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
               + E A RV  ++  +    D+ +Y+ L++G C++ + +EA  V   M KN    + 
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++ ++I  LC  +K  +A  +            +S   K++  L +  +  +   +  +
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML   C  D      LI  + ++ ++ +    F+   K G +P   T  +L+ G+ +  +
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGE 415

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L       + +       ++  YN+LI GL K G   +   +L+ ML  G  P+ TT  +
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475

Query: 693 LVG--SSVGEEIDSRR 706
           L      +G+E D+ +
Sbjct: 476 LFEGLQKLGKEEDAMK 491


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 147/602 (24%), Positives = 258/602 (42%), Gaps = 64/602 (10%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           AL  F W     +F+H    Y      L    N E+   + Q MVK              
Sbjct: 95  ALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVK-------------- 140

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAG 197
            SF    RV  A+ +++ M++ G   S    N V+  + E   G  ++   ++ EM   G
Sbjct: 141 -SFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTE--MGLVEYAENLFDEMCARG 197

Query: 198 IVPN---------------------------------VD--TLNYLLEVLFETNRIESAL 222
           + PN                                 VD  TL+ ++    E   +  AL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             FRR  + G  PN   F  +I+GL     V  +  +L EM   G +  +  +T +I  L
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 283 CRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           C++   E+A RLF K++R+ +  P+ LTY  +I+  C + +++ A  +L  M   GL P 
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
            + +  ++ G C+ G F+ +   +        SP    +NA+++  C  G+   A  +L 
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVL- 436

Query: 398 KMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           K   R   D D  ++ I I   C+  EI++A  L  +MV S + PD  +Y+  +   C+ 
Sbjct: 437 KSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCRE 496

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              +++   F +     LV  + +Y+ ++ G C+   +  A++ F  MS +GC+  S ++
Sbjct: 497 KRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITY 556

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI GLC   K+D+A  L       G +    T   +     K+      +VVL ++  
Sbjct: 557 GALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEK 616

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +   L V     L++ +  + K+   ALFF+ ++      +R T+ + +    + ++  L
Sbjct: 617 K---LWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKYDL 673

Query: 636 VS 637
           VS
Sbjct: 674 VS 675



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/488 (23%), Positives = 207/488 (42%), Gaps = 39/488 (7%)

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           + +  +++   E  R++ A++    MH +G  P+++T   V+K +     V+ + ++  E
Sbjct: 133 EVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDE 192

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G+Q     Y  ++   C+   + E+ R    M     + D  T   ++   CE   
Sbjct: 193 MCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGF 252

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
           +  A         +GL P    F  ++ GLC+ G   ++   LE+  G    P    H A
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS-S 437
           L++  C  G                      W              KA+ L  ++V S +
Sbjct: 313 LIDGLCKKG----------------------WT------------EKAFRLFLKLVRSEN 338

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P+  TY+A + G C+      A  +  ++  Q L  ++ +Y+ L++G C+      A 
Sbjct: 339 HKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAY 398

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E+   M++ G S +  ++N ++ GLC   +V +A ++    + +G      TYT ++   
Sbjct: 399 ELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEH 458

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K    K  LV+  +M+  G   D+ +Y  LI     + ++K+  +FF   V+ GLVP  
Sbjct: 459 CKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTN 518

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           +T  S++ G      L L     +++       DS  Y  LI+GL K+    +A  L D 
Sbjct: 519 KTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDA 578

Query: 678 MLGKGWVP 685
           M+ KG  P
Sbjct: 579 MIEKGLTP 586



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 198/473 (41%), Gaps = 32/473 (6%)

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
           + ++K      RV +++ ++ EM + G+         ++ ++     +E A  LF  M A
Sbjct: 136 QCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCA 195

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + P+ ++Y  ++   C+   + +++  L  MI  G    +     IVR  CE G    
Sbjct: 196 RGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTR 255

Query: 361 SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN 420
           ++ +    C     P+     C                               I  LC+ 
Sbjct: 256 ALWYFRRFCEMGLRPNLINFTCM------------------------------IEGLCKR 285

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF-RQVSAQSLVLDSIS 479
             +++A+E+L  MV     P+  T++A + G CK    E A R+F + V +++   + ++
Sbjct: 286 GSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 345

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ ++ G C+ EK+  A  +   M + G + +++++  LI G C     ++A  L ++  
Sbjct: 346 YTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMN 405

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G S    TY  I+ GL K  R ++   VL      G   D   Y ILI    +Q ++K
Sbjct: 406 EEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIK 465

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
              + FN MVK+G+ PD  +  +L+       ++        + V    V  +  Y  +I
Sbjct: 466 QALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMI 525

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS 711
            G  +EG    A      M   G   D+ T+G L+ G     ++D  R  +D+
Sbjct: 526 CGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDA 578


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 213/501 (42%), Gaps = 42/501 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV++G  P+  T N L+     T ++E A D F +M  +G   ++ ++  +I+G     R
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGR 214

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D+++ +  EM     Q ++  +  ++  LC   + EE + + + M+ L   P    Y  
Sbjct: 215 IDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAA 270

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----K 368
           L++  C   + ++A  IL +M   GL P       +V   C  G+   +V   E      
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
           C      +NA+++  CNAGK +                                  KA  
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVY----------------------------------KAMA 356

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL +M    V PD  TY+  + G+C   +   A R+ R +    L  D  +Y+ L++ LC
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  K+ EA  +F  +   G   +S +FN +I GLC   K D A        S+G +  T 
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTY 476

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY+  +  L K + +++ L  + +ML +        Y I+I  +  +         +  M
Sbjct: 477 TYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQM 536

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           V  G  PD  T  + +    +  +L    + + ++     ++D+  YN LI+G    G T
Sbjct: 537 VSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQT 596

Query: 669 SQASYLLDLMLGKGWVPDATT 689
            +A  +L  M G   +P+  T
Sbjct: 597 DRAVTILKHMTGVASMPNHFT 617



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 143/633 (22%), Positives = 271/633 (42%), Gaps = 57/633 (9%)

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG 149
           + F   A +Y  +I     AG ++E   L + M +   P++     +LV    +  R   
Sbjct: 193 RGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ---PDMYTH-AALVKGLCDAGRGEE 248

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
            + +L  M   G++ +   +  ++     E++   +   +  EM  +G++P V T   ++
Sbjct: 249 GLCMLQKMKELGWRPTTRAYAALVDLWCREQKA-EEAEKILNEMFDSGLMPCVVTCTIVV 307

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
                  R+  A+  F  M  KGC PN  T+  +++G     +V  ++++L +M + G++
Sbjct: 308 NAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVE 367

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++  Y  +I   C +  +  A RL ++M    L  D+ TY  LI+ LC+  ++D+A  +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
            + +   G+ P    F  ++ GLC+                               AGKF
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCK-------------------------------AGKF 456

Query: 390 FLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
            +A   LE M     A D  +++  I  LC+ +  ++    +  M+   V P    Y+  
Sbjct: 457 DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIV 516

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +       NY  A R++ Q+ +Q    D ++Y+  V   C   ++ EA  V   M K   
Sbjct: 517 INRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT 576

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
            + + ++N LI G   + + D+A+                T  K M G+  +       +
Sbjct: 577 IVDAMAYNTLIDGHTSIGQTDRAV----------------TILKHMTGVASMPNHFTFFI 620

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L  +L    A  V    +   S+ +  +L D    F +M K  +     T LS+L G +
Sbjct: 621 LLRHLLQRRLAEHVP---LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFS 677

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
           +  +L  V+S ++ +  ++  L+  +YN L+N   K  + S A  LL  M+G G++P+  
Sbjct: 678 EERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLI 737

Query: 689 THG-LLVGSSVGEEIDSRRFAFDSSSFPDSVSD 720
            +  LL G +   + D  +  F SS + +  +D
Sbjct: 738 FYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTD 770



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 4/145 (2%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M K   P+     +S++  F    R++    ++  M      L+ D++N ++    +  R
Sbjct: 657 MKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCK-LR 715

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            ++D   +   M+  G +PN+    YLL  L    + + A + FR    K    +   ++
Sbjct: 716 MYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWK 775

Query: 242 IVIKGLIANSRVD---DSVSILGEM 263
           ++I G I     D   D +S+L +M
Sbjct: 776 VIIDGFIRKGHADMCHDMISMLEQM 800


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 170/715 (23%), Positives = 303/715 (42%), Gaps = 83/715 (11%)

Query: 10   ISNKIIKWV---NLTSC-----ISSLSCANTIP-----LSSETDMIKSHQTTDYEA--KI 54
            +S KI K +   N T C      S+L+     P      +S  D    HQ T+     + 
Sbjct: 435  VSTKIPKSIVVFNRTPCPSFSDFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRA 494

Query: 55   QSLRHNLSP-------DHLIRVLDNTN-DLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
            + LR +L P       DHLI VL     D    L  F W   + R     ++ C +++ L
Sbjct: 495  EPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA--RSRRDSNLESLC-IVIHL 551

Query: 107  GLAG-NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA-MRVLVNMNSGGFKL 164
             +A  +++  + L  +  +    NV E+ +      V  Y+  G+  RV           
Sbjct: 552  AVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVF---------- 601

Query: 165  SVDVFNVVL---GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN-YLLEVLFETNRIES 220
              DVF  VL   G + E ++       V+++M+  G+V +VD+ N YL  +  + N+  +
Sbjct: 602  --DVFFQVLVEFGMLPEARK-------VFEKMLNYGLVLSVDSCNVYLARLSKDCNKTAT 652

Query: 221  ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
            A+  FR   + G C N  ++ IVI  +    R++++  +L  M   G   ++  Y+ +I 
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 281  MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
              CR  +L++  +L + M+   L P+  TY  +I  LC   +L +A +   +MI  G+ P
Sbjct: 713  GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772

Query: 341  TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
               V+  +V G C+ G                             A KFF       +M 
Sbjct: 773  DTIVYTTLVDGFCKRGDIRA-------------------------ASKFFY------EMH 801

Query: 401  DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
             R I  D  ++   I   C+  ++ +A +L   M+   + PD  T++  + G CK  + +
Sbjct: 802  SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIK 861

Query: 460  DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            DA RV   +       + ++Y+ L++GLC+   +  A E+   M K G   +  ++N ++
Sbjct: 862  DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 921

Query: 520  YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             GLC    +++A++L     ++G +  T TYT +M    K         +L +ML +G  
Sbjct: 922  NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQ 981

Query: 580  LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
              +  + +L+        L+D     N M+  G+ P+  T   L+      + L   ++ 
Sbjct: 982  PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAI 1041

Query: 640  INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               + S     D   Y  L+ G        +A +L   M GKG+    +T+ +L+
Sbjct: 1042 YKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1096



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 206/477 (43%), Gaps = 17/477 (3%)

Query: 122  MVKERYPNVREALISLVFSFVNHY-----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
            +V   +P V        ++ V H+     R+N A  +L+ M   G+   V  ++ V+   
Sbjct: 655  IVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGY 714

Query: 177  VEEKRGFADFVFVYK---EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
                  F +   V+K   +M + G+ PN  T   ++ +L    ++  A + F  M  +G 
Sbjct: 715  CR----FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770

Query: 234  CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
             P++  +  ++ G      +  +     EM    I  ++  YT II   C+   + EA +
Sbjct: 771  LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830

Query: 294  LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
            LF  M    L PD +T+ EL+N  C+   + DA  +   MI  G +P    +  ++ GLC
Sbjct: 831  LFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 890

Query: 354  EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA-KCILEKMADRKIADCD 408
            + G  D +   L +       P    +N+++   C +G    A K + E  A    AD  
Sbjct: 891  KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950

Query: 409  SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
            ++   +   C++ E+ KA E+L  M+   + P   T++  + G C     ED  ++   +
Sbjct: 951  TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010

Query: 469  SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             A+ +  ++ +++ LV+  C    +  A  ++  M   G      ++  L+ G C  R +
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070

Query: 529  DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             +A  L       G S + STY+ ++ G  K ++  +   +  QM  +G A D E +
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF 1127



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 181/436 (41%), Gaps = 43/436 (9%)

Query: 89   QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVN 148
            QK  +  + TY  +I  L     + E E     M+ +          +LV  F     + 
Sbjct: 732  QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791

Query: 149  GAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
             A +    M+S      V  +  ++      G +VE  +       ++ EM+  G+ P++
Sbjct: 792  AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-------LFHEMLCRGLEPDI 844

Query: 203  DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
             T   L+    +   I+ A      M + GC PN  T+  +I GL     +D +  +L E
Sbjct: 845  ITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904

Query: 263  MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
            M+ +G+Q  +  Y  I+  LC+   +EEA++L     A  L  D +TY  L++  C++  
Sbjct: 905  MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964

Query: 323  LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
            +D A +IL +M+  GL PT   F  ++ G C  G  ++    L                 
Sbjct: 965  MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL----------------- 1007

Query: 383  CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
                  + LAK I          +  ++N  ++  C    ++ A  +   M    V PD 
Sbjct: 1008 -----NWMLAKGI--------APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054

Query: 443  ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             TY   V G C   N ++A  +F+++  +   +   +YS L++G  + +K  EA E+F  
Sbjct: 1055 KTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114

Query: 503  MSKNGCSLSSSSFNIL 518
            M ++G +     F+  
Sbjct: 1115 MRRDGLAADKEIFDFF 1130



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 11/242 (4%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            TY  ++  L  +GN+EE   L                 +L+ ++     ++ A  +L  M
Sbjct: 916  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975

Query: 158  NSGGFKLSVDVFNVV-----LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
               G + ++  FNV+     L  ++E+     ++      M+  GI PN  T N L++  
Sbjct: 976  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW------MLAKGIAPNATTFNCLVKQY 1029

Query: 213  FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
               N +++A   ++ M  +G  P+ +T+E ++KG      + ++  +  EM   G  + +
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSV 1089

Query: 273  SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
            S Y+ +I    +  K  EA  +F  MR   L  D+  ++   +   +  R D   D +++
Sbjct: 1090 STYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDE 1149

Query: 333  MI 334
            +I
Sbjct: 1150 II 1151


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 221/504 (43%), Gaps = 40/504 (7%)

Query: 45  HQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSI-QKRFQHTADTYCKMI 103
            Q    +  I+     L P  L+ ++    ++  AL+IF +       F H  DTY  ++
Sbjct: 29  QQYCTEKPTIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSIL 88

Query: 104 LKLGLAGNVEEMEGLCQNMVKERYPNVR---EALISLVFSFVNHYRVNGAMRVLVNMNSG 160
            KL  A   + +E L  ++ +  YP ++      I L+ ++    R   +MR+ + +   
Sbjct: 89  FKLSRARAFDPVESLMADL-RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF 147

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA--GIVPNVDTLNYLLEVLFETNRI 218
           G K SV   N +L  +++ +R   D V    +  K   GI PN+ T N L++ L + N I
Sbjct: 148 GVKRSVRSLNTLLNVLIQNQR--FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 205

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           ESA      +   G  PN  T+  ++ G +A   ++ +  +L EM D G   +   YT +
Sbjct: 206 ESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVL 265

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +   C+  +  EA  +   M   ++ P+E+TY  +I  LC+  +  +A ++ ++M+    
Sbjct: 266 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSF 325

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
            P   +   ++  LCE  K DE+             P NALL                  
Sbjct: 326 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL--------------- 370

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
                          I WLC+   + +A +L       S +P   TY+  + G C+    
Sbjct: 371 ---------------IHWLCKEGRVSEARKLFDEFDKGS-IPSLLTYNTLIAGMCEKGEL 414

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +A R++  +  +    ++ +Y+ L+EGL +   + E V V   M ++GC  + ++F IL
Sbjct: 415 TEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLIL 474

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSG 542
             GL  + K + AI++ S+A  +G
Sbjct: 475 FEGLQKLGKEEDAIKIVSMAVMNG 498



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 202/445 (45%), Gaps = 18/445 (4%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNR------IESALDQFRRMHKKGCCPNSRTF 240
           +F+Y      G   N DT +    +LF+ +R      +ES +   R  +    C     F
Sbjct: 66  IFLYAGKSHPGFTHNYDTYH---SILFKLSRARAFDPVESLMADLRNSYPPIKC-GENLF 121

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR- 299
             +++      R + S+ I   + D G++  +     ++ +L +  + +    +FK  + 
Sbjct: 122 IDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKE 181

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           +  + P+  T   L+  LC+   ++ A  +L+++  +GL P    +  I+ G    G  +
Sbjct: 182 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDME 241

Query: 360 ESVNFLE---DKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPI 414
            +   LE   D+  Y  +  +  L++  C  G+F  A  +++ M   +I   + ++ + I
Sbjct: 242 SAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 301

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           R LC+ ++  +A  +   M+  S +PD +     +   C+    ++A  ++R++   + +
Sbjct: 302 RALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 361

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            D+   S L+  LC+  +++EA ++F    K G   S  ++N LI G+C   ++ +A RL
Sbjct: 362 PDNALLSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRL 420

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
               +         TY  ++ GL K    K+ + VL +ML  GC  +   + IL + + +
Sbjct: 421 WDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQK 480

Query: 595 QNKLKDCALFFNVMVKAGLVPDRET 619
             K +D     ++ V  G V D+E+
Sbjct: 481 LGKEEDAIKIVSMAVMNGKV-DKES 504



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 166/374 (44%), Gaps = 15/374 (4%)

Query: 342 DDVFVDIVRGLCEVGKFDESVN-FLE-DKCGYVTSPH--NALLECCCNAGKFFLAKCILE 397
           +++F+D++R     G+++ S+  FL     G   S    N LL       +F L   + +
Sbjct: 118 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 177

Query: 398 KMADR-----KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              +       I  C   N+ ++ LC+  +I  AY++L  +    +VP+  TY+  + G 
Sbjct: 178 NSKESFGITPNIFTC---NLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGY 234

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
               + E A RV  ++  +    D+I+Y+ L++G C++ + +EA  V   M KN    + 
Sbjct: 235 VARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 294

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++ ++I  LC  +K  +A  +            +S   K++  L +  +  +   +  +
Sbjct: 295 VTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 354

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML   C  D      LI  + ++ ++ +    F+   K G +P   T  +L+ G+ +  +
Sbjct: 355 MLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGE 413

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L       + +       ++  YN+LI GL K G   +   +L+ ML  G  P+ TT  +
Sbjct: 414 LTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLI 473

Query: 693 LVG--SSVGEEIDS 704
           L      +G+E D+
Sbjct: 474 LFEGLQKLGKEEDA 487


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 239/516 (46%), Gaps = 6/516 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D + ++ +MVK+   P++   + LL  + + N+ +  +    +M   G   N  T+ I I
Sbjct: 58  DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                 S++  +++ILG+M  LG    +     ++   C  N++ EA+ L   M  +   
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +T+  L++ L ++ +  +A  ++E M+V G  P    +  ++ GLC+ G+ D ++N 
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237

Query: 365 LED-KCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L   + G + +    +N +++  C       A  +  KM  + I  D  ++N  I  LC 
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSI 478
                 A  LL  M+  ++ PD   ++A +    K     +A +++ + V ++    D +
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ L++G C+ +++ E +EVF  MS+ G   ++ ++  LI+G    R  D A  +    
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S G      TY  ++ GL      +  LVV   M      LD+  Y  +I+++ +  K+
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           +D    F  +   G+ P+  T  +++ G           +   ++  D  + +S  YN L
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           I    ++G  + ++ L+  M   G+  DA+T GL+ 
Sbjct: 538 IRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVT 573



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 184/393 (46%), Gaps = 11/393 (2%)

Query: 141 FVNHY----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           F+N++    +++ A+ +L  M   G+  S+   N +L       R  ++ V +  +MV+ 
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR-ISEAVALVDQMVEM 174

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+  T   L+  LF+ N+   A+    RM  KGC P+  T+  VI GL      D +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +++L +M    I+ ++  Y  II  LC+   +++A  LF  M    + PD  TY  LI+C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-----KCGY 371
           LC   R  DA+ +L DM+   + P    F  ++    + GK  E+    ++      C  
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
               +N L++  C   +      +  +M+ R  + +  ++   I    +  +   A  + 
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +MV   V PD  TY+  + G C   N E AL VF  +  + + LD ++Y+ ++E LC+ 
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            K+ +  ++FC +S  G   +  ++  ++ G C
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 175/425 (41%), Gaps = 41/425 (9%)

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--- 367
           E L   + ++L+LDDA  +  DM+     P+   F  ++  + ++ KFD  ++  E    
Sbjct: 44  ENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103

Query: 368 ----------------------------------KCGYVTS--PHNALLECCCNAGKFFL 391
                                             K GY  S    N+LL   C+  +   
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  ++++M +     D  ++   +  L ++ +  +A  L+ RMVV    PD  TY A + 
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    + AL +  ++    +  D + Y+ +++GLC+ + + +A ++F  M   G   
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              ++N LI  LC   +   A RL S       +     +  ++   VK  +  +   + 
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343

Query: 571 AQML-VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
            +M+  + C  DV AY  LI+   +  ++++    F  M + GLV +  T  +L+HG   
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                       ++VSD    D   YNIL++GL   G    A  + + M  +    D  T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463

Query: 690 HGLLV 694
           +  ++
Sbjct: 464 YTTMI 468



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 2/287 (0%)

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           R + ++ ++  A  L G MV S   P    +S  +    K+  ++  + +  Q+    + 
Sbjct: 48  RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            +  +YS  +   C+  +++ A+ +   M K G   S  + N L+ G C   ++ +A+ L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G    T T+T ++ GL +  +A + + ++ +M+V+GC  D+  Y  +I  + +
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227

Query: 595 QNKLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           + +  D AL   N M K  +  D     +++ GL     +       NK+ +     D  
Sbjct: 228 RGE-PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
            YN LI+ L   G  S AS LL  ML K   PD      L+ + V E
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 230/500 (46%), Gaps = 31/500 (6%)

Query: 226 RRMHKKGCCPNSRTFEIVIKGLI---ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           +R+H K   PN  T   +IK L+   +   V  S +I  ++  LG+++  + +  +I   
Sbjct: 2   KRLHLK---PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGC 58

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C ENKL EAI L   M+     PD ++Y  +++ LC+  +L++A D+L DM   GL P  
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 343 DVFVDIVRGLCEVGKFDESV---------NFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
           + F  +V G C++G   E+          N L D   Y T     L+   C  GK   A 
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTT-----LIGGLCKDGKIDEAF 173

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + ++M + K +    ++N+ I    E     K +EL+  M    V P+  TY+  V   
Sbjct: 174 RLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWY 233

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            K    ++A    R++       D ++++ L  G C+  +++EA  +   MS+ G  ++S
Sbjct: 234 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNS 293

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            + N +++ LC  RK+D A +L S A   G      +Y  +++G  K+ ++        +
Sbjct: 294 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDE 349

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M  +     +  Y  +I  +    K        N ++++GLVPD+ T  +++ G     Q
Sbjct: 350 MKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQ 409

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           +       NK+V  S   D    NIL+ GL  EG+  +A  L    + KG   DA T   
Sbjct: 410 VDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNT 469

Query: 693 LVGSSVGEEIDSRRF--AFD 710
           ++ S + EE    RF  AFD
Sbjct: 470 II-SGLCEE---GRFEEAFD 485



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/508 (21%), Positives = 220/508 (43%), Gaps = 34/508 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +++K G+  N +T N L+      N++  A+    +M    C P++ ++  ++  L 
Sbjct: 35  IFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLC 94

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +++++  +L +M + G+    + +  ++   C+   L+EA  +  +M   +++PD  
Sbjct: 95  KKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVR 154

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI  LC++ ++D+A  + ++M  + L P    +  ++ G  E     +    +++ 
Sbjct: 155 TYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEM 214

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            G    P NA+                             ++N+ ++W  +  ++  A  
Sbjct: 215 EGKGVKP-NAV-----------------------------TYNVVVKWYVKEGKMDNAGN 244

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
            L +M  S   PDC T++    G CK     +A R+  ++S + L ++S++ + ++  LC
Sbjct: 245 ELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              K+ +A ++    SK G  +   S+  LI G     KV K+     +        +  
Sbjct: 305 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF---KVGKSXXWDEMKEKEIIP-SII 360

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  ++ GL +  +    +    ++L  G   D   Y  +I     + ++     F N M
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           VK    PD  T   L+ GL     L          +S  + +D+  +N +I+GL +EG  
Sbjct: 421 VKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRF 480

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGS 696
            +A  LL  M  K   PD  TH  ++ +
Sbjct: 481 EEAFDLLAEMEEKKLGPDCYTHNAILSA 508



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/501 (22%), Positives = 223/501 (44%), Gaps = 43/501 (8%)

Query: 161 GFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           G +++ + FN+++ G  +E K   ++ + +  +M      P+  + N +L+VL +  ++ 
Sbjct: 43  GVEVNTNTFNILICGCCIENK--LSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLN 100

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A D    M   G  PN  TF I++ G      + ++  ++  M    +  ++  YT +I
Sbjct: 101 EARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLI 160

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC++ K++EA RL   M  L L+P  +TY  LIN   E        +++++M   G+ 
Sbjct: 161 GGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVK 220

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPH----NALLECCCNAGKFFLAK 393
           P    +  +V+   + GK D + N L   ++ G+  SP     N L    C AG+   A 
Sbjct: 221 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF--SPDCVTFNTLSNGYCKAGRLSEAF 278

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG--------------------- 431
            ++++M+ + +  +  + N  +  LC   ++  AY+LL                      
Sbjct: 279 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY 338

Query: 432 ----------RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
                      M    ++P   TY   + G C+    + ++    ++    LV D  +Y+
Sbjct: 339 FKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYN 398

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++ G C+  ++ +A      M K        + NIL+ GLC    +DKA++L     S 
Sbjct: 399 TIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISK 458

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G +    T+  I+ GL +  R ++   +LA+M  +    D   +  ++ ++++  ++K+ 
Sbjct: 459 GKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEA 518

Query: 602 ALFFNVMVKAGLVPDRETMLS 622
             F + +V+ G + D+   L+
Sbjct: 519 EEFMSGIVEQGKLQDQTISLN 539



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/500 (21%), Positives = 206/500 (41%), Gaps = 48/500 (9%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+VR    +L+       +++ A R+   M +      V  +N+++    E       F 
Sbjct: 151 PDVR-TYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFE 209

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +  EM   G+ PN  T N +++   +  ++++A ++ R+M + G  P+  TF  +  G 
Sbjct: 210 LI-DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGY 268

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R+ ++  ++ EM   G+++       I+  LC E KL++A +L           DE
Sbjct: 269 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 328

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           ++Y  LI    +  +    +++ E  I+    P+   +  ++ GLC  GK D+S+    D
Sbjct: 329 VSYGTLIMGYFKVGKSXXWDEMKEKEII----PSIITYGTMIGGLCRSGKTDQSI----D 380

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
           KC       N LLE                      + D  ++N  I   C   ++ KA+
Sbjct: 381 KC-------NELLESGL-------------------VPDQTTYNTIILGYCREGQVDKAF 414

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
               +MV  S  PD  T +  V G C     + AL++F+   ++   +D+++++ ++ GL
Sbjct: 415 HFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGL 474

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  +  EA ++   M +        + N ++  L    ++ +A    S     G     
Sbjct: 475 CEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQG----- 529

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
               K+    + L + K           +  ++   A+   I  +  Q K KD       
Sbjct: 530 ----KLQDQTISLNKRKTESSSETSQESDPNSV---AFSEQINELCTQGKYKDAMHMIQE 582

Query: 608 MVKAGLVPDRETMLSLLHGL 627
             + G++  + T +SL+ GL
Sbjct: 583 STQKGIILHKSTYISLMEGL 602



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/377 (20%), Positives = 151/377 (40%), Gaps = 78/377 (20%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE--------------KRG-FADFV--- 187
           R++ A R++  M+  G K++    N +L  +  E              KRG F D V   
Sbjct: 273 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYG 332

Query: 188 ------------FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
                         + EM +  I+P++ T   ++  L  + + + ++D+   + + G  P
Sbjct: 333 TLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVP 392

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIR 293
           +  T+  +I G     +VD +     +M     + +L  +TC  ++  LC E  L++A++
Sbjct: 393 DQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDL--FTCNILVRGLCTEGMLDKALK 450

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LFK   +     D +T+  +I+ LCE  R ++A D+L +M                    
Sbjct: 451 LFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEM-------------------- 490

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNI 412
                       E K G     HNA+L    +AG+   A+  +  + ++ K+ D      
Sbjct: 491 -----------EEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQD------ 533

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
                 +   + K              P+   +S  +   C    Y+DA+ + ++ + + 
Sbjct: 534 ------QTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKG 587

Query: 473 LVLDSISYSKLVEGLCQ 489
           ++L   +Y  L+EGL +
Sbjct: 588 IILHKSTYISLMEGLIK 604


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 229/514 (44%), Gaps = 44/514 (8%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F F+ + MV  G +P++     L+       + + A      + + G  P+  T+ ++I 
Sbjct: 77  FKFL-ESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLIS 135

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G   +  +D+++ +L  M    +  ++  Y  I+  LC   KL++A+ +       +  P
Sbjct: 136 GYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 192

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D +TY  LI   C+   +  A  +L++M   G  P    +  ++ G+C+ G+ DE++ FL
Sbjct: 193 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 252

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
            +   Y   P    HN +L   C+ G++  A+ +L  M  +  +    ++NI I +LC  
Sbjct: 253 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 312

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             + +A ++L +M +    P+                                   S+SY
Sbjct: 313 GLLGRAIDILEKMPMHGCTPN-----------------------------------SLSY 337

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+ G C+ +K+  A+E    M   GC     ++N L+  LC   KVD A+ + +   S
Sbjct: 338 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 397

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G S    TY  ++ GL K+ + +  + +L +M  +G   D+  Y  L+  +S + K+ +
Sbjct: 398 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 457

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              FF+ +   G+ P+  T  S++ GL    Q       +  ++S       + Y ILI 
Sbjct: 458 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 517

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G+  EGL  +A  LL+ +  +G V  ++   + V
Sbjct: 518 GIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 551



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 215/447 (48%), Gaps = 9/447 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F    +   A  V+  +   G    V  +NV++      K G  D     + + +
Sbjct: 97  SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC--KSGEIDNAL--QVLDR 152

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + P+V T N +L  L ++ +++ A++   R  +K C P+  T+ I+I+     S V  
Sbjct: 153 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 212

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L EM + G + ++  Y  +I  +C+E +L+EAI+    M +    P+ +T+  ++ 
Sbjct: 213 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 272

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            +C   R  DA  +L DM+  G +P+   F  ++  LC  G    +++ LE    +  +P
Sbjct: 273 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 332

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
               +N LL   C   K   A   L+ M  R    D  ++N  +  LC++ ++  A E+L
Sbjct: 333 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 392

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            ++      P   TY+  + G  K+   E A+++  ++  + L  D I+YS LV GL + 
Sbjct: 393 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 452

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+ EA++ F  +   G   ++ ++N ++ GLC  R+ D+AI   +   S     T +TY
Sbjct: 453 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 512

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           T ++ G+     AK+ L +L ++   G
Sbjct: 513 TILIEGIAYEGLAKEALDLLNELCSRG 539



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 40/254 (15%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ED  +    +  +  + D I  + L+ G C++ K  +A  V   + ++G      ++N+L
Sbjct: 74  EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVL 133

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C   ++D A+++         +    TY  I+  L    + K  + VL + L + C
Sbjct: 134 ISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 190

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y ILI++  +++ +       + M   G  PD  T                   
Sbjct: 191 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT------------------- 231

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-- 696
                           YN+LING+ KEG   +A   L+ M   G  P+  TH +++ S  
Sbjct: 232 ----------------YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 275

Query: 697 SVGEEIDSRRFAFD 710
           S G  +D+ +   D
Sbjct: 276 STGRWMDAEKLLSD 289



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF-VFVYKEMV 194
            L+  F    +++ A+  L  M S G    +  +N +L A+   K G  D  V +  ++ 
Sbjct: 339 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC--KDGKVDVAVEILNQLS 396

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G  P + T N +++ L +  + E A+     M +KG  P+  T+  ++ GL    +VD
Sbjct: 397 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 456

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +++    ++  LGI+     Y  I+  LC+  + + AI     M +    P E TY  LI
Sbjct: 457 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 516

Query: 315 NCLCENLRLDDANDILEDMIVIGL 338
             +       +A D+L ++   GL
Sbjct: 517 EGIAYEGLAKEALDLLNELCSRGL 540


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 266/604 (44%), Gaps = 50/604 (8%)

Query: 97  DTYCKMILKLGLAGNVEEM--EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           D YCK+         VE M  +GL  ++V            +LV  F      + A  V 
Sbjct: 197 DGYCKVQDMAAALAVVERMTTQGLSLDVVGYN---------TLVAGFFYSGDADAAWEVA 247

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M + G + SV     ++G   + KR    F  +Y+ MV++G++P+V TL+ L++ L  
Sbjct: 248 ERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFT-LYEGMVRSGVLPDVVTLSALVDGLCR 306

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             R   A   FR M K G  PN  T+   I  L    RV++S+ +LGEM   G+ ++L  
Sbjct: 307 DGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVM 366

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT ++  L +E K+EEA  + +   + ++ P+ +TY  L++  C    +D A  +L  M 
Sbjct: 367 YTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQME 426

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
              ++P    F  I+ GL + G                         C   A  +     
Sbjct: 427 EKSVSPNVVTFSSILNGLVKRG-------------------------CIAKAAGY----- 456

Query: 395 ILEKMADRKIA-DCDSWNIPIRWL--CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            + KM D  IA +  ++   I     C+ +E   A ++   M+   V  +     + V G
Sbjct: 457 -MRKMKDSGIAPNVVTYGTLIDGFFKCQGQE--AALDVYRDMLHEGVEANNFIVDSLVNG 513

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K  N E+A  +F+ +  + L+LD ++Y+ L++GL +   +  A++V   + +   S  
Sbjct: 514 LRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPD 573

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           +  +N+ I  LC + K  +A        ++G     +TY  ++    +       L +L 
Sbjct: 574 AVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLN 633

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M       ++  Y  L+  + E   ++      N M  AG  P   T   +L   + GS
Sbjct: 634 EMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACS-GS 692

Query: 632 QLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           +   V   +++L+  + +  D ++YN L++ L   G+T +A+ +LD MLG+G  PD  T 
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITF 752

Query: 691 GLLV 694
             L+
Sbjct: 753 NALI 756



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/570 (22%), Positives = 250/570 (43%), Gaps = 51/570 (8%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  ++ +LG  G +EE + + ++ + +   PN     + LV +      ++GA ++L+ M
Sbjct: 367 YTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTV-LVDAHCRAGNIDGAEQMLLQM 425

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
                  +V  F+ +L  +V  KRG  A      ++M  +GI PNV T   L++  F+  
Sbjct: 426 EEKSVSPNVVTFSSILNGLV--KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQ 483

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E+ALD +R M  +G   N+   + ++ GL  N  ++++ ++  +M + G+ L+   Y 
Sbjct: 484 GQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYA 543

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  L +   +  A+++ + +   +L PD + Y   INCLC   +  +A   L++M   
Sbjct: 544 TLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNT 603

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED----------------------------- 367
           GL P    +  ++   C  G   +++  L +                             
Sbjct: 604 GLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA 663

Query: 368 --------KCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
                     G+  +P  +  +L+ C  +   ++   + E M    + AD   +N  +  
Sbjct: 664 KYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHV 723

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC +   RKA  +L  M+   + PD  T++A +LG CK  + ++A   + Q+  Q L  +
Sbjct: 724 LCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN 783

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +++ L+ GL    +I EA  V C M K G   ++ +++IL+ G        +A+RL  
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYC 843

Query: 537 LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
              S G     STY  ++    K   + +AK+L    ++M   G       Y IL+   S
Sbjct: 844 EMVSKGFIPKASTYNSLISDFAKAGMMNQAKEL---FSEMKRRGVLHTSSTYDILLNGWS 900

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           +     +  +    M + G  P + T+ S+
Sbjct: 901 KLRNGTEVRILLKDMKELGFKPSKGTISSM 930



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 127/594 (21%), Positives = 242/594 (40%), Gaps = 41/594 (6%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           + + S     RVN ++ +L  M S G  + + ++  V+  + +E +   +   V +  + 
Sbjct: 334 TFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGK-IEEAKDVLRHALS 392

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             I PN  T   L++       I+ A     +M +K   PN  TF  ++ GL+    +  
Sbjct: 393 DNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAK 452

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +   + +M D GI   +  Y  +I    +    E A+ +++ M    +  +    + L+N
Sbjct: 453 AAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L +N  +++A  + +DM   GL      +  ++ GL + G    ++   ++      SP
Sbjct: 513 GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSP 572

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               +N  + C C  GKF  AK  L++M +  +  D  ++N  I   C      KA +LL
Sbjct: 573 DAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLL 632

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG---- 486
             M  SS+ P+  TY+  V+G  +    E A  +  ++++       ++Y ++++     
Sbjct: 633 NEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGS 692

Query: 487 -----LCQVEKITEA-------------VEVFCC-------------MSKNGCSLSSSSF 515
                + +V ++                V V CC             M   G +  + +F
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITF 752

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI G C    +D A    +     G S   +T+  ++ GL    R  +   V+ +M  
Sbjct: 753 NALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKK 812

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   +   Y IL+   ++++   +    +  MV  G +P   T  SL+   A    ++ 
Sbjct: 813 MGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQ 872

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                +++     +  SS Y+IL+NG  K    ++   LL  M   G+ P   T
Sbjct: 873 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGT 926



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/535 (20%), Positives = 222/535 (41%), Gaps = 9/535 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G  +S  +  +    +V E    A+ +   + +   G+V      N L++   +   + +
Sbjct: 152 GVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVV----GWNALIDGYCKVQDMAA 207

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL    RM  +G   +   +  ++ G   +   D +  +   M   G++  +  +T +I 
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C+  ++EEA  L++ M    ++PD +T   L++ LC + R  +A  +  +M  IG+ P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----PHNALLECCCNAGKFFLAKCIL 396
               +   +  L +V + +ES+  L +      +     +  +++     GK   AK +L
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387

Query: 397 -EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
              ++D    +C ++ + +   C    I  A ++L +M   SV P+  T+S+ + G  K 
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
                A    R++    +  + ++Y  L++G  + +    A++V+  M   G   ++   
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + L+ GL     +++A  L       G       Y  +M GL K       L V  +++ 
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
              + D   Y + I  +    K  +   F   M   GL PD+ T  +++           
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
               +N++   S   +   Y  L+ GL + G+  +A YLL+ M   G+ P   T+
Sbjct: 628 ALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTY 682



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 123/588 (20%), Positives = 245/588 (41%), Gaps = 59/588 (10%)

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRG-FADFVFVY 190
           L S++ S+ + + +  A+ +L + +    +++ D   +N+ L  + E+  G  A  V   
Sbjct: 83  LNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVL-- 140

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESA------LDQFRRMHKKGCCPNSRTFEIVI 244
            EM K G+  +  T++  L  L  T  +  A      L + R +   G       +  +I
Sbjct: 141 SEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVV----GWNALI 196

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G      +  +++++  M   G+ L++  Y  ++         + A  + + M+A  + 
Sbjct: 197 DGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVE 256

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P  +T+  LI   C+  R+++A  + E M+  G+ P       +V GLC  G+F E+   
Sbjct: 257 PSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYAL 316

Query: 365 LE--DKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWL 417
               DK G   +P++      ++      +   +  +L +M  R +A D   +   +  L
Sbjct: 317 FREMDKIG--VAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  +I +A ++L   +  ++ P+C TY+  V   C+  N + A ++  Q+  +S+  + 
Sbjct: 375 GKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNV 434

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           +++S ++ GL                 K GC   ++ +         MRK+         
Sbjct: 435 VTFSSILNGLV----------------KRGCIAKAAGY---------MRKMK-------- 461

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              SG +    TY  ++ G  K Q  +  L V   ML EG   +      L+  + +   
Sbjct: 462 --DSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGN 519

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           +++    F  M + GL+ D     +L+ GL     +        +L+  +   D+ +YN+
Sbjct: 520 IEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNV 579

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
            IN L + G  S+A   L  M   G  PD  T+  ++ +   E   S+
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 138/588 (23%), Positives = 266/588 (45%), Gaps = 42/588 (7%)

Query: 34  PLSSETDMIKSHQTTDYEAKIQSLRHNLSP-------DHLIRVLDN-TNDLSSALKIFKW 85
           P+  +++++        + + + LR  L P       DHLI VL N  ND    L  F+W
Sbjct: 58  PIIQDSELVHRISIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEW 117

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
             +++    + +  C ++ ++  A    +M    + ++++ + N     + +  SF    
Sbjct: 118 ACLRR--DPSLEARC-IVAQIATASKDLKM---ARKLIQDFWVNPN---LDVGVSF---- 164

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-----ADFVF-VYKEMVKAGIV 199
               A ++   M + G  +SVD  N+ +  + E+  G       ++V  + +EM   G+ 
Sbjct: 165 ----ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLK 220

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN  T N ++ +L +T ++  A    R M  +G  P+   +  +I G      V  +  +
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM    I  +   YT +I  LC+  ++ EA +LF  M    L PDE+TY  LI+  C+
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----P 375
             ++ +A  +   M+ +GLTP    +  +  GLC+ G+ D +   L + C          
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA----DCDSWNIPIRWLCENEEIRKAYELLG 431
           +N+L+   C AG    A   ++ M D ++A    D  ++   +   C++ E+ +A+ELL 
Sbjct: 401 YNSLVNGLCKAGNIDQA---VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 457

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +M+   + P   T++  + G C     ED  ++ + +  + ++ ++ +Y+ L++  C   
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            +    E++  M   G     +++NILI G C  R + +A  L       G + T S+Y 
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 577

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            ++ G  K ++  +   +  QM  EG   D E Y I      ++ K++
Sbjct: 578 ALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 625



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 204/464 (43%), Gaps = 43/464 (9%)

Query: 243 VIKGLIANSRVDDSVSILGEMFD--LGIQLELSFYTC--IIPMLCREN-------KLEEA 291
           +I+    N  +D  VS   ++FD  L   L +S  +C   I  L  +        K E  
Sbjct: 148 LIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWV 207

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           ++L + M+   L P+  TY  +I  LC+  ++ +A  +L +MI  G+ P   ++  ++ G
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSW 410
            C++G               V+S +                  + ++M  RKI+ D  ++
Sbjct: 268 FCKLGN--------------VSSAYR-----------------LFDEMQKRKISPDFITY 296

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
              I  LC+   + +A +L   MV   + PD  TY+A + G CK    ++A  +  Q+  
Sbjct: 297 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 356

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
             L  + ++Y+ L +GLC+  ++  A E+   M + G  L+  ++N L+ GLC    +D+
Sbjct: 357 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 416

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A++L      +G      TYT +M    K +       +L QML       V  + +L+ 
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
                  L+D       M++ G++P+  T  SL+      + +   +     + +   V 
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           D + YNILI G  K     +A +L   M+GKG+    +++  L+
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 236/510 (46%), Gaps = 49/510 (9%)

Query: 217 RIESALDQFRR----------MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG-EMFD 265
           +I S LD F +           H    C        +I  ++  + V++S ++LG E F 
Sbjct: 125 KIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFK 184

Query: 266 LG--IQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
                + +LS  +C  ++  L +EN+      ++K M    + P+ +T+  +IN LC+  
Sbjct: 185 RAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVG 244

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           +L+ A D+++DM V G  P    +  ++ G C++G+                        
Sbjct: 245 KLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR------------------------ 280

Query: 382 CCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                GK + A  IL++M + K++ +  ++N+ I   C++E +  A ++   M    + P
Sbjct: 281 ----VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
              TY++ V G C      +A  +  ++ + +L  + I+Y+ L+ G C+ + + EA E+F
Sbjct: 337 TVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELF 396

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             + K G + +  +FN L++G C   K+++A  L+ +    G     STY  +++G  + 
Sbjct: 397 DNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCRE 456

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            + +++  +L +M   G   D   Y ILI +  E+ + K  A   + M+  GL P   T 
Sbjct: 457 GKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTY 516

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             LL+G      L    +   ++  +    +   YN+LI G  ++G    A+ LL+ ML 
Sbjct: 517 NILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLE 576

Query: 681 KGWVPDATTHGLLVGSSVGEEIDSRRFAFD 710
           KG +P+ TT+ +     + EE+  + F  D
Sbjct: 577 KGLIPNRTTYEI-----IKEEMMEKGFLPD 601



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 139/579 (24%), Positives = 255/579 (44%), Gaps = 82/579 (14%)

Query: 12  NKIIKWVNLTSCISSLSCANTIPLSSE------TDMIKSHQTTDYEAKIQSLRHNLSPDH 65
           N I    +L  C  + +C  T P+S++      +D+I   Q +  ++ ++      SP  
Sbjct: 21  NCIFSTTHLPFCTYNPTC--TAPISNDFDPLIISDLISRQQWSILKSHVKFK----SPID 74

Query: 66  LIRVLDNTNDLSS--ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            +  L  + D+     L+ F W   +    ++ +  C+++  L  A +  ++  +  + V
Sbjct: 75  FLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFV 134

Query: 124 KERYPNVREALI-------------------SLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
           K    N   +LI                    LV ++V + +    +          +KL
Sbjct: 135 KGE-TNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKL 193

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA--- 221
           SV   N +L A+V+E   F    FVYKEM++  I PN+ T N ++  L +  ++  A   
Sbjct: 194 SVLSCNPLLSALVKENE-FGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252

Query: 222 -------------------LDQFRRMHKKG----------------CCPNSRTFEIVIKG 246
                              +D + +M + G                  PNS TF ++I G
Sbjct: 253 VDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDG 312

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +  +  ++ +  EM   G++  +  Y  ++  LC E KL EA  L   M + +L P+
Sbjct: 313 FCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPN 372

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  LIN  C+   L++A ++ +++   GLTP    F  ++ G C+ GK +E+  FL 
Sbjct: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA--FLL 430

Query: 367 DKC----GYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
            K     G++   S +N L+   C  GK    K +L +M  R + AD  ++NI I   CE
Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCE 490

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            +E +KA  L+  M+   + P   TY+  + G C   N   AL + +Q+  +    + ++
Sbjct: 491 KKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVT 550

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           Y+ L++G C+  K+ +A  +   M + G   + +++ I+
Sbjct: 551 YNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 11/299 (3%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREA 133
           +LS+ALK+F+ +  Q   + T  TY  ++  L   G + E + L   M+     PNV   
Sbjct: 318 NLSAALKVFEEMQSQG-LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI-T 375

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
             +L+  +     +  A  +  N+   G   +V  FN +L    +  +    F+ + K M
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFL-LQKVM 434

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G +PN  T N L+       ++E   +    M  +G   ++ T+ I+I         
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             +  ++ EM D G++     Y  ++   C E  L  A+ L K M       + +TY  L
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           I   C   +L+DAN +L +M+  GL P    +  I   + E G       FL D  G++
Sbjct: 555 IQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG-------FLPDIEGHL 606


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 137/541 (25%), Positives = 241/541 (44%), Gaps = 41/541 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+  SV  +N VL A+ +     A   F    M+  G+ PNV T N L+  L      + 
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFF--DSMLSDGVAPNVYTYNILIRALCGRGHRKE 168

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL   R M   GC PN  T+  ++        VD +  ++G M D G++  L  +  ++ 
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            +C+  K+E+A ++F  M    L PD ++Y  L+   C+     +A  +  +M   G+ P
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKC 394
               F  ++  +C+ G  + +V  +        +   VT    AL++  C  G  FL   
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT--FTALIDGFCKKG--FLDDA 344

Query: 395 ILEKMADRKIADCD------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           +L   A R +  C        +N  I   C    + +A ELL  M    + PD  TYS  
Sbjct: 345 LL---AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 401

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   CK C+   A  + +Q+  + ++ D+I+YS L+  LC+ +++++A  +F  M K G 
Sbjct: 402 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGL 461

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                ++  LI G C    V++A+ L      +G      TY+ ++ GL K  RA +   
Sbjct: 462 QPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 521

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L ++  E            I + ++ + L  C        KA L    +++L+LL G  
Sbjct: 522 LLFKLYHEEP----------IPANTKYDALMHCCR------KAEL----KSVLALLKGFC 561

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               ++        ++  +  LD S+Y++LI+G  + G   +A      ML +G+ P++T
Sbjct: 562 MKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNST 621

Query: 689 T 689
           +
Sbjct: 622 S 622



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/561 (21%), Positives = 233/561 (41%), Gaps = 66/561 (11%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVE--EKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           A+ +L +M   G   +V  +N ++ A     E  G    V +   M+  G+ PN+ T N 
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGM---MLDGGLKPNLVTFNS 225

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           ++  + +  ++E A   F  M ++G  P+  ++  ++ G        +++S+  EM   G
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I  ++  +T +I ++C+   LE A+ L + MR   L  +E+T+  LI+  C+   LDDA 
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH--------NAL 379
             +  M    + P+   +  ++ G C VG+ DE+   L +       P         +A 
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            + C     F L + +LEK     + D  +++  IR LCE + +  A+ L   M+   + 
Sbjct: 406 CKNCDTHSAFELNQQMLEKGV---LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQ 462

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY++ + G CK  N E AL +  ++    ++ D ++YS L+ GL +  +  EA ++
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522

Query: 500 FCCMSKNGCSLSSSSFNILIY---------------GLCVMRKVDKAIRLRSLAYSSGTS 544
              +       +++ ++ L++               G C+   +++A +           
Sbjct: 523 LFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADK----------- 571

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                                   V   ML     LD   Y +LI        +     F
Sbjct: 572 ------------------------VYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSF 607

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              M++ G  P+  + +SL+ GL +   +      I +L++   + D+     LI+    
Sbjct: 608 HKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLN 667

Query: 665 EGLTSQASYLLDLMLGKGWVP 685
           EG       +L  M   G +P
Sbjct: 668 EGNVDAVLDVLHGMAKDGLLP 688



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 198/473 (41%), Gaps = 31/473 (6%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+   +  V+  L +++ +  +      M   G+   +  Y  +I  LC     +EA
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           + + + MR     P+ +TY  L+        +D A  ++  M+  GL P    F  +V G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
           +C+ GK +++    +                              E M +    D  S+N
Sbjct: 230 MCKAGKMEDARKVFD------------------------------EMMREGLAPDGVSYN 259

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             +   C+     +A  +   M    ++PD  T+++ +   CK  N E A+ + RQ+  +
Sbjct: 260 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRER 319

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            L ++ ++++ L++G C+   + +A+     M +     S   +N LI G C++ ++D+A
Sbjct: 320 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEA 379

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             L     + G      TY+ I+    K         +  QML +G   D   Y  LI+ 
Sbjct: 380 RELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRV 439

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           + E+ +L D  + F  M+K GL PD  T  SL+ G      +    S  +K+V    + D
Sbjct: 440 LCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPD 499

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS 704
              Y++LINGL K     +A  LL  +  +  +P  T +  L+      E+ S
Sbjct: 500 VVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKS 552



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 118/524 (22%), Positives = 220/524 (41%), Gaps = 69/524 (13%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVF-- 188
           +LV +F     V+GA R++  M  GG K ++  FN ++  +     +E+ R   D +   
Sbjct: 190 TLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMRE 249

Query: 189 ---------------------------VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
                                      V+ EM + GI+P+V T   L+ V+ +   +E A
Sbjct: 250 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWA 309

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +   R+M ++G   N  TF  +I G      +DD++  +  M    I+  +  Y  +I  
Sbjct: 310 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALING 369

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C   +++EA  L   M A  L PD +TY  +I+  C+N     A ++ + M+  G+ P 
Sbjct: 370 YCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPD 429

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  ++R LCE  +  ++    ++       P    + +L++  C  G    A  + +
Sbjct: 430 AITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHD 489

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           KM    +  D  ++++ I  L ++    +A +LL ++     +P    Y A         
Sbjct: 490 KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDAL-------- 541

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
                +   R+   +S++        L++G C    + EA +V+  M     +L  S ++
Sbjct: 542 -----MHCCRKAELKSVL-------ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 589

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA----Q 572
           +LI+G C    V KA+         G +  +++   ++ GL      ++ +VV A    Q
Sbjct: 590 VLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLF-----ENGMVVEADQVIQ 644

Query: 573 MLVEGCAL-DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            L+  C+L D EA   LI     +  +       + M K GL+P
Sbjct: 645 QLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 216/476 (45%), Gaps = 38/476 (7%)

Query: 221 ALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVDDSVSILGEMF---DLGIQLELSFYT 276
           A++ F RM  +  C P  ++F  V+  +I     D ++     +    D+ I   +  + 
Sbjct: 126 AIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFN 185

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            II  +C+   ++ AI LF+ M     +PD  TY  L++ LC+  R+D+A  +L++M + 
Sbjct: 186 LIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIE 245

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G  P+   F  ++ GLC+ G F      +++                      FL  C+ 
Sbjct: 246 GCFPSPATFNVLINGLCKKGDFTRVTKLVDN---------------------MFLKGCVP 284

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            ++         ++N  I  LC   ++ KA  LL RMV S  VP+  TY   + G  K  
Sbjct: 285 NEV---------TYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQG 335

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              D  RV   +  +  +++   YS LV GL +  K  EA+ +F      GC L++  ++
Sbjct: 336 RALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYS 395

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            L+ GLC  RK D+A+++ S     G +    T++ +M G  ++  +   + V   M   
Sbjct: 396 ALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKI 455

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
            CA +   Y +LI  + +  K+ +  + +  M+  G  PD     S++ GL D   +   
Sbjct: 456 NCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEA 515

Query: 637 SSGINKLV---SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
               N+++    DS+  D   YNIL N L K+   S+A  LL+ ML +G  PD  T
Sbjct: 516 LKLYNEMLCLEPDSQP-DVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVT 570



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 140/570 (24%), Positives = 264/570 (46%), Gaps = 30/570 (5%)

Query: 65  HLIRVLDNTNDL-------SSAL--KIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEM 115
           H  R L+  NDL       SS +  KIF        F+    T+  +I     + +   +
Sbjct: 32  HSSRTLNQNNDLENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSL 91

Query: 116 EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF-KLSVDVFNVVLG 174
           E +   M  E      ++   +  ++   +  N A+ +   M+   + K +V  FN VL 
Sbjct: 92  EKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLN 151

Query: 175 AIVEEKRGFADFVF-VYKEMVKA---GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            I++   GF D     Y  +V A    I+PNV + N +++ + +   +++A++ FR M  
Sbjct: 152 VIIQA--GFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPV 209

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           + C P++ T+  ++ GL    R+D++VS+L EM   G     + +  +I  LC++     
Sbjct: 210 RKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTR 269

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
             +L   M     +P+E+TY  LI+ LC   +LD A  +L+ M+     P +  +  I+ 
Sbjct: 270 VTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIIN 329

Query: 351 GLCEVGKF--DESVNFLEDKCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRKIA- 405
           GL + G+      V  L ++ GY+ +   ++ L+      GK   A  + ++  D+    
Sbjct: 330 GLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKL 389

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           +   ++  +  LC + +  +A ++L  M      P+  T+S+ + G  ++ N   A+ V+
Sbjct: 390 NTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVW 449

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           + ++  +   + + YS L+ GLC+  K+ EA+ V+  M   GC     +++ +I GLC  
Sbjct: 450 KDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDA 509

Query: 526 RKVDKAIRLRS--LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCAL 580
             V++A++L +  L     +     TY  +   L K   + RA DL   L  ML  GC  
Sbjct: 510 GSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDL---LNSMLDRGCDP 566

Query: 581 DVEAYCILIQSMSEQ-NKLKDCALFFNVMV 609
           D+    I ++ + E+ +  +D A F + +V
Sbjct: 567 DLVTCNIFLRMLREKLDPPQDGAKFLDELV 596



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 142/353 (40%), Gaps = 42/353 (11%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+N+ I+ +C+   +  A EL   M V   VPD  TY   + G CK+   ++A+ +  ++
Sbjct: 183 SFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEM 242

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +       +++ L+ GLC+    T   ++   M   GC  +  ++N LI+GLC+  K+
Sbjct: 243 QIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 302

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM--------------- 573
           DKA+ L     SS       TY  I+ GLVK  RA D   VL  M               
Sbjct: 303 DKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVL 362

Query: 574 --------------------LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
                               + +GC L+   Y  L+  +    K  +     + M   G 
Sbjct: 363 VSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGC 422

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+  T  SL+ G  +    H        +   +   +   Y++LI+GL K+G   +A  
Sbjct: 423 APNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMM 482

Query: 674 LLDLMLGKGWVPDATTH-----GLLVGSSVGEEID--SRRFAFDSSSFPDSVS 719
           +   ML  G  PD   +     GL    SV E +   +     +  S PD ++
Sbjct: 483 VWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVIT 535



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 458 YEDALRVFRQVSA---QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           ++ AL  +  V      +++ + +S++ +++ +C++  +  A+E+F  M    C   + +
Sbjct: 159 HDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYT 218

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  L+ GLC + ++D+A+ L       G   + +T+  ++ GL K      +  ++  M 
Sbjct: 219 YCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMF 278

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           ++GC  +   Y  LI  +  + KL       + MV +  VP+  T  ++++GL    +  
Sbjct: 279 LKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGR-- 336

Query: 635 LVSSGINKLVSDSE---VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
               G   LV   E   +++  +Y++L++GL+KEG + +A  L    + KG   +   + 
Sbjct: 337 -ALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYS 395

Query: 692 LLV 694
            LV
Sbjct: 396 ALV 398



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 125/307 (40%), Gaps = 64/307 (20%)

Query: 122 MVKERYPNVREALIS-LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           +++ER   V E + S LV       +   AMR+       G KL+  +++ ++  +  ++
Sbjct: 346 LMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDR 405

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           +   + + +  EM   G  PN  T + L++  FE      A++ ++ M K  C  N   +
Sbjct: 406 KP-DEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCY 464

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM-- 298
            ++I GL  + +V +++ +  +M   G + ++  Y+ +I  LC    +EEA++L+  M  
Sbjct: 465 SVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLC 524

Query: 299 --------------------------RALDLM---------PDELT-------------- 309
                                     RA+DL+         PD +T              
Sbjct: 525 LEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDP 584

Query: 310 -------YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
                   +EL+  L +  R   A+ I+E M+   L+P    +  +V  LC+  K    +
Sbjct: 585 PQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVI 644

Query: 363 NFLEDKC 369
               DKC
Sbjct: 645 ----DKC 647



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 6/250 (2%)

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS-KNGCSLSSSSFNILIYG 521
           +V  ++  ++ V    S+  + +   +     +A+E+F  MS +  C  +  SFN ++  
Sbjct: 93  KVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNV 152

Query: 522 LCVMRKVDKAIRLRSL---AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           +      D+A+   +    A          ++  I+  + KL    + + +  +M V  C
Sbjct: 153 IIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKC 212

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D   YC L+  + + +++ +     + M   G  P   T   L++GL        V+ 
Sbjct: 213 VPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTK 272

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            ++ +     V +   YN LI+GL  +G   +A  LLD M+    VP+  T+G ++   V
Sbjct: 273 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLV 332

Query: 699 --GEEIDSRR 706
             G  +D  R
Sbjct: 333 KQGRALDGAR 342


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 230/497 (46%), Gaps = 11/497 (2%)

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           LE   +    ++A      M ++GC  N+ T+ ++I GL  +  V+++     +M D G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             +   Y  +I  LC+  +  EA  L   M   +L P+ + Y  LI+        D+A  
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           ++++M+  G+ P    + ++VRGLC++G+ D +   L+        P    +N ++E   
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 385 NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                  A  +L +M +  I+ +  +++I I  LC++ E  KA +LL  M    + P+  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+  + G C+  N   A  +F +++  +++ D   Y+ L+ GL +V ++ E+ + F  M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G   +  +++ LI+G      ++ A +L      +G       Y  ++    K    
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           + +      ML +G  LD   Y ILI ++S    ++      + + K G VPD     SL
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 624 LHGL---ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           + GL   AD  +   +   ++K   D  ++    YN LI+GL K G  S A  + + +L 
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIV---CYNALIDGLCKSGDISYARNVFNSILA 705

Query: 681 KGWVPDATTHGLLVGSS 697
           KG VP+  T+  L+  S
Sbjct: 706 KGLVPNCVTYTSLIDGS 722



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 218/473 (46%), Gaps = 35/473 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM  AGI PNV T + ++  L ++   E A D    M  KG  PN+  +  +I G     
Sbjct: 422 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 481

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V  +  I  +M  + +  +L  Y  +I  L +  ++EE+ + F  M+   L+P+E TY 
Sbjct: 482 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 541

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+   +N  L+ A  +++ M+  GL P D +++D++              F  D    
Sbjct: 542 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY-----------FKSDDIEK 590

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
           V+S   ++L+                 M D +I     + I I  L  +  +  A+ +L 
Sbjct: 591 VSSTFKSMLDQGV--------------MLDNRI-----YGILIHNLSSSGNMEAAFRVLS 631

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            +  +  VPD   YS+ + G CK  + E A  +  ++S + +  + + Y+ L++GLC+  
Sbjct: 632 GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 691

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            I+ A  VF  +   G   +  ++  LI G C +  +  A  L +   ++G +     Y+
Sbjct: 692 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 751

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +  G       +  + ++ +M + G A  + ++  L+    ++ K+++     +V++  
Sbjct: 752 VLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGR 810

Query: 612 GLVPDRETMLSLLHGLADG---SQLHLVSSGINKLVSDSEVLD-SSMYNILIN 660
           GLVP+  T+ +++ GL++    S++H +   + +  S+S     SS++  +IN
Sbjct: 811 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 863



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 130/556 (23%), Positives = 241/556 (43%), Gaps = 16/556 (2%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           A +VLV M   G  L+   +NV++  +     VEE  GF       K+M   G+VP+  T
Sbjct: 241 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK------KDMEDYGLVPDGFT 294

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
              L+  L ++ R   A      M      PN   +  +I G +     D++  ++ EM 
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G+Q     Y  ++  LC+  +++ A  L K M      PD +TY  +I     +    
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
           DA  +L +M   G++P    +  ++ GLC+ G+ +++ + LE+       P    +  L+
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
              C  G   LA  I +KM    +  D   +N  I  L +   + ++ +   +M    ++
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TYS  + G  K  + E A ++ +++    L  + + Y  L+E   + + I +    
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M   G  L +  + ILI+ L     ++ A R+ S    +G+      Y+ ++ GL K
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 654

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
               +    +L +M  +G   ++  Y  LI  + +   +      FN ++  GLVP+  T
Sbjct: 655 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 714

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             SL+ G      +       N++++     D+ +Y++L  G    G   QA +L++ M 
Sbjct: 715 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 774

Query: 680 GKGWVPDATTHGLLVG 695
            +G    ++ + L+ G
Sbjct: 775 LRGHASISSFNNLVDG 790



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 2/322 (0%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           H + LE  C   +F  AK +L +M +R    +  ++N+ I  LC +  + +A+     M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +VPD  TY A + G CK     +A  +  ++S   L  + + Y+ L++G  +     
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA ++   M   G   +  +++ L+ GLC M ++D+A  L            T TY  I+
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G  +    KD   +L++M   G + +V  Y I+I  + +  + +  +     M   GL 
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P+      L+ G      + L     +K+   + + D   YN LI GL K G   +++  
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 675 LDLMLGKGWVPDATTH-GLLVG 695
              M  +G +P+  T+ GL+ G
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHG 546



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/374 (20%), Positives = 152/374 (40%), Gaps = 57/374 (15%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + M+  G+ PN      LLE  F+++ IE     F+ M  +G   ++R + I+I  L ++
Sbjct: 561 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 620

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             ++ +  +L  +   G   ++  Y+ +I  LC+    E+A  +   M    + P+ + Y
Sbjct: 621 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 680

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+ LC++  +  A ++   ++  GL P    +  ++ G C+VG    +     +   
Sbjct: 681 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 740

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
              +P    ++ L   C +AG    A  ++E+M  R  A   S+N  +   C+  ++++ 
Sbjct: 741 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQET 800

Query: 427 YELLGRMVVSSVVPDCATYSAFVLG----------------------------------- 451
            +LL  ++   +VP+  T    + G                                   
Sbjct: 801 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 860

Query: 452 ------------------KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                              CK  N + AL +   + A+S  +   SY  +V+ LC+  K+
Sbjct: 861 MINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 920

Query: 494 TEAVEVFCCMSKNG 507
           +EA+ +   M K G
Sbjct: 921 SEALNLLKEMDKRG 934


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 221/516 (42%), Gaps = 75/516 (14%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N LL++L    R E  +  FRR+  + C PN+ ++  ++K L    ++D + S + EM
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
               +  ++  Y  +I  LC+  ++  AI  F+ M      PD +TY  L+  LC+N R+
Sbjct: 62  AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRV 117

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
             A  +   M   G+TP+D  +  ++   C++ +F+ +                      
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG-------------------- 157

Query: 384 CNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
                      +L+ MA RK +    S+   I  LC+N ++ +AY+L   M ++   PD 
Sbjct: 158 -----------LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 206

Query: 443 ATYSAFVLGKC---KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            TY+  + G C   +L   +D L V  +   Q    D I+++ L+EGLC  ++I EA  +
Sbjct: 207 VTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQP---DKITFTALIEGLCTTDRIKEAFVL 263

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKV------------------------------- 528
           F  M+K GC+    +  +L+  LC++RK+                               
Sbjct: 264 FQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRR 323

Query: 529 --DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
             D+A RL       G      TYT    GL   +          +ML +G   D+ AY 
Sbjct: 324 GFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYN 383

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           +L+    + ++L         M ++GL P+  T  +L+       ++  +   ++ +VS 
Sbjct: 384 VLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 443

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
               D + ++ L+ GL+  G    A   L+L + +G
Sbjct: 444 GRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 183/451 (40%), Gaps = 67/451 (14%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++ +L R  + E+ + +F+ + + D  P+ L+Y  L+  LC   ++D A   + +M    
Sbjct: 6   LLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK 65

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           L P    +  ++  LC+  +   ++ F E      T P                      
Sbjct: 66  LVPDVFTYNVVIDTLCKARRISRAIEFFE------TMPE--------------------- 98

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                   D  ++N  +  LC+N  + +A  L G M  + + P   TY+  +   CK+C 
Sbjct: 99  -------PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQ 151

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           +E A  + + ++++       SY  ++ GLC+  K+ +A ++F  M   GC     ++N 
Sbjct: 152 FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNT 211

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI+GLCV +++ +A  L ++   +G      T+T ++ GL    R K+  V+   M  +G
Sbjct: 212 LIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 271

Query: 578 CALDVEAYCILIQSMSEQNKLKDC---------------------------------ALF 604
           CA D+  + +L+  +    KL+                                   A  
Sbjct: 272 CAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARL 331

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              M + G+ P+  T  +   GL D  +         +++      D   YN+L++G  K
Sbjct: 332 LQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCK 391

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
                 A  ++  M   G  P+  T+  LVG
Sbjct: 392 ADRLDMAEKMVRYMDQSGLPPNIVTYNTLVG 422



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 199/464 (42%), Gaps = 30/464 (6%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSF-------VNHY 145
           +  A +YC ++  L   G +++       M        RE L+  VF++           
Sbjct: 32  KPNALSYCYLVKALCRTGKIDKACSTIAEMA-------REKLVPDVFTYNVVIDTLCKAR 84

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++ A+     M        V  +N +LG + +  R  A    ++  M  AGI P+  T 
Sbjct: 85  RISRAIEFFETMPEP----DVVTYNTLLGGLCKNGR-VAQACSLFGSMEGAGITPSDVTY 139

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++V  +  + E+A    + M  + C P   ++  +I GL  N +VD +  +  EM  
Sbjct: 140 TTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKL 199

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G + +   Y  +I  LC + +L EA  L  +M      PD++T+  LI  LC   R+ +
Sbjct: 200 AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKE 259

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL----- 380
           A  + + M   G  P       +V  LC + K   +++ + +   Y   P   +L     
Sbjct: 260 AFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRN---YPACPEAVILYTPIF 316

Query: 381 -ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
            E     G F  A  +L+KMA R +  +  ++    + L + +E  +AY    RM+   +
Sbjct: 317 RELGRRRG-FDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGI 375

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD   Y+  V G CK    + A ++ R +    L  + ++Y+ LV   C+  K+    E
Sbjct: 376 EPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGE 435

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +   M   G     ++++ L+ GL ++ + D A    +LA S G
Sbjct: 436 LLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 96/258 (37%), Gaps = 10/258 (3%)

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++ + L++ L +  +  + V VF  +    C  ++ S+  L+  LC   K+DKA    + 
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
                      TY  ++  L K +R    +     M       DV  Y  L+  + +  +
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP----DVVTYNTLLGGLCKNGR 116

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           +      F  M  AG+ P   T  +L+       Q       +  + S         Y  
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSS 712
           +INGL K     QA  L + M   G  PD  T     HGL V   + E  D      ++ 
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 713 SFPDSVS-DILAEGLGNT 729
             PD ++   L EGL  T
Sbjct: 237 FQPDKITFTALIEGLCTT 254


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 139/592 (23%), Positives = 270/592 (45%), Gaps = 17/592 (2%)

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           V++   LC  M +E+  +V E +++    F+N   V   +R    +  GGF L +   N 
Sbjct: 222 VDKYGELCSAM-REQPFSVYEFVMN---RFMNKGEVEMGLRFHKALVQGGFGLDIITCNK 277

Query: 172 VLGAI-VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           +L  I ++   G AD  F    +V+ G  PNV T + L++   +   ++ A   F  M  
Sbjct: 278 ILKGIWMQNDIGVADDYF--NMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAG 335

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            G  P+   + I+I GL    R++D   +L    D GI+L++  ++  +    +   L  
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGR 395

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
            I+++K M    + P+ ++   LI   C+N R+ +A  +   ++ +G  P+   +  ++ 
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIA 455

Query: 351 GLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA- 405
           G C+ G   +     ED    +C   T  ++ L+   C  G    A     +  +R ++ 
Sbjct: 456 GFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSP 515

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           +  + N  +   C  + I  A ++   M + ++  D  TY+  + G  +    ++AL +F
Sbjct: 516 NVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLF 575

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            Q+  +    D I+Y  L++GLC+++K +  + +F  M KN  +   + +N+LI      
Sbjct: 576 FQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSRE 635

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             ++ A+ L       G      T+  ++      +R  D + + A+M  E    +   +
Sbjct: 636 GHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITF 695

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI---NK 642
            ILI +   + ++ D  L F+ M++ G  P+  T   L+HG      +  + SG+   N+
Sbjct: 696 TILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSM--MESGLKLYNE 753

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++ ++   +   Y+ILI+GL K GL  +AS      L K  +PD   + +L+
Sbjct: 754 MLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILI 805



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 122/572 (21%), Positives = 244/572 (42%), Gaps = 38/572 (6%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           D+ +  KI K + +Q      AD Y  M++++G   NV     L     KE   N+ +A 
Sbjct: 271 DIITCNKILKGIWMQNDIG-VADDYFNMVVRIGPKPNVVTFSTLIDAYCKEG--NLDKAF 327

Query: 135 I------------------SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
           +                   L+       R+    R+L+     G KL V  F+  + A 
Sbjct: 328 VLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAY 387

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
           V+        + +YK M+  GI PNV + + L++   +  RI  A   F ++ K G  P+
Sbjct: 388 VKIG-DLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPS 446

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
             T+  +I G   +  + D   +  +M     + +   Y+ +I  LC++  + +A+R F 
Sbjct: 447 ILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFF 506

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
                 L P+  T   L++  C    +  A  +   M ++ +      +  +++G  + G
Sbjct: 507 QAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFG 566

Query: 357 KFDESV---------NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-D 406
           + DE++         +F  D   Y T     L++  C   K     CI + M    +A D
Sbjct: 567 RVDEALMLFFQMLKKDFKPDVITYCT-----LIDGLCKLKKSSAGLCIFDFMCKNAVAPD 621

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
              +N+ I        +  A  L   +V     PD  T++  +   C     +DA+++F 
Sbjct: 622 IAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFA 681

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           +++++ L  ++I+++ L++  C+  ++ +A+ +F  M + G   +  +++ LI+G    +
Sbjct: 682 KMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQ 741

Query: 527 KV-DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            + +  ++L +    +  +    +Y+ ++ GL K    K+        L +    DV AY
Sbjct: 742 SMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAY 801

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            ILI+   +  +L +  + ++ M+   L PDR
Sbjct: 802 TILIRGYCKVGRLTEAMMLYDNMLLNRLTPDR 833



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 145/669 (21%), Positives = 263/669 (39%), Gaps = 82/669 (12%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL 137
           SA++ F+W         +A ++C +            +  L QN +  R   V +  I  
Sbjct: 96  SAIRFFEWAESFFISPLSAPSFCAL------------LHVLLQNQLFSRAACVFDKFI-- 141

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMV 194
              F N Y    A R       G   L     +VV G ++E    K  F   V ++  + 
Sbjct: 142 -MQFGNDYDTLDAFR------DGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVC 194

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             GI  + + +  LL  L +++ +E  +D++  +           +E V+   +    V+
Sbjct: 195 VKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVE 254

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
             +     +   G  L++     I+  +  +N +  A   F M+  +   P+ +T+  LI
Sbjct: 255 MGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLI 314

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-------- 366
           +  C+   LD A  + + M   G+TP   V+  ++ GL + G+ ++    L         
Sbjct: 315 DAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIK 374

Query: 367 -DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
            D  G+ ++     ++     G       I ++M +  I+ +  S +I I+  C+N  I 
Sbjct: 375 LDVVGFSSA-----MDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRIL 429

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  L  +++     P   TYSA + G CK  N  D   ++  +  +    D+I YS L+
Sbjct: 430 EACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLI 489

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+   + +A+  F      G S +  + N L+   C ++ +  A+++  L       
Sbjct: 490 NGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIK 549

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             T TYT ++ G  +  R  + L++  QML +    DV  YC LI  + +  K       
Sbjct: 550 ADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCI 609

Query: 605 FNVMVKAGLVPD------------RETMLSLLHGLADGSQLHLVSSG------------- 639
           F+ M K  + PD            RE  L    GL     +H+V  G             
Sbjct: 610 FDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLF----VHVVERGPKPDVFTFNTMIC 665

Query: 640 --------------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                           K+ S+    ++  + ILI+   +EG    A  +   ML +G  P
Sbjct: 666 CYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEP 725

Query: 686 DATTHGLLV 694
           +  T+  L+
Sbjct: 726 NLVTYSCLI 734



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 2/220 (0%)

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           +++S L++  C+   + +A  +F  M+ NG +     ++ILI GL    +++   RL  +
Sbjct: 308 VTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLV 367

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           A   G       ++  M   VK+     ++ +  +ML EG + +V +  ILI+   +  +
Sbjct: 368 ALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427

Query: 598 -LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            L+ C LF  ++ K G  P   T  +L+ G      L         ++      D+ +Y+
Sbjct: 428 ILEACGLFVQIL-KLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYS 486

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +LINGL K+GL   A       + +G  P+  T   L+ S
Sbjct: 487 VLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDS 526


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/520 (22%), Positives = 245/520 (47%), Gaps = 12/520 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +LG++ + K+ +   + + K+M   GI  N  TLN L+       ++  +     ++
Sbjct: 13  FNKILGSLAKMKQ-YLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKI 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ T   ++KGL     V  S+    ++   G Q++   Y  ++  LC+  + 
Sbjct: 72  LKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGET 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A++L +M+      P+ + Y  +I+ LC++  +++A D+  +M   G+ P    +  +
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C +G+   + + L++      +P    +N L+   C  G    AK +L  M    I
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                +++  +   C   E++ A ++   MV   V P+  +Y+  + G CK    ++A+ 
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           + R++  +++V D+++Y+ L++GLC+  +IT A+ +   M   G      ++  L+  LC
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             + +DKA  L       G   T  TYT ++ GL K  R K+   +   +LV+GC +DV 
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 431

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y ++I  + ++    +     + M   G +P+  T   ++  L +  +       ++++
Sbjct: 432 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491

Query: 644 VSDS-EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           ++    VLD  + ++ +     +    +A  LL  M+ KG
Sbjct: 492 IAKGLLVLDFKVADVFV-----QNENDKAEKLLHEMIAKG 526



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 217/498 (43%), Gaps = 32/498 (6%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P +   N +L  L +  +  +A+   ++M  KG   N  T  I+I       ++  S S+
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           LG++  LG Q +      ++  LC + ++++++     + A     D ++Y  L+N LC+
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
                 A  +L  +      P   ++  I+ GLC+    D+ VN   D            
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCK----DKLVNEAYD------------ 171

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
                          +  +M  R I  D  ++   I   C   ++  A+ LL  M++ ++
Sbjct: 172 ---------------LYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNI 216

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P    Y+  +   CK  N ++A  +   ++ + +    ++YS L++G C V ++  A +
Sbjct: 217 NPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQ 276

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +F  M + G + +  S+NI+I GLC  ++VD+A+ L            T TY  ++ GL 
Sbjct: 277 IFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLC 336

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K  R    L ++ +M   G   DV  Y  L+ ++ +   L      F  M + G+ P   
Sbjct: 337 KSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY 396

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T  +L+ GL  G +L         L+     +D   Y ++I+GL KEG+  +A  +   M
Sbjct: 397 TYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKM 456

Query: 679 LGKGWVPDATTHGLLVGS 696
              G +P+A T  +++ S
Sbjct: 457 EDNGCIPNAVTFEIIIRS 474



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 39/348 (11%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           A TY  +I    L G +     L   M+ K   P V    I L+ +      V  A  +L
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNI-LINALCKEGNVKEAKNLL 243

Query: 155 VNMNSGGFKLSVDVFNVVLGA--IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
             M   G K  V  ++ ++    +V E +       ++  MV+ G+ PNV + N ++  L
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQ---IFHAMVQMGVNPNVYSYNIMINGL 300

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +  R++ A++  R M  K   P++ T+  +I GL  + R+  +++++ EM   G   ++
Sbjct: 301 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 360

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             YT ++  LC+   L++A  LF  M+   + P   TY  LI+ LC+  RL +A ++ + 
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 420

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           ++V G       +  ++ GLC+ G FDE++                              
Sbjct: 421 LLVKGCCIDVWTYTVMISGLCKEGMFDEAL------------------------------ 450

Query: 393 KCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
             I  KM D   I +  ++ I IR L E +E  KA +LL  M+   ++
Sbjct: 451 -AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 152/647 (23%), Positives = 279/647 (43%), Gaps = 56/647 (8%)

Query: 61  LSPDHLIRVL-DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
           L+P  + RVL +   D   A K FKW   +  F+H+ ++YC +   L  A    +   + 
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165

Query: 120 QNMVKERYP-NVREALISLVFSFVNHYRVNGAM-RVLVNMNSGGFKLSVDVFNVVLGAIV 177
           + MV  +   +V + L S     V  + V  A+  VL+++  G  + ++  F+ +    V
Sbjct: 166 KEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL--GMLEEAIQCFSKMKRFRV 223

Query: 178 EEK--------RGFA------DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
             K          FA      D    +K+M+ AG  P V T N +++ + +   +E+A  
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F  M  +G  P++ T+  +I G     R+DD+V    EM D+  + ++  Y  +I   C
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +  KL   +  ++ M+   L P+ ++Y  L++  C+   +  A     DM  +GL P + 
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
            +  ++   C++G   ++                           F L   +L+   +  
Sbjct: 404 TYTSLIDANCKIGNLSDA---------------------------FRLGNEMLQVGVEWN 436

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           +    ++   I  LC+ E +++A EL G+M  + V+P+ A+Y+A + G  K  N + AL 
Sbjct: 437 VV---TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  + +  D + Y   + GLC +EKI  A  V   M + G   +S  +  L+    
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCAL 580
                 + + L           T  T+  ++ GL K   + +A D    ++     G   
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF--GLQA 611

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG-LADGSQLHLVSSG 639
           +   +  +I  + + N+++     F  MV+ GLVPDR    SL+ G    G+ L  ++  
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            +K+      LD   Y  L+ GL       +A   L+ M+G+G  PD
Sbjct: 672 -DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 123/541 (22%), Positives = 239/541 (44%), Gaps = 27/541 (4%)

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           +M   GFK SV+ + +V   I+   R + D   V KEMV +    +V       +VL+ T
Sbjct: 132 SMTRNGFKHSVESYCIV-AHILFCARMYYDANSVLKEMVLSKADCDV------FDVLWST 184

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             +              C P    F+ +   LI    +++++    +M    +  +    
Sbjct: 185 RNV--------------CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             ++    +  K ++  R FK M      P   TY  +I+C+C+   ++ A  + E+M  
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            GL P    +  ++ G  +VG+ D++V F E+       P    +NAL+ C C  GK  +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                 +M    +  +  S++  +   C+   +++A +    M    +VP+  TY++ + 
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK+ N  DA R+  ++    +  + ++Y+ L++GLC  E++ EA E+F  M   G   
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           + +S+N LI+G    + +D+A+ L +     G       Y   + GL  L++ +   VV+
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G   +   Y  L+ +  +     +     + M +  +     T   L+ GL   
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590

Query: 631 SQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             +       N++ +D  +  +++++  +I+GL K+     A+ L + M+ KG VPD T 
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650

Query: 690 H 690
           +
Sbjct: 651 Y 651



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 111/262 (42%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+ +   P   TY+  +   CK  + E A  +F ++  + LV D+++Y+ +++G  +V +
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + + V  F  M    C     ++N LI   C   K+   +        +G      +Y+ 
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++    K    +  +     M   G   +   Y  LI +  +   L D     N M++ G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           +  +  T  +L+ GL D  ++        K+ +   + + + YN LI+G  K     +A 
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            LL+ + G+G  PD   +G  +
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFI 514



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 122/302 (40%), Gaps = 39/302 (12%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L  A  ++E E L   M      PN+  +  +L+  FV    ++ A+ +L  
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL-ASYNALIHGFVKAKNMDRALELLNE 497

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           +   G K  + ++   +  +   ++  A  V V  EM + GI  N      L++  F++ 
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV-VMNEMKECGIKANSLIYTTLMDAYFKSG 556

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQLELSFY 275
                L     M +        TF ++I GL  N  V  +V     +  D G+Q   + +
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDE---------------------------- 307
           T +I  LC++N++E A  LF+ M    L+PD                             
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676

Query: 308 -------LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
                  L Y  L+  L    +L  A   LE+MI  G+ P + + + +++   E+G  DE
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 736

Query: 361 SV 362
           +V
Sbjct: 737 AV 738



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 6/255 (2%)

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           C+  D L   R V      +    +S L++    +  + EA++ F  M +      + S 
Sbjct: 175 CDVFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSC 230

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N L++    + K D   R       +G   T  TY  ++  + K    +    +  +M  
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   D   Y  +I    +  +L D   FF  M      PD  T  +L++      +L +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
                 ++  +    +   Y+ L++   KEG+  QA      M   G VP+  T+  L+ 
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410

Query: 696 SS--VGEEIDSRRFA 708
           ++  +G   D+ R  
Sbjct: 411 ANCKIGNLSDAFRLG 425


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 139/592 (23%), Positives = 251/592 (42%), Gaps = 78/592 (13%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQK-RFQHTADTYCKMILKLGLA 109
           EA +  LR  +S D ++++     D   A ++F+ +S  +  FQH+  T   ++      
Sbjct: 13  EAAVGRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFART 72

Query: 110 GNVEEMEGLCQNMVKERY-PNVR---------------EALISLVFSFVNHYRVNGAMR- 152
               E   L +N +   + P+V                E   +++      Y V  +++ 
Sbjct: 73  KRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKT 132

Query: 153 -------------VLVNMN------SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
                        VL  M+      + G  + +  +  ++  + + K+   D V + +++
Sbjct: 133 HNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKK-IQDAVALMEKI 191

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
              G  P + T N LL  L +  R+E A+D  R++   GC P+  T+  +I GL    R 
Sbjct: 192 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 251

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            ++  +  EM   G+ L+   YT +I  L +  K+ +A  ++K M +   +PD +T   +
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 311

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+ LC+  R+  A  I + M   GL P + V+  ++ GLC+  K D              
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD-------------- 357

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYEL 429
                               C LE +A  K A C     ++NI I  LC++ ++  A   
Sbjct: 358 --------------------CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 397

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              M+ +   PD  TY+  V G CK  N + A  VF  +S+     + ++Y  L+ GLC+
Sbjct: 398 FDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCK 457

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             ++T+A   F  M + GC   S  ++ L+ GLC   K++    L      SG +  + T
Sbjct: 458 RRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQT 516

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
            T+++  L K  R  + + +   +  EG      AY  +I ++ +  K+  C
Sbjct: 517 RTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISTLIKSAKVNPC 567



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 222/498 (44%), Gaps = 21/498 (4%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G   +V T N LL+V   T R   A +  +        P+  T+ ++I G       +++
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 257 VSILGEMF-DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +++ EM  D G+   L  +  ++  LC+  K+  A+  F+         D  TY  +++
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGY 371
            L +N ++ DA  ++E +   G TPT   +  ++ GLC++G+ +E+++ L    ++ C  
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
               + +L++      + F A  + ++MA R +  D   +   IR L +  +I +A  + 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M     VPD  T S  + G CK      A+R+F+ + A+ L  + + YS L+ GLC+ 
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+  A+E+   M K  C+  + ++NILI GLC    V+ A         +G      TY
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ G  K         V   M    C+ +V  Y  LI  + ++ +L   +L+F  M +
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473

Query: 611 AGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDSSMYNI--------- 657
            G  PD     SL+ GL    +L     L        V++S+     ++++         
Sbjct: 474 RGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEA 533

Query: 658 --LINGLWKEGLTSQASY 673
             L N + KEG+    +Y
Sbjct: 534 VSLFNAIRKEGMPHPYAY 551



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 198/435 (45%), Gaps = 6/435 (1%)

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G Q  +     ++ +  R  +  EA  L K   A   +PD  T+  LI   C     ++
Sbjct: 53  FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112

Query: 326 ANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALL 380
           A  ++ +M    G+ P+      ++ GLC+ GK   +++  E    + C      + A++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172

Query: 381 ECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +      K   A  ++EK+ A+       ++N  +  LC+   + +A +LL ++V +   
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY++ + G  K     +A ++F++++ + LVLD++ Y+ L+ GL Q  KI +A  V
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           +  M+  GC     + + +I GLC   ++  A+R+     + G +     Y+ ++ GL K
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            ++    L +LAQM    C  D   Y ILI  + +   ++    FF+ M++AG  PD  T
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 412

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G              + + S     +   Y  LI+GL K    ++AS     M 
Sbjct: 413 YNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMK 472

Query: 680 GKGWVPDATTHGLLV 694
            +G  PD+  +  LV
Sbjct: 473 ERGCPPDSFVYSSLV 487


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 232/524 (44%), Gaps = 42/524 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L AIV+  + +   + + K+M   G+ PN+ TL+  +    +  R++       ++
Sbjct: 95  FAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKV 154

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P   TF  +I GL        +V +  +M   G Q ++  Y  II  LC+  + 
Sbjct: 155 IKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGET 214

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A  L K M      P+ +TY  LI+ LC +  +++A DI   M   G++P    +  +
Sbjct: 215 AAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSL 274

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           ++GLC+  ++ E+   L +       P     N L++  C  GK   A  +L+ M +  +
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  +++  +       ++ +A +L   M+     P+  +Y+  + G CK    ++A++
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  Q L  +++SY+ L+ G CQ+ K+ EA ++F  M  NG      +++IL+ G C
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454

Query: 524 VMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               + KA RL R++          STY K  L +                         
Sbjct: 455 KQGYLGKAFRLFRAM---------QSTYLKPNLVM------------------------- 480

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y IL+ +M +    KD    F+ +   GL P  +   ++++GL     L         
Sbjct: 481 --YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRN 538

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           + +D    D   YN++I GL +    S+A  L+  M  +G++ D
Sbjct: 539 MEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 198/457 (43%), Gaps = 46/457 (10%)

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           I L K M  + L P+  T    +NC C+  R+D    +L  +I +GL PT   F  ++ G
Sbjct: 113 ISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLING 172

Query: 352 LCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           LC+VG+F ++V   +D       P    +N ++   C  G+   A  +L+KM +   A C
Sbjct: 173 LCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEE---AGC 229

Query: 408 D----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                +++  I  LC +  + +A ++   M    + PD  TY++ + G CK   +++A  
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASA 289

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV------------------------ 499
           +  ++++ +++ D ++++ LV+  C+  K++EA+ V                        
Sbjct: 290 LLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYS 349

Query: 500 -----------FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
                      F  M   GC  +  S+NILI G C  +++D+A++L +     G +    
Sbjct: 350 LWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNV 409

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +Y  ++ G  +L + ++   +   M   G   D+  Y IL+    +Q  L      F  M
Sbjct: 410 SYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
               L P+      L+H +             ++L          +Y  +INGL KEGL 
Sbjct: 470 QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLL 529

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
            +A      M   G  PD  ++ +++   +  + +SR
Sbjct: 530 DEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESR 566



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/427 (21%), Positives = 170/427 (39%), Gaps = 43/427 (10%)

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT-SPH----N 377
           +DDA      M+     P    F  ++  + ++G++ + V  L  +   V  SP+    +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVS 436
             + C C   +  L   +L K+    +     ++   I  LC+  E  +A EL   MV  
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              PD  TY+  + G CK+     A  + +++       + ++YS L++ LC+   + EA
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 497 VEVFCCMSKNG---------------CSLSS--------------------SSFNILIYG 521
           +++F  M   G               C  S                      +FN+L+  
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            C   KV +A+ +       G      TY+ +M G        +   +   M+ +GC  +
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           + +Y ILI    +  ++ +    FN M+  GL P+  +  +L+HG     +L        
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVG 699
            + ++  + D   Y+IL++G  K+G   +A  L   M      P+   + +LV +    G
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492

Query: 700 EEIDSRR 706
              D+R+
Sbjct: 493 NHKDARK 499


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 159/710 (22%), Positives = 283/710 (39%), Gaps = 94/710 (13%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           I++HQ        +  R+ L+   ++ V++N  +    +K F W   Q  + HT   + K
Sbjct: 91  IETHQF------FRQFRNQLNDSLVVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDK 144

Query: 102 MILKLGLAGNVEEMEGL--CQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS 159
           ++  LG   N ++   L     +  + +  +R  L  LV     +   N A+  L  +  
Sbjct: 145 LLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKD 204

Query: 160 GGFKLSVDVFNVVLGAIVEE---------KRGFADFVFVYKE---------MVKAG---- 197
            G+K S   +N ++   +           KR    + FV            + K G    
Sbjct: 205 FGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCRE 264

Query: 198 ----------IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
                      VP+    N ++  L E +  E A+D   RM    C PN  T+ I++ G 
Sbjct: 265 AFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGC 324

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           +   ++     IL  M   G       +  +I   C+      A +LFK M      P  
Sbjct: 325 LRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGY 384

Query: 308 LTYEELINCLCENLRLDDANDILE-------DMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           L Y   I  +C N     ++DIL+       +M+ +G+        +  R LC  GKFD+
Sbjct: 385 LVYNIFIGSVCSNEE-QPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQ 443

Query: 361 SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN 420
           +                               K I E M    + D  +++  I +LC+ 
Sbjct: 444 AF------------------------------KIICEMMGKGFVPDDSTYSKVIGFLCDA 473

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            ++ KA+ L   M  + +VP   TY+  +   CK    + A + F ++  +    + ++Y
Sbjct: 474 SKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTY 533

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA----IRLRS 536
           + L+    + +++  A E+F  M   GC  +  ++  LI G C   +++KA     R+R 
Sbjct: 534 TALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRG 593

Query: 537 ------------LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
                       L +++       TY  ++ GL K  R K+   +L  ML  GC  +   
Sbjct: 594 DIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIV 653

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  +I    +  KL+D    F  M + G  P+  T  S +  L   ++L LV   ++K++
Sbjct: 654 YDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKML 713

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +S   +  +Y  +++GL K G T +A  L+  M  KG  P+  T+  ++
Sbjct: 714 ENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMI 763



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 128/561 (22%), Positives = 243/561 (43%), Gaps = 34/561 (6%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-EEKRGFAD 185
           YPN RE   SL+ ++      + A ++   M   G +    V+N+ +G++   E++  +D
Sbjct: 346 YPN-REIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSD 404

Query: 186 FV----FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            +      Y EM+  G+V N   ++     L    + + A      M  KG  P+  T+ 
Sbjct: 405 ILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYS 464

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            VI  L   S+V+ + S+  EM   GI   +  YT +I   C+   +++A + F  M   
Sbjct: 465 KVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHK 524

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+ +TY  LI+   +  ++  A+++ E M++ G  P    +  ++ G C+ G+ +++
Sbjct: 525 GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKA 584

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP-----IRW 416
                   G + S                     ++K       +C+  N+      +  
Sbjct: 585 CQIYARMRGDIESSD-------------------MDKYFKLDHNNCEGPNVITYGALVDG 625

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+   +++A+ELL  M+     P+   Y A + G CK+   +DA  VF ++S +    +
Sbjct: 626 LCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPN 685

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +YS  ++ L +  ++   ++V   M +N C+ +   +  ++ GLC + K D+A +L  
Sbjct: 686 LYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLML 745

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G +    TYT ++ G  K  + +  L +   M  +GCA +   Y +LI       
Sbjct: 746 KMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNG 805

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVSDSEVLDSSMY 655
            L +     + M +        +   ++ G    SQ  + S G +++L  +  V   S+Y
Sbjct: 806 LLDEAYKLLDEMKQTYWPKHILSHRKIIEGF---SQEFITSIGLLDELSENESVPVDSLY 862

Query: 656 NILINGLWKEGLTSQASYLLD 676
            ILI+   K G    A  LL+
Sbjct: 863 RILIDNYIKAGRLEVALDLLE 883



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 230/523 (43%), Gaps = 42/523 (8%)

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVN 148
           K F     TY K+I  L  A  VE+   L + M +    P+V    I L+ SF     + 
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI-LIDSFCKAGLIQ 512

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAGIVPNVDTLNY 207
            A +    M   G   +V  +  ++ A ++ K+   AD +F  + M+  G  PNV T   
Sbjct: 513 QARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF--EMMLLEGCKPNVVTYTA 570

Query: 208 LLEVLFETNRIESA---------------LDQFRRMHKKGC-CPNSRTFEIVIKGLIANS 251
           L++   +  +IE A               +D++ ++    C  PN  T+  ++ GL   +
Sbjct: 571 LIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKAN 630

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           RV ++  +L  M   G +     Y  +I   C+  KL++A  +F  M      P+  TY 
Sbjct: 631 RVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYS 690

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----ED 367
             I+CL ++ RLD    +L  M+    TP   ++ ++V GLC++GK DE+   +    E 
Sbjct: 691 SFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEK 750

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEI 423
            C      + A+++    +GK  + +C LE   D     C     ++ + I   C N  +
Sbjct: 751 GCNPNVVTYTAMIDGFGKSGK--IEQC-LELFRDMCSKGCAPNFITYRVLINHCCSNGLL 807

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA-QSLVLDSISYSK 482
            +AY+LL  M  +       ++   + G  +   +  ++ +  ++S  +S+ +DS+ Y  
Sbjct: 808 DEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSL-YRI 864

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF--NILIYGLCVMRKVDKAIRLRSLAYS 540
           L++   +  ++  A+++   +S +     S+ +    LI  L    KVDKA+ L +   S
Sbjct: 865 LIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMIS 924

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
                  S    ++ GL+K+ + ++ L    Q+    C +D+ 
Sbjct: 925 KNVVPELSILVHLIKGLIKVDKWQEAL----QLSDSICQMDIH 963



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 8/291 (2%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  +R  C N     A E LGR+      P   TY+A +    +    + A  V R++ +
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
            + V+D  + S     LC+  K  EA ++            +  +N ++ GLC     ++
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLI--DEAEDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ +     SS       TY  ++ G ++  +      +L+ M+ EGC  + E +  LI 
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ------LHLVSSGINKLV 644
           +  +          F  M+K G  P        +  +    +      L LV    ++++
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEML 417

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
               VL+    +     L   G   QA  ++  M+GKG+VPD +T+  ++G
Sbjct: 418 DLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIG 468


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 212/457 (46%), Gaps = 13/457 (2%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M + GC PNS TF  ++ G     R  D   +L  M   GIQ  +  Y  ++  LC+  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 288 LEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             EA  L + M  R     PD +TY  L++  C+  +++++ ++L+++I  GL P   ++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 346 VDIVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             ++  LC+  +  E++      +   C       N L+  CC      +A  +L+ MA 
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             + AD  ++N  +  LC+   +++A +LL RM  S   PD   YS+FV G CK     +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM-SKNGCSLSSSSFNILI 519
           A +V  Q+       + ++Y+ +++GLC+  KI  A+E+   M S +GC L+   ++ ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GLC + +  +A  +      +G      TY+ ++ GL K  + ++ +  + +M +EGC 
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV-----PDRETMLSLLHGLADGSQLH 634
            +   YC L+  +    +L +       M   G       P   T  +L+ GL    ++ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
                  ++ S     D   Y+ ++ GL + G   QA
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 208/441 (47%), Gaps = 14/441 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV  F    R     R+L  M + G + +V  +N +L  + + +R + +   + ++M+ 
Sbjct: 15  ALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER-WHEAEELVRDMIS 73

Query: 196 AG--IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            G    P++ T + LL    +  ++E + +  + +  +G  P++  +  V+  L  ++R+
Sbjct: 74  RGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARL 133

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            +++ +L EM   G    L  +  +I   CRE  LE A  L + M A  +  D +TY  L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTL 193

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           ++ LC+  RL +A  +LE M   G  P    +   V GLC+ GK   +   LE       
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDH 253

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAY 427
            P    +N +L+  C +GK   A  ++E+MA       +   ++  +  LC+    ++A 
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            ++  M  +   PD  TYS+ V G CK    E+A+   R+++ +    ++++Y  LV GL
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373

Query: 488 CQVEKITEAVEVFCCM-----SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           C   ++ EA  +   M       + C  S S++N LI GLC   ++D A++      S G
Sbjct: 374 CSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433

Query: 543 TSYTTSTYTKIMLGLVKLQRA 563
                 +Y+ I+ GL +  RA
Sbjct: 434 CDPDGVSYSTIVEGLARSGRA 454



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 207/444 (46%), Gaps = 19/444 (4%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +T+  L+N   +  R  D   +LE M   G+ P    +  ++ GLC++ ++ E+   
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 365 LEDKC--GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           + D    G  ++P    ++ LL   C AGK   ++ +L+++  R +  D   +   +  L
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C++  + +A ELL  M+ +   P   T++  + G C+  N E A  + + ++A  +  D 
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L++GLC+  ++ EA ++   M  +GC+    +++  +YGLC   KV  A ++   
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV-EGCALDVEAYCILIQSMSEQN 596
              S       TY  I+ GL K  +    L ++ QM   +GC L+V  Y  ++  + +  
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           + ++       M +AG  PD  T  SL++GL    ++      + ++  +    ++  Y 
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWV-----PDATTHGLLVGS--SVGEEIDSRRF-- 707
            L++GL   G  ++A  +++ M   G       P  +T+  L+G     G   D+ +F  
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427

Query: 708 -AFDSSSFPDSVS-DILAEGLGNT 729
                   PD VS   + EGL  +
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARS 451


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/527 (23%), Positives = 227/527 (43%), Gaps = 37/527 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N VL  +       AD + +Y+ M++  + P   T       L    R   AL   R M
Sbjct: 148 YNAVLSTLARAD-CHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGM 206

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + GC P++  ++ VI  L+A   V ++ ++L EM  +G   +++ +  ++  LC    +
Sbjct: 207 ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHV 266

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA RL                                   ++ M++ G TP+   +  +
Sbjct: 267 REAARL-----------------------------------VDRMMMHGCTPSVVTYGFL 291

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADC 407
           +RGLC   + DE+   L           N ++  C   GK   A  + E M  +    D 
Sbjct: 292 LRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDV 351

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++NI +  LC+      A  +L  M      P+  TYS  +   C+   ++DA  +  Q
Sbjct: 352 HTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQ 411

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +SA+   ++S  Y+ ++  L +  K+ EA+ +   M   GC     ++N +IY LC   +
Sbjct: 412 MSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQ 471

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D+A  +       G      TY  ++  L+   R ++ L +  +M++ GC LDV +Y  
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNG 531

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI+++ ++  +    +    M+  G+ P+  +   L++ L    ++        ++++  
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              D   YN LINGL K G T  A  LL+ +  +   PD  T+ +L+
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 270/592 (45%), Gaps = 11/592 (1%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALIS-LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G  EE+E   +   K R   V  A  S LV +      +N A  +L  M   G+  S   
Sbjct: 234 GKFEEVEKFFKE-AKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGT 292

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +  V+ A V++   F + + +  EMV  G+  NV     L++       +  AL  F  +
Sbjct: 293 YTAVIVACVKQGN-FVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV 351

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G  P+   F ++I G      ++ +  +   M  +GIQ  +     ++     +N L
Sbjct: 352 VEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLL 411

Query: 289 EEAIRLFKMMRALDL-MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           E A  LF    A++  + + +TY  L+  L E  ++++A ++ E M+  G+TP+   + +
Sbjct: 412 EHAYGLFD--EAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNN 469

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C+ G  D++ + L+        P    +  L++     G    A  + E+M    
Sbjct: 470 LILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAAN 529

Query: 404 IADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           IA  D ++N  I  L +   + +  + L   +    V    TY++ + G  K    + AL
Sbjct: 530 IAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSAL 589

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             +R++    +  D I+Y+ L++GLC+  KI  A+E+   M   G  L   +++ LI G 
Sbjct: 590 LAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGF 649

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C M  ++ A +  +     G +  T  Y  ++ G + L   +  L +  +M+      D+
Sbjct: 650 CKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDL 709

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
           + Y  +I  + ++ KL      ++ M+   +VPD      L++GL++  QL   S  + +
Sbjct: 710 QVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKE 769

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  ++      +YNILI G ++EG   +A  L D ML KG VPD TT+ +LV
Sbjct: 770 MDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 166/778 (21%), Positives = 299/778 (38%), Gaps = 136/778 (17%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE---EMEGLCQNM 122
           L+ +L + ++  SALK F  V  ++ F  T D +  +++ + L+ N +    ++ L  N 
Sbjct: 64  LVTLLSHKSNPKSALKFFHQVERKRGFVKTVD-FISLLIHI-LSSNSKTCSSLQFLLNNY 121

Query: 123 VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           V        +  +  +      Y               GF+    VFN +L + V   + 
Sbjct: 122 VFGDATPSAKVFVECLLECSGRY---------------GFESDSRVFNYLLKSFVRVNK- 165

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
             D V  ++ M++  +VP V  +N LL  +   N +  A   +  M ++G   +  T  +
Sbjct: 166 ITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHV 225

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           V++  +   + ++      E    G++++ + Y+ ++  +CR   L  A  L K MR   
Sbjct: 226 VMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFG 285

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK----- 357
            +P + TY  +I    +     +A  + ++M+ +GL     V   +++G C +G      
Sbjct: 286 WVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLAL 345

Query: 358 --FDESV-----------NFLEDKCGYV-----------------TSPH----NALLECC 383
             FDE V           + L + C  V                   P+    N+LLE  
Sbjct: 346 QLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF 405

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                   A  + ++  +  I +  ++NI ++WL E  ++ +A  L  +MV   + P   
Sbjct: 406 HEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLV 465

Query: 444 TYSAFVLGKCKLC-----------------------------------NYEDALRVFRQV 468
           +Y+  +LG CK                                     + E A  VF Q+
Sbjct: 466 SYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQM 525

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            A ++     +++ ++ GL +  +++E  +      K G   +S ++N +I G      V
Sbjct: 526 MAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAV 585

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D A+        SG S    TYT ++ GL K  +    L + + M  +G  LDV AY  L
Sbjct: 586 DSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSAL 645

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVP--------------------------------- 615
           I    + + ++  + FF  ++  GL P                                 
Sbjct: 646 IDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKV 705

Query: 616 --DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
             D +   S++ GL    +L L     ++++S   V D  MY +LINGL   G    AS 
Sbjct: 706 PCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASK 765

Query: 674 LLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRF-----AFDSSSFPDSVS-DILAEG 725
           +L  M G    P    + +L+  +  E      F       D    PD  + DIL  G
Sbjct: 766 ILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/418 (22%), Positives = 176/418 (42%), Gaps = 47/418 (11%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ E V+ GI  NV T N LL+ L E  ++  A + + +M  KG  P+  ++  +I G  
Sbjct: 417 LFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHC 475

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +D + S+L  + + G++     YT +I    ++   E A  +F+ M A ++ P + 
Sbjct: 476 KKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDH 535

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           T+  +IN L +  R+ +  D L + I  G   T   +  I+ G  + G  D ++    + 
Sbjct: 536 TFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREM 595

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA----DCDSWNIPIRWLCEN 420
           C    SP    + +L++  C + K  LA   LE  +D K      D  +++  I   C+ 
Sbjct: 596 CESGISPDVITYTSLIDGLCKSNKIGLA---LEMHSDMKYKGMKLDVVAYSALIDGFCKM 652

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV---------------- 464
            ++  A +    ++   + P+   Y++ + G   L N E AL +                
Sbjct: 653 HDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVY 712

Query: 465 -------------------FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
                              + ++ ++ +V D + Y+ L+ GL    ++  A ++   M  
Sbjct: 713 TSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDG 772

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           N  + S   +NILI G      + +A RL       G     +TY  ++ G +K+   
Sbjct: 773 NNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 120/274 (43%), Gaps = 13/274 (4%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEE----MEGLCQNMVKERYPNVREALISLVFSFVN 143
           I++ F  T+ TY  +I      G V+        +C++ +    P+V     SL+     
Sbjct: 561 IKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGIS---PDVI-TYTSLIDGLCK 616

Query: 144 HYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPN 201
             ++  A+ +  +M   G KL V  ++ ++     + +    + F   + E++  G+ PN
Sbjct: 617 SNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKF---FTELLDIGLTPN 673

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
               N ++      N +E+AL+  + M K     + + +  +I GL+   ++  ++ +  
Sbjct: 674 TVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYS 733

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           EM    I  ++  YT +I  L    +LE A ++ K M   ++ P  L Y  LI       
Sbjct: 734 EMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREG 793

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
            L +A  + ++M+  GL P D  +  +V G  +V
Sbjct: 794 NLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827



 Score = 38.9 bits (89), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 12/230 (5%)

Query: 18  VNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEA-KIQSLRHNLSPDHLIRVLDNTNDL 76
           +  TS I  L  +N I L+ E      H    Y+  K+  + ++   D   ++    +D+
Sbjct: 605 ITYTSLIDGLCKSNKIGLALEM-----HSDMKYKGMKLDVVAYSALIDGFCKM----HDM 655

Query: 77  SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS 136
            SA K F  + +          Y  MI       N+E    L Q M+K + P   +   S
Sbjct: 656 ESASKFFTEL-LDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS 714

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           ++   +   +++ A+ +   M S      + ++ V++  +    +   +   + KEM   
Sbjct: 715 IIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQ-LENASKILKEMDGN 773

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            I P+V   N L+   F    ++ A      M  KG  P+  T++I++ G
Sbjct: 774 NITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 264/582 (45%), Gaps = 24/582 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV- 194
           +L+      +R++ A ++ ++M   G +     +  ++  + +  +     + +++EM+ 
Sbjct: 50  TLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGK-INIALHLHQEMLN 108

Query: 195 ---KAGIV--PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
              + GI   P + + + +++ L +  R + A + F+ M  +G  P+  ++  +I G   
Sbjct: 109 DTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCR 168

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           + + + +  +  EM D+GI+ +++  + +I +LC+E K+ EA  L ++M     + D +T
Sbjct: 169 SGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVT 228

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-- 367
           Y  LI  LC   R+ +A  +   M  +G  P    +  +++GLC+ G  + ++   ++  
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288

Query: 368 --------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
                   KC      ++ +++  C   +   A+ + ++M  + I  D  S+   I   C
Sbjct: 289 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            + +  KA  L   M+   + PD  T S  +   CK     +A ++   V  +  + D +
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           + + LV+GLC   +I++A ++F  M K GC  +  +   L+ GLC    +  A+ L    
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468

Query: 539 YSSGTSYTTS------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            S  + Y  +      +Y+ I+ GL K  R  +   +  +M   G   DV +Y  LI   
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
               K KD    FN MV  G+ PD  T   L+  L    ++   +  +  ++    + ++
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             Y  L+ GL      S+A+ L   M   G +PD  T+G L+
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 630



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 244/545 (44%), Gaps = 70/545 (12%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G + ++ T + L++ L   +RI  A   F  M K GC P++  +  ++KGL     
Sbjct: 217 MIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGN 276

Query: 253 VDDSVSILGEMFD----LGIQLELSF--YTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           ++ ++ +  EM +     GI+ + +   Y+ II  LC++ + +EA  LFK M+A  +MPD
Sbjct: 277 INTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPD 336

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRGLCEVGKFDESVN 363
            ++Y  LI+  C + + + A  +  +M+ +G+ P   T  V +D+   LC+ GK  E+  
Sbjct: 337 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDM---LCKKGKVIEANK 393

Query: 364 FLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMAD----RKIADCDSWNIPIR 415
            LE        P       L++  C   +   A  +  KM        +  C +    ++
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL---MK 450

Query: 416 WLCENEEIRKAYELLGRMVVSS------VVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
            LC++  I+ A EL   M+  +        P+  +YS  + G CK    ++A  +F+++ 
Sbjct: 451 GLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMK 510

Query: 470 AQSLVLDSISYSKLVEG-----------------------------------LCQVEKIT 494
           A  ++ D ISY+ L+ G                                   LC+  K+ 
Sbjct: 511 ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVI 570

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA E+   M + GC  ++ ++  L+ GLC+  ++ +A +L       G      TY  +M
Sbjct: 571 EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 630

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCAL------DVEAYCILIQSMSEQNKLKDCALFFNVM 608
            GL +    K  L +  +ML +          DV +Y I+I  + +  +  +    F  M
Sbjct: 631 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 690

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G++P+  +  SL+HG     +L       N++V     L++  Y+++I+G  KEG  
Sbjct: 691 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750

Query: 669 SQASY 673
            +A +
Sbjct: 751 DKALF 755



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 239/532 (44%), Gaps = 37/532 (6%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  GI P+V T   L+++  +  ++  A +    M ++GC  +  T+  +IKGL    R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM------RALDLMPD 306
           + ++  +   M  LG + +   Y  ++  LC+  K+  A+ L + M        +   P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            ++Y  +I+ LC++ R D+A ++ ++M   G+ P    +  ++ G C  GK++++     
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 367 D------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCE 419
           +      +    TS  + L++  C  GK   A  +LE M  R  I D  +++  I+ LC 
Sbjct: 181 EMLDVGIRSDVTTS--SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS-- 477
              I +A  L   M      PD   Y   + G C+  N   AL++      Q ++ D+  
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH-----QEMLNDTGR 293

Query: 478 ---------ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                    ISYS +++GLC+  +  EA E+F  M   G      S+  LI+G C+  K 
Sbjct: 294 YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKW 353

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +KA  L +     G     +T + ++  L K  +  +   +L  ++  GC  DV     L
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           ++ +  ++++      F  M K G +P+  T  +L+ GL     + +       ++SD+ 
Sbjct: 414 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473

Query: 649 VL------DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                   ++  Y+I+I+GL K G   +A  L   M   G +PD  ++  L+
Sbjct: 474 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 178/356 (50%), Gaps = 42/356 (11%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM------HKKGCCPNSRTFEI 242
           ++ +M K G +PNV T   L++ L ++  I+ AL+  + M      +   C PN+ ++ I
Sbjct: 429 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 488

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GL    R D++  +  EM  LG+  ++  YT +I   CR  K ++A  LF  M  + 
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD  T+  LI+ LC+  ++ +AN++LE MI  G  P    +  +V+GLC   +  E  
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE-- 606

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                                  A + F+    ++K+    + D  ++   ++ LC+   
Sbjct: 607 -----------------------ATQLFMK---MQKLG--CLPDVVTYGTLMKGLCQTGN 638

Query: 423 IRKAYELLGRMVV------SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           I+ A EL  +M+       ++  PD  +YS  + G CK    ++A  +F+++ A  ++ +
Sbjct: 639 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            ISY+ L+ G C+  K+ +A  +F  M   G  L++ +++++I+G C   ++DKA+
Sbjct: 699 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 258/556 (46%), Gaps = 28/556 (5%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++ +      ++ AM VL  M   G   +   +N +L      ++      F+ K+M  
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL-KKMRS 294

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+V T N L++ L +  R   A   F  M K+G  P+  T+  +++G      + +
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             ++L  M   GI  +   +  +I    ++ K++EA+ +F  MR   L P+ +TY  +I 
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGY 371
            LC++  +DDA    E MI  GLTP   V+  ++  LC   K+D++    +  L+     
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
            T   N+++   C  G+   ++ + + M    +  +  +++  I   C   ++ +A +LL
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    + PDC TY+  + G C++   +DAL +F+++ +  +  + I+Y+ +++GL   
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +   A E++  ++K+G  L  S++NI+++GLC     D+A+R+      +     T T+
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 551 TKIMLGLVKLQR---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             ++  L+K+ R   AKDL V  +     G   +   Y ++ +++  Q  L++    F  
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSS---NGLVPNYWTYRLMAENIIGQGLLEELDQLFFS 711

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M   G   D   ML+ +               + +L+   E+  +  Y  +I+       
Sbjct: 712 MEDNGCTVD-SGMLNFI---------------VRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 668 TSQASYLLDLMLGKGW 683
            S AS  +DL+ G  +
Sbjct: 756 ASTASLFIDLLSGGKY 771



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 140/615 (22%), Positives = 255/615 (41%), Gaps = 47/615 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++     L N+   GF++    F  +L  +  +KR       V + M +   +P+V + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
             LL+ L + NR + AL+    M      G  P+  ++  VI G       D + S   E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D  I  ++  Y+ II  LC+   +++A+ +   M    +MP+ +TY  +++  C + +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA---- 378
             +A   L+ M   G+ P    +  ++  LC+ G+  E+    +        P  A    
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           LL+     G       +L+ M    I  D   +NI I    + E++ +A  +  +M    
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+  TY A +   CK  + +DA+  F Q+  + L  + I Y+ L+  LC  +K  +A 
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461

Query: 498 EVFCCMSKNGCSLSSSSFNILIY-----------------------------------GL 522
           E+   M   G  L++  FN +I+                                   G 
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C+  K+D+A +L S  +S G      TY  ++ G  ++ R  D L +  +M+  G + ++
Sbjct: 522 CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNI 581

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y I++Q +    +       +  + K+G   +  T   +LHGL   +           
Sbjct: 582 ITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL----VGSSV 698
           L      L++  +NI+I  L K G   +A  L       G VP+  T+ L+    +G  +
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701

Query: 699 GEEIDSRRFAFDSSS 713
            EE+D   F+ + + 
Sbjct: 702 LEELDQLFFSMEDNG 716



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 134/612 (21%), Positives = 266/612 (43%), Gaps = 45/612 (7%)

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           + ++ +   GG    V  +  V+    +E  G +D  +  Y EM+   I P+V T + ++
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKE--GDSDKAYSTYHEMLDRRISPDVVTYSSII 238

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +   ++ A++    M K G  PN  T+  ++ G  ++ +  +++  L +M   G++
Sbjct: 239 AALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVE 298

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLF-----------------------------KMMRA 300
            ++  Y  ++  LC+  +  EA ++F                             +M   
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL 358

Query: 301 LDLM------PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           LDLM      PD   +  LI    +  ++D+A  +   M   GL P    +  ++  LC+
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDS 409
            G  D+++ + E       +P    + +L+   C   K+  A+ ++ +M DR I  +   
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF 478

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I   C+   + ++ +L   MV   V P+  TYS  + G C     ++A ++   + 
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           +  +  D ++Y+ L+ G C+V ++ +A+ +F  M  +G S +  ++NI++ GL   R+  
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  L      SGT    STY  I+ GL K     + L +   + +    L+   + I+I
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            ++ +  +  +    F      GLVP+  T   +   +     L  +      +  +   
Sbjct: 659 GALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCT 718

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG-SSVGEEIDSRRFA 708
           +DS M N ++  L + G  ++A   L ++  K +  +A+T  L +   S G+  +  RF 
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHRFL 778

Query: 709 FDS-SSFPDSVS 719
            +   SF +S+S
Sbjct: 779 PEKYKSFIESLS 790



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/518 (22%), Positives = 230/518 (44%), Gaps = 40/518 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
           D   V+ E+++ G   ++  LN  L  +   +   +A+ ++ RM + G     P   T+ 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADV-ARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
           I+I       R+D   + LG +   G ++E   +T ++  LC + +  +A+ +  + M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMI---VIGLTPTDDVFVDIVRGLCEVGK 357
           L  MPD  +   L+  LC+  R  +A ++L  M      G  P    +  ++ G  + G 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRW 416
            D+                               A     +M DR+I+ D  +++  I  
Sbjct: 212 SDK-------------------------------AYSTYHEMLDRRISPDVVTYSSIIAA 240

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+ + + KA E+L  MV + V+P+C TY++ + G C     ++A+   +++ +  +  D
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++Y+ L++ LC+  + TEA ++F  M+K G     +++  L+ G      + +   L  
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           L   +G       +  ++    K ++  + ++V ++M   G   +V  Y  +I  + +  
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            + D  L+F  M+  GL P+     SL+H L    +       I +++     L++  +N
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I+   KEG   ++  L DLM+  G  P+  T+  L+
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/409 (22%), Positives = 194/409 (47%), Gaps = 10/409 (2%)

Query: 132 EALISLVFSFVNHYRVNGA---MRVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           E  I+   + +  Y   GA   M  L++ M   G      VFN+++ A  ++++   + +
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK-VDEAM 391

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            V+ +M + G+ PNV T   ++ +L ++  ++ A+  F +M  +G  PN   +  +I  L
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               + D +  ++ EM D GI L   F+  II   C+E ++ E+ +LF +M  + + P+ 
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  LI+  C   ++D+A  +L  M  +G+ P    +  ++ G C V + D+++   ++
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
                 SP    +N +L+   +  +   AK +   +       +  ++NI +  LC+N  
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
             +A  +   + ++ +  +  T++  +    K+   ++A  +F   S+  LV +  +Y  
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
           + E +     + E  ++F  M  NGC++ S   N ++  L    ++ +A
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 81/383 (21%), Positives = 162/383 (42%), Gaps = 11/383 (2%)

Query: 324 DDANDILEDMIVIGLTPT----DDVFVDIVRG--LCEVGKFDESVNFLEDKCGYVTSPHN 377
           +DA  + ++++  G   +    +    D+ R      V +++        K       + 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL-LGRMVV 435
            L+ CCC AG+  L    L  +  +    +  ++   ++ LC ++    A ++ L RM  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS---AQSLVLDSISYSKLVEGLCQVEK 492
            S +PD  + +  + G C     ++AL +   ++         D +SY+ ++ G  +   
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
             +A   +  M     S    +++ +I  LC  + +DKA+ + +    +G      TY  
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           I+ G    ++ K+ +  L +M  +G   DV  Y  L+  + +  +  +    F+ M K G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L PD  T  +LL G A    L  + + ++ +V +    D  ++NILI    K+    +A 
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 673 YLLDLMLGKGWVPDATTHGLLVG 695
            +   M   G  P+  T+G ++G
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIG 414


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 245/532 (46%), Gaps = 18/532 (3%)

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF--ETNRIESALDQFRRM-HK 230
            ++ EEK   A+ + V+   ++ G  P  D+L Y L V    +T  +  A    R M  K
Sbjct: 241 ASLREEKP--AEALEVFSRAIERGAEP--DSLLYSLAVQACCKTLNLAMANSLLREMKEK 296

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           K C P+  T+  VI   +    ++D++    EM   GI + +   T +I   C+ N L  
Sbjct: 297 KLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGS 356

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+ LF  M      P+ +T+  LI    +N  ++ A +  + M  +GLTP+      I++
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPH-----NALLECCCNAGKFFLAKCILEKMADRKIA 405
           G  +  K +E++   ++   + T        N +L   C  GK   A  +L KM  R I 
Sbjct: 417 GWLKGQKHEEALKLFDE--SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIG 474

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  S+N  +   C  + +  A  +   M+   + P+  TYS  + G  K  + ++ L V
Sbjct: 475 PNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEV 534

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM--SKNGCSLSSSSFNILIYGL 522
             Q+++ ++ ++ + Y  ++ GLC+V + ++A E+   M   K  C +S  S+N +I G 
Sbjct: 535 VNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFC-VSCMSYNSIIDGF 593

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               ++D A+       ++G S    TYT +M GL K  R    L +  +M  +G  LD+
Sbjct: 594 IKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDI 653

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            AY  LI    +++ ++  +  F+ +++ GL P +    SL+ G  +   +        K
Sbjct: 654 PAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKK 713

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++ D    D   Y  LI+GL KEG    AS L   M   G VPD   + ++V
Sbjct: 714 MLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIV 765



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 254/575 (44%), Gaps = 41/575 (7%)

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV-DVFNVVLGAIVEEKRGFADFVFV 189
           +E   S++ + V    +  A+R    M S G  ++V    +++ G       G A  +F 
Sbjct: 303 QETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF- 361

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           YK M   G  PN  T + L+E   +   +E AL+ +++M   G  P+      +I+G + 
Sbjct: 362 YK-MENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
             + ++++ +  E F+ G+    + + C  I+  LC++ K+++A  L + M +  + P+ 
Sbjct: 421 GQKHEEALKLFDESFETGLA---NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNV 477

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           ++Y  ++   C    +D A  +  +M+  GL P +  +  ++ G     K  +  N LE 
Sbjct: 478 VSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCF---KNHDEQNVLE- 533

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
                                      ++ +M    I  +   +   I  LC+  +  KA
Sbjct: 534 ---------------------------VVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKA 566

Query: 427 YELLGRMVVSS-VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            ELL  M+        C +Y++ + G  K    + A+  + ++ A  +  + I+Y+ L++
Sbjct: 567 RELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMD 626

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC+  ++ +A+E+   M   G  L   ++  LI+G C    ++ A  L S     G + 
Sbjct: 627 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNP 686

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           +   Y  ++ G   L      L +  +ML +G   D+  Y  LI  + ++  L   +  +
Sbjct: 687 SQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLY 746

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M   GLVPD      +++GL+   Q   V     ++  ++   +  +YN +I G ++E
Sbjct: 747 TEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 806

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           G   +A  L D ML KG +PD  T  +LV   VG+
Sbjct: 807 GNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGK 841



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 108/544 (19%), Positives = 210/544 (38%), Gaps = 85/544 (15%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADF-VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           GF+++   FN +L A  ++++   D+ V +  +M++ G++P V  +N  L  L + N I 
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQ--TDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSIT 214

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A + + RM   G   ++ T +++++  +                               
Sbjct: 215 EAKELYSRMVAIGVDGDNGTTQLLMRASL------------------------------- 243

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL- 338
               RE K  EA+ +F         PD L Y   +   C+ L L  AN +L +M    L 
Sbjct: 244 ----REEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLC 299

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
            P+ + +  ++    + G  ++++                                   +
Sbjct: 300 VPSQETYTSVILASVKQGNMEDAI-----------------------------------R 324

Query: 399 MADRKIADCDSWNIP-----IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
             D  ++D  S N+      I   C+N ++  A +L  +M      P+  T+S  +    
Sbjct: 325 WKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFS 384

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    E AL  ++++ +  L         +++G  + +K  EA+++F    + G    ++
Sbjct: 385 KNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL---AN 441

Query: 514 SF--NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            F  N ++  LC   K+DKA  L     S G      +Y  +ML   + +       V +
Sbjct: 442 VFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFS 501

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            ML +G   +   Y ILI    + +  ++     N M  + +  +     ++++GL    
Sbjct: 502 NMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVG 561

Query: 632 QLHLVSSGINKLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           Q       +  ++ +     S M YN +I+G  KEG    A    + M   G  P+  T+
Sbjct: 562 QTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITY 621

Query: 691 GLLV 694
             L+
Sbjct: 622 TSLM 625


>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 221/480 (46%), Gaps = 22/480 (4%)

Query: 20  LTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSA 79
            ++ IS+   ANT    S        Q+   +  I+   H L+P  L  ++   +D   +
Sbjct: 12  FSTAISAAIVANTTTTPSLP------QSYKIQPPIKPWPHRLNPKLLSSLISRQHDPHFS 65

Query: 80  LKIFKWVSIQKR--FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNV--REALI 135
           L+IF       +  F H   TY  + LKL       E+E L   + +   P+    E ++
Sbjct: 66  LQIFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSEIESLLAGL-RSSPPHCCGEEPIV 124

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++  +    +   A++  + + S G + SV   N +L ++V+ KR    F+       +
Sbjct: 125 TVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGER 184

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             ++PNV + N LL+ L + N +E A+     M   G  PN  ++  V+ G +    +D 
Sbjct: 185 FRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDG 244

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +  E+ D G   +++ YT ++   CR  KL +AIR+  +M    + P+E+TY  +I 
Sbjct: 245 AMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQ 304

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCG- 370
             C+  +  +A +++EDMI   L    ++   +V  LCE G  +++           CG 
Sbjct: 305 AYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGL 364

Query: 371 ---YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
               V S    L+   C  GK   A+ + ++     +A   ++N  I  LCE  E+ +A 
Sbjct: 365 NGAVVVS---TLIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAA 421

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L   MV   V P+  TY+  + G CK+ N ++ +RV  ++     + +  +Y+ L++G+
Sbjct: 422 RLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGI 481



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 166/379 (43%), Gaps = 43/379 (11%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL---GEMFDLGIQLELSFYTC 277
           AL  F R+   G  P+ R+   ++  L+ N R   +  +    GE F    ++  +  +C
Sbjct: 139 ALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERF----RVLPNVVSC 194

Query: 278 --IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             ++  LC+ N++E A+++   M  + L+P+ ++Y  ++        +D A  +  +++ 
Sbjct: 195 NILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLD 254

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            G +P    +  +V G C +GK  +++                                +
Sbjct: 255 RGWSPDVTSYTVLVDGFCRLGKLVDAIR-------------------------------V 283

Query: 396 LEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           ++ M D  +   + ++ + I+  C+ ++  +A  L+  M+   +V         V   C+
Sbjct: 284 MDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCE 343

Query: 455 LCNYEDALRVFRQVSAQSLVLD-SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
             N E A  ++R VS ++  L+ ++  S L+  LC+  K+ EA  VF    K G   S  
Sbjct: 344 EGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGK-GSVASLL 402

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI GLC   ++ +A RL       G +    TY  ++ G  K+  AK+ + VL +M
Sbjct: 403 TYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEM 462

Query: 574 LVEGCALDVEAYCILIQSM 592
           L   C  +   Y ILI  +
Sbjct: 463 LENRCLPNKSTYTILIDGI 481



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 161/360 (44%), Gaps = 8/360 (2%)

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILE 397
           ++  V ++RG    GK   ++        +   P     NALL       ++ LA  + +
Sbjct: 120 EEPIVTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFK 179

Query: 398 KMADR--KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
              +R   + +  S NI ++ LC+  E+  A ++L  M    +VP+  +Y+  + G    
Sbjct: 180 NCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWR 239

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            + + A++VFR+V  +    D  SY+ LV+G C++ K+ +A+ V   M  NG   +  ++
Sbjct: 240 GDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTY 299

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            ++I   C  +K  +A+ L     +      +    K++  L +    +    +   +  
Sbjct: 300 GVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSR 359

Query: 576 EGCALD-VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           + C L+       LI  + ++ K+ +    F+   K G V    T  +L+ GL +G +L 
Sbjct: 360 KNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELC 418

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +   + +V      ++  YN+LI G  K G   +   +L+ ML    +P+ +T+ +L+
Sbjct: 419 EAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILI 478


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 224/496 (45%), Gaps = 9/496 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM   G+VP+  TLN +L+V      +E A + F  M ++G  P+  +F++++       
Sbjct: 179 EMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMG 238

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           RV ++   L  M + G  ++ +  T II   C++  +   +  F  M  + L P+ + + 
Sbjct: 239 RVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---LEDK 368
            LIN LC+   +  A ++LE+M+  G  P       ++ GLC+ G  +++      L   
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRS 358

Query: 369 CGYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
            GY  + H   A++   C   K   A+ +L +M ++  + + +++   I   C+     +
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVR 418

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AYEL+  M      P+  TY+A + G CK  + ++A R+  +VS   L  D ++Y+ L+ 
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+      ++  F  M K G +    S+  LI   C  +++ ++ RL   A S G   
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIP 538

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TYT ++ G  +       + +  +M   GCA D   Y  LI  + +++KL D    +
Sbjct: 539 TKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLY 598

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + M+  GL P   T L+L +           S+ IN L    +       N L+  L  E
Sbjct: 599 DAMMDKGLSPCEVTRLTLAYEYCKKDD---SSTAINVLDRLEKRQWIRTVNTLVRKLCSE 655

Query: 666 GLTSQASYLLDLMLGK 681
           G    A+     +L K
Sbjct: 656 GKLDMAALFFHKLLDK 671



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 141/623 (22%), Positives = 264/623 (42%), Gaps = 65/623 (10%)

Query: 60  NLSPDHLIRVLDNTNDLSS---ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           +L+ D  I V+ +  D +    AL    W     +F+H    Y  ++    L GN     
Sbjct: 95  SLTHDQAITVVASLADEAGSMVALSFLYWAIGFPKFRHFMRLY--IVSATALIGN----- 147

Query: 117 GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
              +N+  ER     E +  +V +F  + ++  A+ ++V M + G   S    N VL   
Sbjct: 148 ---KNL--ER---ANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVA 199

Query: 177 VEE--------------KRGFADFVFVYK--------------------EMVKAGIVPNV 202
           V                +RG +     +K                     MV+ G + + 
Sbjct: 200 VGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDN 259

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T   +++   +   +   +  F +M + G  PN   F  +I GL     +  +  +L E
Sbjct: 260 ATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEE 319

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENL 321
           M   G +  +  +T +I  LC++   E+A RLF K++R+    P+  TY  +IN  C+  
Sbjct: 320 MVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP---- 375
           +L+ A  +L  M   GL P  + +  ++ G C+VG F  +   ++   K G+  SP    
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF--SPNIYT 437

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +NA+++  C  G    A  +L K++   + AD  ++ I +   C   +  ++     +M+
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                PD  +Y+  +   C+    +++ R+F +  +  L+    +Y+ ++ G C+    +
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            AV++F  MS +GC+  S ++  LI GLC   K+D A  L       G S    T   + 
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
               K   +   + VL ++        V     L++ +  + KL   ALFF+ ++     
Sbjct: 618 YEYCKKDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAALFFHKLLDKEPN 674

Query: 615 PDRETMLSLLHGLADGSQLHLVS 637
            +R T+L  ++   + ++  LVS
Sbjct: 675 VNRVTLLGFMNKCYESNKYGLVS 697



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 192/444 (43%), Gaps = 11/444 (2%)

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C++       KL+EA+ +   M+   L+P   T   +++       ++ A ++  +M   
Sbjct: 159 CMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQR 218

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHNA----LLECCCNAGKFF 390
           G++P    F  +V   C +G+  E+  +L    + G++    NA    +++  C  G   
Sbjct: 219 GVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVD--NATCTLIIDAFCQKGYVN 276

Query: 391 LAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
                  KM +  +A +  ++   I  LC+   I++A+ELL  MV     P+  T++  +
Sbjct: 277 RVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLI 336

Query: 450 LGKCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
            G CK    E A R+F + V +     +  +Y+ ++ G C+ +K+  A  +   M + G 
Sbjct: 337 DGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL 396

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +++++  LI G C +    +A  L  L    G S    TY  I+ GL K     +   
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR 456

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L ++ V G   D   Y IL+     Q       +FFN M+K G  PD  +  +L+    
Sbjct: 457 LLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFC 516

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              Q+        + VS   +     Y  +I G  + G TS A  L   M   G  PD+ 
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 689 THGLLVGSSVGE-EIDSRRFAFDS 711
           T+G L+     E ++D  R  +D+
Sbjct: 577 TYGALISGLCKESKLDDARNLYDA 600


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 151/648 (23%), Positives = 268/648 (41%), Gaps = 69/648 (10%)

Query: 63  PDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           P  LIRVL +  +  + AL+ FK V  Q  F+ +   +C +            ++ L  N
Sbjct: 105 PQLLIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAI------------LQILVDN 152

Query: 122 MVKERYPNVREALIS-----LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
            + +    V E +IS     +V   +  Y     + V   M    F   V   N +L  I
Sbjct: 153 CLMKSAYWVMERIISFEMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRIL-KI 211

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
           + +K      + VY+ M + GI P V T N +L    +   ++ ALD   +M ++GC P+
Sbjct: 212 LRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPS 271

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
             TF ++I GL     +  +  ++ EM   G+++    Y  +I   C++  L EA+ L++
Sbjct: 272 EVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWE 331

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M    + P   ++  ++   C+  ++ DA   L DM+   L P    +  ++ G C +G
Sbjct: 332 EMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLG 391

Query: 357 KFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
              E+   L++       +    +N L++  C  G    A  + E M +R I  D  ++ 
Sbjct: 392 NIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYT 451

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           + +   C+   +  A E    M+   + PD   Y+A ++G+ KL +   A ++  ++  +
Sbjct: 452 VLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTK 511

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
               D I+Y+  V GLC++  + EA E+   M ++G      ++   ++       + + 
Sbjct: 512 GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREG 571

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             +     S G + T  TYT ++       R    +    +M  +G   +V  Y +LI  
Sbjct: 572 REIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLING 631

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             +  K+     FF  M + G+ P++ T                                
Sbjct: 632 FCKVRKMDQACKFFIEMQEKGIFPNKYT-------------------------------- 659

Query: 652 SSMYNILIN-----GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              Y ILIN     G W+E L   A      MLGK   PD+ THG L+
Sbjct: 660 ---YTILINENCNMGKWQEALRLYAQ-----MLGKRIRPDSCTHGALL 699



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 220/523 (42%), Gaps = 42/523 (8%)

Query: 182 GFADF--VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           G+ ++  + V+++M++   +P+V   N +L++L + N +  AL+ +R M + G  P   T
Sbjct: 180 GYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTT 239

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
                                              Y  ++   C+  +++ A+ L   M+
Sbjct: 240 -----------------------------------YNTMLHSFCKGGEVQRALDLVPKMQ 264

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                P E+T+  LIN L +   L  A  ++++M   GL  +   +  ++ G C+ G   
Sbjct: 265 ERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLV 324

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E++   E+      SP    HN ++   C  GK   A+  L  M  + +  D  S+N  I
Sbjct: 325 EALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLI 384

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C    I +A+ LL  +   ++  +  TY+  + G C+L + E AL++   +  + + 
Sbjct: 385 YGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIH 444

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            D ++Y+ LV G C++  +  A E F  M   G +    ++   I G   +    KA +L
Sbjct: 445 PDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKL 504

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           +    + G      TY   + GL KL   ++   +L +M+ +G   D   Y   + +  E
Sbjct: 505 QEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHME 564

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
              L++    F  M+  G  P   T   L+H  A   +L    +   ++     V +   
Sbjct: 565 NGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVIT 624

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
           YN+LING  K     QA      M  KG  P+  T+ +L+  +
Sbjct: 625 YNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINEN 667


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/564 (20%), Positives = 257/564 (45%), Gaps = 7/564 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F+    +  A R+   M + G + ++ ++N +L  + +  +     + + +EM++
Sbjct: 316 ALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK-MEKALEIMQEMME 374

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P+  T + L+E       +  A +    M K+   P   T+ ++I GL     +  
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + +IL EM   G++     YT ++    +E ++EE+  + + MR   ++PD   Y  LI 
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT 373
             C+  R+++A   L +M+   L P    +   + G  + G+ + +  +  +   CG + 
Sbjct: 495 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 554

Query: 374 SP--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
           +   + AL+E  C  G    A  +   +  R++  D  ++++ I  L  N ++ +A+ + 
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             +    ++P+  TY++ + G CK  N + A ++  ++  + +  D ++Y+ L++GLC+ 
Sbjct: 615 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 674

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +I  A  +F  +   G + +  ++  ++ G C  +    A +L       G       Y
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+    K ++ +  L +  +ML +G A  V ++  LI+   +  KL++       M++
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIE 793

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
              +P+  T  SL+        +        ++   + +  +  Y  L++G    G  S+
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
            S L + M+ KG  PD  T+ +++
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMI 877



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 245/549 (44%), Gaps = 41/549 (7%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +++++     EKR   +   +  EM+  G+ P   T N L++       IE A      
Sbjct: 278 TYDILINGFCMEKRS-REAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 336

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M   G   N   +  ++ G+    +++ ++ I+ EM + G++ +   Y+ +I   CR   
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQN 396

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +  A  L   M+   L P  LTY  +IN LC    L   N IL +M++ GL P   V+  
Sbjct: 397 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 456

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++    + G+ +ES   LE        P    +N+L+   C A +   A+  L +M +R+
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  +  ++   I    +  E+  A      M+   V+P+   Y+A + G CK  N  +A 
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            VFR + ++ ++ D  +YS L+ GL +  K+ EA  +F  + + G   ++ ++N LI G 
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLL-VVLAQMLVEGC 578
           C    VDKA +L       G +    TY  ++ GL K   ++RAK+L   +  + L   C
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 696

Query: 579 ---ALDVEAYC---------ILIQSMSEQNKLKDCALFFNVMVKAGLVPDR-ETMLSLLH 625
              A  V+ YC          L++ M  +    D A  +NV++      ++ E  L L  
Sbjct: 697 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD-AFIYNVILNFCCKEEKFEKALDLFQ 755

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                    ++  G    VS         +N LI G  K G   +A++LL+ M+ K ++P
Sbjct: 756 --------EMLEKGFASTVS---------FNTLIEGYCKSGKLQEANHLLEEMIEKQFIP 798

Query: 686 DATTHGLLV 694
           +  T+  L+
Sbjct: 799 NHVTYTSLI 807



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 226/535 (42%), Gaps = 58/535 (10%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P++ + N LL  L + N++E     F  M      P+  T+  +I        V D+  +
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM +                  +   L+EAI L + M    L+PD  TY+ LIN  C 
Sbjct: 247 LLEMGE------------------KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 288

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--P 375
             R  +A  +L +MI +GL P    +  ++ G    G  +++    ++   CG   +   
Sbjct: 289 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 348

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            N LL   C AGK   A  I+++M ++ +  D  ++++ I   C  + + +A+ELL  M 
Sbjct: 349 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 408

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              + P   TYS  + G C+  N +    + R++    L  +++ Y+ L+    +  ++ 
Sbjct: 409 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 468

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI---------RLRSLAYSSGT-- 543
           E+  +   M + G       +N LI G C  +++++A          RLR  A++ G   
Sbjct: 469 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 528

Query: 544 -SYTTS-----------------------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             Y+ +                        YT ++ G  K     +   V   +L     
Sbjct: 529 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 588

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            DV+ Y +LI  +S   K+ +    F+ + + GL+P+  T  SL+ G      +   S  
Sbjct: 589 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 648

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + ++       D   YNILI+GL K G   +A  L D + G+G  P+  T+  +V
Sbjct: 649 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 128/607 (21%), Positives = 251/607 (41%), Gaps = 63/607 (10%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVN 148
           +++   T  TY  +I  L   GN++    + + MV            +L+ +     RV 
Sbjct: 409 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 468

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            +  +L  M   G    V  +N ++    + KR      ++  EM++  + PN  T    
Sbjct: 469 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM-EMLERRLRPNAHTYGAF 527

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++   +   +E A   F  M   G  PN   +  +I+G      V ++ S+   +    +
Sbjct: 528 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 587

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             ++  Y+ +I  L R  K+ EA  +F  ++   L+P+  TY  LI+  C+   +D A+ 
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
           +LE+M + G+ P    +  ++ GLC+ G+ + + N  +D  G   +P             
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP------------- 694

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
                            +C ++   +   C+++    A++LL  M++  V PD   Y+  
Sbjct: 695 -----------------NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   CK   +E AL +F+++  +     ++S++ L+EG C+  K+ EA  +   M +   
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 796

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +  ++  LI   C    + +A RL           T  TYT ++ G   +    ++  
Sbjct: 797 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 856

Query: 569 VLAQMLVEGCALDVEAYCILIQSM-SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           +  +M+ +G   D   Y ++I +   E N ++ C L   ++VK   +P           +
Sbjct: 857 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG--MP-----------M 903

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
             G +L L +                  +++  G    G   +A+ +L  M+  GWV + 
Sbjct: 904 KSGFRLGLPTC-----------------SVIARGFQIAGNMDEAAEVLRSMVKFGWVSNT 946

Query: 688 TTHGLLV 694
           T+ G LV
Sbjct: 947 TSLGDLV 953



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 115/274 (41%), Gaps = 18/274 (6%)

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           +++   M    V+PD  TY+  +   CK+ N +DA RV  ++  ++ +LD          
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLD---------- 258

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
                   EA+E+   M   G      +++ILI G C+ ++  +A  +       G    
Sbjct: 259 --------EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 310

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ G ++    +    +  +M+  G   ++  +  L+  + +  K++       
Sbjct: 311 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 370

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M++ G+ PD +T   L+ G   G  +      ++++           Y+++INGL + G
Sbjct: 371 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 430

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
                + +L  M+  G  P+A  +  L+ +   E
Sbjct: 431 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKE 464


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 221/460 (48%), Gaps = 6/460 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  F  +LG++V+ K  F   + + K+M   GI P++ TL+ L+       ++  +   
Sbjct: 131 SIIEFGKILGSLVKMKH-FPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             ++ K G  PN+     ++KGL     V  S+    ++   G Q+    Y  ++  LC+
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +   AI+L +M+      PD + Y  +I+ LC++  +++A D   +M   G+ P    
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           +  ++ G C  G+   + + L +      +P    +  L++  C  GK   AK +L  M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
              +  +  +++  +   C   E+  A ++   MV + V P   +Y+  + G CK  + +
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+ + R++  +++V ++++Y+ L++GLC+  +IT A+++   +   G      ++  L+
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            GLC  + +DKAI L       G      TYT ++ GL K  R K+   +   +LV+GC 
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           +DV  Y ++I  + ++  L +     + M   G +PD  T
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVT 589



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 208/485 (42%), Gaps = 42/485 (8%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V D+VS    M  +     +  +  I+  L +      AI L K M    + PD +T   
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--- 369
           LINC C   ++  +  +L  ++ +G  P   +   +++GLC  G+  +S++F  DK    
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHF-HDKVVAQ 231

Query: 370 GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           G+  +   +  LL   C  G+   A  +L  + DR    D   +N  I  LC+++ + +A
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           Y+    M    + PD  TYS  + G C       A  +  +++ +++  D  +Y+ L++ 
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351

Query: 487 LCQVEKITEAVEVFCCMSKNGC-----------------------------------SLS 511
           LC+  K+ EA  +   M+K G                                    + S
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             S+NI+I GLC  + VD+A+ L            T TY  ++ GL K  R    L ++ 
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMK 471

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           ++   G   DV  Y  L+  + +   L      F  M + G+ P++ T  +L+ GL  G+
Sbjct: 472 ELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGA 531

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +L         ++     +D   YN++I GL KEG+  +A  +   M   G +PDA T  
Sbjct: 532 RLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFE 591

Query: 692 LLVGS 696
           +++ S
Sbjct: 592 IIIRS 596



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 125/289 (43%), Gaps = 2/289 (0%)

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           ++ +  A      M++    P    +   +    K+ ++  A+ + +Q+  + +  D ++
Sbjct: 110 HDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVT 169

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            S L+   C + ++  +  V   + K G   ++     L+ GLC+  +V K++       
Sbjct: 170 LSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVV 229

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + G      +Y  ++ GL K+   +  + +L  +       DV  Y  +I  + +   + 
Sbjct: 230 AQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVN 289

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +   F+  M   G+ PD  T  +L+ G     QL    S +N++   +   D   Y ILI
Sbjct: 290 EAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILI 349

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS--VGEEIDSRR 706
           + L KEG   +A  LL +M  +G  P+  T+  L+     VGE  ++++
Sbjct: 350 DALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQ 398



 Score = 42.7 bits (99), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 5/175 (2%)

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           + KI+  LVK++     + +  QM V+G   D+    ILI       ++         ++
Sbjct: 135 FGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKIL 194

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G  P+   + +L+ GL    ++       +K+V+    ++   Y  L+NGL K G T 
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 254

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSS-----FPDSVS 719
            A  LL ++  +   PD   +  ++     +++ +  + F +       FPD ++
Sbjct: 255 CAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 218/485 (44%), Gaps = 6/485 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   + + + + G +P+V + N +L  L +  +++ AL  F  M KK   PN  T+ I
Sbjct: 332 FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNI 390

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I  L    RV+++  I  EM   G+   L     ++  LC+ N+LEEA R+F+      
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ +TY  LI+ L +  ++DDA  + E M+  G      ++  ++R     G+ ++  
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510

Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
              ++       P     N  ++C   AG+    + I E M     + D  S++I I  L
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  + R+   +   M       D   Y+A V G CK    + A  V  ++  + +    
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y  +V+GL +++++ EA  +F      G  L+   ++ LI G   + ++D+A  +   
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G +    T+  +M  LVK +   + L+    M    C+ +   Y ILI  +    K
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
                +F+  M K GL+P+  T  +++ GLA    +    S   +  ++  + DS+ +N 
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810

Query: 658 LINGL 662
           LI G+
Sbjct: 811 LIEGM 815



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 143/612 (23%), Positives = 258/612 (42%), Gaps = 79/612 (12%)

Query: 59  HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           H L PD      ++ VL     L  A ++F  +  ++     A  Y  MI+  G A   +
Sbjct: 275 HGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVP-CAYAYNTMIMGYGSAERFD 333

Query: 114 EMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           +   L + + +ER   P+V  +  S++       +V+ A+ +   M     K ++  +N+
Sbjct: 334 DAYKLLERL-RERGCIPSVV-SFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNI 390

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           ++  +    R   +   +  EM  AG+ PN+ ++N +++ L + N++E A   F    ++
Sbjct: 391 IIDMLCMAGR-VNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           GC PNS T+  +I GL    ++DD+  +  +M D G       YT +I       + E+ 
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
            +++K M      PD       ++C+ +   ++    I EDM   G  P    +  ++ G
Sbjct: 510 HKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHG 569

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSW 410
           L + G+  E+ N                               I + M+ +  A D  ++
Sbjct: 570 LTKAGQARETSN-------------------------------IFQAMSQQGFALDARAY 598

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  +  LC++ ++ KAYE+L  M V  V P  ATY + V G  K+   ++A  +F +  +
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658

Query: 471 QSLVLDSISYSKLVEG-----------------------------------LCQVEKITE 495
           + + L+ I YS L++G                                   L + E+I E
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+  F  M +  CS ++ +++ILI GLC ++K +KA          G      TYT ++ 
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMIS 778

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL K+    D   +  +    G   D  ++  LI+ MS  N+  +    F      G   
Sbjct: 779 GLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRL 838

Query: 616 DRETMLSLLHGL 627
           + +T +SLL  L
Sbjct: 839 NVKTCISLLDAL 850



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 233/540 (43%), Gaps = 17/540 (3%)

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI-VPNVDTLNYLLEVLFETNRIESAL 222
           L  D +N VL  +  +    A    V +EM   G  +PN      L+  L  + R+E A 
Sbjct: 106 LPPDAYNAVLPFLSHD---LAALEKVLEEMSHLGYGLPN-PACAALVATLVRSRRLEDAF 161

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
                M      P    + ++I  L    + + ++ +L +M D+G ++ +  +T ++  L
Sbjct: 162 RVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRAL 221

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            RE ++E A+ L   ++   L PD + Y   I+C  +   +D A     ++   GL P D
Sbjct: 222 AREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD 281

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED-------KCGYVTSPHNALLECCCNAGKFFLAKCI 395
             +  +V  LC+ G+  E+              C Y    +N ++    +A +F  A  +
Sbjct: 282 VSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYA---YNTMIMGYGSAERFDDAYKL 338

Query: 396 LEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           LE++ +R  I    S+N  +  L +  ++ +A  L   M      P+ +TY+  +   C 
Sbjct: 339 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCM 397

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                +A ++  ++    L  + +S + +V+ LC+  ++ EA  +F   S+ GC+ +S +
Sbjct: 398 AGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVT 457

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI GL    K+D A RL      +G       YT ++       R +D   +  +M+
Sbjct: 458 YCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMI 517

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D+      +  + +  +++     F  M   G +PD  +   L+HGL    Q  
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             S+    +      LD+  YN +++GL K G   +A  +L+ M  K   P   T+G +V
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 135/614 (21%), Positives = 251/614 (40%), Gaps = 42/614 (6%)

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           V  F++H  +    +VL  M+  G+ L       ++  +V  +R   D   V   M    
Sbjct: 114 VLPFLSH-DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRR-LEDAFRVIGAMRHLK 171

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
             P       L+  L E  + E AL+  R+M   G   +   F  +++ L    +++ ++
Sbjct: 172 FRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPAL 231

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
           +++ E+    ++ ++  Y   I    +   ++ A + F  ++A  L PD+++Y  ++  L
Sbjct: 232 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVL 291

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVT 373
           C+  RL +A ++   M      P    +  ++ G     +FD++   LE      C    
Sbjct: 292 CKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSV 351

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
              N++L C     K   A  + + M      +  ++NI I  LC    + +AY++   M
Sbjct: 352 VSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEM 411

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
            ++ + P+  + +  V   CK    E+A R+F   S +    +S++Y  L++GL +  KI
Sbjct: 412 ELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKI 471

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILI---------------------------------Y 520
            +A  +F  M   G   +   +  LI                                 Y
Sbjct: 472 DDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTY 531

Query: 521 GLCVMR--KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
             CV +  +V+K   +     S G      +Y+ ++ GL K  +A++   +   M  +G 
Sbjct: 532 MDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGF 591

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
           ALD  AY  ++  + +  K+         M    + P   T  S++ GLA   +L     
Sbjct: 592 ALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYM 651

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
              +  S    L+  +Y+ LI+G  K G   +A  +L+ M+ KG  P+  T   L+ + V
Sbjct: 652 LFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALV 711

Query: 699 G-EEIDSRRFAFDS 711
             EEID     F S
Sbjct: 712 KTEEIDEALICFQS 725


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 250/561 (44%), Gaps = 35/561 (6%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SLV  F +    + A+ V+  M + G + +V  +  ++G   + K G  +   +Y+ MV+
Sbjct: 227 SLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGK-GMDEAFSLYEGMVR 285

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G++P+V TL+ L++ L    +   A   FR M K G  PN  T+  +I  L    R  +
Sbjct: 286 SGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSE 345

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           S+ +LGEM   G+ ++L  YT ++  L +E K+EEA  + +  ++ ++ P+ +TY  L++
Sbjct: 346 SLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVD 405

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C    +D A  +L  M    + P    F  I+ GL + G   ++ ++           
Sbjct: 406 AHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADY----------- 454

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                               + KM D  IA +  ++   I    + +    A ++   M+
Sbjct: 455 --------------------MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              V  +     + V G  K  N E A  +F+ +  + L+LD ++Y+ L++GL +   + 
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A +V   + +   S  +  +N+ I  LC + K  +A        ++G     +TY  ++
Sbjct: 555 AAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 614

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
               +  +    L +L +M       ++  Y  L+  + E   +K      N M  AG  
Sbjct: 615 AARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFA 674

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASY 673
           P   T   +L   + GS+   V   I++L+  + +  D ++YN L++ L   G+   A+ 
Sbjct: 675 PTSLTHQRVLQACS-GSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATV 733

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           +LD ML +G  PD  T   L+
Sbjct: 734 VLDEMLTRGIAPDTITFNALI 754



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 135/575 (23%), Positives = 249/575 (43%), Gaps = 61/575 (10%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYR---VNGAMRVLV 155
           Y  ++ +LG  G +EE + + ++   +   N+    ++       H R   ++GA +VL+
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSD---NITPNFVTYTVLVDAHCRAGNIDGAEQVLL 421

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRG----FADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            M       +V  F+ ++  +V  KRG     AD++   ++M  +GI PNV T   L++ 
Sbjct: 422 QMEEKSVIPNVVTFSSIINGLV--KRGCLGKAADYM---RKMKDSGIAPNVVTYGTLIDG 476

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
            F+    E+ALD +R M  +G   N+   + ++ GL  N  ++ + ++  +M + G+ L+
Sbjct: 477 FFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLD 536

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
              YT ++  L +   +  A ++ + +   +L PD + Y   INCLC   +  +A   L+
Sbjct: 537 HVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLK 596

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
           +M   GL P    +  ++   C  GK  +++  L++       P    +  L+     AG
Sbjct: 597 EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAG 656

Query: 388 KFFLAKCILEKMADRKIA------------------------------------DCDSWN 411
               AK +L +MA    A                                    D   +N
Sbjct: 657 VVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYN 716

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             +  LC +   R A  +L  M+   + PD  T++A +LG CK  + ++A  ++ Q+  Q
Sbjct: 717 TLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            L  +  +++ L+ GL    +I EA  V   M K G   ++ +++IL+ G        +A
Sbjct: 777 GLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEA 836

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +RL     S G     STY  +M    K   + +AK+L    ++M   G       Y IL
Sbjct: 837 LRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL---FSEMKRRGVLHTSSTYDIL 893

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           +   S+     +  +    M + G  P + T+ S+
Sbjct: 894 LNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSM 928



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/490 (21%), Positives = 209/490 (42%), Gaps = 5/490 (1%)

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L++   +   + +AL    RM  +G   +   +  ++ G   +   D ++ ++  M  
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G++  +  YT +I   C+   ++EA  L++ M    ++PD +T   L++ LC + +  +
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLE 381
           A  +  +M  IG+ P    +  ++  L +  +  ES+  L +    G V     + AL++
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370

Query: 382 CCCNAGKFFLAKCIL-EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                GK   AK +L    +D    +  ++ + +   C    I  A ++L +M   SV+P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T+S+ + G  K      A    R++    +  + ++Y  L++G  + +    A++V+
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M   G   ++   + L+ GL     ++ A  L       G       YT +M GL K 
Sbjct: 491 RDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKT 550

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
                   V  +++ +  + D   Y + I  +    K  +   F   M   GL PD+ T 
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +++       +       + ++  +S   +   Y  L+ GL + G+  +A +LL+ M  
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS 670

Query: 681 KGWVPDATTH 690
            G+ P + TH
Sbjct: 671 AGFAPTSLTH 680



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 183/452 (40%), Gaps = 34/452 (7%)

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +++++  M   G+ L++  Y  ++         + A+ + + M+A  + P+ +TY  LI 
Sbjct: 206 ALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIG 265

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVT 373
             C+   +D+A  + E M+  G+ P       +V GLC  G+F E+       DK G   
Sbjct: 266 EYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIG--V 323

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
           +P++             +  C L                 I  L +     ++  LLG M
Sbjct: 324 APNH-------------VTYCTL-----------------IDSLAKARRGSESLGLLGEM 353

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           V   VV D   Y+A +    K    E+A  V R   + ++  + ++Y+ LV+  C+   I
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A +V   M +     +  +F+ +I GL     + KA         SG +    TY  +
Sbjct: 414 DGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTL 473

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G  K Q  +  L V   ML EG   +      L+  + +   ++     F  M + GL
Sbjct: 474 IDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGL 533

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
           + D     +L+ GL     +        +L+  +   D+ +YN+ IN L   G  S+A  
Sbjct: 534 LLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKS 593

Query: 674 LLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
            L  M   G  PD  T+  ++ +   E   S+
Sbjct: 594 FLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 147/355 (41%), Gaps = 8/355 (2%)

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
           T  +N  L      G   LA  +L +M  R ++ D  + +  +  LC    + +A  L  
Sbjct: 115 TVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAE 174

Query: 432 RMVVSSVVP--DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
            +V    +   D   ++A + G CK+ +   AL V  +++ Q + LD + Y+ LV G   
Sbjct: 175 MLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFH 234

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
                 A+EV   M  +G   +  ++  LI   C  + +D+A  L      SG      T
Sbjct: 235 SGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
            + ++ GL +  +  +   +  +M   G A +   YC LI S+++  +  +       MV
Sbjct: 295 LSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMV 354

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G+V D     +L+  L    ++      +    SD+   +   Y +L++   + G   
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414

Query: 670 QASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
            A  +L  M  K  +P+  T     +GL+    +G+  D  R   DS   P+ V+
Sbjct: 415 GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 9/266 (3%)

Query: 439 VP-DCATYSAFVLGKCKLCNYEDALRVFRQVSAQS----LVLDSISYSKLVEGLCQVEKI 493
           VP D  T ++ +L  C L +   AL + R  S       +  D++SY+  +  L +    
Sbjct: 72  VPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHG 131

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS-LAYSSGT-SYTTSTYT 551
             A  V   M K G S    + +  + GLC    V +A  L   L    G        + 
Sbjct: 132 RLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWN 191

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K+Q     L V+ +M  +G ALDV  Y  L+          D AL     +KA
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGD-ADAALEVVERMKA 250

Query: 612 -GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G+ P+  T  +L+     G  +    S    +V    + D    + L++GL ++G  S+
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 671 ASYLLDLMLGKGWVPDATTHGLLVGS 696
           A  L   M   G  P+  T+  L+ S
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDS 336


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 218/485 (44%), Gaps = 6/485 (1%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           I  NV T + +++ L +  + E +      M   GC P+   F  V++G   ++ ++ + 
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +   M + G + +   Y  +I  L +  KL+E++++   M      P    Y  L+  L
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
            +  R+D A+ + ++MI  G  P   +F +++ GLC+ GK  ++    +    +   P  
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N LL   C++G+   A  +  +M     + D  ++N  +  +C+   + +  +L   
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M  +  VP+  T+S  + G C+    E AL VF  +       +  +Y+ L+ GLC+ EK
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYT 551
           + +A E+F  M++      + ++N LI G C    +D+A +L R ++  +G   T  T+ 
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  KL +      ++A+M  +G A D   Y ILI  +S   KL +    +  M + 
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
             + D  + +S + GL     +    +          V +   + IL   L K G    A
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485

Query: 672 SYLLD 676
             L++
Sbjct: 486 QKLME 490



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/491 (21%), Positives = 223/491 (45%), Gaps = 21/491 (4%)

Query: 50  YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           Y + I+SL     P+   +VL+          +F +  + + F  +              
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARS-------------- 58

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
            N+E+   + Q+MV+  Y     +   L+       +++ ++++L  M   G   S+  +
Sbjct: 59  NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAY 118

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           + ++ A+ + +R       ++ EM++ G  P+      L+  L +  +++ A ++F++M 
Sbjct: 119 SSLVRALAKARR-VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K GC PN   + +++ GL ++ +++ + ++  EM       ++  Y  ++  +C+  ++E
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           E  +LF+ MRA   +P+ +T+  LI+ LC    L+ A ++   M+  G  P    +  ++
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 297

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA 405
            GLC   K  ++    E        P    +N+L+   C  G    A+ +  +M+     
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 357

Query: 406 DCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                ++N  I   C+  ++ +A EL+  M    +  D  TY   + G  +    ++AL 
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALE 417

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           V++Q+  +  +LD +S    V GLC+   I +A  VF    K+G   +  +F IL   L 
Sbjct: 418 VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLI 477

Query: 524 VMRKVDKAIRL 534
            + +V+ A +L
Sbjct: 478 KLGRVEDAQKL 488



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 174/429 (40%), Gaps = 24/429 (5%)

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
           N+S   LI  L     L  +LKI   + ++ +   +   Y  ++  L  A  V+    L 
Sbjct: 80  NVSYHILIHGLAKIGKLDESLKILSEMVMRGQ-TPSMQAYSSLVRALAKARRVDHASSLF 138

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
             M++  +   R     L+       +V  A      M   G + +V V+NV+L  +   
Sbjct: 139 DEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSS 198

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            +       ++ EM      P+V T N LL+ + +  R+E     F  M   G  PN  T
Sbjct: 199 GQ-LEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVIT 257

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F  +I GL     ++ ++ + G M + G +     YT +I  LCR  K+ +A  LF+ M 
Sbjct: 258 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMT 317

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKF 358
              + PD + Y  LI   C+   +D+A  +  +M    GL PT   F  ++ G C++GK 
Sbjct: 318 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 377

Query: 359 DESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI----A 405
             +   +          D C Y       L+     A K   A  + ++M ++K      
Sbjct: 378 GRANELVAEMGTKGLAADSCTY-----RILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
            C S+   +  LC+   I +AY +      S  VP+  T+        KL   EDA ++ 
Sbjct: 433 SCVSF---VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489

Query: 466 RQVSAQSLV 474
               A+ + 
Sbjct: 490 EPAKARDIT 498



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 164/398 (41%), Gaps = 31/398 (7%)

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           MR  ++  +  TY  +I  L +  + +++  +LE+M+  G  P    F  +++G      
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
            +++    +        P N                               S++I I  L
Sbjct: 61  MEKAREVYQHMVESGYKPDNV------------------------------SYHILIHGL 90

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  ++ ++ ++L  MV+    P    YS+ V    K    + A  +F ++       D 
Sbjct: 91  AKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDR 150

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           + + +L+ GLCQ  K+ +A E F  M K+GC  +   +N+L++GLC   ++++A  L + 
Sbjct: 151 LMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAE 210

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S   S    TY  ++  + K +R ++   +   M   G   +V  +  LI  +    +
Sbjct: 211 MKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGE 270

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L+     F  M++AG  P++ T  +L+ GL    ++        K+       D+  YN 
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330

Query: 658 LINGLWKEGLTSQASYLL-DLMLGKGWVPDATTHGLLV 694
           LI G  K G   +A  L  ++  G G  P   T   L+
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 152/636 (23%), Positives = 277/636 (43%), Gaps = 26/636 (4%)

Query: 61  LSPDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
           L P H+ +VL  T D +  AL+ F ++ + K F H+  ++C +I  L  A        L 
Sbjct: 69  LKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLL 128

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           Q ++     + RE   +L+  F                    F  S+  F++++ + V+E
Sbjct: 129 QTLLLRGGLDPREVFEALLDCF----------------EKCDFISSLG-FDLLIQSYVQE 171

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           KR F D V +++ M +  ++P V TL  +L  L +  R++  L  F  +   G  P+   
Sbjct: 172 KRMF-DSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYI 230

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  VI+          +  ++  M      L +  Y  +I  LC+  ++ EA+ +   + 
Sbjct: 231 YVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLI 288

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              L   E+TY  L+  LC+    +    ++++MI +G  PT+     +V GL   GK  
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVV 348

Query: 360 ESVNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPI 414
           ++ + +    K G + S   +NAL+   C  GKF  A+ + ++M ++ +   D +++I I
Sbjct: 349 DAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILI 408

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C   ++  A   LG+M+++ +      Y++ + G CKL N   A+  F ++  + L 
Sbjct: 409 DSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLK 468

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
              +SY+ L+ G C   K+ EA  ++  M+  G + ++ +F  LI  L    ++  A RL
Sbjct: 469 PTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRL 528

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                         TY  ++ G  K         +L QM+ +G   D   Y  LI S+  
Sbjct: 529 FDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCS 588

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             ++ +   F + + +     +     +LLHG     +L        ++V     +D   
Sbjct: 589 TGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVC 648

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           Y +LI+G  KE  TS    LL  M  +   PD   +
Sbjct: 649 YAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/511 (23%), Positives = 213/511 (41%), Gaps = 6/511 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V  EM++ G VP    L+ L+E L    ++  A D   R+ K G  P+   +  +I  L 
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + + D++  +  EM + G+      Y+ +I   CR  KL+ AI     M    +     
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  LIN  C+   L  A    ++MI  GL PT   +  ++ G C  GK  E+     + 
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEI 423
            G   +P+      L+     A +   A  + ++M ++ +   + ++N+ I   C+    
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA+ELL +MV   +VPD  TY   +   C      +A +    +  +   L+ + YS L
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + G C+  ++ +A+ V   M K G  +    + +LI G    +       L    +    
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                 YT ++ G  K    K    +   M+ EGC  ++  Y  LI  + +   +    L
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            +  M+ +   P+  T    L  LA    +       N ++    + ++  YNIL+ G  
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFC 796

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           K G   +A+ LLD M+     PD  T+  ++
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTII 827



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 135/629 (21%), Positives = 271/629 (43%), Gaps = 13/629 (2%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           IQK    +  TYC ++L L      E   G+   M++  +     AL SLV       +V
Sbjct: 288 IQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKV 347

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
             A  ++  +   G   S+ V+N ++ ++ ++ + F +   ++KEM + G+  N  T + 
Sbjct: 348 VDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK-FDEAELLFKEMGEKGLCANDVTYSI 406

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++      ++++A+    +M   G       +  +I G      +  +VS   EM D G
Sbjct: 407 LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG 466

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++  +  YT +I   C + KL EA RL+  M    + P+  T+  LI+ L    R+ DA 
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAF 526

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECC 383
            + ++M+   + P +  +  ++ G C+ G   ++   L    + G V  T  +  L+   
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586

Query: 384 CNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C+ G+   AK  ++ +        +  ++  +   C+   +R A  +   MV   V  D 
Sbjct: 587 CSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             Y+  + G  K  +      + + +  Q L  D + Y+ +++G  +   + +A  ++  
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   GC+ +  ++  LI  LC    +DKA  L      S ++    TY   +  L + + 
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR-EG 765

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
           + +  V L   +++G   +  +Y IL++   +  ++++     + M+   + PD  T  +
Sbjct: 766 SMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           +++       L       + +++     D+  YN LI G    G   +A  L D M+ +G
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885

Query: 683 WVPDATTHGLLVGSSVGEEIDSRRFAFDS 711
             P+  TH  L   +      SR+F+  +
Sbjct: 886 VKPNQATHKSLSHGA------SRKFSIST 908



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 208/461 (45%), Gaps = 18/461 (3%)

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D +S LG  FDL IQ              +E ++ +++ +F++MR  +LMP   T  E++
Sbjct: 154 DFISSLG--FDLLIQ-----------SYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVL 200

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV 372
           N L +  R+D    +  +++ +G+ P   ++V ++R  CE+  F ++   ++  +     
Sbjct: 201 NGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLN 260

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLG 431
              +N L+   C   + + A  I   +  + +   + ++   +  LC+ +E      ++ 
Sbjct: 261 VVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMD 320

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M+    VP  A  S+ V G  +     DA  +  +V     +     Y+ L+  LC+  
Sbjct: 321 EMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDG 380

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K  EA  +F  M + G   +  +++ILI   C   K+D AI        +G   T   Y 
Sbjct: 381 KFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYN 440

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  KL      +    +M+ +G    V +Y  LI     + KL +    ++ M   
Sbjct: 441 SLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK 500

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+ P+  T  +L+  L   +++       ++++  + + +   YN++I G  KEG T +A
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA 560

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFD 710
             LL+ M+ KG VPD  T+  L+ S  S G   ++++F  D
Sbjct: 561 FELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDD 601



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 195/452 (43%), Gaps = 8/452 (1%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           +LS+A+  F  + I K  + T  +Y  +I      G + E   L   M  +         
Sbjct: 451 NLSAAVSFFDEM-IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTF 509

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +L+ +     R+  A R+   M       +   +NV++    +E      F  +  +MV
Sbjct: 510 TTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELL-NQMV 568

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G+VP+  T   L+  L  T R+  A      +H++    N   +  ++ G     R+ 
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLR 628

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D++ +  EM   G+ ++L  Y  +I    +E        L K M    L PD++ Y  +I
Sbjct: 629 DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMI 688

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +   +   +  A  I + MI  G TP    +  ++  LC+ G  D++    ++     ++
Sbjct: 689 DGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST 748

Query: 375 PHNALLECC-----CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
           P N +  CC        G    A  +   M    +A+  S+NI +R  C+   + +A +L
Sbjct: 749 P-NHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKL 807

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M+ +++ PDC TYS  +   C+  N + A+  +  +  + L  D+++Y+ L+ G C 
Sbjct: 808 LDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCI 867

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             ++ +A E+   M + G   + ++   L +G
Sbjct: 868 AGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 201/438 (45%), Gaps = 5/438 (1%)

Query: 183  FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            F D   ++ EM+++  +P++     +L  + + N+ +  +  F +M   G   +  +F I
Sbjct: 596  FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +I      SR   ++++LG+M  LG Q  +     ++   C+ N+ +EA+ L   M  L 
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            L P+ + Y  +IN LC+N  L++A +I   M   G+      +  ++ GLC  G++ ++ 
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 363  NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
              L D       P+     AL++     G    AK + ++M  R +  +  ++N  I   
Sbjct: 776  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            C    +  A  +   MV     PD  TY+  + G CK    ED +++F +++ Q LV D+
Sbjct: 836  CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             +Y+ L+ G CQ  K+  A +VF  M   G      ++NIL+  LC   K++KA+ +   
Sbjct: 896  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVED 955

Query: 538  AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               +       TY  I+ G+ +  + K+   +   +  +G  LD  AY  +I  +     
Sbjct: 956  LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGL 1015

Query: 598  LKDCALFFNVMVKAGLVP 615
             ++       M + G +P
Sbjct: 1016 RREADKLCTRMKEDGFMP 1033



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 216/470 (45%), Gaps = 21/470 (4%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D + ++ EMV++  +P+V     LL  +    R E+ +   ++M   G   +  +F I
Sbjct: 46  FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I      SR+  ++SILG+M  LG    +  +  ++   C  N++ +A  L   M    
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDES 361
             P+ + Y  LI+CLC+N  ++ A ++L +M   G    D V +  ++ GLC  G++ ++
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRW 416
              L D      +P      AL++     G    A+ + ++M    I  +  ++N  I  
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC +  +  A +    M      P+  TY+  + G CK    ED +++F+++  + LV D
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           + +Y+ L+ G CQV K+  A ++F  M   G +    +  IL++GLCV  ++  A+ ++ 
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAM-VKF 404

Query: 537 LAYSSGTSYTTSTYTKIML-GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               SG  Y       IM+ GL K  + ++   +  ++ VEG   D   Y I+I  + + 
Sbjct: 405 NDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKN 464

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
              ++    F  M + G++   E          DG   HL   G N  VS
Sbjct: 465 GPRREADELFRRMKEDGIICQAE----------DG---HLGEHGTNNQVS 501



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 203/451 (45%), Gaps = 12/451 (2%)

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G + + R +D++ +  EM        +  +T ++  +    + E  I   + M    +  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D  ++  LI+C C   RL  A  IL  M+ +G  P+   F  ++ G C   +  ++ + +
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 366 ED--KCGYVTSP--HNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCE 419
               K GY  +   +N L++C C  G   +A  +L +M    R  AD  ++N  +  LC 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           + E R+A  +L  M    + PD  T++A +    K  N ++A  +++Q+   S+  ++++
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ GLC   ++  A + F  M+  GC  +  ++N LI G C  R+V+  ++L    Y
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 540 SSGTSYTTSTYTKIMLG---LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
             G    T TY  ++ G   + KL+ AKD   + + M+  G   D+  +CIL+  +    
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGKLRVAKD---IFSWMVSCGVTPDIITHCILLHGLCVNG 395

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           ++    + FN M              ++HGL    ++        +L  +    D+  Y 
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYT 455

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           I+I GL K G   +A  L   M   G +  A
Sbjct: 456 IMILGLCKNGPRREADELFRRMKEDGIICQA 486



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 182/376 (48%), Gaps = 6/376 (1%)

Query: 137  LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
            L+  F    R + A+ +L  M   GF+ S+     +L    +  R F + V +   M + 
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR-FQEAVSLVDSMAEL 714

Query: 197  GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            G+ PNV   N ++  L +   + +AL+ F  M KKG   ++ T+  +I GL  + R  D+
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 257  VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
              +L +M    I   + F+T +I    +E  L EA  L+K M    + P+ LTY  LIN 
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 317  LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS 374
             C   RL DA  + + M+  G  P    +  ++ G C+  + ++ +    +    G V  
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 375  P--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
               +N L+   C AGK  +A+ +  +M D  +  D  ++NI +  LC N +I KA  ++ 
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 432  RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
             +  + +  D  TY+  + G C+    ++A  +FR ++ + + LD+I+Y  ++ GLC+  
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 492  KITEAVEVFCCMSKNG 507
               EA ++   M ++G
Sbjct: 1015 LRREADKLCTRMKEDG 1030



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 194/416 (46%), Gaps = 5/416 (1%)

Query: 217  RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            + + A   F  M +    P+   F  V+  +   ++ D  + +  +M +LGI  +L  +T
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 277  CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             +I   CR ++   A+ L   M  L   P  +T   L+N  C+  R  +A  +++ M  +
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 337  GLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP--HNALLECCCNAGKFFLA 392
            GL P   ++  ++ GLC+    + ++      +K G V     +N L+   CN+G++  A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 393  KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
              +L  M  RKI  +   +   I    +   + +A  L   M+  SV P+  TY++ + G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 452  KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             C      DA  +F  + ++    D ++Y+ L+ G C+ +++ + +++FC M+  G    
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 512  SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            + ++N LI+G C   K++ A ++ +     G      TY  ++  L    + +  LV++ 
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 572  QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             +      +D+  Y I+IQ M   +K+K+    F  + + G+  D    ++++ GL
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 193/439 (43%), Gaps = 10/439 (2%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           Y   RE L +    F++  R   A+ + + M       SV  F  +L AI   +R +   
Sbjct: 29  YSGYREKLRT---GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRR-YETV 84

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           ++  ++M   GI  ++ +   L+      +R+  AL    +M K G  P+  TF  ++ G
Sbjct: 85  IYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHG 144

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMP 305
               +R+ D+ S++  M   G +  +  Y  +I  LC+   +  A+ L  +M +   L  
Sbjct: 145 FCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAA 204

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV--- 362
           D +TY  L+  LC +     A  IL DM    + P    F  ++    + G  DE+    
Sbjct: 205 DLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELY 264

Query: 363 -NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN 420
              L+   G  T  +N+L+   C  G+ + AK   + MA +    +  ++N  I   C++
Sbjct: 265 KQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKS 324

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             +    +L  RM    +V D  TY+  + G C++     A  +F  + +  +  D I++
Sbjct: 325 RRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITH 384

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
             L+ GLC   +I  A+  F  M      L   ++NI+I+GLC   KV++A  L      
Sbjct: 385 CILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV 444

Query: 541 SGTSYTTSTYTKIMLGLVK 559
            G      TYT ++LGL K
Sbjct: 445 EGVKPDARTYTIMILGLCK 463



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 179/439 (40%), Gaps = 30/439 (6%)

Query: 252  RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            + DD+  +  EM        +  +T ++  + + NK +  I LF  M  L +  D  ++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 312  ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
             LI+C C   R   A  +L  M+ +G  P+      ++ G C+  +F E+V+ ++     
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 372  VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
               P+  +                              +N  I  LC+N ++  A E+  
Sbjct: 715  GLEPNVVI------------------------------YNTVINGLCKNRDLNNALEIFY 744

Query: 432  RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
             M    +V D  TY+  + G C    + DA R+ R +  + +  + I ++ L++   +  
Sbjct: 745  GMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 804

Query: 492  KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
             + EA  ++  M +     +  ++N LI G C+  ++  A  +  L  S G      TY 
Sbjct: 805  NLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYN 864

Query: 552  KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
             ++ G  K +R +D + +  +M  +G   D   Y  LI    +  KL      FN MV  
Sbjct: 865  TLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 924

Query: 612  GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            G+ PD  T   LL  L +  ++      +  L  +   +D   YNI+I G+ +     +A
Sbjct: 925  GVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEA 984

Query: 672  SYLLDLMLGKGWVPDATTH 690
              L   +  KG   DA  +
Sbjct: 985  WCLFRSLTRKGVKLDAIAY 1003



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 168/380 (44%), Gaps = 36/380 (9%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           T+  ++    L   + +   L  +MVK  Y PNV     +L+     +  VN A+ +L  
Sbjct: 137 TFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNV-VVYNTLIDCLCKNGDVNIALELLNE 195

Query: 157 MNSGGFKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           M   G +L+ D+  +N +L  +      +     + ++M K  I P+V T   L++   +
Sbjct: 196 MEKKG-RLAADLVTYNTLLTGLCYSGE-WRQAARILRDMTKRRINPDVFTFTALIDAFVK 253

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              ++ A + +++M +    PN+ T+  +I GL  + R+  +      M   G    +  
Sbjct: 254 QGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVT 313

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I   C+  ++E+ ++LF+ M    L+ D  TY  LI+  C+  +L  A DI   M+
Sbjct: 314 YNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMV 373

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G+TP       ++ GLC  G+   ++    D                  +G+ +L   
Sbjct: 374 SCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM----------------RSGEKYLGIV 417

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                         ++NI I  LC+ +++ +A+EL  R+ V  V PD  TY+  +LG CK
Sbjct: 418 --------------AYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463

Query: 455 LCNYEDALRVFRQVSAQSLV 474
                +A  +FR++    ++
Sbjct: 464 NGPRREADELFRRMKEDGII 483



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 7/368 (1%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y E +      ++ DDA  +  +M+     P+   F  ++  + ++ KFD  V +L  K 
Sbjct: 583 YRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFD-IVIYLFHKM 641

Query: 370 GYVTSPHN-----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
             +   H+      L+ C C   +F LA  +L KM          +    +   C+    
Sbjct: 642 ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRF 701

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           ++A  L+  M    + P+   Y+  + G CK  +  +AL +F  +  + +V D+++Y+ L
Sbjct: 702 QEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTL 761

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC   + T+A  +   M K     +   F  LI        + +A  L         
Sbjct: 762 ISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TY  ++ G     R  D   +   M+ +GC  DV  Y  LI    +  +++D   
Sbjct: 822 HPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 881

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  M   GLV D  T  +L+HG     +L++     N++V      D   YNIL++ L 
Sbjct: 882 LFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLC 941

Query: 664 KEGLTSQA 671
             G   +A
Sbjct: 942 NNGKIEKA 949



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 124/590 (21%), Positives = 225/590 (38%), Gaps = 50/590 (8%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A R+L +M        V  F  ++ A V++     +   +YK+M+++ I PN  T N L+
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQG-NLDEAQELYKQMLQSSIGPNTVTYNSLI 283

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L    R+  A   F  M  KGC PN  T+  +I G   + RV+D + +   M+  G+ 
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV 343

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT-------------------- 309
            +   Y  +I   C+  KL  A  +F  M +  + PD +T                    
Sbjct: 344 GDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVK 403

Query: 310 ---------------YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
                          Y  +I+ LC+  ++++A ++   + V G+ P    +  ++ GLC+
Sbjct: 404 FNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463

Query: 355 VGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW 410
            G   E+        ED  G +    +  L       +  L   I+     R I +    
Sbjct: 464 NGPRREADELFRRMKED--GIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGD- 520

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
              + +   +  +  +   L  +  SS V         +L +    N E   R F   S 
Sbjct: 521 ---LYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGN--NPES--RSFSGASH 573

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                    Y + +       K  +A  +FC M ++    S   F  ++  +  M K D 
Sbjct: 574 HHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDI 633

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
            I L     + G S+   ++T ++    +  R    L +L +M+  G    +     L+ 
Sbjct: 634 VIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLN 693

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              + N+ ++     + M + GL P+     ++++GL     L+        +     V 
Sbjct: 694 GFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVA 753

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           D+  YN LI+GL   G  + A+ LL  M+ +   P+      L+ + V E
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 803



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 119/311 (38%), Gaps = 42/311 (13%)

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           KF +   +  KM +  I+ D  S+ I I   C       A  LLG+M+     P   T  
Sbjct: 630 KFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLG 689

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G C+   +++A+ +   ++   L  + + Y+ ++ GLC+   +  A+E+F  M K 
Sbjct: 690 SLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK 749

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRA 563
           G    + ++N LI GLC   +   A RL               +T ++   VK   L  A
Sbjct: 750 GIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 809

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           K+L     +M+      ++  Y  LI     Q +L D    F++MV  G  PD  T    
Sbjct: 810 KNLY---KEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVT---- 862

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
                                          YN LI G  K         L   M  +G 
Sbjct: 863 -------------------------------YNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 684 VPDATTHGLLV 694
           V DA T+  L+
Sbjct: 892 VGDAFTYNTLI 902



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 10/260 (3%)

Query: 92   FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGA 150
            F    DT+ K        GN+ E + L + M++   +PN+     SL+  F    R+  A
Sbjct: 793  FTALIDTFVK-------EGNLLEAKNLYKEMIRRSVHPNIL-TYNSLINGFCIQGRLGDA 844

Query: 151  MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
              +   M S G    V  +N ++    + KR   D + ++ EM   G+V +  T N L+ 
Sbjct: 845  KHMFDLMVSKGCFPDVVTYNTLITGFCKSKR-VEDGMKLFCEMTHQGLVGDAFTYNTLIH 903

Query: 211  VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
               +  ++  A   F RM   G  P+  T+ I++  L  N +++ ++ ++ ++    + +
Sbjct: 904  GYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV 963

Query: 271  ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
            ++  Y  II  +CR +K++EA  LF+ +    +  D + Y  +I+ LC N    +A+ + 
Sbjct: 964  DIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLC 1023

Query: 331  EDMIVIGLTPTDDVFVDIVR 350
              M   G  P++ ++ + +R
Sbjct: 1024 TRMKEDGFMPSERIYDETLR 1043



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 6/251 (2%)

Query: 66   LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-K 124
            LI       +L  A  ++K + I++       TY  +I    + G + + + +   MV K
Sbjct: 796  LIDTFVKEGNLLEAKNLYKEM-IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854

Query: 125  ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGF 183
              +P+V     +L+  F    RV   M++   M   G       +N ++ G     K   
Sbjct: 855  GCFPDV-VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNV 913

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            A  VF    MV  G+ P++ T N LL+ L    +IE AL     + K     +  T+ I+
Sbjct: 914  AQKVF--NRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971

Query: 244  IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
            I+G+  N +V ++  +   +   G++L+   Y  +I  LCR     EA +L   M+    
Sbjct: 972  IQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGF 1031

Query: 304  MPDELTYEELI 314
            MP E  Y+E +
Sbjct: 1032 MPSERIYDETL 1042



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 1/220 (0%)

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           KL  G     +  +A+++F  M ++    S   F  L+  +  +R+ +  I         
Sbjct: 35  KLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELF 94

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S+   ++T ++    +  R    L +L +M+  G    +  +  L+     +N++ D 
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL-DSSMYNILIN 660
                 MVK+G  P+     +L+  L     +++    +N++     +  D   YN L+ 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           GL   G   QA+ +L  M  +   PD  T   L+ + V +
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQ 254


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 141/602 (23%), Positives = 247/602 (41%), Gaps = 76/602 (12%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL----- 222
           +F+ +L +I  E +  ++   +Y  M K G++P+V +LN  LE L  T R E  L     
Sbjct: 113 LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSE 172

Query: 223 --------DQF---------------RR-------MHKKGCCPNSRTFEIVIKGLIANSR 252
                   DQF               +R       M + G  P    + +VI GL    R
Sbjct: 173 IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKR 232

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + D+  +  EM D  +      Y  +I   C+  +LEEA  + + M+  ++ P  +T+  
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---------- 362
           L+N LC    +++A  +LE+M V G  P    +  +  G  + G  D S+          
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352

Query: 363 -----------------------------NFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
                                         FLE+    V    N ++   C  G    A 
Sbjct: 353 VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAY 412

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             +EKM    +  +  ++N  ++  CE + + +A + + +MV   V+P+  TY+  + G 
Sbjct: 413 TTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY 472

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            + C ++   ++  ++  + L  + ISY  L+  LC+   I EA  +   M   G   ++
Sbjct: 473 GRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNA 532

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             +N+LI G C+  K+  A R      +     T  TY  ++ GL K  +  +   + ++
Sbjct: 533 QIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASE 592

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           +  +G + DV  Y  LI   S    ++     +  M K+G+ P   T   L+ G      
Sbjct: 593 ITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-EG 651

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L LV     +++  + V D  +YN LI+   + G   +A  L   M  +G  PD  T+  
Sbjct: 652 LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNC 711

Query: 693 LV 694
           L+
Sbjct: 712 LI 713



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 152/623 (24%), Positives = 269/623 (43%), Gaps = 83/623 (13%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ ++  M  GG    V V+NVV+G + +EKR   D   ++ EM+   + PN  T N L+
Sbjct: 201 AIELMTCMKRGGVSPGVFVYNVVIGGLCKEKR-MKDAEKLFDEMLDRRVAPNRITYNTLI 259

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM------ 263
           +   +  ++E A +   RM  +   P   TF  ++ GL     ++++  +L EM      
Sbjct: 260 DGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFV 319

Query: 264 ---------FDLGIQ------------------LELSFYTCIIPM--LCRENKLEEAIRL 294
                    FD  ++                  +++  YTC I +  LC+E  +E+A  +
Sbjct: 320 PDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEV 379

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            K      L P  + +  ++N  C+   ++ A   +E M  +GL P    +  +V+  CE
Sbjct: 380 LKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCE 439

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
           +   +E+   ++        P    +N L++    +  F     ILE+M  + +  +  S
Sbjct: 440 MKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVIS 499

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +   I  LC++  I +A  +LG MV   VVP+   Y+  + G C     +DA R F ++ 
Sbjct: 500 YGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMV 559

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           A+ +V   ++Y+ L+ GLC+  K+ EA  +   +++ G S    ++N LI G      V 
Sbjct: 560 AREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQ 619

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           KA+ L      SG   T +TY +++ G       K+ LV++ ++  E             
Sbjct: 620 KALELYETMKKSGIKPTLNTYHRLIAGC-----GKEGLVLVEKIYQE------------- 661

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
                             M++  LVPDR    +L+H   +   +    S  + + +    
Sbjct: 662 ------------------MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQ 703

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVGEEIDSR--- 705
            D   YN LI G +KEG   +   L++ M  +G +P   T+  L+VG    ++ D     
Sbjct: 704 PDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVW 763

Query: 706 -RFAFDSSSFPD-SVSDILAEGL 726
            R  F++   P  S+ D L  GL
Sbjct: 764 YREMFENGFTPSVSICDNLITGL 786



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 189/431 (43%), Gaps = 6/431 (1%)

Query: 97  DTYCKMILK-LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
           D  C ++L  L   GN+E+ E + +  ++     V     ++V  +     +N A   + 
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIE 416

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M + G + +   +N ++    E K    +     K+MV+ G++PNV+T N L++    +
Sbjct: 417 KMEAVGLRPNHVTYNSLVKKFCEMK-NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
              +        M KKG  PN  ++  +I  L  ++ + ++  ILG+M   G+      Y
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C   KL++A R F  M A +++P  +TY  LIN LC+  ++ +A ++  ++  
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            GL+     +  ++ G    G   +++   E        P    ++ L+  C   G   +
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLV 655

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            K   E +    + D   +N  I    E+ +++KA  L   M    + PD  TY+  +LG
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K         +   +  + L+  + +Y  L+ G C+++    A   +  M +NG + S
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775

Query: 512 SSSFNILIYGL 522
            S  + LI GL
Sbjct: 776 VSICDNLITGL 786



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 183/406 (45%), Gaps = 11/406 (2%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M   G+ PN  T N L++   E   +E A    ++M +KG  PN  T+  +I G   +
Sbjct: 416 EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              D    IL EM   G++  +  Y C+I  LC++  + EA  +   M    ++P+   Y
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--- 367
             LI+  C   +L DA    ++M+   + PT   +  ++ GLC+ GK  E+ N   +   
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL--CENEEIR 424
               +    +N+L+    +AG    A  + E M    I    + N   R +  C  E + 
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKP--TLNTYHRLIAGCGKEGLV 653

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
              ++   M+  ++VPD   Y+A +    +  + + A  +   + AQ +  D ++Y+ L+
Sbjct: 654 LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLI 713

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G  +  ++ +   +   M   G    + +++ILI G C ++  D A       + +G +
Sbjct: 714 LGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFT 773

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG---CALDVEAYCI 587
            + S    ++ GL +  R+ D  V+ ++M ++G   C  D +A  +
Sbjct: 774 PSVSICDNLITGLREEGRSHDADVICSEMNMKGKDDCRADEDASAV 819



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 109/272 (40%), Gaps = 6/272 (2%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L  A + F  + + +    T  TY  +I  L   G V E E L   + ++          
Sbjct: 548 LKDAFRFFDEM-VAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYN 606

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  + +   V  A+ +   M   G K +++ ++ ++    +E  G      +Y+EM++
Sbjct: 607 SLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKE--GLVLVEKIYQEMLQ 664

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             +VP+    N L+    E   ++ A      M  +G  P+  T+  +I G     R+  
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             +++ +M   G+  +   Y  +I   C+    + A   ++ M      P     + LI 
Sbjct: 725 VKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLIT 784

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            L E  R  DA+ I  +M + G    DD   D
Sbjct: 785 GLREEGRSHDADVICSEMNMKG---KDDCRAD 813


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/567 (22%), Positives = 249/567 (43%), Gaps = 10/567 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ +L  M + G+      F  V+ A V+E    A+ + +  +MV  G   N+     L+
Sbjct: 94  ALSLLREMRAAGWIPPEGTFTSVITACVKEGN-VAEALRLKDDMVNCGKSMNLAVATSLM 152

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +       + SAL     + + G  PN  T+ ++I G   N  ++ +     EM   GI+
Sbjct: 153 KGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIR 212

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL-MPDELTYEELINCLCENLRLDDAND 328
             +     I+    +    + A  +F    AL+  + +  T+  L++ LC+  ++++A +
Sbjct: 213 SSVYSLNSILEGYLKCQSWQNAFTMFN--DALESGLANVFTFNTLLSWLCKEGKMNEACN 270

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCC 384
           + +++I  G++P    + +I+ G C     + +    ++      +P+      L++   
Sbjct: 271 LWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 330

Query: 385 NAGKFFLAKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G    A  I  +M D  I   D+   I I+ LC+     +  +L  + V    VP C 
Sbjct: 331 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 390

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+  + G  K  N   A  V+R++    +   +++Y+ L++G C+   I  A+++   M
Sbjct: 391 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 450

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G  +   ++  LI G C  R +  A  L +    +G S     Y  ++ G   +   
Sbjct: 451 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 510

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           ++ + +  +M+ EG   D++ Y  LI  + +  +L   +     M+  G++PD      L
Sbjct: 511 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 570

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           ++GL +  Q       +  +   + +    +YN LI G +KEG   +A  L D ML +G 
Sbjct: 571 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630

Query: 684 VPDATTHGLLV-GSSVGEEIDSRRFAF 709
           VPD  T+ +LV G   G+   SR   F
Sbjct: 631 VPDNITYDILVNGKFKGDGNFSRDLTF 657



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/571 (20%), Positives = 232/571 (40%), Gaps = 74/571 (12%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P++  +N LL  +   N    A +   +M   G   +  T  ++++  +    + ++ 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
               +    G++L+   Y+  + +LC +     A+ L + MRA   +P E T+  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP 375
            +   + +A  + +DM+  G +    V   +++G C  G    ++  + +  + G V + 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRKIAD--------------CDSW--------- 410
             ++ L++ CC  G    A     +M  + I                C SW         
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 411 ------------NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
                       N  + WLC+  ++ +A  L   ++   + P+  +Y+  +LG C+  N 
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
             A +V++++       ++++++ L++G  +   I  A  +F  M       + ++  I+
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 519 IYGLCVMRK--------------------------VDKAIRLRSLAYSS---------GT 543
           I GLC   +                          +D  I+  ++  +S         G 
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           + +T TYT ++ G  K       L +L  M  +G  +D++AY  LI    ++  +K    
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 480

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             N +  AGL P+R    S++ G  + + +        K+V++    D   Y  LI+GL 
Sbjct: 481 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           K G    AS +   ML KG +PD   H +L+
Sbjct: 541 KSGRLLYASDIHTEMLSKGILPDDRAHTVLI 571



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F     ++ A+++L +M   G K+ +  +  ++     ++R       +  E+  
Sbjct: 429 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC-KRRDMKSAHELLNELRG 487

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           AG+ PN    N ++      N +E A+D +++M  +G   + +T+  +I GL+ + R+  
Sbjct: 488 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 547

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  I  EM   GI  +   +T +I  LC + + E A ++ + M   +++P  L Y  LI 
Sbjct: 548 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 607

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
              +   L +A  + ++M+  GL P D++  DI+      GKF    NF  D
Sbjct: 608 GHFKEGNLQEAFRLHDEMLDRGLVP-DNITYDILVN----GKFKGDGNFSRD 654



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 1/148 (0%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  MI       NVEE   L + MV E  P   +   SL+   +   R+  A  +   M 
Sbjct: 497 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEML 556

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           S G  L  D  + VL   +  K  F +   + ++M    ++P+V   N L+   F+   +
Sbjct: 557 SKGI-LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNL 615

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + A      M  +G  P++ T++I++ G
Sbjct: 616 QEAFRLHDEMLDRGLVPDNITYDILVNG 643


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 220/456 (48%), Gaps = 6/456 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V+ K   +  + ++++M   GIV +  T N L+    +      +   F ++
Sbjct: 73  FNKILSSLVKAKH-HSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKI 131

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            KKG  PN+ TF  +IKGL     +  +++   ++   G  L+   Y  +I  LC+  ++
Sbjct: 132 LKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRI 191

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A++L K +    + P+ + Y  +I+ +C+   ++DA D+   M+   ++P D     +
Sbjct: 192 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSL 251

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILE-KMADRK 403
           + G C +G+  E+V  L        +P     + L++  C  GK   AK +L   M    
Sbjct: 252 IYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDI 311

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           I D  ++N  +   C  +EI KA ++   M    V+ +  +Y+  + G CK+   ++A+ 
Sbjct: 312 ILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVN 371

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  + ++ + ++Y+ L++GL ++ KI+  +++   M   G   +  ++N ++  LC
Sbjct: 372 LFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALC 431

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               VDKAI L +     G      TYT ++ GL +  + +D   V   +LV+G  LDV 
Sbjct: 432 KNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVY 491

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            Y ++IQ    +          + M   G +P+ +T
Sbjct: 492 TYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKT 527



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/486 (21%), Positives = 215/486 (44%), Gaps = 7/486 (1%)

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           E N + S+ +    +H K   P    F  ++  L+       ++S+  +M   GI  +  
Sbjct: 49  EENNLISSFNSL--LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFF 106

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  +I    +      +  +F  +      P+ +T+  LI  LC    +  A +  + +
Sbjct: 107 TFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKV 166

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
           +  G       +  ++ GLC+VG+   ++  L+   G +  P    +N +++  C A   
Sbjct: 167 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 226

Query: 390 FLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  +  +M  ++I+  D + N  I   C   ++++A  LL +M++ ++ P   T+S  
Sbjct: 227 NDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSIL 286

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           V   CK    ++A  +      + ++LD ++Y+ L++G C V++I +A ++F  M+  G 
Sbjct: 287 VDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGV 346

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +  S+  +I GLC ++ VD+A+ L              TY  ++ GL KL +   +L 
Sbjct: 347 IANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLK 406

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           ++ +M   G   ++  Y  ++ ++ + + +         +   G+ PD  T   L+ GL 
Sbjct: 407 LVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLC 466

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              +L         L+     LD   Y ++I G   +GL   A  LL  M   G +P+A 
Sbjct: 467 QSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAK 526

Query: 689 THGLLV 694
           T+ +++
Sbjct: 527 TYEIVI 532


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/517 (21%), Positives = 237/517 (45%), Gaps = 31/517 (5%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +LG++V+ K  +   +++ ++M   GI PN+   N L+    +   I  A   F ++
Sbjct: 88  FNKILGSLVKSKH-YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 146

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +IKGL    ++  +     ++  LG   +   Y  +I  LC+  + 
Sbjct: 147 LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A+ L + +    + P+ + Y  +I+ +C+   +++A D+  +MI  G++P    +  +
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           + G C +GK +++++                             K ILE +      D  
Sbjct: 267 ISGFCILGKLNDAIDLFN--------------------------KMILENIK----PDVY 296

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++NI +   C++ ++++   +   M+   + P+  TY++ + G C +     A  +F  +
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           +   +  D  SYS ++ G C+++K  EA+ +F  M +        +++ LI GL    ++
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A++L    +  G   T  TY  I+  L K+ +    + +L ++  +G   ++  Y IL
Sbjct: 417 SYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I+ + +  KL+D    F  ++  G   + +T   ++ G       +   + ++K+  +  
Sbjct: 477 IKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           + D+  Y I+I  L+K+     A  LL  M+ +G  P
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/484 (21%), Positives = 222/484 (45%), Gaps = 5/484 (1%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N ++ A+  F R+ ++   P +  F  ++  L+ +      + +  +M   GI+  L   
Sbjct: 64  NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 123

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C+   +  A  +F  +  +  +PD +T+  LI  LC   ++  A    + ++ 
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
           +G       +  ++ GLC+VG+   +++ L+   G +  P    +N +++  C       
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  +M  + I+ D  +++  I   C   ++  A +L  +M++ ++ PD  T++  V 
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK    ++   VF  +  Q +  + ++Y+ L++G C V+++ +A  +F  M++ G + 
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              S++I+I G C ++K D+A+ L    +         TY+ ++ GL K  R    L ++
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            QM   G    +  Y  ++ ++ + +++         +   G+ P+  T   L+ GL   
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +L         L+     L+   Y I+I G   EGL ++A  LL  M   G +PDA T+
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 691 GLLV 694
            +++
Sbjct: 544 EIII 547



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 135/293 (46%), Gaps = 1/293 (0%)

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N ++  A  L  R++  +  P    ++  +    K  +Y   L + +++  + +  + ++
Sbjct: 63  NNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 122

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            + L+   CQ+  I  A  VF  + K G    + +F  LI GLC+  ++ +A        
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + G  +   +Y  ++ GL K+   +  L +L ++       +V  Y  +I SM +   + 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    F+ M+  G+ PD  T  +L+ G     +L+      NK++ ++   D   +NIL+
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVGEEIDSRRFAFDS 711
           N   K+G   +   + D+M+ +G  P+  T+  L+ G  + +E++  +  F++
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355



 Score = 46.2 bits (108), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 5/196 (2%)

Query: 506 NGCSLSSSSFNILIYG-----LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
           N    SSS  N + Y            VD A+ L +      T+     + KI+  LVK 
Sbjct: 39  NFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKS 98

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           +    +L +  +M   G   ++    ILI    +   +      F  ++K G VPD  T 
Sbjct: 99  KHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITF 158

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +L+ GL    Q+       +K+V+     D   Y  LI+GL K G T  A  LL  + G
Sbjct: 159 TTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG 218

Query: 681 KGWVPDATTHGLLVGS 696
               P+   +  ++ S
Sbjct: 219 NLVQPNVVMYNTIIDS 234


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/668 (19%), Positives = 287/668 (42%), Gaps = 38/668 (5%)

Query: 34  PLSSETDMIKSHQTTDYEAKIQSLRH-------NLSPDHLIRVLDN-TNDLSSALKIFKW 85
           P  ++TD +    TT  + + +  R           PDHLI VL +  +D    L  F W
Sbjct: 57  PSVTDTDFVHHISTTIKQRRAEPFRRILKPFESKFRPDHLIWVLMSIRDDYKLVLDFFDW 116

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEM-EGLCQNMVKERYPNVREALISLVFSFVNH 144
             +++    + ++ C +++++ +A     M   L     ++ + +V  +        +  
Sbjct: 117 ARLRR--DPSLESLC-IVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFTERLIYT 173

Query: 145 YRVNGA--------MRVLVN----MNSG---------GFKLSVDVFNVVLGAIVEEKRGF 183
           Y+  GA         +VLV     + +G         G  +SVD  N+ L  +     G 
Sbjct: 174 YKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI 233

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                V++E  + G+  N  + N +L +L +  +++ A     +M  +G  P+  ++ ++
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           + G     ++   + ++ E+   G++     Y  II  LC+  ++ EA ++ ++M+   +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD + Y  LI+   ++  +     + ++M    + P    +  ++ GLC+ GK  E+  
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARK 413

Query: 364 FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
              +       P    + AL++  C AG+   A  +  +M ++ +  +  ++   +  LC
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC 473

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +  E+  A ELL  M    + P+  TY+A + G CK+ N E A+++  ++       D+I
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTI 533

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ +++  C++ ++ +A E+   M   G   +  +FN+L+ G C+   ++   RL    
Sbjct: 534 TYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM 593

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G     +T+  +M         +  + +   M  +G   D   Y ILI+   +   +
Sbjct: 594 LDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM 653

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           K+       MV+ G      +  SL+ G     +         ++ +   + +  +Y+I 
Sbjct: 654 KEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIF 713

Query: 659 INGLWKEG 666
           ++  ++EG
Sbjct: 714 VDVNYEEG 721



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 105/234 (44%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A RVFR+ S   +  +++SY+ ++  LCQ+ K+ EA  +   M   G      S+++++ 
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C + ++ K ++L       G      TY  I+  L K  R  +   VL  M  +    
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D   Y  LI    +   +      F+ M +  +VPD  T  S++HGL    ++       
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++++S     D   Y  LI+G  K G   +A  L + M+ KG  P+  T+  LV
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALV 469



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%)

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I  A  VF   S+ G   ++ S+NI+++ LC + KV +A  L       G      +Y+ 
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           I+ G  ++++   +L ++ ++  +G   +   Y  +I  + +  ++ +      VM    
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           + PD     +L+ G      + +     +++     V D   Y  +I+GL + G   +A 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            L   ML KG  PD  T+  L+
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALI 434


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 156/667 (23%), Positives = 285/667 (42%), Gaps = 70/667 (10%)

Query: 45  HQTTDYEA--KIQSLRHNLSP-------DHLIRVLDNTN-DLSSALKIFKWVSIQKRFQH 94
           HQ T+     + + LR +L P       DHLI VL     D    L  F W   + R   
Sbjct: 60  HQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA--RSRRDS 117

Query: 95  TADTYCKMILKLGLAG-NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA-MR 152
             ++ C +++ L +A  +++  + L  +  +    NV ++ +      V  Y+  G+  R
Sbjct: 118 NLESLC-IVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPR 176

Query: 153 VLVNMNSGGFKLSVDVFNVVL---GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN-YL 208
           V             DVF  VL   G + E +R       V+++M+  G+V +VD+ N YL
Sbjct: 177 VF------------DVFFQVLVDFGLLREARR-------VFEKMLNYGLVLSVDSCNVYL 217

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
             +  +  +  +A+  FR   + G C N  ++ IVI  +    R+ ++  +L  M   G 
Sbjct: 218 TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             ++  Y+ ++   CR  +L++  +L ++M+   L P+   Y  +I  LC   +L +A +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
              +MI  G+ P   V+  ++ G C+ G                             A K
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA-------------------------ASK 372

Query: 389 FFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           FF       +M  R I  D  ++   I   C+  ++ +A +L   M    + PD  T++ 
Sbjct: 373 FFY------EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK  + +DA RV   +       + ++Y+ L++GLC+   +  A E+   M K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              +  ++N ++ GLC    +++A++L     ++G +  T TYT +M    K        
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L +ML +G    +  + +L+        L+D     N M+  G+ P+  T  SL+   
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
              + L   ++    + S     D   Y  L+ G  K     +A +L   M GKG+    
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666

Query: 688 TTHGLLV 694
           +T+ +L+
Sbjct: 667 STYSVLI 673



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 205/477 (42%), Gaps = 17/477 (3%)

Query: 122 MVKERYPNVREALISLVFSFVNHY-----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
           +V   +P V        ++ V H+     R+  A  +L+ M   G+   V  ++ V+   
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291

Query: 177 VEEKRGFADFVFVYK---EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
                 F +   V+K    M + G+ PN      ++ +L    ++  A + F  M ++G 
Sbjct: 292 CR----FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P++  +  +I G      +  +     EM    I  ++  YT II   C+   + EA +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LF  M    L PD +T+ ELIN  C+   + DA  +   MI  G +P    +  ++ GLC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467

Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA-KCILEKMADRKIADCD 408
           + G  D +   L +       P    +N+++   C +G    A K + E  A    AD  
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++   +   C++ E+ KA E+L  M+   + P   T++  + G C     ED  ++   +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            A+ +  ++ +++ LV+  C    +  A  ++  M   G      ++  L+ G C  R +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            +A  L       G S + STY+ ++ G +K ++  +   V  QM  EG A D E +
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/446 (23%), Positives = 186/446 (41%), Gaps = 45/446 (10%)

Query: 81  KIFKWVSIQKR--FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           K++K + + KR   +  +  Y  +I  L     + E E     M+++          +L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKE 192
             F     +  A +    M+S      V  +  ++      G +VE  +       ++ E
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-------LFHE 411

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M   G+ P+  T   L+    +   ++ A      M + GC PN  T+  +I GL     
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D +  +L EM+ +G+Q  +  Y  I+  LC+   +EEA++L     A  L  D +TY  
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++  C++  +D A +IL++M+  GL PT   F  ++ G C  G  ++    L       
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN------ 585

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                           + LAK I          +  ++N  ++  C    ++ A  +   
Sbjct: 586 ----------------WMLAKGI--------APNATTFNSLVKQYCIRNNLKAATAIYKD 621

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M    V PD  TY   V G CK  N ++A  +F+++  +   +   +YS L++G  + +K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNIL 518
             EA EVF  M + G +     F+  
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFF 707



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 11/242 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L  +GN+EE   L                 +L+ ++     ++ A  +L  M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552

Query: 158 NSGGFKLSVDVFNVV-----LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
              G + ++  FNV+     L  ++E+     ++      M+  GI PN  T N L++  
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW------MLAKGIAPNATTFNSLVKQY 606

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
              N +++A   ++ M  +G  P+ +T+E ++KG      + ++  +  EM   G  + +
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           S Y+ +I    +  K  EA  +F  MR   L  D+  ++   +   +  R D   D +++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDE 726

Query: 333 MI 334
           +I
Sbjct: 727 II 728


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 240/519 (46%), Gaps = 25/519 (4%)

Query: 29  CANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLD-NTNDLS--SALKIFKW 85
           C + I L++ ++ IK   T    + ++ +  +L+P+HLI +++ N + LS  S L  FKW
Sbjct: 34  CHDPI-LTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKW 92

Query: 86  VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
           +S Q  F+ +  +YC M   L     + E + L Q +V  +  N   ++ + V      +
Sbjct: 93  LSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTH 152

Query: 146 RVNGAMRVLVN--MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF--------------V 189
           + N    VL+N   +SG F  ++  F +V    ++       ++F               
Sbjct: 153 QSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAF 212

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y+E++  G  P+V   N L+  L + ++I  A   F  + K+G  P   +F  +I G   
Sbjct: 213 YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCK 272

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           +  +D    +   M +  +  ++  Y+ +I  LC+E +L++A +LF  M    L+P+++T
Sbjct: 273 SGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVT 332

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           +  LIN  C   R D   +I + M+  G+ P    +  ++ GLC+VG   E+   + +  
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
                P    +  L++ CC  G    A  I ++M    I  D  ++   I   C   ++ 
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVI 452

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A   L  M+ + + PD ATY+  + G CK  + +   ++ +++     V   ++Y+ L+
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLL 512

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            GLC+  ++  A  +   M   G      ++NIL+ G C
Sbjct: 513 NGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 3/329 (0%)

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           CGY       N L+   C   K   A+ +  ++  R +     S+N  I   C++  + +
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            + L   M+ + V PD  TYS  + G CK    +DA ++F ++  + LV + ++++ L+ 
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G C   +    +E++  M + G      ++N LI GLC +  + +A +L       G   
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TYT ++ G  K    +  L +  +M+ EG  LD  A+  LI     + ++ +     
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M++AG+ PD  T   ++HG      +      + ++  D  V     YN+L+NGL K+
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G    A+ LLD ML  G VPD  T+ +L+
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 6/229 (2%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVD 203
           R +  M +   M   G K  V  +N ++  +  V + R     V    EM + G+ P+  
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI---EMTQRGLKPDKF 401

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T   L++   +   +ESAL+  + M K+G   ++  F  +I G     +V ++   L EM
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            + GI+ + + YT +I   C++  ++   +L K M+    +P  +TY  L+N LC+  ++
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
            +AN +L+ M+ +G+ P D  +  ++ G C+ G   E  + L+ + G V
Sbjct: 522 KNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN-REDFDKLQSEKGLV 569



 Score = 42.4 bits (98), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 89/223 (39%), Gaps = 16/223 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L   G++ E + L   M +      +     L+        +  A+ +   M
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426

Query: 158 NSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
              G +L    F  ++      G ++E +R         +EM++AGI P+  T   ++  
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAER-------TLREMLEAGIKPDDATYTMVIHG 479

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +   +++     + M   G  P   T+ +++ GL    ++ ++  +L  M +LG+  +
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
              Y  ++   C+    E+     K+     L+ D  +Y  LI
Sbjct: 540 DITYNILLEGHCKHGNRED---FDKLQSEKGLVQDYGSYTSLI 579


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 261/598 (43%), Gaps = 77/598 (12%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ S V    ++ + RV   M  GG  + V  +   + A  +  +   + V ++ +M + 
Sbjct: 212 LMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGK-IDEAVGLFLKMGEG 270

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G++PNV T N L++ L ++ R+E AL    RM +    P+  T+ I++ GL+   + D++
Sbjct: 271 GVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEA 330

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL--- 313
            S+L EM+  G       +  +I    R+  +++A+R+   M    L P+ +T+  L   
Sbjct: 331 NSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQG 390

Query: 314 --------------------------------INCLCENLRLDDANDILEDMIVIGLTPT 341
                                           ++ LC++ + D A  I++ +++  +   
Sbjct: 391 FCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVN 450

Query: 342 DDVFVDIVRGLCEVGKFDESVNF---LEDKCGYV--TSPHNALLECCCNAGKFFLAKCIL 396
           D +   +V GLC+ GK  E+++    L DK G    T+  NALL   C  G       + 
Sbjct: 451 DSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVC 510

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M +R +  D  S+N  I   C++ +I +A++L  +M+     PD  TY+  + G    
Sbjct: 511 KEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADK 570

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              +D  RV  +     +V +  +Y+ ++EG C  ++I  AV +F  +  N   LS   +
Sbjct: 571 GKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVY 630

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           NILI          +A +LR    SS    T  TY+ I+ G+                  
Sbjct: 631 NILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGM------------------ 672

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
             C  D+               +++    F  M   GL+P+     +L+ G     Q+  
Sbjct: 673 --CCNDL---------------VEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQ 715

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           + S + ++ S+    +   Y I+I+G  K G T +A+ LL+ M+  G  PD  T+ +L
Sbjct: 716 IESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 773



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 148/688 (21%), Positives = 301/688 (43%), Gaps = 69/688 (10%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSP---DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADT 98
           I +H+  D  +K ++L  NL+P   +H       T +L + L  F + S   +F+ T  +
Sbjct: 55  ILAHKVLD-SSKCKTLIPNLTPHEFEHSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRS 113

Query: 99  YCKMILKLGLAGN---------VEEMEGLCQNMVKE---RYPNVREALISLVFSFVNHYR 146
           YC ++++L LA N            +EG     +K+   R   +  A + L        R
Sbjct: 114 YC-ILIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDARLSEIASAFLEL------GER 166

Query: 147 VNGAMRVLV-----NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPN 201
            +G + +L+          GF  + D F                 +F  K     G+ P+
Sbjct: 167 SHGELDLLIYILCSQFQHLGFHWAFDTF----------------MLFTSK-----GVFPS 205

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           + + N+L+  L ++N +  +   F  M + G   +  T+   I       ++D++V +  
Sbjct: 206 LKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFL 265

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +M + G+   +  Y  +I  LC+  +LEEA+     M    + P  +TY  L+N L +  
Sbjct: 266 KMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFE 325

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HN 377
           + D+AN +L +M   G +P + VF  ++ G    G  D+++   +D       P    HN
Sbjct: 326 KFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHN 385

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            LL+  C   +   A+ +LE +    ++ + D+ +  +  LC++ +   A +++  +++ 
Sbjct: 386 TLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLR 445

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRV-FRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           ++  + +  +  V G CK   + +A+ + FR    + L  ++ + + L+ GLC+   + E
Sbjct: 446 NIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEE 505

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
              V   M + G  L   S+N LI+G C   K+++A +L+      G    T TY  +M 
Sbjct: 506 VFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMK 565

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL    +  D+  VL +    G   ++  Y ++++     +++ +    FN      LV 
Sbjct: 566 GLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFN-----KLVY 620

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS-------MYNILINGLWKEGLT 668
           ++  +  +++ +   +  H  +    +     + + SS        Y+ +I+G+    L 
Sbjct: 621 NKVELSYVVYNILIAA--HSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLV 678

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGS 696
            +A  + + M  +G +P+   +  L+G 
Sbjct: 679 EEAKGIFEEMRNEGLMPNVFCYTALIGG 706



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 116/531 (21%), Positives = 213/531 (40%), Gaps = 93/531 (17%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVL 154
           TY  +I  L  +G +EE       MV+ +   V  +L++   LV   V   + + A  VL
Sbjct: 278 TYNNLIDGLCKSGRLEEALMFKGRMVENK---VNPSLVTYGILVNGLVKFEKFDEANSVL 334

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN-------- 206
           V M S GF  +  VFN ++      K    D + V  +M   G+ PN  T N        
Sbjct: 335 VEMYSKGFSPNEFVFNALIDG-YSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCR 393

Query: 207 ---------------------------YLLEVLFETNRIESALD---------------- 223
                                      Y+L +L ++++ +SAL                 
Sbjct: 394 TNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSL 453

Query: 224 --------------------QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
                                FR   KKG   N+ T   ++ GL     +++   +  EM
Sbjct: 454 LTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEM 513

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            + G+ L+   Y  +I   C+  K+EEA +L + M      PD  TY  L+  L +  ++
Sbjct: 514 VERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKM 573

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHN 377
           DD   +L +    G+ P    +  ++ G C   + D +V+          +  YV   +N
Sbjct: 574 DDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVV--YN 631

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            L+     AG F  A  + + M    I     +++  I  +C N+ + +A  +   M   
Sbjct: 632 ILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNE 691

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            ++P+   Y+A + G CKL   +    + +++++  +  + I+Y+ +++G C++    EA
Sbjct: 692 GLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEA 751

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV------DKAIRLRSLAYSS 541
            ++   M  NG S  + ++ +L  G C   ++      D A+ L  + Y++
Sbjct: 752 TKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEEITYTT 802


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 214/474 (45%), Gaps = 8/474 (1%)

Query: 201 NVDTLNY--LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           ++D ++Y  +++ L ++ RI+ A + F  +   GC PN   +  VI GL+   R++D + 
Sbjct: 105 SLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 164

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
              EM         + YT +I  LC+   L +A ++F+ M     +PD +TY  LI+   
Sbjct: 165 NFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 224

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTS 374
           +  ++D+A  +L+ M+  G  PT   +  IV G C++   +E+        E  C     
Sbjct: 225 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLF 284

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRM 433
              +LL    + G+   A  +L +M  R  A D   +   I  L     + +A  +   M
Sbjct: 285 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           +     PD  TY   +    K+ N E A  +   ++   +  D  +Y+ L++G  ++E++
Sbjct: 345 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERV 404

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTK 552
            +A  V+  M  +G   ++ +FN+L++GL    K D+A  L + +        T  +YT 
Sbjct: 405 DQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTI 464

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL K  R  +  +   +M+  G   +   Y  LI S+++  ++ +       MVK G
Sbjct: 465 LIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG 524

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           + PD +   +L+ GL D S +        +++      +   Y +L  G    G
Sbjct: 525 VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/490 (21%), Positives = 212/490 (43%), Gaps = 36/490 (7%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P + + N ++  L   ++++ A   F  M   GC P+   F  +I G     +    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA-IRLFKMMRALDLMPDELTYEELIN 315
             +L +      + ++  YT +I   C+   L+    R      +LD+    ++Y  +I 
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDV----ISYTTVIK 116

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L ++ R+D+A ++ E++   G +P    +  ++ GL + G+ ++ +   E+  G     
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSG----- 171

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                           + C+  +          ++ + I  LC+ + +  A ++  +MV 
Sbjct: 172 ----------------SSCVPTRT---------TYTVVIDGLCKAQMLPDACKVFEQMVQ 206

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
              VPD  TY+  + G  K    ++A ++   +  +     +++Y  +V G C+++ I E
Sbjct: 207 KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINE 266

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A EV   M + GC      F  L+       + ++A ++ +   + G +     YT ++ 
Sbjct: 267 AKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 326

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            L    R  +   V   M+ +GCA D   Y  +IQ+ S+   ++       +M K+G+ P
Sbjct: 327 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 386

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D     SL+ G     ++       +++V+     ++  +N+L++GL+K+G T +A  L 
Sbjct: 387 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 446

Query: 676 DLMLGKGWVP 685
             ML K  VP
Sbjct: 447 KEMLEKEEVP 456



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 184/469 (39%), Gaps = 47/469 (10%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P  ++Y  +I+ L    ++D+A      MI  G  P    F  ++ G C+ G+       
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 365 LEDKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
           L             + +++   C AG   L       +  +   D  S+   I+ L +++
Sbjct: 65  LNQALKRFRPDVFLYTSVIHGYCKAGD--LDTGYFRAVTPKASLDVISYTTVIKGLADSK 122

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            I +A EL   +  +   P+   Y+A + G  K    ED L+ F ++S  S V    +Y+
Sbjct: 123 RIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYT 182

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            +++GLC+ + + +A +VF  M + GC   + ++  LI G     K+D+A +L  +  + 
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242

Query: 542 GTSYTTSTYTKIMLGLVKLQ-----------------------------------RAKDL 566
           G   T  TY  I+ G  KL                                    RA++ 
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             VL +M   GCA DV  Y  LI  +    ++ +    F+ M++ G  PD  T  +++  
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 362

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            +    +      +  +       D   YN L++G  K     QA  + D M+  G  P+
Sbjct: 363 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422

Query: 687 ATT-----HGLLVGSSVGEEIDSRRFAFDSSSFPDSVSD--ILAEGLGN 728
           A T     HGL             +   +    P ++    IL +GLG 
Sbjct: 423 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK 471



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 10/278 (3%)

Query: 43  KSHQTTDYEAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTAD 97
           K      Y+   +      +PD      LI +L +T  +  A  +F  + I+K     A 
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDAL 354

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I      GNVE    + + M K        A  SL+  +V   RV+ A  V   M
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMV-KAGIVPNVDTLNYLLEVLFET 215
            + G K +   FNV++  +   K G  D  F ++KEM+ K  + P + +   L++ L + 
Sbjct: 415 VASGIKPNAVTFNVLMHGLF--KDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKA 472

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            R+  A  QF+ M  +G  P   T+  +I  L    R+ ++  ++ +M  LG+  ++  Y
Sbjct: 473 GRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAY 532

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           + +I  L   + ++ A  +F+ M      P+E+TY+ L
Sbjct: 533 SALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/567 (22%), Positives = 249/567 (43%), Gaps = 10/567 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ +L  M + G+      F  V+ A V+E    A+ + +  +MV  G   N+     L+
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGN-VAEALRLKDDMVNCGKSMNLAVATSLM 270

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +       + SAL     + + G  PN  T+ ++I G   N  ++ +     EM   GI+
Sbjct: 271 KGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIR 330

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL-MPDELTYEELINCLCENLRLDDAND 328
             +     I+    +    + A  +F    AL+  + +  T+  L++ LC+  ++++A +
Sbjct: 331 SSVYSLNSILEGYLKCQSWQNAFTMFN--DALESGLANVFTFNTLLSWLCKEGKMNEACN 388

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCC 384
           + +++I  G++P    + +I+ G C     + +    ++      +P+      L++   
Sbjct: 389 LWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 448

Query: 385 NAGKFFLAKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G    A  I  +M D  I   D+   I I+ LC+     +  +L  + V    VP C 
Sbjct: 449 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 508

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+  + G  K  N   A  V+R++    +   +++Y+ L++G C+   I  A+++   M
Sbjct: 509 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 568

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G  +   ++  LI G C  R +  A  L +    +G S     Y  ++ G   +   
Sbjct: 569 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 628

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           ++ + +  +M+ EG   D++ Y  LI  + +  +L   +     M+  G++PD      L
Sbjct: 629 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 688

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           ++GL +  Q       +  +   + +    +YN LI G +KEG   +A  L D ML +G 
Sbjct: 689 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 748

Query: 684 VPDATTHGLLV-GSSVGEEIDSRRFAF 709
           VPD  T+ +LV G   G+   SR   F
Sbjct: 749 VPDNITYDILVNGKFKGDGNFSRDLTF 775



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/502 (21%), Positives = 206/502 (41%), Gaps = 74/502 (14%)

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++L+   Y+  + +LC +     A+ L + MRA   +P E T+  +I    +   + +A
Sbjct: 188 GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 247

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLEC 382
             + +DM+  G +    V   +++G C  G    ++  + +  + G V +   ++ L++ 
Sbjct: 248 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDG 307

Query: 383 CCNAGKFFLAKCILEKMADRKIAD--------------CDSW------------------ 410
           CC  G    A     +M  + I                C SW                  
Sbjct: 308 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANV 367

Query: 411 ---NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
              N  + WLC+  ++ +A  L   ++   + P+  +Y+  +LG C+  N   A +V+++
Sbjct: 368 FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKE 427

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +       ++++++ L++G  +   I  A  +F  M       + ++  I+I GLC   +
Sbjct: 428 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487

Query: 528 --------------------------VDKAIRLRSLAYSS---------GTSYTTSTYTK 552
                                     +D  I+  ++  +S         G + +T TYT 
Sbjct: 488 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 547

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K       L +L  M  +G  +D++AY  LI    ++  +K      N +  AG
Sbjct: 548 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 607

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L P+R    S++ G  + + +        K+V++    D   Y  LI+GL K G    AS
Sbjct: 608 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYAS 667

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            +   ML KG +PD   H +L+
Sbjct: 668 DIHTEMLSKGILPDDRAHTVLI 689



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F     ++ A+++L +M   G K+ +  +  ++     ++R       +  E+  
Sbjct: 547 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC-KRRDMKSAHELLNELRG 605

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           AG+ PN    N ++      N +E A+D +++M  +G   + +T+  +I GL+ + R+  
Sbjct: 606 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 665

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  I  EM   GI  +   +T +I  LC + + E A ++ + M   +++P  L Y  LI 
Sbjct: 666 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 725

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
              +   L +A  + ++M+  GL P D++  DI+      GKF    NF  D
Sbjct: 726 GHFKEGNLQEAFRLHDEMLDRGLVP-DNITYDILVN----GKFKGDGNFSRD 772



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 7/275 (2%)

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           N  +A + F Q  A+ + LD  +YS  V  LC       A+ +   M   G      +F 
Sbjct: 173 NILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFT 232

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +I        V +A+RL+    + G S   +  T +M G       +  LV++ ++   
Sbjct: 233 SVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES 292

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   +   Y +LI    +   ++    F++ M   G+     ++ S+L G          
Sbjct: 293 GLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNA 352

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG 695
            +  N  + +S + +   +N L++ L KEG  ++A  L D ++ KG  P+  ++  +++G
Sbjct: 353 FTMFNDAL-ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILG 411

Query: 696 SSVGEEIDSR----RFAFDSSSFPDSVS-DILAEG 725
               + I++     +   D+   P++V+  IL +G
Sbjct: 412 HCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDG 446



 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 1/148 (0%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  MI       NVEE   L + MV E  P   +   SL+   +   R+  A  +   M 
Sbjct: 615 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEML 674

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           S G  L  D  + VL   +  K  F +   + ++M    ++P+V   N L+   F+   +
Sbjct: 675 SKGI-LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNL 733

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + A      M  +G  P++ T++I++ G
Sbjct: 734 QEAFRLHDEMLDRGLVPDNITYDILVNG 761


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 255/562 (45%), Gaps = 25/562 (4%)

Query: 50  YEAKIQSLRHN-LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           +E K Q L+ + +S   +I VL     LS A ++F  +  + R    A  Y  MI+  G 
Sbjct: 276 HELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETE-RAVPCAYAYNTMIMGYGS 334

Query: 109 AGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNM------NSG 160
           AG  E    L  + +KER   P+V  +  S++       +V+ A+ +   M      NS 
Sbjct: 335 AGQFENAYKLL-DQLKERGCIPSVV-SFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSS 392

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            + + +D+  + +   VEE     D      EM  AG+ PN+ T+N +++ L +  + E 
Sbjct: 393 TYNIIIDM--LCMAGKVEEAYMIRD------EMEHAGLFPNLLTVNIMVDRLCKAKKFEP 444

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A + F    ++GC PNS T+  +I GL     VDD+  +   M D G       YT +I 
Sbjct: 445 AYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIR 504

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                 + E+  ++FK M      PD       ++C+ +   ++    I ED+   G  P
Sbjct: 505 NFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLP 564

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ GL + G+  E+ +      + G+      +NA+++  C +GK   A  +L
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624

Query: 397 EKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M  +++     ++   I  L + + + +AY L        +  +   YS+ + G  K+
Sbjct: 625 EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKV 684

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A  +  ++  + L  +  +++ L++ L + E+I EA+  F  M +  CS ++ ++
Sbjct: 685 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY 744

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +ILI GLC ++K +KA          G      TYT ++ GL K+    D   +  +   
Sbjct: 745 SILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA 804

Query: 576 EGCALDVEAYCILIQSMSEQNK 597
            G   D  ++  LI+ MS  N+
Sbjct: 805 NGGTPDAASFNALIEGMSHANR 826



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 217/496 (43%), Gaps = 6/496 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           ++ + G +P+V + N +L  L +  +++ AL  F  M KK   PNS T+ I+I  L    
Sbjct: 347 QLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAG 405

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +V+++  I  EM   G+   L     ++  LC+  K E A  +F+        P+ +TY 
Sbjct: 406 KVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYC 465

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+ L +   +DDA  + E+M+  G      V+  ++R     G+ ++     ++    
Sbjct: 466 SLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRR 525

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKA 426
              P     N  ++C   AG     + I E +     + D  S++I I  L +  + R+ 
Sbjct: 526 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 585

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +   M       D   Y+A V G CK    + A  V  ++  + +     +Y  +++G
Sbjct: 586 SSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           L +++++ EA  +F      G  L+   ++ LI G   + ++D+A  +       G +  
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             T+  +M  LVK +   + L+    M    C+ +   Y ILI  +    K     +F+ 
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M K GLVP+  T  +++ GLA    +    S   +  ++    D++ +N LI G+    
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHAN 825

Query: 667 LTSQASYLLDLMLGKG 682
              +A ++ +    KG
Sbjct: 826 RAIEAYHVFEETRLKG 841



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 150/678 (22%), Positives = 292/678 (43%), Gaps = 30/678 (4%)

Query: 68  RVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY 127
           R LD+   + +A++  K       F+     Y  +I  +  A   E    L + M +  Y
Sbjct: 161 RRLDDAERVIAAMRRLK-------FRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGY 213

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
                   +LV +     RV GA+ ++  +     +  + ++NV +      K G  D  
Sbjct: 214 EVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCF--GKAGNVDMA 271

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +  + E+   G+ P+  +   ++ VL +  R+  A + F +M  +   P +  +  +I G
Sbjct: 272 WKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
             +  + +++  +L ++ + G    +  +  I+  L ++ K++EA+ LF+ M+  D  P+
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPN 390

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRGLCEVGKFDESVN 363
             TY  +I+ LC   ++++A  I ++M   GL P   T ++ VD    LC+  KF+ +  
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVD---RLCKAKKFEPAYE 447

Query: 364 FLEDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLC 418
             E       +P++    +L++     G    A  + E M D    A+   +   IR   
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            +      +++   M      PD    + ++    K  + E    +F  +     + D  
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           SYS L+ GL +  +  E   +F  M + G +L + ++N ++ G C   K+DKA  +    
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM 627

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
                  T +TY  I+ GL K+ R  +  ++  +   +G  L+V  Y  LI    +  ++
Sbjct: 628 KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 687

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            +  L    M+K GL P+  T  SL+  L    +++        +       ++  Y+IL
Sbjct: 688 DEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSIL 747

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDS----RRFAFDSS 712
           INGL +    ++A      M  +G VP+  T+  ++   + VG   D+     RF  +  
Sbjct: 748 INGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGG 807

Query: 713 SFPDSVS-DILAEGLGNT 729
           + PD+ S + L EG+ + 
Sbjct: 808 T-PDAASFNALIEGMSHA 824



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 156/655 (23%), Positives = 272/655 (41%), Gaps = 16/655 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I VL    + S A   F   S        AD Y   +L   L+ ++  ME + + M   
Sbjct: 84  VIPVLRTLRNPSLAAPFFLASSAASPHPLPADAY-NAVLPF-LSHDLAAMEKVLEEMSVL 141

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            Y     A   LV + V   R++ A RV+  M    F+ +   + V++GA+ E ++    
Sbjct: 142 GYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERA 201

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC--PNSRTFEIV 243
              + ++M + G    V     L+  L    R+E AL     +  KG C  P+   + + 
Sbjct: 202 LELL-RQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV--KGSCLEPDIVLYNVC 258

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I        VD +     E+   G++ +   YT +I +LC+  +L EA  LF  M     
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERA 318

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +P    Y  +I       + ++A  +L+ +   G  P+   F  I+  L +  K DE++ 
Sbjct: 319 VPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALT 378

Query: 364 FLE---DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
             E         +S +N +++  C AGK   A  I ++M    +  +  + NI +  LC+
Sbjct: 379 LFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCK 438

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            ++   AYE+          P+  TY + + G  K  N +DA R+F  +       + + 
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVV 498

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK--VDKAIRLRSL 537
           Y+ L+       +  +  ++F  M++ GC    +  N   Y  CV +   V+K   +   
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNT--YMDCVFKAGDVEKGRAIFED 556

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G      +Y+ ++ GL K  +A++   +   M  +G ALD  AY  ++    +  K
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L         M    + P   T  S++ GLA   +L        +  S    L+  +Y+ 
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV-GEEIDSRRFAFDS 711
           LI+G  K G   +A  +L+ M+ KG  P+  T   L+ + V  EEI+     F S
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQS 731



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 192/441 (43%), Gaps = 42/441 (9%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
              A ++F+  S Q+     + TYC +I  LG  GNV++   L +NM+   +        
Sbjct: 442 FEPAYEMFETAS-QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT 500

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+ +F  H R              G K                         ++KEM +
Sbjct: 501 SLIRNFFMHGR-----------KEDGHK-------------------------IFKEMNR 524

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P++  LN  ++ +F+   +E     F  +   G  P+ R++ I+I GL    +  +
Sbjct: 525 RGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARE 584

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + SI   M   G  L+   Y  ++   C+  KL++A  + + M+   + P   TY  +I+
Sbjct: 585 TSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIID 644

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L +  RLD+A  + E+    G+     V+  ++ G  +VG+ DE+   LE+      +P
Sbjct: 645 GLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 704

Query: 376 H----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
           +    N+L++    A +   A    + M + K + +  +++I I  LC  ++  KA+   
Sbjct: 705 NVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFW 764

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    +VP+  TY+  + G  K+ N  DA  +F +  A     D+ S++ L+EG+   
Sbjct: 765 QEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHA 824

Query: 491 EKITEAVEVFCCMSKNGCSLS 511
            +  EA  VF      GC ++
Sbjct: 825 NRAIEAYHVFEETRLKGCRIN 845


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 155/655 (23%), Positives = 273/655 (41%), Gaps = 59/655 (9%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP--NVREALISLVFSFVNHY 145
           ++ R  + A T  K +L+L +  N           + E YP  N   A+  L+       
Sbjct: 65  VRARMYNFAKTTLKHLLQLPIGLNS------VFGALMETYPICNSNPAVFDLLIRVCLRN 118

Query: 146 RVNG-AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           R+ G A++    M   G   SV   N+VLG++V+E++    + F +K M+  GI P+V T
Sbjct: 119 RMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSF-FKGMLAKGICPDVAT 177

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N LL  L E  + ++A    R+M + G  P + T+  ++       R   +  ++  M 
Sbjct: 178 FNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMA 237

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             GI +++  Y   I  LCR+++  +   L K MR   + P+E+TY  LI+      +++
Sbjct: 238 SKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIE 297

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
            A  + ++M +  L P    +  ++ G C  G   E++  ++    +   P    + ALL
Sbjct: 298 VATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALL 357

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                  +F +   ILE+M    +     S+   I  LC+N  + +A +LL  M+  SV 
Sbjct: 358 NGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVN 417

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  T+S  + G  ++    +A  +  ++    LV + I YS L+   C++  + EA+  
Sbjct: 418 PDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNA 477

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVD------------------------------ 529
           +  M+ +G      + N+L+   C   K++                              
Sbjct: 478 YAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGN 537

Query: 530 -----KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
                KA  +     S G   +  TY  ++ GL       + L    ++     A+D   
Sbjct: 538 SGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVI 597

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGI 640
           +   + S      L D     N MV    +PD  T  +L+ GL    +    L L    I
Sbjct: 598 FNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAI 657

Query: 641 NK-LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K L+S     + ++Y  L++GL K G    A Y+ + ML K   PD     +++
Sbjct: 658 EKGLLSP----NPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVII 708



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/516 (20%), Positives = 228/516 (44%), Gaps = 8/516 (1%)

Query: 188  FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +    M + G+ PN  T + ++     +     A   F +M+  G  P+  T+  ++KGL
Sbjct: 511  YFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570

Query: 248  IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
                 +++++     +  +   ++   +   +   CR   L +AI L   M   D +PD 
Sbjct: 571  CIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDN 630

Query: 308  LTYEELINCLCENLRLDDANDILEDMIVIGL-TPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY  LI  LC+  ++  A  +    I  GL +P   V+  +V GL + G    ++   E
Sbjct: 631  FTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFE 690

Query: 367  DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENE 421
            +       P     N +++     GK      IL  M  + +  +  ++NI +    +  
Sbjct: 691  EMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRH 750

Query: 422  EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
             + + + L   M+    +PD  ++ + +LG C+  +++ A+++ R ++ +  V+D  +++
Sbjct: 751  AMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFN 810

Query: 482  KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             L+   C+  ++ +A E+   M++     +  ++N L  GL       KA R+  +   S
Sbjct: 811  MLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLES 870

Query: 542  GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
            G+  T   Y  ++ G+ ++   K  + +  +M   G +    A   +++ ++   K+++ 
Sbjct: 871  GSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENA 930

Query: 602  ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILIN 660
                ++M++  ++P   T  +L+H     + +   +  +  ++    V LD   YN+LI+
Sbjct: 931  IWVLDLMLEMQIIPTVATFTTLMHVYCKEANV-AKALELRSIMEHCHVKLDVVAYNVLIS 989

Query: 661  GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            GL   G    A  L + M  +   P+ + + +L+ S
Sbjct: 990  GLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDS 1025



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/452 (21%), Positives = 194/452 (42%), Gaps = 37/452 (8%)

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEI 242
            +D + +  EMV    +P+  T   L+  L +  +I +AL    +  +KG   PN   +  
Sbjct: 612  SDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTS 671

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            ++ GL+ +     ++ I  EM +  ++ +   +  II    R+ K  +   +   M++ +
Sbjct: 672  LVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKN 731

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            L  +  TY  L++   +   +     + +DMI  G  P    +  ++ G C+   FD ++
Sbjct: 732  LCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAI 791

Query: 363  NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
              L     ++T                           +  + D  ++N+ I   CE  E
Sbjct: 792  KILR----WIT--------------------------LEGHVIDRFTFNMLITKFCERNE 821

Query: 423  IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
            ++KA+EL+ +M    V+P+  TY+A   G  +  ++  A RV + +     V  +  Y  
Sbjct: 822  MKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYIT 881

Query: 483  LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
            L+ G+C+V  I  A+++   M   G S  + + + ++ GL   +K++ AI +  L     
Sbjct: 882  LINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQ 941

Query: 543  TSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
               T +T+T +M    K   + +A +L  ++    V+   LDV AY +LI  +     ++
Sbjct: 942  IIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVK---LDVVAYNVLISGLCANGDIE 998

Query: 600  DCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
                 +  M +  L P+    + L+     G+
Sbjct: 999  AAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGN 1030



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 179/431 (41%), Gaps = 11/431 (2%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           ++ LI     N  + DA      M   GL P+      ++  L +  K D   +F +   
Sbjct: 108 FDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGML 167

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIR 424
                P     N LL   C  GKF  A  +L KM +  +     ++N  + W C+    +
Sbjct: 168 AKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYK 227

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A +L+  M    +  D  TY+ F+   C+         + +++    +  + I+Y+ L+
Sbjct: 228 AASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLI 287

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G  +  KI  A +VF  MS      +S ++N LI G C    + +A+RL  +  S G  
Sbjct: 288 SGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLR 347

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL K      +  +L +M + G  +   +Y  +I  + +   L++    
Sbjct: 348 PNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQL 407

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            + M+K  + PD  T   L++G     +++     + K+     V +  +Y+ LI    K
Sbjct: 408 LDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCK 467

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSSF---PDSVS 719
            G   +A     +M   G V D  T  +LV +    G+  ++  F    S     P+SV+
Sbjct: 468 MGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVT 527

Query: 720 -DILAEGLGNT 729
            D +  G GN+
Sbjct: 528 FDCIINGYGNS 538



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/381 (19%), Positives = 152/381 (39%), Gaps = 45/381 (11%)

Query: 136  SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMV 194
            SLV   + H     A+ +   M +   +     FNV++      ++G    V  +   M 
Sbjct: 671  SLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQY--SRKGKTSKVNDILSTMK 728

Query: 195  KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
               +  N+ T N LL    + + +      ++ M + G  P+  ++  +I G   +   D
Sbjct: 729  SKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFD 788

Query: 255  DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
             ++ IL  +   G  ++   +  +I   C  N++++A  L K M    ++P+  TY  L 
Sbjct: 789  VAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALF 848

Query: 315  NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
            N L        A+ +L+ ++  G  PT+  ++ ++ G+C VG    ++   ++      S
Sbjct: 849  NGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGIS 908

Query: 375  PHN----ALLECCCNAGKFFLAKCILEKMADRKIA------------------------- 405
             HN    A++    N+ K   A  +L+ M + +I                          
Sbjct: 909  SHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALEL 968

Query: 406  -----------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                       D  ++N+ I  LC N +I  A++L   M    + P+ + Y   +   C 
Sbjct: 969  RSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCA 1028

Query: 455  LCNYE-DALRVFRQVSAQSLV 474
              NY+ ++ ++ R +  + L+
Sbjct: 1029 -GNYQIESEKLLRDIQDRELM 1048



 Score = 43.1 bits (100), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 14/237 (5%)

Query: 74   NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
            N++  A ++ K ++ Q       DTY  +   L    +  +   + Q +++       + 
Sbjct: 820  NEMKKAFELVKQMN-QFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQ 878

Query: 134  LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD------FV 187
             I+L+        + GAM++   M +    L +   NV + AIV   RG A+       +
Sbjct: 879  YITLINGMCRVGNIKGAMKLQDEMKT----LGISSHNVAMSAIV---RGLANSKKIENAI 931

Query: 188  FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +V   M++  I+P V T   L+ V  +   +  AL+    M       +   + ++I GL
Sbjct: 932  WVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGL 991

Query: 248  IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
             AN  ++ +  +  EM    +    S Y  +I   C  N   E+ +L + ++  +LM
Sbjct: 992  CANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELM 1048


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 250/600 (41%), Gaps = 70/600 (11%)

Query: 180 KRGFADFV---FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
           +RGF+ F      Y+E +++G+V                 + + A+D FR M      P 
Sbjct: 43  ERGFSAFSDRNLSYRERLRSGLV---------------DIKADDAIDLFRDMIHSRPLPT 87

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
              F  +   +    + D  +++  +M   GI   L   + +I   CR  KL  A     
Sbjct: 88  VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            +  L   P+ +T+  LIN LC   R+ +A ++++ M+ +G  P       +V GLC  G
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207

Query: 357 KFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWN 411
           K  E++  ++    Y   P    +  +L   C +G+  LA  +L KM +R I  D   ++
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           I I  LC++  +  A+ L   M +  +  +  TY+  + G C    ++D  ++ R +  +
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            +  + +++S L++   +  K+ EA E+   M   G +  + ++  LI G C    +DKA
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
            ++  L  S G      T+  ++ G  K  R  D L +  +M + G   D   Y  LIQ 
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             E  KL      F  MV   + P+  T   LL GL D  +         K+      LD
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507

Query: 652 SSMYNILINGL---------W--------------------------KEGLTSQASYLLD 676
             +YNI+I+G+         W                          K+G  S+A  L  
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567

Query: 677 LMLGKGWVPDATTHGLLVGSSVG-----------EEIDSRRFAFDSSSFPDSVSDILAEG 725
            M   G  PD  T+ +L+ + +G           EE+    F+ D+S+    V D+L++G
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK-MVIDMLSDG 626


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 228/504 (45%), Gaps = 30/504 (5%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++++M   G++P + T N  +  L +  R + A + F+ M  KG  P+  ++ I++ G  
Sbjct: 356 MFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYA 415

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R  D  ++   M D GI      +  +I    +   ++EA+ +F  M+   + PD +
Sbjct: 416 TEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVV 475

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG---KFDESVNFL 365
           TY  LI+  C   RL DA +    MI IGL P   V+  ++ G C  G   K  E V+ +
Sbjct: 476 TYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM 535

Query: 366 EDKCGYVTSPH----NALLECCCNAGKFFLAKCILE---KMADRKIADCDSWNIPIRWLC 418
             K   +  P+    ++++   CN G+   A  +      + DR      ++N  I   C
Sbjct: 536 MSKG--IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPT--IVTFNSLIDGYC 591

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
              ++ KA+ +L  MV   + PD  TY+  V G CK    +D L +FR++  + +   ++
Sbjct: 592 LVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 651

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +YS +++GL    + + A ++F  M  +G ++   ++ IL+ GLC     D+AI L    
Sbjct: 652 TYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 711

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            +    +  +    ++  L K++R ++   + A +   G   +V  Y ++I ++ ++  +
Sbjct: 712 GAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSV 771

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           ++    F+ M K+G  P                   L++  I  L+   +++ +  Y   
Sbjct: 772 EEADTMFSSMEKSGCAPSSR----------------LLNDIIRMLLQKGDIVKAGYYMSK 815

Query: 659 INGLWKEGLTSQASYLLDLMLGKG 682
           ++G       S  S L+ L   KG
Sbjct: 816 VDGTIISLEASTTSLLMSLFSSKG 839



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/572 (23%), Positives = 240/572 (41%), Gaps = 51/572 (8%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N  L  +   KR       +   M   G VPN  + N +++ L   +R + ALD  +RM 
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254

Query: 230 KKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           K+G  C P+  +F  VI G      V  + +++ EM   G++ ++  Y  I+  LC+   
Sbjct: 255 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARA 314

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +++A  + + M    + PD LTY  +I+    +    ++  +   M   GL P    F  
Sbjct: 315 MDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNS 374

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP--------HNALLECCCNAGKFFLAKCILEKM 399
            +  LC+ G+  ++    +    Y+T+         ++ LL      G+F     +   M
Sbjct: 375 FMSSLCKHGRSKDAEEIFQ----YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
           AD+ I A+C  +NI I    +   + +A  +   M    V PD  TYS  +   C++   
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490

Query: 459 EDALRVFRQ--------------------------VSAQSLVLDSIS----------YSK 482
            DA+  F Q                          V A+ LV + +S          +S 
Sbjct: 491 ADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSS 550

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++  LC   ++ +A +VF  +   G   +  +FN LI G C++ K++KA  +     S G
Sbjct: 551 IIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 610

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY  ++ G  K  +  D L++  +ML +        Y I++  +    +     
Sbjct: 611 IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F+ M+ +G   D +T   LL GL          +  +KL +     D ++ N +IN L
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +K     +A+ L   +   G VP+ +T+G+++
Sbjct: 731 YKVRRREEANDLFAAISTSGLVPNVSTYGVMI 762



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/469 (21%), Positives = 195/469 (41%), Gaps = 44/469 (9%)

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
           L +  Y  ++   CR  + +     F  +    L    +     + CLC   R D+A D+
Sbjct: 154 LSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDV 213

Query: 330 -LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP----HNALLEC 382
            L  M  +G  P    +  +++ LC   +  E+++ ++   K G   SP     N ++  
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
               G+   A  ++ +M  + +  D  ++N  +  LC+   + KA  +L +MV   V PD
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TY+A + G     +++++ ++FR+++++ L+   ++++  +  LC+  +  +A E+F 
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M+  G      S++IL++G     +      L       G       +  ++    K  
Sbjct: 394 YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRG 453

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
              + ++V  +M  +G   DV  Y  LI +     +L D    F+ M+  GL P+     
Sbjct: 454 MMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYH 513

Query: 622 SLLHGLADGSQL--------HLVSSGINK------------LVSDSEVLDSS-------- 653
           SL+HG      L         ++S GI +            L ++  V+D+         
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH 573

Query: 654 --------MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                    +N LI+G    G   +A  +LD M+  G  PD  T+  LV
Sbjct: 574 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 110/229 (48%), Gaps = 1/229 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           ++  A  VL  M S G +  V  +N ++    +  +   D + +++EM+   + P   T 
Sbjct: 595 KMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK-IDDGLILFREMLHKKVKPTTVTY 653

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + +L+ LF   R  +A   F  M   G   +  T++I++KGL  N   D+++++  ++  
Sbjct: 654 SIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 713

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           +  + +++    +I  L +  + EEA  LF  +    L+P+  TY  +I+ L +   +++
Sbjct: 714 MDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEE 773

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           A+ +   M   G  P+  +  DI+R L + G   ++  ++    G + S
Sbjct: 774 ADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIIS 822


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 140/608 (23%), Positives = 273/608 (44%), Gaps = 37/608 (6%)

Query: 119 CQNMVKERYPNVRE-ALISLVFSFVNHYRVNGAMRVLVN-MNSGGFKLSV---------- 166
            Q  + E +P+     LIS+V S ++H++   A  +LV+ + +    LS+          
Sbjct: 65  AQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLH 124

Query: 167 -------DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE---TN 216
                   +F++ L A + E +       ++++M++  + PN+ T N LL  L     + 
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQ-IFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQLELSFY 275
            I SA + F  M K G   N +TF +++ G     +++D++ +L  M  +  +  +   Y
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             I+  + ++ +L +   L   M+   L+P+ +TY  L+   C+   L +A  I+E M  
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
             + P    +  ++ GLC  G   E +  ++        P    +N L++ C   G    
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEE----IRKAYELLGRMVVSSVVPDCATYS 446
           A+ ++E+M +  + A+  + NI ++WLC+ E+     RK  EL+    +    PD  TY 
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD---MHGFSPDIVTYH 420

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             +    K+ +   AL + R++  + + +++I+ + +++ LC+  K+ EA  +     K 
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G  +   ++  LI G     KV+KA+ +         + T ST+  ++ GL    + +  
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           +    ++   G   D   +  +I    ++ +++    F+N  +K    PD  T   LL+G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L          +  N L+ + EV D+  YN +I+   K+    +A  LL  M  KG  PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659

Query: 687 ATTHGLLV 694
             T+   +
Sbjct: 660 RFTYNSFI 667



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 230/512 (44%), Gaps = 21/512 (4%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI---ANSRVDDS 256
           P+    +  L       +   AL  F++M +    PN  T   ++ GL+   ++  +  +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELIN 315
             +  +M  +G+ L +  +  ++   C E KLE+A+ +  +M+    + PD +TY  ++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---------VNFLE 366
            + +  RL D  ++L DM   GL P    + ++V G C++G   E+          N L 
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           D C Y     N L+   CNAG       +++ M   K+  D  ++N  I    E     +
Sbjct: 309 DLCTY-----NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYSKLV 484
           A +L+ +M    V  +  T++  +   CK    E   R  ++ V       D ++Y  L+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +   +V  ++ A+E+   M + G  +++ + N ++  LC  RK+D+A  L + A+  G  
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  +++G  + ++ +  L +  +M        V  +  LI  +    K +     
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ + ++GL+PD  T  S++ G     ++       N+ +  S   D+   NIL+NGL K
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           EG+T +A    + ++ +  V D  T+  ++ +
Sbjct: 604 EGMTEKALNFFNTLIEEREV-DTVTYNTMISA 634



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 173/374 (46%), Gaps = 29/374 (7%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYL 208
           A +++  M + G K +    N+ L  + +E++  A      KE+V   G  P++ T + L
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA-VTRKVKELVDMHGFSPDIVTYHTL 422

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++   +   +  AL+  R M +KG   N+ T   ++  L    ++D++ ++L      G 
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            ++   Y  +I    RE K+E+A+ ++  M+ + + P   T+  LI  LC + + + A +
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCC 384
             +++   GL P D  F  I+ G C+ G+ +++  F  +   +   P     N LL   C
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             G    A      + + +  D  ++N  I   C+++++++AY+LL  M    + PD  T
Sbjct: 603 KEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662

Query: 445 YSAFV---LGKCKLCNYEDALRVFR----------QV----------SAQSLVLDSISYS 481
           Y++F+   +   KL   ++ L+ F           QV          S + L  ++I+YS
Sbjct: 663 YNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYS 722

Query: 482 KLVEGLCQVEKITE 495
            +++ LC   ++ E
Sbjct: 723 DVIDELCSRGRLKE 736



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/459 (21%), Positives = 204/459 (44%), Gaps = 16/459 (3%)

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE---NLRLDDANDILEDMIVIGLTP 340
            E K   A+++F+ M  L L P+ LT   L+  L     +  +  A ++ +DM+ IG++ 
Sbjct: 143 HEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSL 202

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCG-YVTSP----HNALLECCCNAGKFF-LAKC 394
               F  +V G C  GK ++++  LE     +  +P    +N +L+     G+   L + 
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +L+   +  + +  ++N  +   C+   +++A++++  M  ++V+PD  TY+  + G C 
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             +  + L +   + +  L  D ++Y+ L++G  ++    EA ++   M  +G   +  +
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382

Query: 515 FNILIYGLCVMRKVDKAIR-LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            NI +  LC   K +   R ++ L    G S    TY  ++   +K+      L ++ +M
Sbjct: 383 HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G  ++      ++ ++ ++ KL +     N   K G + D  T  +L+ G     ++
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKV 502

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  +++         S +N LI GL   G T  A    D +   G +PD +T   +
Sbjct: 503 EKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562

Query: 694 VGSSVGEEIDSRRFAFDSSSF-----PDSVS-DILAEGL 726
           +     E    + F F + S      PD+ + +IL  GL
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 247/543 (45%), Gaps = 65/543 (11%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA------DFVFV 189
           +L+   V+  + + A+R+   + +G F  +   +NV++       RGF         V V
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLI-------RGFCKGGQMHQAVSV 54

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           + +M  +G++PN  T+N LL  L E  ++ SAL  FR M      P S +  I+++G   
Sbjct: 55  FSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM 114

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK----LEEAIRLFKMMRALDLMP 305
             RV D+++ L +M      +    Y  ++  LC ENK    LE+A+  FK M+A  + P
Sbjct: 115 AGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEP 174

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D  +Y  L++ L ++ R+ +A+ +   M       T +V +D   G C++G+  E+ + +
Sbjct: 175 DLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMD---GYCKIGQTYEAQSLM 231

Query: 366 ED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKM---------------------- 399
           ++  K GY  +   ++ ++ C C   K   A  +  KM                      
Sbjct: 232 KEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 291

Query: 400 ----------ADRKIADCD----SWNIPIRWLCENEE-IRKAYELLGRMVVSSVVPDCAT 444
                     A+ +   C     ++N  I  LC+    +  A +L  ++  + + P   T
Sbjct: 292 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 351

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y++ + G C      +A++ F ++  +    + I+YS L++GLC+V ++ EA +    M 
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCKVRRMKEAAKTLEDMK 410

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G + +  ++  LI G C   ++  A+        +G +  T  +  ++ GL K +RA 
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D L +L  M  EGC  DV  Y  LI  +   N+++D    F+ M  A   P+  T   L+
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA---PNVTTFNFLI 527

Query: 625 HGL 627
            GL
Sbjct: 528 RGL 530



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/534 (23%), Positives = 240/534 (44%), Gaps = 17/534 (3%)

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N LL  L    + + AL  F+ +      PN+ T+ ++I+G     ++  +VS+  +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G+    S    ++  LC   ++  A++LF+ M+A   +P   ++  L+       R+ D
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLC----EVGKFDESVNFLEDKCGYVTSP----HN 377
           A   L+DM     +     +  +++GLC       + ++++ F ++       P    ++
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
            LL    ++G+   A  +   M      D  ++N+ +   C+  +  +A  L+  ++ + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS--PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P+  TYS  +   CKL   E+A  VF ++   + V ++++++ L+ G C+   + +A+
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAI 298

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMR-KVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           ++F  M K GC  +  ++N LI  LC  R  V  A+ L +    +G + T  TY  ++ G
Sbjct: 299 KLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQG 358

Query: 557 LVKLQRAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
               +R  + +    +M  EG CA +V  Y ILI  + +  ++K+ A     M   G  P
Sbjct: 359 FCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
              T   L++G     +L        K+       ++ ++N LI+GL K    +    LL
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476

Query: 676 DLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSFPDSVS--DILAEGL 726
             M  +G  PD  T+  L+ G      ++  +  FD  +   +V+  + L  GL
Sbjct: 477 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNVTTFNFLIRGL 530



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 251/592 (42%), Gaps = 99/592 (16%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT------------------------- 204
           N +L  +V  ++     + ++KE++     PN  T                         
Sbjct: 1   NALLSGLVSARK-HDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 205 ----------LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
                     +N LL  L E  ++ SAL  FR M      P S +  I+++G     RV 
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENK----LEEAIRLFKMMRALDLMPDELTY 310
           D+++ L +M      +    Y  ++  LC ENK    LE+A+  FK M+A  + PD  +Y
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--K 368
             L++ L ++ R+ +A+ +   M       T +V +D   G C++G+  E+ + +++  K
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMD---GYCKIGQTYEAQSLMKEILK 236

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            GY   P                              +  +++I I   C+ +++ +A+E
Sbjct: 237 AGY--EP------------------------------NVFTYSIIINCYCKLDKVEEAWE 264

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +  +M+ S+ VP+  T++  + G CK    EDA+++F ++         ++Y+ L++ LC
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 324

Query: 489 QVE-KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           +    +  AV++F  +   G + +  ++N LI G C  R++ +A++          +   
Sbjct: 325 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFD-EMEGKCAPNV 383

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY+ ++ GL K++R K+    L  M   G    V  Y  LI    +  +LK   LFF  
Sbjct: 384 ITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEK 443

Query: 608 MVKAGLVPDRETMLSLLHGLA------DGSQL--HLVSSGINKLVSDSEVLDSSMYNILI 659
           M  AG  P+     +L+ GL       DG +L  H+ + G           D   YN LI
Sbjct: 444 MKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKP--------DVITYNCLI 495

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFD 710
           +GL        A  L D   G    P+ TT   L+ G    ++++  R   D
Sbjct: 496 SGLCSANRVEDAQRLFD---GMACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 208/442 (47%), Gaps = 17/442 (3%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG---FADFVFVYKEM 193
           L+  F    RV  A+  L +M      ++   +N+VL  +  E +        +  +KEM
Sbjct: 108 LLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM 167

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
             +G+ P++++ + LL  L ++ R+  A   F  M    C P+  T+ +++ G     + 
Sbjct: 168 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 224

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            ++ S++ E+   G +  +  Y+ II   C+ +K+EEA  +F  M   + +P+ +T+  L
Sbjct: 225 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 284

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV-GKFDESVNFLEDKCGYV 372
           I   C+   L+DA  +  +M  IG   T   +  ++  LC+  G    +V+      G  
Sbjct: 285 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 344

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            +P    +N+L++  C+A +   A    ++M  +   +  +++I I  LC+   +++A +
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAK 404

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
            L  M      P   TY   + G CK    + AL  F ++       +++ ++ L++GLC
Sbjct: 405 TLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLC 464

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           + E+  + + + C M   GC     ++N LI GLC   +V+ A RL         +   +
Sbjct: 465 KAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD---GMACAPNVT 521

Query: 549 TYTKIMLGLV---KLQRAKDLL 567
           T+  ++ GL    K++ A+++L
Sbjct: 522 TFNFLIRGLCAQKKVEEARNIL 543


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 249/560 (44%), Gaps = 27/560 (4%)

Query: 117 GLCQ---NMVKERYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           G C+   NM+     N   +L  SLV S+ N      A ++L  M + G      V+N+ 
Sbjct: 94  GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 153

Query: 173 LGAIV-EEKRGFADFV----FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +G+I  +EK    D +     +Y EM+ A  V N   +      L    + + A    + 
Sbjct: 154 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 213

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KG  P++ T+  VI  L   ++V+ +  +  EM  +G+  ++  YT +I   C+   
Sbjct: 214 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 273

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E+A  LF+ MR++   P  +TY  LI+   +  ++  ANDI   M+  G  P D  +  
Sbjct: 274 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 333

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           +V GLC+ G   ++        G   S  +     C    +  LA  ++           
Sbjct: 334 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC--EDRHTLAPNVV----------- 380

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   +  LC+  ++  A+ELL  M+ S   P+   Y A + G CK    + A  VF Q
Sbjct: 381 -TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 439

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++    +    +Y+ L++ + +  ++  A++V   M K+ C+ +  ++  +I GLC + +
Sbjct: 440 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
            +KA++L SL    G S    TYT ++ GL K  +    L +  QM  +GC+ +   Y +
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 559

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI-NKLVSD 646
           LI  +     L    L    M +       +     + G    S+  + S GI  ++ S 
Sbjct: 560 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF---SKSFIASLGILEEMESY 616

Query: 647 SEVLDSSMYNILINGLWKEG 666
             V  + +Y +LI+   K G
Sbjct: 617 GTVPIAPVYGMLIDCFSKAG 636



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 244/585 (41%), Gaps = 48/585 (8%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+  F+   ++    R++  M + G   +  +FN ++ +   EK    D+ 
Sbjct: 75  PNVV-TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK----DYA 129

Query: 188 FVYK---EMVKAGIVPNVDTLNYLL------EVLFETNRIESALDQFRRMHKKGCCPNSR 238
           + YK    M   G  P     N  +      E L   + ++ A   +  M    C  N  
Sbjct: 130 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 189

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
                 + L    + D +  ++ EM   G   + S Y+ +I  LC   K+E+A  LF+ M
Sbjct: 190 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 249

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           + + + PD  TY  LI+  C+   ++ A  + E+M  +G +PT   +  ++    +  + 
Sbjct: 250 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 309

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
            ++ +           P    + AL++  C AG    A  +  K+    I   DS +   
Sbjct: 310 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL----IGTSDSADSDF 365

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            + CE+                ++ P+  TY A V G CK    + A  +   + +    
Sbjct: 366 YFPCEDRH--------------TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 411

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + I Y  L++G C+  KI  A EVF  M+K G   S  ++  LI  +    ++D A+++
Sbjct: 412 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 471

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            S       +    TYT ++ GL ++  ++  L +L+ M  +GC+ +V  Y  LI  + +
Sbjct: 472 LSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK 531

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLH-----GLADGSQLHLVSSGINKLVSDSEV 649
             K+      F  M + G  P+  T   L++     GL D ++L L   G  K     + 
Sbjct: 532 AGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL---GEMKQTYWPKY 588

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L    Y   I G  K  + S    +L+ M   G VP A  +G+L+
Sbjct: 589 LQG--YRCAIQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLI 629



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/529 (22%), Positives = 205/529 (38%), Gaps = 65/529 (12%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M + G C +  T       L    R  D++ ++ E  D   +L+    T +I  L   + 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMI-EREDF--KLDTVLCTHMISGLMEASY 57

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            +EA+     MR    +P+ +TY  L++   +  +L     I+  M+  G  P   +F  
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 348 IVRGLCEVGKFDESVN-------------------FLEDKCGYVTSPHNALLE------- 381
           +V   C    +  +                     F+   CG    P   LL+       
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 382 -------------------CCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENE 421
                              C C  GKF  A + I E M    + D  +++  I +LC   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ KA+ L   M +  V PD  TY+  +   CK    E A  +F ++ +       ++Y+
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+    + +++ +A ++F  M   GC  +  ++  L+ GLC    + KA  + +    +
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 542 GTSYTTS----------------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             S  +                 TY  ++ GL K  +      +L  ML  GC  +   Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    +  K+      F  M K G +P   T  SL+  +    +L L    +++++ 
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           DS   +   Y  +I+GL + G + +A  LL LM  KG  P+  T+  L+
Sbjct: 478 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 526



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 122/537 (22%), Positives = 230/537 (42%), Gaps = 29/537 (5%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-V 123
           +  R L        A ++ K + ++K F     TY K+I  L  A  VE+   L Q M +
Sbjct: 193 NFARCLCGVGKFDKAFQLIKEM-MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A  +   M S G   +V  +  ++ A ++ K+  
Sbjct: 252 VGVTPDVYTYTI-LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-V 309

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM--------------- 228
                ++  MV AG  PN  T   L++ L +   I  A + + ++               
Sbjct: 310 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 369

Query: 229 -HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
             +    PN  T+  ++ GL    +VD +  +L  M   G +     Y  +I   C+  K
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A  +F  M     +P   TY  LI+ + ++ RLD A  +L  M+    TP    +  
Sbjct: 430 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 489

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC +G+ ++++  L    E  C      + AL++    AGK  L+  +  +M+ + 
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + +  ++ + I  LC    + KA  LLG M  +        Y   + G  K  ++  +L
Sbjct: 550 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASL 607

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS--FNILIY 520
            +  ++ +   V  +  Y  L++   +  ++  A+E+   M +   S+ + +  +  LI 
Sbjct: 608 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 667

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            LC+  +V++A RL S     G     S +  ++ GLV++++  + L +   +  EG
Sbjct: 668 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 100/259 (38%), Gaps = 9/259 (3%)

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           T   F    CK   + DAL +   +  +   LD++  + ++ GL +     EA+     M
Sbjct: 12  TVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
             N C  +  ++  L+ G    +++    R+ ++  + G +   S +  ++      +  
Sbjct: 69  RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF------FNVMVKAGLVPDR 617
                +L +M   GC      Y I I S+  Q KL    L       +  M+ A  V ++
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 188

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
             + +    L    +       I +++    V D+S Y+ +I  L       +A  L   
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248

Query: 678 MLGKGWVPDATTHGLLVGS 696
           M   G  PD  T+ +L+ S
Sbjct: 249 MKMVGVTPDVYTYTILIDS 267


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 215/471 (45%), Gaps = 6/471 (1%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G +P+V   N +L  L +  R+E AL  F  M K+   PN  T+ I+I  L    +++ +
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAA 178

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + I  +M   G+   +     +I  LC+  KLEEA  +F+ M      P+ +T+  LI+ 
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           L +  R+DDA  + E M+  G  P   V+  ++R   + G+ ++     ++      SP 
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298

Query: 377 ----NALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
               N  ++C   AG+    + +  ++ A   I D  S++I I  L +     + YEL  
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M     V D   Y+A + G CK      A ++  ++  +      ++Y  +++GL +++
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 418

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++ EA  +F     NG  L+   ++ LI G   + ++D+A  +       G +    T+ 
Sbjct: 419 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 478

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++  LVK +   + L+    M    C  +   Y ILI  +    K     +F+  M K 
Sbjct: 479 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 538

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
           GL P+  T  +++ GLA    +   S   ++  ++  + DS+ YN +I GL
Sbjct: 539 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 589



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 138/550 (25%), Positives = 247/550 (44%), Gaps = 11/550 (2%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERY 127
           VL   N L  A+++F+ +  Q R    A  Y  MI+  G AG  +E  GL +    K   
Sbjct: 64  VLCKANRLDEAVELFEQLE-QNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 122

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V  A   ++       RV  A+R+   M       +V  +N+++  +  E +  A   
Sbjct: 123 PSVI-AYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALE 180

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +  +M +AG+ PNV T+N +++ L +  ++E A   F  M  K C PN+ TF  +I GL
Sbjct: 181 -IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 239

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               RVDD+ S+  +M D G       YT +I    +  + E+  +++K M      PD 
Sbjct: 240 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 299

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-- 365
                 ++C+ +    +    +  ++   G  P    +  ++ GL + G  +E+      
Sbjct: 300 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 359

Query: 366 --EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEE 422
             E  C   T  +NA+++  C +GK   A  +LE+M  +       ++   I  L + + 
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 419

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +AY L      + +  +   YS+ + G  K+   ++A  +  ++  + L  +  +++ 
Sbjct: 420 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 479

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++ L + E+I EA+  F  M    C  +  +++ILI GLC +RK +KA          G
Sbjct: 480 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 539

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC- 601
               T TYT ++ GL K     +   + ++    G   D  +Y  +I+ +S  NK  D  
Sbjct: 540 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 599

Query: 602 ALFFNVMVKA 611
           ALF    +K 
Sbjct: 600 ALFEETRLKG 609



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/536 (23%), Positives = 238/536 (44%), Gaps = 43/536 (8%)

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
           VL + NR++ A++ F ++ +    P +  +  +I G  +  + D++  +L      G   
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
            +  Y CI+  L ++ ++EEA+R+F+ M+  D +P+  TY  LI+ LC   +L+ A +I 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIR 182

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNA 386
           +DM   GL P       ++  LC+  K +E+ +  E     V +P+    ++L++     
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 387 GKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G+   A  + EKM D   +     +   IR   +       +++   MV +   PD    
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           + ++    K    E    +FR+++A   + D+ SYS L+ GL +     E  E+F  M +
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            GC L + ++N +I G C   KV+KA +L       G   T  TY  ++ GL K+ R  +
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
             ++  +    G  L+V  Y  LI    +  ++ +  L    +++ GL P+  T   LL 
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482

Query: 626 GLADGSQLH----------------------LVSSGINKLVSDSEVL------------- 650
            L    +++                      ++ +G+ ++   ++               
Sbjct: 483 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 542

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDS 704
           ++  Y  +I+GL K G   +AS L       G +PD+ ++  ++   SS  + +D+
Sbjct: 543 NTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 598



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 5/339 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +YKEMV  G  P++  +N  ++ +F+    E     FR ++  G  P++R++ I+I GL+
Sbjct: 286 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 345

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                +++  +   M + G  L+   Y  +I   C+  K+ +A +L + M+     P  +
Sbjct: 346 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 405

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  +I+ L +  RLD+A  + E+    G+     V+  ++ G  +VG+ DE+   +E+ 
Sbjct: 406 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 465

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEI 423
                +P+    N LL+    A +   A    + M D K      +++I I  LC   + 
Sbjct: 466 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 525

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA+     M    + P+  TY+  + G  K  N  +A  +F +  A   + DS SY+ +
Sbjct: 526 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAM 585

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           +EGL    K  +A  +F      GC++ + +  +L+  L
Sbjct: 586 IEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 624



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 191/480 (39%), Gaps = 54/480 (11%)

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELIN----------CLCENLRLDDANDILEDM 333
           +  KL EA  + + MR     P    Y  LI            LC+  RLD+A ++ E +
Sbjct: 22  KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
                 P    +  ++ G    GKFDE+   LE +    + P    +N +L C     + 
Sbjct: 82  EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A  I E+M    + +  ++NI I  LC   ++  A E+   M  + + P+  T +  +
Sbjct: 142 EEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMI 201

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV---------- 499
              CK    E+A  +F  +  +    +++++S L++GL +  ++ +A  +          
Sbjct: 202 DRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV 261

Query: 500 -------------FCC------------MSKNGCSLSSSSFNILIYGLCVMR--KVDKAI 532
                        F C            M   GCS   +  N   Y  CV +  + +K  
Sbjct: 262 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT--YMDCVFKAGETEKGR 319

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L     + G      +Y+ ++ GLVK   A +   +   M  +GC LD  AY  +I   
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 379

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +  K+         M   G  P   T  S++ GLA   +L        +  S+   L+ 
Sbjct: 380 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 439

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV-GEEIDSRRFAFDS 711
            +Y+ LI+G  K G   +A  +++ ++ KG  P+  T   L+ + V  EEI+     F S
Sbjct: 440 VVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQS 499



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 9/197 (4%)

Query: 99  YCKMILKLGLAGNVEE----MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           Y  +I   G  G ++E    ME L Q   K   PNV      L+ + V    +N A+   
Sbjct: 442 YSSLIDGFGKVGRIDEAYLIMEELMQ---KGLTPNVY-TWNCLLDALVKAEEINEALICF 497

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
            +M       +   +++++  +   ++    FVF ++EM K G+ PN  T   ++  L +
Sbjct: 498 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVF-WQEMQKLGLKPNTITYTTMISGLAK 556

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              I  A   F R    G  P+S ++  +I+GL + ++  D+ ++  E    G  +    
Sbjct: 557 AGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKT 616

Query: 275 YTCIIPMLCRENKLEEA 291
              ++  L +   LE+A
Sbjct: 617 CVVLLDALHKAECLEQA 633


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 225/498 (45%), Gaps = 33/498 (6%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P V T   +++   + N+++ AL  F +M ++   PN RT+ +V+ GL        +  +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 260 LGEMFD-LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDELTYEELINCL 317
           L EM D   +  +L  Y+ +I   C++ +++ A  + + M   D + PD +TY  +++ L
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C + ++D A +++ +M + G+ P    F  ++ G C   K DE++   ++          
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKE---------- 173

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                            IL   + +   D  ++   I   C++  + KA ++LG M    
Sbjct: 174 -----------------ILTSSSWK--PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
            VP+  TYS+ + G CK  + + AL +FR+++++  V + ++Y+ L+ GLC   K+  A 
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +   M+   C   + S+N L+ G C + ++++A +L     +        TYT ++ G 
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334

Query: 558 VKLQRAKDLLVVLAQM-LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
               R ++   +L  M    G   DV  Y I++   S   +  + A F   M+   + P+
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  SL+ GL    ++      +  +V+         +N +I  L + G   +A  LL 
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454

Query: 677 LMLGKGWVPDATTHGLLV 694
            M   G  P   T+  L+
Sbjct: 455 AMAAHGLEPGMVTYTTLL 472



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 212/471 (45%), Gaps = 41/471 (8%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C P   T+ I+I G    +++  +++   +M +     E + Y  ++  LC+     +A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERT-YNVVVNGLCKARLTSKAY 61

Query: 293 RLFKMMR-ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI-GLTPTDDVFVDIVR 350
            + K MR    + PD +TY  +IN  C+   +D A +IL +M+   G+ P    +  +V 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIAD 406
           GLC  GK D +   + +       P     +AL+   CNA               RK+  
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA---------------RKV-- 164

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
                         +E  K Y+ +  +  SS  PD  TY+A + G CK  N E A+++  
Sbjct: 165 --------------DEALKLYKEI--LTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG 208

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +  +  V + ++YS L+ GLC+   + +A+++F  M+  GC  +  ++  LI+GLC   
Sbjct: 209 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 268

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           KVD A  L     ++     T +Y  ++ G  +L R ++   +  +M  + C  D   Y 
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328

Query: 587 ILIQSMSEQNKLKDCALFF-NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            L++     ++L++      N+   AG+ PD  T   ++ G +   +    +  I ++++
Sbjct: 329 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            +   ++  Y+ LI+GL K G    A  +L  M+ K   P   T   ++G+
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 116/504 (23%), Positives = 217/504 (43%), Gaps = 52/504 (10%)

Query: 189 VYKEMV-KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
           + +EMV + GI P+V T   +++ L    +++ A +  R M  KG  P+  TF  +I G 
Sbjct: 99  ILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 158

Query: 248 IANSRVDDSVSILGEMF-DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
               +VD+++ +  E+      + ++  YT +I   C+   LE+A+++  +M     +P+
Sbjct: 159 CNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPN 218

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  L++ LC+   LD A D+   M   G  P    +  ++ GLC   K D +   ++
Sbjct: 219 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 278

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
           +       P    +NALL+  C  G+                                  
Sbjct: 279 EMTATCCPPDTVSYNALLDGYCRLGR---------------------------------- 304

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYS 481
           I +A +L   M   S +PD  TY+  V G C     E+A  +   + +A  +  D ++YS
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            +V G  + ++  EA E    M     + ++ +++ LI GLC   +VD A+ +     + 
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
               +  T+  ++  L +L    +   +L  M   G    +  Y  L++  S   +++  
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484

Query: 602 ALFFNVM--------VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS-DSEVLDS 652
              F VM          A LVP+ +   +L+ GL    ++    + + +L S + E  + 
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 543

Query: 653 SMYNILINGLWKEGLTSQASYLLD 676
               I ++GL + G T +A  L++
Sbjct: 544 DCLAI-VDGLLRAGRTEEAGKLIN 566



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 179/416 (43%), Gaps = 16/416 (3%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNV 130
           N   +  ALK++K +     ++    TY  +I     +GN+E+   +   M   +  PNV
Sbjct: 160 NARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNV 219

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
                SL+        ++ A+ +   M S G   +V  +  ++  +    +  A  + + 
Sbjct: 220 -VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM- 277

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            EM      P+  + N LL+      RIE A   F+ M  K C P+  T+  +++G    
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNA 337

Query: 251 SRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           SR++++  +L  M    GI  ++  Y+ ++    R  +  EA    + M A ++ P+ +T
Sbjct: 338 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 397

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  LI+ LC+  R+D A ++L++M+   + P+   F  ++  LC +G  DE+   L    
Sbjct: 398 YSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 457

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN-IP-------IRWL 417
            +   P    +  LLE     G+  +A  + E M  +      + N +P       IR L
Sbjct: 458 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGL 517

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           C+  EI KA  ++  +      P      A V G  +    E+A ++   +S   L
Sbjct: 518 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 239/539 (44%), Gaps = 36/539 (6%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+  SV  +N VL A+ +     A        M++ G+ PNV T N L+  L    R+E 
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFL--SSMLRHGVAPNVYTYNILVRALCARGRLEE 170

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCII 279
           A+     M   GC PN+ T+  ++        +D +  ++  M + G  +  L  +  ++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC+  ++E A ++F  M    L PD ++Y  L++  C+   L ++  +  +M   GL 
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAK 393
           P    F  ++   C+ G  +++V  +        +   VT    AL++  C  G  FL  
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT--FTALIDGFCKKG--FLDD 346

Query: 394 CILEKMADRKIADCDS---WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            +L     RK     S   +N  I   C+   +  A EL+  M    V PD  TYS  + 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK+ N + A ++ +++  + ++ D+I+YS L+ GLC+ +++ +A E+F  M + G   
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              ++  LI G C    V+KA+ L       G      TY+ ++ GL K  R K+   +L
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            ++  E    D   Y  L+   S+                     + +++++LL G    
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKA--------------------EFKSVVALLKGFCMK 566

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             +         ++  +  LD S+Y+ILI+G  + G   +A      ML  G+ P++T+
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 219/525 (41%), Gaps = 59/525 (11%)

Query: 57  LRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           LRH ++P+      L+R L     L  A+ +   +         A TY  ++     AG 
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNAVTYNTLVAAFCRAGE 202

Query: 112 VEEMEGLCQNMVKERYPNVREALI---SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           ++  E +   M +E   N +  L+   S+V       R+ GA +V   M   G    V  
Sbjct: 203 LDGAERVVSLMREE--GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 260

Query: 169 FNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +N +L      K G   + + V+ EM + G+VP+V T   L+    +   +E A+    +
Sbjct: 261 YNTLLSGYC--KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M ++G   N  TF  +I G      +DD++  + EM   GIQ  +  Y  +I   C+  +
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A  L + M A  + PD +TY  +I+  C+   LD A  + + M+  G+ P    +  
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           ++RGLCE  + +++    E+           +L+      +F                  
Sbjct: 439 LIRGLCEEKRLNDACELFEN-----------MLQLGVQPDEF------------------ 469

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   I   C+   + KA  L   M+   V+PD  TYS  + G  K    ++A R+  +
Sbjct: 470 -TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 468 VSAQSLVLDSISYS---------------KLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           +  +  V D+I Y                 L++G C    + EA +V+  M      L  
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           S ++ILI+G C    V KA+        SG S  +++   ++ GL
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/522 (22%), Positives = 217/522 (41%), Gaps = 28/522 (5%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+   +  V+  L +++ +  +   L  M   G+   +  Y  ++  LC   +LEEA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVR 350
           + +   MR     P+ +TY  L+   C    LD A  ++  M   G   P    F  +V 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IA 405
           GLC+ G+ + +    ++      +P    +N LL   C  G    +  +  +M  R  + 
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++   I   C+   + +A  L+ +M    +  +  T++A + G CK    +DAL   
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++    +    + Y+ L+ G C++ ++  A E+   M          +++ +I G C +
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             +D A +L       G      TY+ ++ GL + +R  D   +   ML  G   D   Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    ++  ++      + M++ G++PD  T   L++GL+  ++       + KL  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 646 DSEVLDSSMYNIL---------------INGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           +  V D+  Y+ L               + G   +GL  +A  +   ML + W  D + +
Sbjct: 532 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 591

Query: 691 GLLV-----GSSVGEEIDSRRFAFDSSSFPDSVSDI-LAEGL 726
            +L+     G +V + +   +    S   P+S S I L  GL
Sbjct: 592 SILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 109/261 (41%), Gaps = 16/261 (6%)

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG 149
           KR +    TY  +I      GN++    L Q M+K+          SL+       R+N 
Sbjct: 392 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLND 451

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  +  NM   G +     +  ++    +E       + ++ EM++ G++P+V T + L+
Sbjct: 452 ACELFENMLQLGVQPDEFTYTTLIDGHCKEG-NVEKALSLHDEMIRKGVLPDVVTYSVLI 510

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV---------------IKGLIANSRVD 254
             L ++ R + A     +++ +   P++  ++ +               +KG      + 
Sbjct: 511 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMK 570

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++  +   M D   +L+ S Y+ +I   CR   + +A+   K M      P+  +   L+
Sbjct: 571 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630

Query: 315 NCLCENLRLDDANDILEDMIV 335
             L E   + +A++ ++D++ 
Sbjct: 631 RGLFEEGMVVEADNAIQDLLT 651


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 266/603 (44%), Gaps = 62/603 (10%)

Query: 36  SSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHT 95
           S+++ ++ +HQ+      IQS     S  HLI+ L    +LS +L     +S+ K+    
Sbjct: 49  STDSPLVITHQS--LLDSIQS-----SQWHLIKHL--APNLSPSLISATLLSLHKK---- 95

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL- 154
           +D   + +  +G  G   + + L   +V  R P+ +  L  L  +  +  RV G   V  
Sbjct: 96  SDLALQFVTHIGFKGLDIKTKCLAVAVV-SRSPSPKSTLHLLKQTIES--RVAGVKDVFH 152

Query: 155 ---VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
              +  +  G K S+ VF++++ A  E KRG  D    +  M + G+VP ++T N +L +
Sbjct: 153 ELAITRDRLGTKSSI-VFDMLIRACCELKRG-DDAFECFDMMKEKGVVPKIETFNAMLSL 210

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             + N+ E+    +  M +        TF I+I  L    ++  +   +G M +LG++  
Sbjct: 211 FLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPN 270

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  Y  +I   C   ++E A  +  +M+   + PD  TY  LI+ +C+  +L++A+ ILE
Sbjct: 271 VVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILE 330

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
            M  IGL PT   +  ++ G C  G   ++  + ++       P    +N L+      G
Sbjct: 331 KMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEG 390

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           K   A  +++ M D  I  D  ++NI I   C     +KA+ L   M+   + P   TY+
Sbjct: 391 KMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYT 450

Query: 447 -----------------------------------AFVLGKCKLCNYEDALRVFRQVSAQ 471
                                              A + G C   N + A  + +++  +
Sbjct: 451 SLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKR 510

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
           ++V D ++Y+ L++G C+  K+ EA E+   M + G      S+N LI G      ++ A
Sbjct: 511 NIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDA 570

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             +R    S G + T  TY  ++ GL K Q+      +L +M+ +G   D   Y  LI+ 
Sbjct: 571 FTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630

Query: 592 MSE 594
           + +
Sbjct: 631 IGK 633



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 217/496 (43%), Gaps = 41/496 (8%)

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           E  R + A + F  M +KG  P   TF  ++   +  ++ +    +  EMF L I+  + 
Sbjct: 178 ELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVY 237

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  +I +LC+E KL++A      M  L + P+ +TY  +I+  C   R++ A  +L+ M
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCNAGKF 389
              G+ P    +  ++ G+C+ GK +E+   LE   + G + +   +N L++  CN G  
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A    ++M  R I     ++N+ I  L    ++ +A  ++  M  S +VPD  TY+  
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G C+  N + A  +  ++ ++ +    ++Y+ L+  L +  ++  A ++F  + + G 
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           S     FN LI G C    +D+A  L              TY  +M G  +  + ++   
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L +M   G   D  +Y  LI   S++  + D     + M+  G  P   T+L+      
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNP---TLLT------ 588

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
                                     YN LI GL K      A  LL  M+ KG  PD +
Sbjct: 589 --------------------------YNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622

Query: 689 THGLLVGSSVGEEIDS 704
           T+  L+   +G+  DS
Sbjct: 623 TYFSLI-EGIGKVDDS 637



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 198/445 (44%), Gaps = 43/445 (9%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G    ++ FN +L   ++  +    +V +Y EM +  I   V T N ++ VL +  
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWV-LYAEMFRLKIKSTVYTFNIMINVLCKEG 250

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A D    M   G  PN  T+  VI G  +  RV+ +  +L  M + G++ +   Y 
Sbjct: 251 KLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYG 310

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE----------------- 319
            +I  +C+  KLEEA  + + M+ + L+P  +TY  LI+  C                  
Sbjct: 311 SLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRR 370

Query: 320 ---------NL---------RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
                    NL         ++D+A+ +++DM   G+ P    +  ++ G C  G   ++
Sbjct: 371 AILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKA 430

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIR 415
            N  ++       P    + +L+       +   A  + EK+  R+ A  D   +N  I 
Sbjct: 431 FNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII-REGASPDLIMFNALID 489

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C N  + +A+ LL  M   ++VPD  TY+  + G+C+    E+A  + +++  + +  
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ISY+ L+ G  +   I +A  +   M   G + +  ++N LI GLC  ++ D A  L 
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELL 609

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKL 560
               S G +   STY  ++ G+ K+
Sbjct: 610 KEMVSKGITPDDSTYFSLIEGIGKV 634



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 170/371 (45%), Gaps = 16/371 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-----GAIVEEKRGFADFVFVY 190
           +++  + +  RV GA  VL  M + G +     +  ++     G  +EE  G      + 
Sbjct: 276 TVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASG------IL 329

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M + G++P   T N L++       +  A      M ++   P   T+ ++I  L   
Sbjct: 330 EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLE 389

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++D++  ++ +M D GI  +   Y  +I   CR    ++A  L   M +  + P  +TY
Sbjct: 390 GKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTY 449

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DK 368
             LI  L +  R+  A+D+ E +I  G +P   +F  ++ G C  G  D +   L+  DK
Sbjct: 450 TSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDK 509

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
              V     +N L++  C  GK   A+ +L++M  R I  D  S+N  I    +  +I  
Sbjct: 510 RNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIND 569

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A+ +   M+     P   TY+A + G CK    + A  + +++ ++ +  D  +Y  L+E
Sbjct: 570 AFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIE 629

Query: 486 GLCQVEKITEA 496
           G+ +V+  +EA
Sbjct: 630 GIGKVDDSSEA 640



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 168/392 (42%), Gaps = 5/392 (1%)

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE----SVN 363
           + ++ LI   CE  R DDA +  + M   G+ P  + F  ++    ++ + +        
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
               K        N ++   C  GK   AK  +  M +  +  +  ++N  I   C    
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  +L  M    V PD  TY + + G CK    E+A  +  ++    L+  +++Y+ 
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++G C    + +A      M +     + S++N+LI+ L +  K+D+A  +      SG
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
               + TY  ++ G  +   AK    +  +M+ +G    +  Y  LI  +S++N++K   
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  +++ G  PD     +L+ G      L    + + ++   + V D   YN L+ G 
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +EG   +A  LL  M  +G  PD  ++  L+
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLI 558



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 155/362 (42%), Gaps = 7/362 (1%)

Query: 339 TPTDDVFVDIVRGLCEVGKFD---ESVNFLEDKCGYVTS--PHNALLECCCNAGKFFLAK 393
           T +  VF  ++R  CE+ + D   E  + +++K G V      NA+L       +     
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEK-GVVPKIETFNAMLSLFLKLNQTETVW 221

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +  +M   KI +   ++NI I  LC+  +++KA + +G M    V P+  TY+  + G 
Sbjct: 222 VLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGY 281

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C     E A  V   +  + +  DS +Y  L+ G+C+  K+ EA  +   M + G   ++
Sbjct: 282 CSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTA 341

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++N LI G C    + KA   R          T STY  ++  L    +  +   ++  
Sbjct: 342 VTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKD 401

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   D   Y ILI         K      + M+  G+ P   T  SL++ L+  ++
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           +        K++ +    D  M+N LI+G    G   +A  LL  M  +  VPD  T+  
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521

Query: 693 LV 694
           L+
Sbjct: 522 LM 523


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 214/499 (42%), Gaps = 30/499 (6%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +++MV AGI P V T N ++  + +   + +A   F +M K G  P+  T+  +I G   
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +D+SV +  EM  +G + ++  Y  +I   C+   +  A   F+ M+  DL P+ ++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  LI+ LC+   +  A     DM  +GL P +  +  ++   C+ G   E+        
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEA-------- 291

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
                              F LA  +L++  D  I    ++   +  LCE   + +A EL
Sbjct: 292 -------------------FMLADEMLQEHVDLNIV---TYTTLLDGLCEEGMMNEAEEL 329

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              M  + V P+   Y+A + G  K+ + + A+ +F ++  + +  D + +  +V GLC 
Sbjct: 330 FRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCS 389

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             K+ E   +   M ++G   +   +  L+          +AI L       GT  T  T
Sbjct: 390 ESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVT 449

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           +  ++ GL K    ++ +    +M       +V  Y  LI  + + N + D    F+ M 
Sbjct: 450 FCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQ 509

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
              ++PD+    +++ G           +  NK++     LD   Y  L+ GL + G   
Sbjct: 510 DKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQ 569

Query: 670 QASYLLDLMLGKGWVPDAT 688
           QA   L  M+GKG +PD T
Sbjct: 570 QARKFLAEMIGKGIIPDET 588



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 209/478 (43%), Gaps = 12/478 (2%)

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF---VYKEMVKAGIVPNVDTLNYLLEVL 212
           +M   G   +V  +N+++G + +E     D +    ++++M K G+ P++ T N L++  
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKE----GDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +   ++ ++  F  M   GC P+  T+  +I        +  +     EM D  ++  +
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y+ +I  LC+E  ++ AI+ F  M  + L+P+E TY  LI+  C+   L +A  + ++
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           M+   +      +  ++ GLCE G  +E+            +P    + AL+        
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +  +M ++ I  D   W   +  LC   ++ +   ++  M  S +  +   Y+ 
Sbjct: 358 MDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTT 417

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +    K  N  +A+ +  ++      +  +++  L++GLC+   + EA+  F  M  + 
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD 477

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              + + +  LI GLC    +  A +L               YT ++ G +K    ++ L
Sbjct: 478 LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEAL 537

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            +  +M+  G  LD+ AY  L+  +S+  +++    F   M+  G++PD      LL 
Sbjct: 538 NMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLR 595



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 1/282 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L   G + E E L + M K       +A  +L+   +    ++ AM +   M
Sbjct: 309 TYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEM 368

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                K  + ++  ++  +  E +   +   +  EM ++GI  N      L++  F+   
Sbjct: 369 REKDIKPDILLWGTIVWGLCSESK-LEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGN 427

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
              A++    M   G      TF  +I GL     V +++   G M D  +Q  ++ YT 
Sbjct: 428 RTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTA 487

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC+ N + +A +LF  M+  +++PD++ Y  +I+   ++    +A ++   M+ +G
Sbjct: 488 LIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
           +      +  +V GL + G+  ++  FL +  G    P   L
Sbjct: 548 IELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETL 589



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 3/190 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYL 208
           A+ +L  M   G +++V  F  ++  +   KRG   + ++ +  M    + PNV     L
Sbjct: 431 AINLLEEMRDLGTEVTVVTFCALIDGLC--KRGLVQEAIYYFGRMPDHDLQPNVAVYTAL 488

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L + N I  A   F  M  K   P+   +  +I G + +    +++++  +M ++GI
Sbjct: 489 IDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGI 548

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           +L+L  YT ++  L +  ++++A +    M    ++PDE     L+    E   +D+A +
Sbjct: 549 ELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIE 608

Query: 329 ILEDMIVIGL 338
           +  +++  GL
Sbjct: 609 LQNELVEKGL 618


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 249/560 (44%), Gaps = 27/560 (4%)

Query: 117 GLCQ---NMVKERYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           G C+   NM+     N   +L  SLV S+ N      A ++L  M + G      V+N+ 
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218

Query: 173 LGAIV-EEKRGFADFV----FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +G+I  +EK    D +     +Y EM+ A  V N   +      L    + + A    + 
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KG  P++ T+  VI  L   ++V+ +  +  EM  +G+  ++  YT +I   C+   
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E+A  LF+ MR++   P  +TY  LI+   +  ++  ANDI   M+  G  P D  +  
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           +V GLC+ G   ++        G   S  +     C    +  LA  ++           
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC--EDRHTLAPNVV----------- 445

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   +  LC+  ++  A+ELL  M+ S   P+   Y A + G CK    + A  VF Q
Sbjct: 446 -TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++    +    +Y+ L++ + +  ++  A++V   M K+ C+ +  ++  +I GLC + +
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
            +KA++L SL    G S    TYT ++ GL K  +    L +  QM  +GC+ +   Y +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI-NKLVSD 646
           LI  +     L    L    M +       +     + G    S+  + S GI  ++ S 
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF---SKSFIASLGILEEMESY 681

Query: 647 SEVLDSSMYNILINGLWKEG 666
             V  + +Y +LI+   K G
Sbjct: 682 GTVPIAPVYGMLIDCFSKAG 701



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 244/585 (41%), Gaps = 48/585 (8%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+  F+   ++    R++  M + G   +  +FN ++ +   EK    D+ 
Sbjct: 140 PNVV-TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK----DYA 194

Query: 188 FVYK---EMVKAGIVPNVDTLNYLL------EVLFETNRIESALDQFRRMHKKGCCPNSR 238
           + YK    M   G  P     N  +      E L   + ++ A   +  M    C  N  
Sbjct: 195 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 254

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
                 + L    + D +  ++ EM   G   + S Y+ +I  LC   K+E+A  LF+ M
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           + + + PD  TY  LI+  C+   ++ A  + E+M  +G +PT   +  ++    +  + 
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
            ++ +           P    + AL++  C AG    A  +  K+    I   DS +   
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL----IGTSDSADSDF 430

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            + CE+                ++ P+  TY A V G CK    + A  +   + +    
Sbjct: 431 YFPCEDRH--------------TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + I Y  L++G C+  KI  A EVF  M+K G   S  ++  LI  +    ++D A+++
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            S       +    TYT ++ GL ++  ++  L +L+ M  +GC+ +V  Y  LI  + +
Sbjct: 537 LSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK 596

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLH-----GLADGSQLHLVSSGINKLVSDSEV 649
             K+      F  M + G  P+  T   L++     GL D ++L L   G  K     + 
Sbjct: 597 AGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL---GEMKQTYWPKY 653

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L    Y   I G  K  + S    +L+ M   G VP A  +G+L+
Sbjct: 654 LQG--YRCAIQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLI 694



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/589 (21%), Positives = 222/589 (37%), Gaps = 87/589 (14%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPN------------------ 201
           G++ S   +N ++  +     G  D  F V KEM ++G   +                  
Sbjct: 35  GYRPSKVTYNALVQVL--SSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 202 ------------VDTL--NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
                       +DT+   +++  L E +  + A+    RM    C PN  T+  ++ G 
Sbjct: 93  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           +   ++     I+  M   G     S +  ++   C E     A +L   M      P  
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 308 LTYEELINCLCENLR------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           + Y   I  +C   +      LD A  I  +M+            +  R LC VGKFD++
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
              ++                              E M    + D  +++  I +LC   
Sbjct: 273 FQLIK------------------------------EMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ KA+ L   M +  V PD  TY+  +   CK    E A  +F ++ +       ++Y+
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+    + +++ +A ++F  M   GC  +  ++  L+ GLC    + KA  + +    +
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 542 GTSYTTS----------------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             S  +                 TY  ++ GL K  +      +L  ML  GC  +   Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    +  K+      F  M K G +P   T  SL+  +    +L L    +++++ 
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           DS   +   Y  +I+GL + G + +A  LL LM  KG  P+  T+  L+
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/537 (22%), Positives = 230/537 (42%), Gaps = 29/537 (5%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-V 123
           +  R L        A ++ K + ++K F     TY K+I  L  A  VE+   L Q M +
Sbjct: 258 NFARCLCGVGKFDKAFQLIKEM-MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A  +   M S G   +V  +  ++ A ++ K+  
Sbjct: 317 VGVTPDVYTYTI-LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-V 374

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM--------------- 228
                ++  MV AG  PN  T   L++ L +   I  A + + ++               
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 229 -HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
             +    PN  T+  ++ GL    +VD +  +L  M   G +     Y  +I   C+  K
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A  +F  M     +P   TY  LI+ + ++ RLD A  +L  M+    TP    +  
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC +G+ ++++  L    E  C      + AL++    AGK  L+  +  +M+ + 
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + +  ++ + I  LC    + KA  LLG M  +        Y   + G  K  ++  +L
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASL 672

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS--FNILIY 520
            +  ++ +   V  +  Y  L++   +  ++  A+E+   M +   S+ + +  +  LI 
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            LC+  +V++A RL S     G     S +  ++ GLV++++  + L +   +  EG
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 9/294 (3%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  ++ L    ++   + +   M  S    D  T   F    CK   + DAL +   +
Sbjct: 42  TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM---I 98

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +   LD++  + ++ GL +     EA+     M  N C  +  ++  L+ G    +++
Sbjct: 99  EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 158

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
               R+ ++  + G +   S +  ++      +       +L +M   GC      Y I 
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218

Query: 589 IQSMSEQNKLKDCALF------FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
           I S+  Q KL    L       +  M+ A  V ++  + +    L    +       I +
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           ++    V D+S Y+ +I  L       +A  L   M   G  PD  T+ +L+ S
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 3/195 (1%)

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G   S  ++N L+  L    +VD   R++     SG      T       L K  R  D 
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L ++ +   E   LD      +I  + E +   +   F + M     +P+  T  +LL G
Sbjct: 95  LDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                QL      IN ++++    + S++N L++    E   + A  LL+ M   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 687 ATTHGLLVGSSVGEE 701
              + + +GS  G+E
Sbjct: 212 YVVYNIFIGSICGQE 226


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 242/555 (43%), Gaps = 23/555 (4%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+  S+  +N VL A+ +     A  +     M++ G+ PNV T N L+  L    + E 
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRLLA--SMLRDGVAPNVYTYNILVRALCARGQREE 172

Query: 221 ALDQFRR-MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           AL      M   GC PN  T+  ++        VD +  ++G M + G++  L  +  ++
Sbjct: 173 ALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVV 232

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC+  ++E+A ++F  M    L PD ++Y  L++  C+   L +A  +  +M   G+ 
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           P    F  ++  +C  G  + +V  +    E           AL++  C  G    A   
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +++M + +I      +N+ I   C+   + +A EL+  M    + PD  TYS  + G CK
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           + + + A  + R++  + +V D+I+YS L+ GLC+  ++ +A E+F  M + G      +
Sbjct: 413 IGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFT 472

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI G C    V KA+ L       G      TY+ ++ GL K  R K+   +L ++ 
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLY 532

Query: 575 VEGCALDVEAY---------------CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            E    D   Y                 L++  S +  +      +  M+      D   
Sbjct: 533 YEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSV 592

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+HG   G  +    S   +L+      +S+    L+ GL++EG+T +A  ++  +L
Sbjct: 593 YSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652

Query: 680 GKGWVPDATTHGLLV 694
               + DA T   L+
Sbjct: 653 NCCSLADAETSKALI 667



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 125/542 (23%), Positives = 232/542 (42%), Gaps = 33/542 (6%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P++   N +L  L + + + SA      M + G  PN  T+ I+++ L A  + +++
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 257 VSILGE-MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + ++G+ M   G    +  Y  ++   CR  +++ A RL  +MR   + P  +T+  ++N
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+  R++DA  + ++M   GLTP    +  +V G C+ G   E++    +       P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELL 430
                 +L+   C AG    A  ++ +M +R +   + ++   I   C N  +  A   +
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    + P    Y+  + G CKL   ++A  +  ++ A+ +  D ++YS ++ G C++
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
                A E+   M K G    + +++ LI GLC  R++  A  L       G      TY
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           T ++ G  K    +  L +  +M+ +G   DV  Y +LI  +S+  + K+       +  
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
              VPD     +L+H         +V+                    L+ G   +GL +Q
Sbjct: 534 EDPVPDNIKYEALMHCCRTAEFKSVVA--------------------LLKGFSMKGLMNQ 573

Query: 671 ASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDI-LAE 724
           A  +   ML + W  D +      HG   G ++ + +   +        P+S S I L  
Sbjct: 574 ADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVR 633

Query: 725 GL 726
           GL
Sbjct: 634 GL 635



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/513 (22%), Positives = 207/513 (40%), Gaps = 82/513 (15%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLV 155
           TY  ++  L   G  EE  G+  + ++     PNV     +LV +F     V+ A R++ 
Sbjct: 156 TYNILVRALCARGQREEALGVVGDDMRGAGCAPNV-VTYNTLVAAFCRAGEVDAAERLVG 214

Query: 156 NMNSGGFKLSVDVFNVVLGAI-----VEEKRGFAD------------------------- 185
            M  GG + S+  FN V+  +     +E+ R   D                         
Sbjct: 215 VMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAG 274

Query: 186 ----FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
                + V+ EM + G+VP+V T   L+  +     +E A+    +M ++G   N  TF 
Sbjct: 275 CLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFT 334

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I G   N  +DD++  + EM +  IQ  +  Y  +I   C+  +++EA  L   M A 
Sbjct: 335 ALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAK 394

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + PD +TY  +++  C+    D A ++   M+  G+ P    +  ++RGLCE  +  ++
Sbjct: 395 GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDA 454

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
               E            +L+      +F                   ++   I   C+  
Sbjct: 455 CELFEK-----------MLQLGLQPDEF-------------------TYTTLIDGHCKEG 484

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            ++KA  L   M+   V+PD  TYS  + G  K    ++A R+  ++  +  V D+I Y 
Sbjct: 485 NVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYE 544

Query: 482 ---------------KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
                           L++G      + +A +V+  M      L  S +++LI+G C   
Sbjct: 545 ALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGG 604

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
            + KA+         G S  +++   ++ GL +
Sbjct: 605 NIMKALSFHKQLLRCGFSPNSTSTISLVRGLFE 637


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/537 (21%), Positives = 228/537 (42%), Gaps = 57/537 (10%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE--------- 178
           PNV     +L+  + +  R+  A R+L  M+  G    +  +N ++  + +         
Sbjct: 183 PNVV-VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 179 -----EKRG-------FADFVFVYK-------------EMVKAGIVPNVDTLNYLLEVLF 213
                + RG       F  F+  Y              EM+  G++PN      L+   F
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +   +  AL  FR +H  G  P+ +T    I GL+ N RV +++ +  E+ + G+  ++ 
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y+ +I   C++ ++E+A  L   M    + P+   Y  L++ LC++  +  A  + + M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
              GL P    +  ++ G C+     E+ +   +       PH    NAL+  CC  G  
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             A  +  +M  +  A   S+N  I   C++ +I++A +L   M+   ++PD  TY+  +
Sbjct: 482 EKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 541

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              CK    E+A  +F+++  ++L++D++                    +F  M   G  
Sbjct: 542 DWHCKAGKMEEANLLFKEMQERNLIVDTV------------------FALFEKMVAKGVK 583

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               ++ ++IY  C    + +A +LR      G     + +  ++  L K +   +   +
Sbjct: 584 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 643

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L +M   G    + A   L++S  E  K+ +    F  +   GLVPD  T++ L++G
Sbjct: 644 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/542 (23%), Positives = 234/542 (43%), Gaps = 13/542 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   + ++   +   KR   +    ++EM K G+ P+ +  + L++      
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKR-MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 59

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            I+  L     M   G   N  T+ ++I GL    +++ +  IL  M  LG +     + 
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   CRE+ +  A+ L   M   +L+P  ++Y  +IN LC    L  AN +LE M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           GL P   V+  ++ G    G+ +E+   L+       +P    +NA++ C   AGK   A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
              L ++  R +  D  ++   I    +  ++ +A +    M+   ++P+   Y+  + G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K  N  +AL +FR + A  ++ D  + S  + GL +  ++ EA++VF  + + G    
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLV 568
             +++ LI G C   +V+KA  L       G +     Y  ++ GL K   +QRA+ L  
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            + +   +G   D   Y  +I    +   + +    F+ M   G+ P      +L+HG  
Sbjct: 420 GMPE---KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC 476

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               +    +   +++        S +N LI+G  K     +AS L   M+ K  +PD  
Sbjct: 477 KEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 535

Query: 689 TH 690
           T+
Sbjct: 536 TY 537



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 141/640 (22%), Positives = 271/640 (42%), Gaps = 62/640 (9%)

Query: 97  DTYCKMILKLGL--AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           +TY   I+  GL  A  + E +   + M K        A  +L+  F+    ++  +R+ 
Sbjct: 9   NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M S G  +++  +NV++  + +  +       + K M+  G  PN  T   L+E    
Sbjct: 69  DVMVSCGIPINLITYNVLIHGLCKFGK-MEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
            + +  AL+    M K+   P++ ++  +I GL     +  +  +L +M   G++  +  
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y+ +I     E ++EEA RL   M    + PD   Y  +I+CL +  ++++A+  L ++ 
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA-------- 386
             GL P    F   + G  + GK  E+  + ++   +   P+N L     N         
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 307

Query: 387 -------------------------------GKFFLAKCILEKMADRK-IADCDSWNIPI 414
                                          G+   A  +  ++ ++  + D  +++  I
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C+  E+ KA+EL   M +  + P+   Y+A V G CK  + + A ++F  +  + L 
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 427

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            DS++YS +++G C+ E + EA  +F  M   G    S  +N L++G C    ++KA+ L
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G + TT ++  ++ G  K  + ++   +  +M+ +    D   Y  +I    +
Sbjct: 488 FREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 546

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             K+++  L F  M +  L+ D  T+ +L                  K+V+     D   
Sbjct: 547 AGKMEEANLLFKEMQERNLIVD--TVFALFE----------------KMVAKGVKPDEVT 588

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y ++I    KE    +A  L D ++GKG +   T H LL+
Sbjct: 589 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 628



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 182/450 (40%), Gaps = 35/450 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT I   LCR  ++ EA   F+ M+   L PD      LI+       +D+   I + M+
Sbjct: 13  YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 72

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G+      +  ++ GLC+ GK +++   L+   G +T      L C  N+  F    C
Sbjct: 73  SCGIPINLITYNVLIHGLCKFGKMEKAAEILK---GMIT------LGCKPNSRTF----C 119

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +L                 I   C    + +A ELL  M   ++VP   +Y A + G C 
Sbjct: 120 LL-----------------IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 162

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             +   A ++  +++   L  + + YS L+ G     +I EA  +   MS +G +     
Sbjct: 163 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 222

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N +I  L    K+++A          G      T+   +LG  K  +  +      +ML
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   +   Y +LI    +   L +    F  +   G++PD +T  + +HGL    ++ 
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 ++L     V D   Y+ LI+G  K+G   +A  L D M  KG  P+   +  LV
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 402

Query: 695 -GSSVGEEIDSRRFAFDSSS----FPDSVS 719
            G     +I   R  FD        PDSV+
Sbjct: 403 DGLCKSGDIQRARKLFDGMPEKGLEPDSVT 432


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 219/508 (43%), Gaps = 42/508 (8%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N+VL A+ +E R + D   VY EM++ GI P++ T N LL+  F   R++ A    R M 
Sbjct: 200 NLVLRALRDEAR-WDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREME 258

Query: 230 KK--GCCPNSRTFEIVIKGL----------------------------------IANSRV 253
            +  GC P+  T+ +VI GL                                   A   V
Sbjct: 259 ARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSV 318

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           + + ++  EM + GI   +  Y  II  + R   +E A   F  MRA+ L+PD +TY  L
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKC 369
           IN  C+   L +A  +  D+   GL P+   +  ++ G C +G  +E+  F    +E  C
Sbjct: 379 INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
               S +  L+          + +   ++M  + +  DC ++N  I          +A++
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L   M+   +  D  TY+ F+ G CK  N +DA  ++ ++ +  L  D I+Y+ L+   C
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  ++ EA ++F  M  +G   S+ ++ + I+  C    +  A          G      
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  ++  L ++ R         +ML  G + +   Y +LI    ++   ++    ++ M
Sbjct: 619 TYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEM 678

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLV 636
            + G+ PD  T  +L  G  +G   H +
Sbjct: 679 HQHGIHPDHCTHNALFKGFDEGQSKHAI 706



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 216/486 (44%), Gaps = 8/486 (1%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           L  FR M   G  P  +   +V++ L   +R DD  S+  EM  LGI+  +  Y  ++  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 282 LCRENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             RE ++++A +L + M  R    +P ++TY  +IN L     L+ A  ++ D + +   
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLV-DRMRMSKK 299

Query: 340 PTDDVFVDIVRGLCEVGKFDES--VNFLEDKCGYVTS--PHNALLECCCNAGKFFLAKC- 394
            +   F  ++ G    G  +++  +    +  G V +   +N ++     +G    A+  
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            +E  A   + D  ++N  I   C+   +++A  L G +  + + P   TY+  + G C+
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + E+A R  +++  Q    D  +Y+ L+ G  +V  +    E F  M   G      +
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N  I    ++    +A +L  +  S G S  T TY   + GL K    KD  V+  +M+
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G   D   Y  LI +  E+ +L++    F+ M+ +GL P   T    +H       L+
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                  K++ +    +   YN+LI+ L + G T+ A      ML +G  P+  T+ LL+
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659

Query: 695 GSSVGE 700
             +  E
Sbjct: 660 DGNCKE 665


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 239/524 (45%), Gaps = 34/524 (6%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P + + + +++ L +  R + A + F+ M  +G  P+  ++  +I G   + + + +  +
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM D+GIQ +++    +I M C+E K+ EA  L ++M     + D +TY  LI  LC 
Sbjct: 223 FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCM 282

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGYV--- 372
             R+ +A  +   M  +G  P    +  +++GLC+ GK + +++     L D   Y    
Sbjct: 283 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 342

Query: 373 ----TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
                +  + L++  C  GK   A  +LE M  R  I D  +++  I+ LC    I +A 
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS---------- 477
            L   M      PD  TY   + G C+  N   AL++      Q ++ D+          
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH-----QEMLNDTGRYGIKCKPT 457

Query: 478 -ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ISYS +++GLC+  +  EA E+F  M   G      S+  LI+G C+  K +KA  L +
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G     +T + ++  L K  +  +   +L  ++  GC LDV     L++ +  ++
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL------ 650
           ++      F  M K G +P+  T  +L+ GL     + +       ++SD+         
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++  Y+I+I+GL K G   +A  L   M   G +PD  ++  L+
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 681



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 249/558 (44%), Gaps = 32/558 (5%)

Query: 169 FNVVLGAIVEEKR---GFADFVFVYK-----EMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           FN+++  +   KR   G A    + +     ++V   I P+V T + L+++L +  ++  
Sbjct: 13  FNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIE 72

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A +    M ++GC  +  T+  +IKGL    R+ ++  +   M  LG + +   Y  ++ 
Sbjct: 73  ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 132

Query: 281 MLCRENKLEEAIRLFKMM------RALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
            LC+   +  A++L + M        +   P  ++Y  +I+ LC++ R D+A ++ ++M 
Sbjct: 133 GLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 192

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G+ P    +  ++ G C  GK++++     +       P       L++  C  GK  
Sbjct: 193 AQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVI 252

Query: 391 LAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +LE M  R  I D  +++  I+ LC    I +A +L   M      PD   Y   +
Sbjct: 253 EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312

Query: 450 LGKCKLCNYEDALRVFR-------QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            G C+      AL + +       Q   + +  D  + S L++ LC+  K+ EA E+   
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEV 372

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M + GC L   +++ LI GLC+  ++ +A  L       G      TY  +M GL +   
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432

Query: 563 AKDLLVVLAQMLVE------GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
               L +  +ML +       C   + +Y I+I  + +  +  +    F  M   G++PD
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             +  +L+HG     +        N+++      D +  ++LI+ L K+G   +A+ LL+
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552

Query: 677 LMLGKGWVPDATTHGLLV 694
           +++ +G + D  T   LV
Sbjct: 553 VVIQRGCILDVVTCTTLV 570



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 245/545 (44%), Gaps = 70/545 (12%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G + ++ T + L++ L   +RI  A   F  M K GC P++ T+  ++KGL     
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432

Query: 253 VDDSVSILGEMFD----LGIQLELSF--YTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           ++ ++ +  EM +     GI+ + +   Y+ II  LC++ + +EA  LF+ M+A  +MPD
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRGLCEVGKFDESVN 363
            ++Y  LI+  C + + + A  +  +M+ +G+ P   T  V +D+   LC+ GK  E+  
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDM---LCKKGKVIEANK 549

Query: 364 FLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD----RKIADCDSWNIPIR 415
            LE      C         L++  C   +   A  +  KM        +  C +    ++
Sbjct: 550 LLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL---MK 606

Query: 416 WLCENEEIRKAYELLGRMVVSS------VVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
            LC++  I+ A EL   M+  +        P+  +YS  + G CK    ++A  +F+++ 
Sbjct: 607 GLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMK 666

Query: 470 AQSLVLDSISYSKLVEG-----------------------------------LCQVEKIT 494
           A  ++ D ISY+ L+ G                                   LC+  K+ 
Sbjct: 667 ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVI 726

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA E+   M + GC  ++ ++  L+ GLC+  ++ +A +L       G      TY  +M
Sbjct: 727 EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 786

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCAL------DVEAYCILIQSMSEQNKLKDCALFFNVM 608
            GL +    K  L +  +ML +          DV +Y I+I  + +  +  +    F  M
Sbjct: 787 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 846

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G++P+  +  SL+HG     +L       N++V     L++  Y+++I+G  KEG  
Sbjct: 847 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906

Query: 669 SQASY 673
            +A +
Sbjct: 907 DKALF 911



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 230/503 (45%), Gaps = 39/503 (7%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG---------IQLELSFYTCI 278
           M   G  P+S TF I+I  L    RV++ ++ +  +   G         I+ +++  + +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I +LC+E K+ EA  L ++M     + D +TY  LI  LC   R+ +A  +   M  +G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLED----------KCGYVTSPHNALLECCCNAGK 388
            P    +  +++GLC+ G  + ++   ++          KC      ++ +++  C   +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 389 FFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A+ + ++M A   + D  S+   I   C + +  KA  L   M+   + PD  T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   CK     +A  +   +  +  +LD ++YS L++GLC   +I+EA ++F  M K G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY----------TTSTYTKIMLGL 557
           C   + ++  L+ GLC   K++ A+ L     +  + Y          T+S    I+   
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K+  A +LL V+ Q    GC LD+  Y  LI+ +  ++++ +    F  M K G  PD 
Sbjct: 361 GKVIEANELLEVMIQ---RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 417

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM------YNILINGLWKEGLTSQA 671
            T  +L+ GL     +++      ++++D+             Y+I+I+GL K+    +A
Sbjct: 418 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 477

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             L + M  +G +PD  ++  L+
Sbjct: 478 RELFEEMKAQGIMPDVISYTTLI 500



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 178/356 (50%), Gaps = 42/356 (11%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM------HKKGCCPNSRTFEI 242
           ++ +M K G +PNV T   L++ L ++  I+ AL+  + M      +   C PN+ ++ I
Sbjct: 585 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 644

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GL    R D++  +  EM  LG+  ++  YT +I   CR  K ++A  LF  M  + 
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD  T+  LI+ LC+  ++ +AN++LE MI  G  P    +  +V+GLC   +  E  
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE-- 762

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                                  A + F+    ++K+    + D  ++   ++ LC+   
Sbjct: 763 -----------------------ATQLFMK---MQKLG--CLPDVVTYGTLMKGLCQTGN 794

Query: 423 IRKAYELLGRMVV------SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           I+ A EL  +M+       ++  PD  +YS  + G CK    ++A  +F+++ A  ++ +
Sbjct: 795 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 854

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            ISY+ L+ G C+  K+ +A  +F  M   G  L++ +++++I+G C   ++DKA+
Sbjct: 855 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 149/321 (46%), Gaps = 30/321 (9%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE----MEGLCQ---------- 120
           D+ +   + K + ++ R       + KM  KLG   NV      M+GLCQ          
Sbjct: 562 DVVTCTTLVKGLCMKHRISKATQLFLKM-QKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620

Query: 121 --NMVKERYP---NVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
             NM+ +  P   N +   IS   ++       R + A  +   M + G    V  +  +
Sbjct: 621 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 680

Query: 173 LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
           +       + + D  +++ EMV  G+ P+V T + L+++L +  ++  A +    M ++G
Sbjct: 681 IHGFCRSGK-WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C PN+ T+  ++KGL  N R+ ++  +  +M  LG   ++  Y  ++  LC+   ++ A+
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799

Query: 293 RLFKMM------RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
            L K M         +  PD ++Y  +I+ LC++ R D+A ++ ++M  +G+ P    + 
Sbjct: 800 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 859

Query: 347 DIVRGLCEVGKFDESVNFLED 367
            ++ G C  GK +++ +   +
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNE 880


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/599 (22%), Positives = 253/599 (42%), Gaps = 47/599 (7%)

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL---VNMNS 159
           + +L  AG+V+ ++   Q M     P    AL++ V +F      + A++     V+   
Sbjct: 68  VRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 127

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
                +  ++N ++ A++ E         V   M K G+ PNV T N L+  L + +R+ 
Sbjct: 128 CARPTAPRLYNHLIDALLRENM-VGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVG 186

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           +A      M  KGC P+  T+  ++  L    RVD++  +L     +      + Y  +I
Sbjct: 187 AARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVA-----ASYNAVI 241

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LCRE +++E   +   M    L P+ +TY  ++N  C+   L  A  IL  M++ G T
Sbjct: 242 LALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCT 301

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL-EK 398
           P    F  +V GL   G+  ++++                           + KC++ E 
Sbjct: 302 PNVATFTALVGGLFNDGRVHDALD---------------------------MWKCMVAEG 334

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
            A   +    S+N+ IR LC   +++ A  +L  M      P+  TYS  + G  K  + 
Sbjct: 335 WAPSTV----SYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDL 390

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           + A+ ++  ++      + + Y+ +V   C+     +A  +   M    C  ++ +FN L
Sbjct: 391 DGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTL 450

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I  LC  R+V +A+ +       G      TY +++ GL +     D L ++ +M   G 
Sbjct: 451 IRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS- 637
            L +  Y  ++  + +    ++   F   M+  G+ PD  T  +++H      ++ + + 
Sbjct: 511 ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAW 570

Query: 638 --SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               +N +     +L   +Y IL+  L  +     A   L  ML +G  P+  T  +LV
Sbjct: 571 ILGAMNVVNCGRNIL---VYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLV 626



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 165/397 (41%), Gaps = 8/397 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N V+ A+  E R   +   V  +MV  G+ PNV T   ++    +   +  A     RM
Sbjct: 237 YNAVILALCREFR-MQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              GC PN  TF  ++ GL  + RV D++ +   M   G       Y  +I  LC    L
Sbjct: 296 VITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDL 355

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + A  +   M      P+  TY  LI+   +   LD A  I  DM   G  P   V+ ++
Sbjct: 356 KGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNM 415

Query: 349 VRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           V   C+   F+++ + ++    + C   T   N L+   CN  +   A  +  +M     
Sbjct: 416 VGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGC 475

Query: 405 A-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  ++N  +  L        A +++  M    +     TY+  V G C++    +A+ 
Sbjct: 476 PPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMF 535

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
              ++  + +  D+ +++ ++   C+  ++  A  +   M+   C  +   + IL+  LC
Sbjct: 536 FVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELC 595

Query: 524 VMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              K++ A + L  + Y  G    T T+  ++ G+ +
Sbjct: 596 NQDKLEDAMVYLLKMLY-EGIYPNTVTWNVLVRGVFR 631



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 5/265 (1%)

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
           G M    V P+  TY+  V   C+      A ++  +++ +    D ++Y  +V  LC +
Sbjct: 158 GNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTL 217

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ EA EV      +     ++S+N +I  LC   ++ +   +       G      TY
Sbjct: 218 GRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITY 272

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           T I+    K    +    +LA+M++ GC  +V  +  L+  +    ++ D    +  MV 
Sbjct: 273 TTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVA 332

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G  P   +   L+ GL     L   SS +N +       ++  Y+ LI+G  K G    
Sbjct: 333 EGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDG 392

Query: 671 ASYLLDLMLGKGWVPDATTHGLLVG 695
           A  + + M   G  P+   +  +VG
Sbjct: 393 AISIWNDMTRSGCKPNVVVYTNMVG 417



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 18/276 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKR--------FQHTADTYCKMILKLGLAGNVEEMEG 117
           LI       DL  A+ I  W  + +         + +    +CK ++         + E 
Sbjct: 380 LIDGFSKAGDLDGAISI--WNDMTRSGCKPNVVVYTNMVGVFCKKLM-------FNQAES 430

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           L   M+ E  P       +L+ S  N  RV  A+ V   M   G   +   +N +L  + 
Sbjct: 431 LIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLF 490

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E     D + +  EM   GI  ++ T N ++  L +      A+    RM  +G  P++
Sbjct: 491 REGN-CGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDA 549

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +I        V  +  ILG M  +     +  YT ++  LC ++KLE+A+     
Sbjct: 550 FTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLK 609

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           M    + P+ +T+  L+  +  NL  ++ +D ++ +
Sbjct: 610 MLYEGIYPNTVTWNVLVRGVFRNLGCNNPSDFIQHI 645


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 239/539 (44%), Gaps = 36/539 (6%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+  SV  +N VL A+ +     A        M++ G+ PNV T N L+  L    R+E 
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFL--SSMLRHGVAPNVYTYNILVRALCARGRLEE 170

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCII 279
           A+     M   GC PN+ T+  ++        +D +  ++  M + G  +  L  +  ++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC+  ++E A ++F  M    L PD ++Y  L++  C+   L ++  +  +M   GL 
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAK 393
           P    F  ++   C+ G  +++V  +        +   VT    AL++  C  G  FL  
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT--FTALIDGFCKKG--FLDD 346

Query: 394 CILEKMADRKIADCDS---WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            +L     RK     S   +N  I   C+   +  A EL+  M    V PD  TYS  + 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK+ N + A ++ +++  + ++ D+I+YS L+ GLC+ +++ +A E+F  M + G   
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              ++  LI G C    V+KA+ L       G      TY+ ++ GL K  R K+   +L
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            ++  E    D   Y  L+   S+                     + +++++LL G    
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKA--------------------EFKSVVALLKGFCMK 566

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             +         ++  +  LD S+Y+ILI+G  + G   +A      ML  G+ P++T+
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/553 (22%), Positives = 235/553 (42%), Gaps = 55/553 (9%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+V   N +L  L + + + SA      M + G  PN  T+ I+++ L A  R++++
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL-DLMPDELTYEELIN 315
           V ++G+M   G       Y  ++   CR  +L+ A R+  +MR   +  P+ +T+  ++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+  R++ A  + ++M+  GL P    +  ++ G C+VG   ES+             
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL------------- 278

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                              +  +M  R  + D  ++   I   C+   + +A  L+ +M 
Sbjct: 279 ------------------AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 320

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  +  T++A + G CK    +DAL    ++    +    + Y+ L+ G C++ ++ 
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A E+   M          +++ +I G C +  +D A +L       G      TY+ ++
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL + +R  D   +   ML  G   D   Y  LI    ++  ++      + M++ G++
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN---------------ILI 659
           PD  T   L++GL+  ++       + KL  +  V D+  Y+                L+
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFDSSSF 714
            G   +GL  +A  +   ML + W  D + + +L+     G +V + +   +    S   
Sbjct: 561 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 620

Query: 715 PDSVSDI-LAEGL 726
           P+S S I L  GL
Sbjct: 621 PNSTSTISLVRGL 633



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 244/588 (41%), Gaps = 69/588 (11%)

Query: 57  LRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           LRH ++P+      L+R L     L  A+ +   +         A TY  ++     AG 
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNAVTYNTLVAAFCRAGE 202

Query: 112 VEEMEGLCQNMVKERYPNVREALI---SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           ++  E +   M +E   N +  L+   S+V       R+ GA +V   M   G    V  
Sbjct: 203 LDGAERVVSLMREE--GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 260

Query: 169 FNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +N +L      K G   + + V+ EM + G+VP+V T   L+    +   +E A+    +
Sbjct: 261 YNTLLSGYC--KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M ++G   N  TF  +I G      +DD++  + EM   GIQ  +  Y  +I   C+  +
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A  L + M A  + PD +TY  +I+  C+   LD A  + + M+  G+ P    +  
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           ++RGLCE  + +++    E+           +L+      +F                  
Sbjct: 439 LIRGLCEEKRLNDACELFEN-----------MLQLGVQPDEF------------------ 469

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   I   C+   + KA  L   M+   V+PD  TYS  + G  K    ++A R+  +
Sbjct: 470 -TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 468 VSAQSLVLDSISYS---------------KLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           +  +  V D+I Y                 L++G C    + EA +V+  M      L  
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA- 571
           S ++ILI+G C    V KA+        SG S  +++   ++ GL      ++ +VV A 
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF-----EEGMVVEAD 643

Query: 572 ---QMLVEGCAL-DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              Q L+  C L D EA   LI    ++  +         M + GL+P
Sbjct: 644 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/595 (23%), Positives = 273/595 (45%), Gaps = 30/595 (5%)

Query: 91  RFQHTADTYCKMILKLGLAGN----VEEMEGLCQ--------NMVKERYPNVREALISLV 138
           R +H+  T+  +ILK G   N     + ++GLC         +++ +R P +     ++ 
Sbjct: 113 RLKHSFATF-GLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVS 171

Query: 139 FS-----FVNHYRVNGAM---RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           +S     F N  R   A+   R++ N +      +V  +  V+  + + +  F     V+
Sbjct: 172 YSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQL-FDRAEGVF 230

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M+  G+ PN DT N L+       + +  +    +M  +G  P+  T+  ++  L A 
Sbjct: 231 QQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCAL 290

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           S +    S L  M + G+  +   +        +   +++A+ +F  MR   L P+ + Y
Sbjct: 291 SEMH---SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 347

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+ LC+  R+DDA      MI  G+TP   VF  +V GLC V K++ +   + +   
Sbjct: 348 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 407

Query: 371 YVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
               P+    N L+   CN G+    + +++ M    +  D  S+   I   C      +
Sbjct: 408 QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDE 467

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A ++   MV   + P   TY+  + G C     +DA  +FR++  + +    ++Y+ ++ 
Sbjct: 468 AEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILH 527

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GL Q ++ +EA E++  M  +G      ++NI++ GLC    VD+A ++     S G   
Sbjct: 528 GLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 587

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              T+T ++  L+K  R +D + + A +   G   +V  Y ++ +++ E+  L++    F
Sbjct: 588 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF 647

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
           + M K G  P+ + + +L+  L     +    + ++KL   +  +++S  ++LI+
Sbjct: 648 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLIS 702



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 226/522 (43%), Gaps = 15/522 (2%)

Query: 187 VFVYKEMVKA---GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           V ++  MV+     + PN  T + L+  L    R++ +   F  + K G   N      +
Sbjct: 80  VSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQL 139

Query: 244 IKGLIANSRVDDSVSIL-GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM---R 299
           +KGL    RV +++ +L   M +LG   +   Y+ ++   C EN+ EEA+ L +MM    
Sbjct: 140 LKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDH 199

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                P+ +TY  +I+ LC+    D A  + + MI  G+ P +D +  ++ G   +GK+ 
Sbjct: 200 GRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWK 259

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPI 414
           E V  LE        P    + +LL   C   +       L+ M +  ++ D   +NI  
Sbjct: 260 EVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEM---HSFLDLMVENGLSPDHHIFNIFF 316

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
               +   I KA ++  +M    + P+   Y A +   CKL   +DA   F Q+  + + 
Sbjct: 317 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 376

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + + ++ LV GLC V+K   A E+   M   G   ++  FN LI  LC + +V +  RL
Sbjct: 377 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 436

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             L    G      +YT ++ G     R  +   V   M+  G +     Y  L+     
Sbjct: 437 IDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 496

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            +++ D    F  M++ G+ P   T  ++LHGL    +          +++     D   
Sbjct: 497 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 556

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           YNI++NGL K     +A  +   +  KG   +  T  +++G+
Sbjct: 557 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 598



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 139/596 (23%), Positives = 253/596 (42%), Gaps = 45/596 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++++  V N +L  + + KR       + + M + G  P+  + + LL+     NR E 
Sbjct: 128 GWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEE 187

Query: 221 ALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           AL+  R M   H + C PN  T+  VI GL      D +  +  +M D G++     Y C
Sbjct: 188 ALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNC 247

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC-------------ENL--- 321
           +I       K +E +++ + M A  L PD  TY  L+N LC             EN    
Sbjct: 248 LIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSP 307

Query: 322 ----------------RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
                            +D A DI   M   GL+P    +  ++  LC++G+ D++    
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 367

Query: 366 EDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
                   +P+    N+L+   C   K+  A+ ++ +M D+ I  +   +N  I  LC  
Sbjct: 368 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             + +   L+  M    V PD  +Y+  + G C     ++A +VF  + +  L    ++Y
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTY 487

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+ G C   +I +A  +F  M + G +    ++N +++GL   ++  +A  L     +
Sbjct: 488 NTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 547

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           SGT     TY  I+ GL K     +   +   +  +G  L++  + I+I ++ +  + +D
Sbjct: 548 SGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 607

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F  +   GLVP+  T   +   L +   L    S  + +  +    +S M N L+ 
Sbjct: 608 AMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 667

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPD 716
            L   G  S+A   L  +  + +  +A+T  LL+     +E     +   + S P+
Sbjct: 668 RLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDE-----YQHHAKSLPE 718


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 225/503 (44%), Gaps = 40/503 (7%)

Query: 46  QTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS-IQKRFQHTADTYCKMIL 104
           Q+      I+     L P+ L+ ++    +L  AL+IF +       F H  DTY  +I 
Sbjct: 35  QSYTVTPPIKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIY 94

Query: 105 KLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
           +L  A   E +E L   +         +  I+++ S+    R   A++  + + + G + 
Sbjct: 95  RLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRR 154

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           SV   N +L A+V+  R F+    ++K    K G+VPNV T N L++ L + N +E A  
Sbjct: 155 SVRSLNTLLNALVQNNR-FSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARK 213

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F  M   G  PN  T+  ++ G ++   +  +  + GE+FD G   + + YT ++    
Sbjct: 214 VFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYV 273

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           ++ +  +A+++   M    + P+++TY  +I   C+  +  +A ++L DM+     P   
Sbjct: 274 KQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSA 333

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           +   ++  LC  G+  E+    E       +P NA+                        
Sbjct: 334 LCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTL-------------------- 373

Query: 404 IADCDSWNIPIRWLCENE---EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
                     I WLC+     E RK +    R  +SS++    TY+  + G C++    +
Sbjct: 374 ----------IHWLCKEGNIWEARKLFNEFERGTISSLL----TYNTLIAGMCEMGELCE 419

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A R++  +  +  V +  +Y+ L++G  +V K  E ++V   M   GC L+ S++ IL+ 
Sbjct: 420 AARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVE 479

Query: 521 GLCVMRKVDKAIRLRSLAYSSGT 543
           GL  + K ++ + + S+  SSG 
Sbjct: 480 GLLKLGKREELLNILSMIISSGA 502



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/471 (21%), Positives = 199/471 (42%), Gaps = 30/471 (6%)

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIP---------------MLCRENKLEEAIRL 294
           N  +   +SI+   F   ++  L  YT   P               M+ R+  L+ A+++
Sbjct: 12  NISLHTPISIVPLRFIFAVETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQQNLDLALQI 71

Query: 295 F----KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           F    K   A     D  TY  +I  L      +    +L ++   G+  ++D+F+ ++R
Sbjct: 72  FHYAGKYHPAFTHNYD--TYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIR 129

Query: 351 --GLCEVGKFDESVNFLEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRK--- 403
             GL    K            G   S    N LL       +F     +L K +  K   
Sbjct: 130 SYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVH-LLFKYSKSKFGV 188

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + +  + NI I+ LC+  ++  A ++   M    +VP+  TY+  + G     +   A R
Sbjct: 189 VPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKR 248

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           VF ++     + D+ +Y+ L++G  +  + T+AV+V   M +NG   +  ++ ++I G C
Sbjct: 249 VFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYC 308

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             RK  +A+ L +          ++   K++  L    R K+   +  ++L + C  D  
Sbjct: 309 KERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNA 368

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
               LI  + ++  + +    FN   + G +    T  +L+ G+ +  +L   +   + +
Sbjct: 369 ITSTLIHWLCKEGNIWEARKLFNEFER-GTISSLLTYNTLIAGMCEMGELCEAARLWDDM 427

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    V +   YN+LI G  K G   +   +++ ML KG + + +T+ +LV
Sbjct: 428 LEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILV 478



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 3/223 (1%)

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS--SFNILIYGLCVMRKVDKAIRLRSLA 538
           ++LV  + + + +  A+++F    K   + + +  +++ +IY L   R  +    L    
Sbjct: 53  NRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLEL 112

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             SG + +   +  ++       R K  L    ++   G    V +   L+ ++ + N+ 
Sbjct: 113 QDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRF 172

Query: 599 KDCALFFNV-MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
               L F     K G+VP+  T   L+  L   + +       +++ S   V +   Y  
Sbjct: 173 SSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTT 232

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           ++ G    G    A  +   +   GW+PDATT+ +L+   V +
Sbjct: 233 ILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQ 275


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 223/469 (47%), Gaps = 6/469 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V  KR +   + +YK+M  + + P+  TLN ++       ++  A     ++
Sbjct: 61  FNKILISLVNVKR-YPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKI 119

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  PN+ T   ++KGL    +V +++    ++   G +L    Y  +I  +C+  + 
Sbjct: 120 LKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGET 179

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + +    + P+ + Y  +I+ LC++  +D+A D+  +M+  G++P    +  +
Sbjct: 180 RAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSIL 239

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           V G C VG+ + +++ L +      +P    +  L++  C  GK   A+ +L  M    +
Sbjct: 240 VSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACV 299

Query: 405 A-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D   ++  +   C   E+  A  +   M    V PD   YS  + G CK+   ++AL 
Sbjct: 300 NLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALN 359

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  +++V D+++Y+ L++ LC+  +I+   ++F  M   G      ++N LI  LC
Sbjct: 360 LFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALC 419

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               +D+AI L +            T+T ++ GL K+ R K+ L     +L +G  L+V 
Sbjct: 420 KNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVR 479

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            Y ++I  + ++  L +     + M   G + D  T   ++    D  +
Sbjct: 480 TYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDE 528



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 215/510 (42%), Gaps = 30/510 (5%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V  +  M      P+    N +L  L    R  +A+  +++M      P+  T  I+I
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +V  + S + ++  LG Q        ++  LC E K++EA+R    + A    
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
              ++Y  LIN +C+      A  +L  +    + P   ++  I+  LC+    DE+ + 
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
             +  G   SP                              D  +++I +   C   ++ 
Sbjct: 221 YTEMVGKGISP------------------------------DVVTYSILVSGFCIVGQLN 250

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A +LL  MV+ ++ PD  TY+  V   CK    ++A  V   +    + LD + YS L+
Sbjct: 251 RAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLM 310

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +G C V ++  A  VF  M++ G +     ++I+I GLC +++VD+A+ L    +     
Sbjct: 311 DGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             T TYT ++  L K  R   +  +  +ML  G   DV  Y  LI ++ +   L      
Sbjct: 371 PDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIAL 430

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           FN M    + P+  T   LL GL    +L         L++    L+   Y ++INGL K
Sbjct: 431 FNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           EGL  +A  L   M   G + DA T  +++
Sbjct: 491 EGLLDEALALQSRMEDNGCISDAVTFEIMI 520



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 40/278 (14%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV---FSFVNHYRVNGAMRVL 154
           TY  ++  L   G V+E E +   MVK    N+   + S +   +  VN   VN A RV 
Sbjct: 270 TYTILVDALCKEGKVKEAENVLAVMVKACV-NLDVVVYSTLMDGYCLVN--EVNNAKRVF 326

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKR--------------------------------- 181
             M   G    V  +++++  + + KR                                 
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386

Query: 182 GFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           G   +V+ ++ EM+  G  P+V T N L++ L +   ++ A+  F +M  +   PN  TF
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I++ GL    R+ +++    ++   G  L +  YT +I  LC+E  L+EA+ L   M  
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
              + D +T+E +I    +    D A  ++ +MI  GL
Sbjct: 507 NGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 156/667 (23%), Positives = 285/667 (42%), Gaps = 70/667 (10%)

Query: 45   HQTTDYEA--KIQSLRHNLSP-------DHLIRVLDNTN-DLSSALKIFKWVSIQKRFQH 94
            HQ T+     + + LR +L P       DHLI VL     D    L  F W   + R   
Sbjct: 503  HQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA--RSRRDS 560

Query: 95   TADTYCKMILKLGLAG-NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA-MR 152
              ++ C +++ L +A  +++  + L  +  +    NV ++ +      V  Y+  G+  R
Sbjct: 561  NLESLC-IVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPR 619

Query: 153  VLVNMNSGGFKLSVDVFNVVL---GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN-YL 208
            V             DVF  VL   G + E +R       V+++M+  G+V +VD+ N YL
Sbjct: 620  VF------------DVFFQVLVDFGLLREARR-------VFEKMLNYGLVLSVDSCNVYL 660

Query: 209  LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
              +  +  +  +A+  FR   + G C N  ++ IVI  +    R+ ++  +L  M   G 
Sbjct: 661  TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 720

Query: 269  QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
              ++  Y+ ++   CR  +L++  +L ++M+   L P+   Y  +I  LC   +L +A +
Sbjct: 721  TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 780

Query: 329  ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
               +MI  G+ P   V+  ++ G C+ G                             A K
Sbjct: 781  AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA-------------------------ASK 815

Query: 389  FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
            FF       +M  R I  D  ++   I   C+  ++ +A +L   M    + PD  T++ 
Sbjct: 816  FFY------EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869

Query: 448  FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
             + G CK  + +DA RV   +       + ++Y+ L++GLC+   +  A E+   M K G
Sbjct: 870  LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929

Query: 508  CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
               +  ++N ++ GLC    +++A++L     ++G +  T TYT +M    K        
Sbjct: 930  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989

Query: 568  VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             +L +ML +G    +  + +L+        L+D     N M+  G+ P+  T  SL+   
Sbjct: 990  EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049

Query: 628  ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               + L   ++    + S     D   Y  L+ G  K     +A +L   M GKG+    
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 1109

Query: 688  TTHGLLV 694
            +T+ +L+
Sbjct: 1110 STYSVLI 1116



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 197/446 (44%), Gaps = 8/446 (1%)

Query: 146  RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDT 204
            R+  A  +L+ M   G+   V  ++ V+      + G  D V+   E++K  G+ PN   
Sbjct: 704  RIKEAHHLLLLMELKGYTPDVISYSTVVNGYC--RFGELDKVWKLIEVMKRKGLKPNSYI 761

Query: 205  LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
               ++ +L    ++  A + F  M ++G  P++  +  +I G      +  +     EM 
Sbjct: 762  YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821

Query: 265  DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
               I  ++  YT II   C+   + EA +LF  M    L PD +T+ ELIN  C+   + 
Sbjct: 822  SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881

Query: 325  DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
            DA  +   MI  G +P    +  ++ GLC+ G  D +   L +       P    +N+++
Sbjct: 882  DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941

Query: 381  ECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
               C +G    A K + E  A    AD  ++   +   C++ E+ KA E+L  M+   + 
Sbjct: 942  NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001

Query: 440  PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            P   T++  + G C     ED  ++   + A+ +  ++ +++ LV+  C    +  A  +
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061

Query: 500  FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
            +  M   G      ++  L+ G C  R + +A  L       G S + STY+ ++ G +K
Sbjct: 1062 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 1121

Query: 560  LQRAKDLLVVLAQMLVEGCALDVEAY 585
             ++  +   V  QM  EG A D E +
Sbjct: 1122 RKKFLEAREVFDQMRREGLAADKEIF 1147



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/446 (23%), Positives = 186/446 (41%), Gaps = 45/446 (10%)

Query: 81   KIFKWVSIQKR--FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
            K++K + + KR   +  +  Y  +I  L     + E E     M+++          +L+
Sbjct: 742  KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801

Query: 139  FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKE 192
              F     +  A +    M+S      V  +  ++      G +VE  +       ++ E
Sbjct: 802  DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-------LFHE 854

Query: 193  MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            M   G+ P+  T   L+    +   ++ A      M + GC PN  T+  +I GL     
Sbjct: 855  MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914

Query: 253  VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            +D +  +L EM+ +G+Q  +  Y  I+  LC+   +EEA++L     A  L  D +TY  
Sbjct: 915  LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974

Query: 313  LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
            L++  C++  +D A +IL++M+  GL PT   F  ++ G C  G  ++    L       
Sbjct: 975  LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN------ 1028

Query: 373  TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                            + LAK I          +  ++N  ++  C    ++ A  +   
Sbjct: 1029 ----------------WMLAKGI--------APNATTFNSLVKQYCIRNNLKAATAIYKD 1064

Query: 433  MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
            M    V PD  TY   V G CK  N ++A  +F+++  +   +   +YS L++G  + +K
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124

Query: 493  ITEAVEVFCCMSKNGCSLSSSSFNIL 518
              EA EVF  M + G +     F+  
Sbjct: 1125 FLEAREVFDQMRREGLAADKEIFDFF 1150



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 11/242 (4%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            TY  ++  L  +GN+EE   L                 +L+ ++     ++ A  +L  M
Sbjct: 936  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995

Query: 158  NSGGFKLSVDVFNVV-----LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
               G + ++  FNV+     L  ++E+     ++      M+  GI PN  T N L++  
Sbjct: 996  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW------MLAKGIAPNATTFNSLVKQY 1049

Query: 213  FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
               N +++A   ++ M  +G  P+ +T+E ++KG      + ++  +  EM   G  + +
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 1109

Query: 273  SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
            S Y+ +I    +  K  EA  +F  MR   L  D+  ++   +   +  R D   D +++
Sbjct: 1110 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDE 1169

Query: 333  MI 334
            +I
Sbjct: 1170 II 1171


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 248/551 (45%), Gaps = 42/551 (7%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R FA    ++ +M+++G+  +       +    E+  ++ A     RM  +G   ++  +
Sbjct: 177 RQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPY 236

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            +++ GL  N RV ++V +   M ++G+  +   Y  ++   CR  +LE A+R+   M  
Sbjct: 237 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIR 296

Query: 301 LDLMPDE-----------------------------------LTYEELINCLCENLRLDD 325
           L  +P E                                     Y  LI+ LC+N R DD
Sbjct: 297 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDD 356

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---NFLEDKCGYVT-SPHNALLE 381
           A+ + ++M   GL P +  +  ++  LC+ G  ++++   + + DK   VT  P+N+L+ 
Sbjct: 357 ADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLIN 416

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G    A+ +L  M    +    +   P I  LC N ++  A EL   M    +  
Sbjct: 417 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAW 476

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++A + G CK    ++A R+F ++   +++ + ++++ ++EG C V  I +A +++
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M + G    + ++  LI GLC+   V KA    +   +S       + T ++ GL + 
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFRE 596

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILI-QSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            R  +   +  +M V G  LD+ ++ I++  ++ + +K K C L F  M + G+ PD   
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL-FREMKEQGVKPDDIF 655

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              ++  L+    +    +  +++V D    ++  + +LIN L K G    A  L   ML
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 680 GKGWVPDATTH 690
               +P+  T+
Sbjct: 716 AGNVLPNKFTY 726



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 242/586 (41%), Gaps = 32/586 (5%)

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL-VNMNSGGFKLSVDVFNVVL 173
           M GLC+NM                       RV  A+ V  V +N G     V    +V 
Sbjct: 240 MYGLCKNM-----------------------RVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G    E+   A  + +  +M++ G VP+    +++++ L +   +E A     ++   G 
Sbjct: 277 GFCRMEELEMA--LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN   +  +I  L  N R DD+  +  EM   G++     Y  +I  LC+   +E+A+ 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LF  MR   +      Y  LIN  C+   LD A  +L  M+  GLTPT   +  ++ GLC
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 354 EVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
             G    ++       E    +      AL+   C   K   A  + +KM D  +   + 
Sbjct: 455 RNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I   C    IRKA++L  +MV   + PD  TY + + G C       A      +
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                VL++ S + L+ GL +  + TE   ++  M+  G  L   SF I++Y        
Sbjct: 575 ENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +K+  L       G       YT ++  L K +     L    QM+++G + +   + +L
Sbjct: 635 EKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVL 694

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I ++ +   L    L    M+   ++P++ T    L   A    +   +  ++  +    
Sbjct: 695 INNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME-KAKDLHSAMLQGH 753

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +     +NILI GL K G   +A  L+  +   G+ PD  ++  ++
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTII 799



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 136/544 (25%), Positives = 238/544 (43%), Gaps = 49/544 (9%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADF 186
           PNV  A  +L+     + R + A R+   M   G + +   + +++ A+   KRG   D 
Sbjct: 336 PNVF-AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC--KRGMIEDA 392

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M   GI   V   N L+    +   ++ A      M K+G  P + ++  +I G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  N  +  ++ +  EM + GI      +T +I   C++ K++EA RLF  M   +++P+
Sbjct: 453 LCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 307 ELTYEELIN--CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC---EVGKFDES 361
           E+T+  +I   CL  N+R   A  + + M+ +GL P +  +  ++ GLC    V K +E 
Sbjct: 513 EVTFNVMIEGYCLVGNIR--KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570

Query: 362 VNFLEDKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
           V  LE+    + +    ALL      G+F     + ++MA R +  D  S+ I +    +
Sbjct: 571 VADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             +  K+  L   M    V PD   Y+  +    K  N   AL  + Q+       ++++
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVT 690

Query: 480 YSKLVEGLCQVEKITEAVEVFC----------------C----------MSK-------- 505
           ++ L+  LC+   +  A E+ C                C          M K        
Sbjct: 691 HTVLINNLCKSGYLGSA-ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 506 -NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G   S  SFNILI GLC   K+ +AI L      SG S    +Y+ I+  L K+    
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
               +  +ML +G   DV AY I I+  +   +       +  M+++G+ P+ +T  +LL
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 625 HGLA 628
            G++
Sbjct: 870 SGIS 873



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/479 (22%), Positives = 212/479 (44%), Gaps = 13/479 (2%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G   N  T   ++  L+   +   +  +  +M   G+ L+   YT  I   C    L+ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L   M +  +    + Y  L+  LC+N+R+ +A ++   M+ IG+T  +  +  +V G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 352 LCEVGKFDESVNFLED--KCGYVTSPHNALLECCCNAGKFFLAKCILE------KMAD-R 402
            C + + + ++    D  + G+V S  N    C     +    + + E      K+ D  
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEAN----CSFMIDELRKKELVEEAFSLACKLGDLG 333

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + +  ++N  I  LC+NE    A  L   M    + P+  TY+  +   CK    EDAL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F ++  + + +    Y+ L+ G C+   +  A  +   M K G + +++S++ LI GL
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C    +  A+ L       G ++   T+T ++ G  K ++  +   +  +M+      + 
Sbjct: 454 CRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             + ++I+       ++     ++ MV+ GL PD  T  SL+ GL   S +   +  +  
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           L +   VL++     L+ GL++EG  ++  +L D M  +G   D  +  ++V +++ + 
Sbjct: 574 LENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/478 (20%), Positives = 202/478 (42%), Gaps = 59/478 (12%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G+++   GL   MVKE       +   L+     +  ++ AM +   
Sbjct: 416 NGYCKQ-------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHRE 468

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   F  ++    ++K+   +   ++ +M+ + ++PN  T N ++E      
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKK-MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS------------------------- 251
            I  A   + +M + G  P++ T+  +I GL   S                         
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 252 ----------RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                     R  ++  +  EM   G++L+L  +T I+    +++  E++  LF+ M+  
Sbjct: 588 ALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + PD++ Y  +I+ L +   +  A +  + M++ G +P       ++  LC+ G    +
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 362 V---------NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
                     N L +K  Y     N  L+     G    AK +   M    +A   S+NI
Sbjct: 708 ELLCKEMLAGNVLPNKFTY-----NCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNI 762

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I+ LC+  +I++A +L+ ++  S   PDC +YS  +   CK+ +   A  ++ ++  + 
Sbjct: 763 LIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 473 LVLDSISYSKLVEGLCQVEKITE-AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           L  D ++Y+  +   C V   ++ A+ ++  M ++G   +  ++  L+ G+ +M   D
Sbjct: 823 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 35/303 (11%)

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +LG  + S +  +  T S  +    K+  +  A  +F ++    + LD   Y+  +   C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   +  A  +   M   G   S+  +N+L+YGLC   +V +A+ ++++  + G +    
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQM-----------------------LVE--------- 576
           TY  ++ G  +++  +  L +   M                       LVE         
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 577 ---GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              G   +V AY  LI  + +  +  D    F  M   GL P+  T   L+H L     +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  +K+      +    YN LING  K+G   +A  LL  M+ +G  P A ++  L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 694 VGS 696
           +  
Sbjct: 450 IAG 452



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           KEM+   ++PN  T N  L+       +E A D    M  +G   +  +F I+IKGL   
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++ +++ ++ ++ + G   +   Y+ II  LC+   + +A  L+  M    L PD + Y
Sbjct: 771 GKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              I     +   D A  I  +MI  G+ P  D +  ++ G+  +  +D S
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 249/560 (44%), Gaps = 27/560 (4%)

Query: 117 GLCQ---NMVKERYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           G C+   NM+     N   +L  SLV S+ N      A ++L  M + G      V+N+ 
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218

Query: 173 LGAIV-EEKRGFADFV----FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +G+I  +EK    D +     +Y EM+ A  V N   +      L    + + A    + 
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KG  P++ T+  VI  L   ++V+ +  +  EM  +G+  ++  YT +I   C+   
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E+A  LF+ MR++   P  +TY  LI+   +  ++  ANDI   M+  G  P D  +  
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           +V GLC+ G   ++        G   S  +     C    +  LA  ++           
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC--EDRHTLAPNVV----------- 445

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   +  LC+  ++  A+ELL  M+ S   P+   Y A + G CK    + A  VF Q
Sbjct: 446 -TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++    +    +Y+ L++ + +  ++  A++V   M K+ C+ +  ++  +I GLC + +
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
            +KA++L SL    G S    TYT ++ GL K  +    L +  QM  +GC+ +   Y +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI-NKLVSD 646
           LI  +     L    L    M +       +     + G    S+  + S GI  ++ S 
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF---SKSFIASLGILEEMESY 681

Query: 647 SEVLDSSMYNILINGLWKEG 666
             V  + +Y +LI+   K G
Sbjct: 682 GTVPIAPVYGMLIDCFSKAG 701



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 244/585 (41%), Gaps = 48/585 (8%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+  F+   ++    R++  M + G   +  +FN ++ +   EK    D+ 
Sbjct: 140 PNVV-TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK----DYA 194

Query: 188 FVYK---EMVKAGIVPNVDTLNYLL------EVLFETNRIESALDQFRRMHKKGCCPNSR 238
           + YK    M   G  P     N  +      E L   + ++ A   +  M    C  N  
Sbjct: 195 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 254

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
                 + L    + D +  ++ EM   G   + S Y+ +I  LC   K+E+A  LF+ M
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           + + + PD  TY  LI+  C+   ++ A  + E+M  +G +PT   +  ++    +  + 
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
            ++ +           P    + AL++  C AG    A  +  K+    I   DS +   
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL----IGTSDSADSDF 430

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            + CE+                ++ P+  TY A V G CK    + A  +   + +    
Sbjct: 431 YFPCEDRH--------------TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + I Y  L++G C+  KI  A EVF  M+K G   S  ++  LI  +    ++D A+++
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            S       +    TYT ++ GL ++  ++  L +L+ M  +GC+ +V  Y  LI  + +
Sbjct: 537 LSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK 596

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLH-----GLADGSQLHLVSSGINKLVSDSEV 649
             K+      F  M + G  P+  T   L++     GL D ++L L   G  K     + 
Sbjct: 597 AGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL---GEMKQTYWPKY 653

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L    Y   I G  K  + S    +L+ M   G VP A  +G+L+
Sbjct: 654 LQG--YRCAIQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLI 694



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/589 (21%), Positives = 222/589 (37%), Gaps = 87/589 (14%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPN------------------ 201
           G++ S   +N ++  +     G  D  F V KEM ++G   +                  
Sbjct: 35  GYRPSKVTYNALVQVL--SSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 202 ------------VDTL--NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
                       +DT+   +++  L E +  + A+    RM    C PN  T+  ++ G 
Sbjct: 93  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           +   ++     I+  M   G     S +  ++   C E     A +L   M      P  
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 308 LTYEELINCLCENLR------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           + Y   I  +C   +      LD A  I  +M+            +  R LC VGKFD++
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
              ++                              E M    + D  +++  I +LC   
Sbjct: 273 FQLIK------------------------------EMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ KA+ L   M +  V PD  TY+  +   CK    E A  +F ++ +       ++Y+
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+    + +++ +A ++F  M   GC  +  ++  L+ GLC    + KA  + +    +
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 542 GTSYTTS----------------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             S  +                 TY  ++ GL K  +      +L  ML  GC  +   Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    +  K+      F  M K G +P   T  SL+  +    +L L    +++++ 
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           DS   +   Y  +I+GL + G + +A  LL LM  KG  P+  T+  L+
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 226/527 (42%), Gaps = 29/527 (5%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-V 123
           +  R L        A ++ K + ++K F     TY K+I  L  A  VE+   L Q M +
Sbjct: 258 NFARCLCGVGKFDKAFQLIKEM-MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A  +   M S G   +V  +  ++ A ++ K+  
Sbjct: 317 VGVTPDVYTYTI-LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-V 374

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM--------------- 228
                ++  MV AG  PN  T   L++ L +   I  A + + ++               
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 229 -HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
             +    PN  T+  ++ GL    +VD +  +L  M   G +     Y  +I   C+  K
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A  +F  M     +P   TY  LI+ + ++ RLD A  +L  M+    TP    +  
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC +G+ ++++  L    E  C      + AL++    AGK  L+  +  +M+ + 
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + +  ++ + I  LC    + KA  LLG M  +        Y   + G  K  ++  +L
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASL 672

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS--FNILIY 520
            +  ++ +   V  +  Y  L++   +  ++  A+E+   M +   S+ + +  +  LI 
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            LC+  +V++A RL S     G     S +  ++ GLV++++  + L
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 164/369 (44%), Gaps = 41/369 (11%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE-KRGFADFVFVYKEMV 194
           +LV      ++V+ A  +L  M S G + +  V++ ++    +  K   A  VF+  +M 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL--QMT 506

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K G +P+V T   L++ +F+  R++ A+    +M K  C PN  T+  +I GL      +
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ +L  M + G    +  YT +I  L +  K++ ++ LF  M      P+ +TY  LI
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N LC    LD A  +L +M           +   ++G  +   F  S+  LE+   Y T 
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTV 684

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
           P    +  L++C   AG+  +A  + ++M +                             
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMME----------------------------- 715

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
              V SSV  D   Y++ +   C     E+A R++ +++ +  V +   +  L++GL +V
Sbjct: 716 ---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEV 772

Query: 491 EKITEAVEV 499
           +K  EA+++
Sbjct: 773 KKWDEALQL 781



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 49/311 (15%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D +CK       AG ++  + +   M K  Y        SL+       R++ AM+VL  
Sbjct: 487 DGFCK-------AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539

Query: 157 MNSGGFKLSVDVFNVVLGA---IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           M       +V  +  ++     I E ++       +   M + G  PNV T   L++ L 
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALK----LLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM---------- 263
           +  +I+ +LD F +M +KGC PN  T+ ++I  L A   +D +  +LGEM          
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 264 --------------FDLGIQLELSFYTCI---------IPMLCRENKLEEAIRLFKMMRA 300
                           LGI  E+  Y  +         I    +  +LE A+ L K M  
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 301 L--DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +   +  D   Y  LI  LC   ++++A  +  +M   G  P   VFV +++GL EV K+
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 359 DESVNFLEDKC 369
           DE++      C
Sbjct: 776 DEALQLCYGIC 786



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 9/294 (3%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  ++ L    ++   + +   M  S    D  T   F    CK   + DAL +  + 
Sbjct: 42  TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER- 100

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +   LD++  + ++ GL +     EA+     M  N C  +  ++  L+ G    +++
Sbjct: 101 --EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 158

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
               R+ ++  + G +   S +  ++      +       +L +M   GC      Y I 
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218

Query: 589 IQSMSEQNKLKDCALF------FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
           I S+  Q KL    L       +  M+ A  V ++  + +    L    +       I +
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           ++    V D+S Y+ +I  L       +A  L   M   G  PD  T+ +L+ S
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 3/195 (1%)

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G   S  ++N L+  L    +VD   R++     SG      T       L K  R  D 
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L ++ +   E   LD      +I  + E +   +   F + M     +P+  T  +LL G
Sbjct: 95  LDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                QL      IN ++++    + S++N L++    E   + A  LL+ M   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 687 ATTHGLLVGSSVGEE 701
              + + +GS  G+E
Sbjct: 212 YVVYNIFIGSICGQE 226


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 253/546 (46%), Gaps = 18/546 (3%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           SV VF++++  +        + V V+ +  K G+  +  + N+LL+ L E NR E     
Sbjct: 178 SVIVFDLLI-KVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSL 236

Query: 225 FRRMHKKGCCPNSRTFEIVI----KGLIANSRVD--DSVSILGEMFDLGIQLELSFYTCI 278
           F  M   G  PN  T+ I++    KG    + +D   +  IL EM   G    +  Y+  
Sbjct: 237 FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTY 296

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LCR   +E A+   + + + + + +   Y  +I+ LC+   LD+A  +LE+M   G+
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
           +P    +  ++ G C+ G  ++ +  +E+       P    +++L    C   K  L+  
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLC---KKRLSDI 413

Query: 395 ILEKMADRKIA----DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            L+   D   A    D  +++I I+  C   ++  A++L+  MV +++ PD + + + V 
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK+  + +AL  F  +    ++    + + +++  C+  ++ EA+ +   M   G   
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP 533

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++N +I  LC  RK ++A+ L  L        +   Y+ ++ G  K   ++  L++ 
Sbjct: 534 NLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLY 593

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           A+ML  G   D+ AY ILI  +  ++++ +    F  M + G+ PD+ +  S++ G    
Sbjct: 594 ARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRI 653

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             +    +  N+++    +     Y  L++G  K      A  L+D M  KG  PD  T+
Sbjct: 654 GDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTY 713

Query: 691 GLLVGS 696
            +L+ +
Sbjct: 714 NVLIAA 719



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 252/574 (43%), Gaps = 19/574 (3%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK-LGLAGNVEEMEGLCQNM 122
           D LI+V    + L +A+ +F  +  +K     +   C  +LK L  A   E +  L + M
Sbjct: 183 DLLIKVFAANSMLENAVDVF--LQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEM 240

Query: 123 VKE-RYPNVREALISLVFSFVNHY-----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
                 PNV    I + F    ++         A  +L  M   G   +V  ++  +  +
Sbjct: 241 KSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGL 300

Query: 177 --VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
             V       DFV   + ++ A  + NV   N ++  L +   ++ AL     M   G  
Sbjct: 301 CRVGYVESALDFV---RSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+  T+ I+I G      V+  + ++ EM    ++  L  Y+ +   LC++   + ++ +
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           F+ + A     D+  Y  LI   C    LD A+ ++E+M+   L P    F  +V G C+
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 355 VGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
           +G +  ++ F    LE       +  N +++  C  G+   A  ++ +M  + I  +  +
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I  LC+  +  +A EL   M+  +V+P    YS  + G  K  N + AL ++ ++ 
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARML 597

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
              +  D ++Y+ L+  LC   ++ EA  +F  M++NG +    S+  +I G C +  + 
Sbjct: 598 KIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMR 657

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           KA  L +     G   T  TYT ++ G  K+ R     +++ +M  +G   DV  Y +LI
Sbjct: 658 KAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLI 717

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            +   +  L       N M + G++PD  T + L
Sbjct: 718 AAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 151/654 (23%), Positives = 277/654 (42%), Gaps = 66/654 (10%)

Query: 63  PDHLIRVLDNT-NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           P  L+RVL+   N    AL+ F+W   Q  F+ +  +Y  ++  L   G +     + + 
Sbjct: 47  PKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEK 106

Query: 122 MVKERY---------------PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           +V  +                P+V+  L  L++ +V    +   + V   M S G    V
Sbjct: 107 VVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDV 166

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
              N VL  + +          VY  MV+ GI P V T N +L+   +   ++ AL    
Sbjct: 167 KNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLF 226

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M   GC PN  T+ +++ GL  +  ++ +  ++ +M  LG+++ +  Y  +I   C + 
Sbjct: 227 QMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKG 286

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           ++EEA RL + M +   +P  +TY  ++  LC+  R+ DA  +L+ M+   L P    + 
Sbjct: 287 QIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYN 346

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++ G   +G   E+     +      +P    +N L++  C  G   +A  + ++M   
Sbjct: 347 TLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKH 406

Query: 403 KI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
               D  ++   +R  C+   +  A EL   M+   + PD   Y   ++G+ KL +   A
Sbjct: 407 GPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA 466

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             +  ++ A+    D I+Y+  ++GL ++  + EA E+   M  NG              
Sbjct: 467 FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV------------ 514

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                                 +YT+  +  +M G ++  RA     +  +ML +G    
Sbjct: 515 ------------------PDHVTYTSIIHAHLMAGHLRKARA-----LFLEMLSKGIFPS 551

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           V  Y +LI S + + +LK   L F  M + G+ P+  T  +L++GL    ++    +   
Sbjct: 552 VVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFA 611

Query: 642 KLVSDSEVLDSSMYNILIN-----GLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           ++ +     +   Y ILIN     G W+E L      L   ML +   PD+ TH
Sbjct: 612 EMQAKGISPNKYTYTILINENCNLGHWQEALR-----LYKDMLDREIQPDSCTH 660



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 120/286 (41%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  +   C+   +++A +LL +M      P+  TY+  V G       E A  + + +
Sbjct: 204 TYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDM 263

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               L +   +Y  L+ G C+  +I EA  +   M   G   +  ++N ++YGLC   +V
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A +L  +  +        +Y  ++ G  +L    +  ++ A++     A  V  Y  L
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  +     L       + M+K G  PD  T  + + G      L +     +++++   
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             D   Y   I G  K G  S+A  + + ML +G+ PD  T+ + +
Sbjct: 444 QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 489



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 5/223 (2%)

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           L  D F  +   + E K G     F + +EM+  G  P++ T N  ++ L +   ++ A 
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           +  ++M   G  P+  T+  +I   +    +  + ++  EM   GI   +  YT +I   
Sbjct: 503 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSY 562

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
               +L+ AI  F  M    + P+ +TY  LIN LC+  ++D A +   +M   G++P  
Sbjct: 563 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNK 622

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
             +  ++   C +G + E++   +D       P    H +LL+
Sbjct: 623 YTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK 665



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 1/149 (0%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EM+  GI P+V T   L+       R++ A+  F  MH+KG  PN  T+  +I GL 
Sbjct: 539 LFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 598

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              ++D + +   EM   GI      YT +I   C     +EA+RL+K M   ++ PD  
Sbjct: 599 KVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSC 658

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIG 337
           T+  L+  L ++ +L      LE++I  G
Sbjct: 659 THRSLLKHLNKDYKLHVVRH-LENVIAAG 686



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%)

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D A  + ++    G   T  TY  ++    K    ++ L +L QM   GC+ +   Y +
Sbjct: 183 IDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNV 242

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           L+  +S   +++        M++ GL     T   L+ G  +  Q+   S    +++S  
Sbjct: 243 LVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRG 302

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            V     YN ++ GL K G  S A  LLD+M+ K  +PD  ++  L+
Sbjct: 303 AVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLI 349



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 112/240 (46%), Gaps = 7/240 (2%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK-ITEAVEVFCCMSKNGCSLSSSSFNI 517
           E  L VF ++ ++ L+ D  + ++++  L   +  I  A EV+  M + G   +  ++N 
Sbjct: 148 EKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNT 207

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQML 574
           ++   C    V +A++L     + G S    TY  ++ GL    ++++AK+L+     ML
Sbjct: 208 MLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELI---QDML 264

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G  + V  Y  LI+   E+ ++++ +     M+  G VP   T  ++++GL    ++ 
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVS 324

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                ++ +V+ + + D   YN LI G  + G   +A  L   +  +   P   T+  L+
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLI 384


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 167/704 (23%), Positives = 293/704 (41%), Gaps = 89/704 (12%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           ++S     +E ++++L  +L P  +  VL + +D   ALK F W   Q R++H    Y  
Sbjct: 156 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYS 215

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+        V     +CQ                            GA RVLV M   G
Sbjct: 216 ML-------EVLSKTKMCQ----------------------------GARRVLVLMKRRG 240

Query: 162 FKLSVDVFNVVLGAIVEEKRG--FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
              + + F   L  +V   R     D + V   M +AG+ PN+   N  ++V    NR+E
Sbjct: 241 IYRTPEAF---LRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLE 297

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCI 278
            AL    RM   G  PN  T+  +I+G     RV++++ +L +M   G +  ++S+YT I
Sbjct: 298 KALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYT-I 356

Query: 279 IPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +  LC+E ++ E   L  KM +   L+ D++TY  LI+ L ++   D+A   L+D     
Sbjct: 357 MGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDA---- 412

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
                                 E   F  DK GY     +A++   C  G+   AK ++ 
Sbjct: 413 ----------------------EEKGFRIDKVGY-----SAIVHALCKEGRMSEAKDLIN 445

Query: 398 KMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +M  +     D  ++   +   C   E+ KA +LL  M      P+  +Y+A + G C+ 
Sbjct: 446 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRT 505

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               +A  +      Q    +SI+YS L+ GL +  K++EA +V   M   G        
Sbjct: 506 GKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEI 565

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N+L+  LC   +  +A +      + G +     +T ++ G  +       L VL  M +
Sbjct: 566 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 625

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
                DV  Y  L+ ++ ++ ++ +       M+  G+ P   T  +++H      ++  
Sbjct: 626 INKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDD 685

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-HGLLV 694
           + + + K++   +    ++YN +I  L   G   +A  LL  +L      DA T + L+ 
Sbjct: 686 LVAILEKMILRQKC--KTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALME 743

Query: 695 GS-SVGEEIDSRRFA---FDSSSFPDS------VSDILAEGLGN 728
           G   +G  + + + A   F+ +  PD          ++ EG GN
Sbjct: 744 GYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGN 787


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 196/445 (44%), Gaps = 33/445 (7%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P + TF  V  G     R++    +   M + G  L  S Y  +I  LC+    +EA +L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              MR        + Y  +IN LC+  R+++A +++E M      P    +  IV  LC+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126

Query: 355 VGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
             + D+++                                 +E+MA R I  D   +N  
Sbjct: 127 TKRIDDAL-------------------------------ATVEEMATRGIKPDAFIYNFV 155

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +  LC+ E++ +A  L  +MV   + P+  TY+  + G CK    E A  +F++++ +  
Sbjct: 156 LSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 215

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           V   +SY+ L++G C+ + +  A +VF  M ++ C  +  ++  LI GL    KV  A  
Sbjct: 216 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAE 275

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +       G +   +TY+ ++ G  K++R  +   +L QM+ +G A  V  Y IL+ S+ 
Sbjct: 276 VLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC 335

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
             +KL+D    F  M +    P   T  +LL  L    QL        ++++     D+ 
Sbjct: 336 RADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAI 395

Query: 654 MYNILINGLWKEGLTSQASYLLDLM 678
            Y+ L  GL + G   +A  L++ M
Sbjct: 396 TYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 201/447 (44%), Gaps = 33/447 (7%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           ++P   T N + +   +  R+E   + ++ M + G    +  + I+I  L      D++ 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +L  M     + +   Y+ II  LC+ N++EEA  L + M A    PD LTY  ++  L
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERL 124

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C+  R+DDA   +E+M   G+ P   ++  ++ GLC+  K +E                 
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE----------------- 167

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
                         A+ + EKM  ++I  +  ++N  I  LC+   I  AYEL   M   
Sbjct: 168 --------------ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK 213

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
             VP   +Y+  + G CK  +   A  VF ++   + V + ++Y+ L++GL +  K+  A
Sbjct: 214 GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAA 273

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            EV   M K G + + ++++ LI G C +R+VD+A +L     + G + T  TY  ++  
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 333

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L +  + +D   +   M    C   V  Y  L++++    +L      +  M+  G  PD
Sbjct: 334 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPD 393

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKL 643
             T  +L  GL    ++H     + K+
Sbjct: 394 AITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 189/418 (45%), Gaps = 71/418 (16%)

Query: 189 VYKEMVKAGI----------------VPNVDTLNYLLEV-------------------LF 213
           VY+ MV+AG                 V N D    LL                     L 
Sbjct: 32  VYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLC 91

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           + NR+E A +   +M +    P++ T+  +++ L    R+DD+++ + EM   GI+ +  
Sbjct: 92  KLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAF 150

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  ++  LC+E K+EEA  LF+ M    + P+ +TY  LIN LC+  R++ A ++ ++M
Sbjct: 151 IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 210

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
              G  PT+                                 +N L++  C       AK
Sbjct: 211 AGKGYVPTE-------------------------------VSYNTLIDGFCKKKDLVAAK 239

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + +KM     + +  ++   I  L ++ +++ A E+L  MV   V P+ ATYS  + G 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK+   ++A ++  Q+  Q +    ++Y+ L+  LC+ +K+ +A ++F  M++  C  + 
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLL 567
            ++N L+  LC  +++D A RL +   + G      TY  +  GL    K+  A++L+
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 185/433 (42%), Gaps = 43/433 (9%)

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           ++P   T+  + +   +  RL+   ++ + M+  G T     +  ++  LC+VG FDE+ 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
             L          H   L       K F  K I             +++  I WLC+   
Sbjct: 66  KLL----------HTMRL-------KRFKRKAI-------------AYSTIINWLCKLNR 95

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A EL+ +M      PD  TY   V   CK    +DAL    +++ + +  D+  Y+ 
Sbjct: 96  VEEARELIEKMA-RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++ GLCQ EK+ EA  +F  M K   + +  ++N LI GLC   +++ A  L       G
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLV---VLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
              T  +Y  ++ G  K    KDL+    V  +M+   C  +V  Y  LI  +S+  K++
Sbjct: 215 YVPTEVSYNTLIDGFCK---KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQ 271

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
             A   + MVK G+ P+  T   L+ G     ++      + ++V+         YNIL+
Sbjct: 272 AAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILL 331

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVGEEIDS--RRFA--FDSSSF 714
           N L +      A  L   M  +   P   T+  LL      +++D   R +A        
Sbjct: 332 NSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCP 391

Query: 715 PDSVS-DILAEGL 726
           PD+++ D LA GL
Sbjct: 392 PDAITYDTLAWGL 404



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 9/260 (3%)

Query: 111 NVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
            VEE   L + MVK+R  PNV     +L+      +R+  A  +   M   G+  +   +
Sbjct: 164 KVEEARLLFEKMVKQRINPNV-VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY 222

Query: 170 NVVLGAIVEEKRGFADFVF---VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           N ++    ++K    D V    V+ +MV++  VPNV T   L++ L ++ ++++A +   
Sbjct: 223 NTLIDGFCKKK----DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 278

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M KKG  PN  T+  +I G     RVD++  +L +M   GI   +  Y  ++  LCR +
Sbjct: 279 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 338

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           KLE+A +LF+ M      P  +TY  L+  LC + +LD A+ +  +MI  G  P    + 
Sbjct: 339 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398

Query: 347 DIVRGLCEVGKFDESVNFLE 366
            +  GL   GK  E+   +E
Sbjct: 399 TLAWGLTRAGKVHEAQELME 418



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 163/389 (41%), Gaps = 39/389 (10%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L    +   A K+   + + KRF+  A  Y  +I  L     VEE   L + M + 
Sbjct: 51  LISCLCKVGNFDEAYKLLHTMRL-KRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY 109

Query: 126 RYPNVREALI--SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
             P+   AL    +V       R++ A+  +  M + G K    ++N VL  + +E++  
Sbjct: 110 APPD---ALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK-V 165

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            +   ++++MVK  I PNV T N L+  L +  RIE+A + F+ M  KG  P   ++  +
Sbjct: 166 EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 225

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I G      +  +  +  +M        +  YT +I  L +  K++ A  +   M    +
Sbjct: 226 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 285

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+  TY  LI+  C+  R+D+A+ +LE M+  G+ PT   +                  
Sbjct: 286 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTY------------------ 327

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                        N LL   C A K   A  +   MA R+      ++N  +R LC +++
Sbjct: 328 -------------NILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 374

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           +  A+ L   M+     PD  TY     G
Sbjct: 375 LDGAHRLYAEMIAKGCPPDAITYDTLAWG 403



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 5/264 (1%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M +  V+P  AT++    G  K    E    V++ +      L +  Y  L+  LC+V  
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL--RSLAYSSGTSYTTSTY 550
             EA ++   M        + +++ +I  LC + +V++A  L  +   Y+   +    TY
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDAL---TY 117

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+  L K +R  D L  + +M   G   D   Y  ++  + ++ K+++  L F  MVK
Sbjct: 118 GPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK 177

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
             + P+  T  +L++GL    ++        ++     V     YN LI+G  K+     
Sbjct: 178 QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVA 237

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A  + D M+    VP+  T+  L+
Sbjct: 238 AKDVFDKMVRSNCVPNVVTYTTLI 261



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 2/178 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     +L+       +V  A  VL  M   G   +V  ++ ++    + +R   +  
Sbjct: 252 PNV-VTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR-VDEAH 309

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            + ++MV  GI P V T N LL  L   +++E A   FR M ++ C P   T+  +++ L
Sbjct: 310 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
             + ++D +  +  EM   G   +   Y  +   L R  K+ EA  L + M+     P
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 145/632 (22%), Positives = 276/632 (43%), Gaps = 51/632 (8%)

Query: 138 VFSFVNHYRVNG-AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           V + + H R  G A+     + +  FK  V  +N +L  ++   R       V+++MV  
Sbjct: 100 VGAVIKHLRDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRH-RDLKQAGQVFEKMVAQ 158

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+VPN  T   L++        + A+  F  M  KG  P+S  ++ V + L A  +  + 
Sbjct: 159 GVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEF 218

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             + G   +  + +E+     ++     ++K  EA +LF+ M      PD   Y  ++  
Sbjct: 219 SRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLA 278

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDES-------------- 361
            C+   LD+A  +  +M V    P ++V +   + GLC+ GK +++              
Sbjct: 279 HCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSS 338

Query: 362 ----------------VNFLEDKC----GYVTSPH----NALLECCCNAGKFFLAKCILE 397
                           ++  E+ C    G    P     +++++  C AG+   A  +LE
Sbjct: 339 QPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLE 398

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM--VVSSVVPDCATYSAFVLGKCK 454
            M  R    D  + ++ I  LC+ ++I++A E L  M   +SS    C +Y++ +   CK
Sbjct: 399 TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCK 458

Query: 455 LCNYEDALRVFRQ-VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                 A  +F   VS +S V D +SYS L++G C+++++  A +++  M    C  + +
Sbjct: 459 AKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVT 518

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N  + GL    ++  A  +     ++G S    TY+ ++ G    ++      +   M
Sbjct: 519 TYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETM 578

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           +  GC  +   Y  L+  + +++K  +    F  MV+ G  PDR T  +LL+G  +  ++
Sbjct: 579 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  +++VS     D   YN L+ G ++ G   +A  L  +M+ +   PD  +H ++
Sbjct: 639 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIM 698

Query: 694 V-GSSVGEEIDS-----RRFAFDSSSFPDSVS 719
           + G S  + +D       R   D    PD V+
Sbjct: 699 IDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 730



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 160/652 (24%), Positives = 272/652 (41%), Gaps = 56/652 (8%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY- 127
           V+ +  D   AL  F+W+   + F+H   TY  ++ KL    ++++   + + MV +   
Sbjct: 103 VIKHLRDGGEALTFFRWLQA-RNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVV 161

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV---LGAIVEEKRGFA 184
           PN     + LV S       + A+R    M   GFK S  ++  V   L A  +E     
Sbjct: 162 PNGFTYAV-LVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE----G 216

Query: 185 DFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           +F  V+ +++ K   V  +     L+  + +   IE++   FR M K GC P++  +  +
Sbjct: 217 EFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS-KLFRAMVKSGCKPDATIYSYM 275

Query: 244 IKGLIANSRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR--- 299
           +        +D++  +  EM  +    L    +T  +  LC+  K+E+A    + M+   
Sbjct: 276 VLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESL 335

Query: 300 -------------------------------ALDLMPDELTYEELINCLCENLRLDDAND 328
                                            ++ P   T   +I  LC+  R+D A  
Sbjct: 336 SSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALS 395

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLEC 382
           +LE MI  G  P       ++  LC+  K  E+  FL+               +N+LL  
Sbjct: 396 LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNS 455

Query: 383 CCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
            C A K   A  I   M   +  + D  S++I I   C+ +E+ +A +L  +M+  + VP
Sbjct: 456 LCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 515

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  TY+AF+ G  +     DA  V+ ++ A     D I+YS L+ G     K  +A E+F
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M   GC  ++ ++N L++GLC   K D+A  L       G      TYT ++ G   +
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNV 635

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            + +  + V  +M+ +G   DV AY  L++      K  +    F VMV     PD  + 
Sbjct: 636 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSH 695

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQA 671
             ++ GL+   +L        ++  D     D   YN LI GL  E   S+A
Sbjct: 696 NIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 197/434 (45%), Gaps = 9/434 (2%)

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L+ +L E+ RI+ A +    +  +   P+S T   VI+ L    RVD ++S+L  M  
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRL 323
            G   +++ ++ +I  LC+ +K++EA    + M  +         +Y  L+N LC+  ++
Sbjct: 403 RGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462

Query: 324 DDANDILEDMIV-IGLTPTDDVFVDIVRGLC---EVGKFDESVNFLED-KCGYVTSPHNA 378
             A  I   M+      P    +  ++ G C   E+G+ ++    + D  C    + +NA
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 522

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
            L      G+   A+ + E+M     + D  +++  I       +  +A+EL   M+   
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P+  TY+  + G CK    ++A  +FR++  +    D ++Y+ L+ G C V KI +AV
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           EVF  M   G      ++N L+ G     K  +A +L  +  S      T ++  ++ GL
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702

Query: 558 VKLQRAKDLLVVLAQMLVE-GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
            K +R  D + V  +M  + GC+ D+  Y  LI  +  + +L +    F  + +  L PD
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762

Query: 617 RETMLSLLHGLADG 630
                 LL  +  G
Sbjct: 763 PHAFNVLLEAIKCG 776



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 194/432 (44%), Gaps = 9/432 (2%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           D LIR+L  +  +  A +    ++  +  Q ++ T   +I +L  AG V+    L + M+
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIA-GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMI 401

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSG--GFKLSVDVFNVVLGAIVEEKR 181
           K  Y         L+       ++  A   L  M+        S   +N +L ++ + K+
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
               F      + +   VP+V + + L++   + + +  A   +++M    C PN  T+ 
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
             + GL+   R+ D+  +  EM   G   ++  Y+ +I       K ++A  LF+ M + 
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+ +TY  L++ LC+  + D+A+++   M+  G  P    +  ++ G C VGK +++
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
           V   ++       P    +N LL+    AGK   AK + + M  R+   D  S NI I  
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701

Query: 417 LCENEEIRKAYELLGRMVV-SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
           L + + +  A E+  RM       PD  TY++ + G C      +A++VF+++    L  
Sbjct: 702 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761

Query: 476 DSISYSKLVEGL 487
           D  +++ L+E +
Sbjct: 762 DPHAFNVLLEAI 773



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/478 (21%), Positives = 217/478 (45%), Gaps = 29/478 (6%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           +L  A K+F  ++++ +       +   +  L  +G +E+    C+ M +E   + +   
Sbjct: 284 NLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVY 342

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEM 193
             L+   +   R++ A    + +     + S    + V+  +   K G  D    + + M
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELC--KAGRVDSALSLLETM 400

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK--GCCPNSRTFEIVIKGLIANS 251
           +K G  P++ T + L+  L + ++I+ A +  + M +K      +  ++  ++  L    
Sbjct: 401 IKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAK 460

Query: 252 RVDDSVSILGEMFDLGIQLELSF------YTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           +V  + +I   M       E SF      Y+ +I   C+ ++L  A +L+K M  L+ +P
Sbjct: 461 KVHQAFAIFSTMVS-----ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 515

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +  TY   +N L    R+ DA  + E+M+  G +P    +  ++ G     K D++    
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWL 417
           E        P    +N LL   C   K   A  +  KM +R    CD    ++   +   
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER---GCDPDRVTYTTLLYGF 632

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C   +I +A E+   MV     PD   Y+  + G  +     +A ++F+ + ++    D+
Sbjct: 633 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDT 692

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           +S++ +++GL + +++ +AVEVF  M ++ GCS    ++N LI+GLC  +++ +A+++
Sbjct: 693 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 750


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 231/509 (45%), Gaps = 14/509 (2%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD--- 254
           + PN  T   ++  L    RI  AL     M ++GC P    + ++++   A SR     
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEA--ACSRGGGGG 168

Query: 255 --DSVSILGEMFDLGIQLELSFYTCIIPMLCREN-KLEEAIRLFK-MMRALDLMPDELTY 310
              +V +L ++   G  L++     ++  +C +   ++EA+RL + +  +    PD ++Y
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             ++  LC   R     D++E+M+ +G  P    F  ++  LC  G F+     L     
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           +  +P    +  +L+  C  G   +A  IL++M    +  +   +N  ++ LC  E   +
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A ELL  M  +    D  T++  V   C+       + +  Q+     V D I+Y+ ++ 
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G C+   I EAV +   M+  GC  ++ S+ I++ GLC   +   A  L S     G S 
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              T+  ++  L K    +  + +L QML+ GC+ D+ +Y  +I  + +  K  +     
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           NVMV  G+ P+     S+   L+   +++ V    + +   +   D+ +YN +I+ L K 
Sbjct: 529 NVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKR 588

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G T +A   L  M+  G +P+ +T+ +L+
Sbjct: 589 GGTDRAIEFLAYMVSSGCMPNESTYTILI 617



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 239/516 (46%), Gaps = 17/516 (3%)

Query: 181 RG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVL---FETNRIESALDQFRRMHKKGCCPN 236
           RG  AD + V  EM + G  P     + +LE            SA+   + +H +GC  +
Sbjct: 128 RGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALD 187

Query: 237 SRTFEIVIKGLI-ANSRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
                +V+  +      VD+++ +L ++    G   ++  Y  ++  LC   +      L
Sbjct: 188 VGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDL 247

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            + M  +   P+ +T+  LI  LC N   +  + +L  M+  G TP   ++  ++ G+C+
Sbjct: 248 MEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCK 307

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-- 408
            G  + +   L+    Y   P    +N +L+  C+A ++  A+ +L +M D    DC   
Sbjct: 308 EGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDN---DCPLD 364

Query: 409 --SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++NI + + C+N  + +  ELL +M+    VPD  TY+  + G CK    ++A+ + +
Sbjct: 365 DVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLK 424

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            ++A     ++ISY+ +++GLC  E+  +A ++   M + GCS +  +FN +I  LC   
Sbjct: 425 SMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKG 484

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            V++AI L      +G S    +Y+ ++ GL K  +  + L +L  M+ +G + +   Y 
Sbjct: 485 LVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 544

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            +  ++S++ ++      F+ +    +  D     +++  L            +  +VS 
Sbjct: 545 SIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSS 604

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
             + + S Y ILI GL  EG   +A  +L  +  KG
Sbjct: 605 GCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 204/437 (46%), Gaps = 7/437 (1%)

Query: 147 VNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           V+ A+R+L ++  S G    V  +N VL  +   KR +     + +EMV+ G  PNV T 
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKR-WGRVQDLMEEMVRVGCPPNVVTF 263

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L+  L      E       +M   GC P+ R +  V+ G+     ++ +  IL  M  
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G++  +  Y  ++  LC   + E+A  L   M   D   D++T+  L++  C+N  +  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLE 381
             ++LE M+  G  P    +  ++ G C+ G  DE+V  L+      C   T  +  +L+
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C+A ++  A+ ++ +M ++  +    ++N  I +LC+   + +A ELL +M+++   P
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSP 503

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  +YS  + G  K    ++AL +   +  + +  ++I YS +   L +  +I   +++F
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMF 563

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +        +  +N +I  LC     D+AI   +   SSG     STYT ++ GL   
Sbjct: 564 DNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASE 623

Query: 561 QRAKDLLVVLAQMLVEG 577
              K+   +L ++  +G
Sbjct: 624 GFVKEAQEMLTELCSKG 640



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 128/561 (22%), Positives = 233/561 (41%), Gaps = 40/561 (7%)

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE---RYPN 129
              L+SA ++   V +       A TY  ++  L   G + +   +   M +      P 
Sbjct: 96  AGQLASARRLAASVPVPP----NAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPP 151

Query: 130 VREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFV 189
           +   ++    S         A+RVL +++  G  L V   N+VL A+ ++     + + +
Sbjct: 152 MYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRL 211

Query: 190 YKEMVKA-GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            +++  + G  P+V + N +L+ L    R     D    M + GC PN  TF  +I  L 
Sbjct: 212 LRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLC 271

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            N   +    +L +M D G   ++  Y  ++  +C+E  LE A  +   M +  L P+ +
Sbjct: 272 RNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVV 331

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  ++  LC   R + A ++L +M      P DDV  +I+            V+F    
Sbjct: 332 CYNTVLKGLCSAERWEQAEELLAEMF-DNDCPLDDVTFNIL------------VDFF--- 375

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
                          C  G  +    +LE+M +   + D  ++   I   C+   I +A 
Sbjct: 376 ---------------CQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV 420

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            LL  M      P+  +Y+  + G C    + DA  +  Q+  Q    + ++++ ++  L
Sbjct: 421 MLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFL 480

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+   + +A+E+   M  NGCS    S++ +I GL    K D+A+ L ++  + G S  T
Sbjct: 481 CKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 540

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             Y+ I   L K  R   ++ +   +       D   Y  +I S+ ++        F   
Sbjct: 541 IIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAY 600

Query: 608 MVKAGLVPDRETMLSLLHGLA 628
           MV +G +P+  T   L+ GLA
Sbjct: 601 MVSSGCMPNESTYTILIRGLA 621



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/461 (22%), Positives = 195/461 (42%), Gaps = 48/461 (10%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++   CR  +L  A RL     ++ + P+  TY  ++  LC   R+ DA  +L++M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAA---SVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 335 VIGLTPTDDVFVDIVRGLC---------------------------------------EV 355
             G  P   ++  I+   C                                       + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 356 GKFDESVNFLED-----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
           G  DE++  L D      C      +NA+L+  C A ++   + ++E+M       +  +
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I +LC N    + +++L +MV     PD   Y+  + G CK  + E A  +  ++ 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           +  L  + + Y+ +++GLC  E+  +A E+   M  N C L   +FNIL+   C    V 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           + I L       G      TYT ++ G  K     + +++L  M   GC  +  +Y I++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           + +    +  D     + M++ G  P+  T  ++++ L     +      + +++ +   
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            D   Y+ +I+GL K G T +A  LL++M+ KG  P+   +
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 543



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/455 (22%), Positives = 185/455 (40%), Gaps = 33/455 (7%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
           V D    +  AL++ + +           +Y  ++  L +A     ++ L + MV+   P
Sbjct: 198 VCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCP 257

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
                  +L+     +       +VL  M   G    + ++  VL  + +E  G  +   
Sbjct: 258 PNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKE--GHLEVAH 315

Query: 189 -VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +   M   G+ PNV   N +L+ L    R E A +    M    C  +  TF I++   
Sbjct: 316 EILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFF 375

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
             N  V   + +L +M + G   ++  YT +I   C+E  ++EA+ L K M A    P+ 
Sbjct: 376 CQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNT 435

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           ++Y  ++  LC   R  DA D++  MI  G +P    F  ++  LC+ G  ++++  L+ 
Sbjct: 436 ISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLK- 494

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                               +  L  C           D  S++  I  L +  +  +A 
Sbjct: 495 --------------------QMLLNGC---------SPDLISYSTVIDGLGKAGKTDEAL 525

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ELL  MV   + P+   YS+      K       +++F  +   ++  D++ Y+ ++  L
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           C+      A+E    M  +GC  + S++ ILI GL
Sbjct: 586 CKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGL 620



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 114/234 (48%), Gaps = 1/234 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++  F     ++ A+ +L +M + G + +   + +VL  +   +R + D   +  +M++
Sbjct: 405 TVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER-WVDAEDLMSQMIE 463

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PN  T N ++  L +   +E A++  ++M   GC P+  ++  VI GL    + D+
Sbjct: 464 QGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDE 523

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L  M + G+      Y+ I   L +E ++   I++F  ++ + +  D + Y  +I+
Sbjct: 524 ALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVIS 583

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
            LC+    D A + L  M+  G  P +  +  ++RGL   G   E+   L + C
Sbjct: 584 SLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELC 637


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 157/637 (24%), Positives = 291/637 (45%), Gaps = 30/637 (4%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----GLAGNVE 113
           R  +  D ++ +L +  D + AL++F   + Q    HT ++ C  +L+L    G  G++ 
Sbjct: 63  RRVVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTES-CNYMLELMRAHGRVGDMA 121

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVF 169
           ++  L Q  V +   NV     + +F  V    V G +R     L  M   G  L+   +
Sbjct: 122 QVFDLMQKQVVKT--NV--GTFATIFGGVG---VEGGLRSAPVALPVMREAGMSLNAYTY 174

Query: 170 NVVLGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           N ++  +V  K GF A+ + VYK MV+ GI P+V T + L+    +   +++ L     M
Sbjct: 175 NGLIYFLV--KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             +G  PN  ++ I I+ L   +R D++  ILG+M D G + ++  +T II +LC   +L
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRL 292

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A  +F  M+A D  PD +TY  L++   ++       ++   M+  G       +  +
Sbjct: 293 SDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAV 352

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRK 403
           V  LC+VG+ DE++   ++      SP    +N+L+     A  F  A  +   M A   
Sbjct: 353 VDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 412

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  +  + I +  ++ +  KA +    M    +VPD A  +A +           A R
Sbjct: 413 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKR 472

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           VF ++ A  +  D+I+Y+ +++   +  K  EA+  F  M ++GC     + N LI  L 
Sbjct: 473 VFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLY 532

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              K ++A +L           T  TY  ++ GL +  + K+++ +L +M       ++ 
Sbjct: 533 KGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLI 592

Query: 584 AYCILIQSMSEQNKLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQL----HLVSS 638
            Y  ++  +S+  ++ +CA+     M + G  PD  +  ++++GL    +L     +   
Sbjct: 593 TYNTVLDCLSKNGEV-NCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQ 651

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
               L  D   L + + + + NGL KE L +   Y+L
Sbjct: 652 MKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYIL 688



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 145/652 (22%), Positives = 278/652 (42%), Gaps = 87/652 (13%)

Query: 141  FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVK 195
            F+N+Y  +G    A++   +M S G    V   N VL ++    R G A  VF   E+  
Sbjct: 422  FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFY--ELKA 479

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             G+ P+  T   +++   + ++ + A++ F  M + GC P+      +I  L    + ++
Sbjct: 480  MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNE 539

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  +  ++ ++ I+     Y  ++  L RE K++E ++L + M      P+ +TY  +++
Sbjct: 540  AWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599

Query: 316  CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTS 374
            CL +N  ++ A D+L  M   G  P    +  ++ GL +  + +E+   F + K   + +
Sbjct: 600  CLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK--KILA 657

Query: 375  PHNA-------------------------LLECCCNAGKF--------FLAKCILEK--- 398
            P  A                         +L+  CN  K          L K  +EK   
Sbjct: 658  PDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIE 717

Query: 399  ----MADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
                +A R I   D +  P IR LC++++  +A++L  +     V     +Y++ + G  
Sbjct: 718  FAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLV 777

Query: 454  KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                 + A  +F ++       D  +Y+ +++ + +  ++ E ++V   M + G   +  
Sbjct: 778  DENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYV 837

Query: 514  SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            ++N +I GL   +++++AI L     S G S T  TY  ++ GL+K  +  D   +  +M
Sbjct: 838  TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEM 897

Query: 574  LVEGCAL-----------------------------------DVEAYCILIQSMSEQNKL 598
            L  GC                                     D+++Y ILI ++    +L
Sbjct: 898  LEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRL 957

Query: 599  KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
             D   +F  + + GL PD      L+ GL    ++    S  N++     + +   YN L
Sbjct: 958  NDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSL 1017

Query: 659  INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
            I  L K G  ++A+ + + +L KGW P   T+  L+ G SV    D+   A+
Sbjct: 1018 ILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAY 1069



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 131/630 (20%), Positives = 274/630 (43%), Gaps = 20/630 (3%)

Query: 4    KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSP 63
            +L ++ +S   I +  +  C S  S A+   ++  +DM++S    D           L+ 
Sbjct: 476  ELKAMGVSPDTITYTMMIKCCSKASKADEA-MNFFSDMVESGCVPDV----------LAL 524

Query: 64   DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            + LI  L      + A ++F  +  + + + T  TY  ++  LG  G V+E+  L + M 
Sbjct: 525  NSLIDTLYKGGKGNEAWQLFHKLK-EMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMT 583

Query: 124  KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
            +  YP       +++     +  VN A+ +L +M   G    +  +N V+  +++E+R  
Sbjct: 584  RTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEER-L 642

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEI 242
             +   ++ +M K  + P+  TL  +L    +   ++ AL   +  + K GC  +  +F  
Sbjct: 643  EEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHS 701

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +++G++  + V+ S+     +   GI L   F   +I  LC+  K  EA +LF   + L 
Sbjct: 702  LMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 761

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +     +Y  LI  L +   +D A D+  +M  +G  P +  +  I+  + +  + +E +
Sbjct: 762  VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEML 821

Query: 363  NFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI-RWL 417
               ++  + GY ++   +N ++     + +   A  +   +     +       P+   L
Sbjct: 822  KVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGL 881

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
             ++ ++  A  L   M+     P+C  Y+  + G     N E+  ++F ++  Q +  D 
Sbjct: 882  LKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDI 941

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             SY+ L++ LC   ++ + +  F  + + G       +N+LI GL    ++++A+ L + 
Sbjct: 942  KSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNE 1001

Query: 538  AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
                G      TY  ++L L K  +A +   +  ++L +G    V  Y  LI+  S    
Sbjct: 1002 MKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGS 1061

Query: 598  LKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
              +    +  M+  G  P+  T + L + L
Sbjct: 1062 TDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 3/273 (1%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ + ++L+ + VV + V   AT    V  +  L +   AL V R+     + L++ +Y+
Sbjct: 119 DMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAG---MSLNAYTYN 175

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+  L +     EA+EV+  M ++G S S  ++++L+      R VD  + L +   + 
Sbjct: 176 GLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEAR 235

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      +YT  +  L +  R  +   +L +M   GC  DV  + ++IQ + +  +L D 
Sbjct: 236 GVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDA 295

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F  M  +   PDR T ++LL    D      V    N +V+D    +   Y  +++ 
Sbjct: 296 KAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDA 355

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L + G   +A  + D M  KG  P+  ++  L+
Sbjct: 356 LCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLI 388



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/291 (18%), Positives = 121/291 (41%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I +L ++    +A E+   MV   + P   TYS  ++   K  + +  L +  ++
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            A+ +  +  SY+  +  L Q  +  EA  +   M  +GC     +  ++I  LC   ++
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRL 292

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A  +     +S       TY  ++        ++ ++ V   M+ +G   ++ +Y  +
Sbjct: 293 SDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAV 352

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           + ++ +  ++ +    F+ M + G+ P++ +  SL+ G              N + +   
Sbjct: 353 VDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 412

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
             +   + + IN   K G + +A    + M  KG VPD      ++ S  G
Sbjct: 413 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAG 463


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 228/506 (45%), Gaps = 14/506 (2%)

Query: 130 VREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFV 189
           ++E + S V+S    +   G  R ++     G K  V ++++++ A  E KRG  D  F 
Sbjct: 91  LKETINSGVYSIREVFNELGVARGVL-----GIKTYV-LYDLLIRACCELKRG--DDAFE 142

Query: 190 YKEMVKA-GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
             +M+K  G++P+V   N +L +  ++NR E A   +  M +     +  TF I+I  L 
Sbjct: 143 CFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLC 202

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              ++  +   +G M  LGI+  +  Y  II   C   ++E A  +F +M+   + PD  
Sbjct: 203 KEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSY 262

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK----FDESVNF 364
           TY   I+ +C+  +L++A+ +LE M  IGL PT   +  ++ G C  G     FD     
Sbjct: 263 TYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKM 322

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEI 423
           + +      S +N L+       K   A  I+++M+++  + D  ++NI I   C    +
Sbjct: 323 VREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNV 382

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           +KA+ L   M+   + P   TY++ +    K    + A  +F ++  + +  D I ++ L
Sbjct: 383 KKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNAL 442

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G C    +  A  +   M +        +FN L+ G C   KV+ A  L     S G 
Sbjct: 443 IDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGI 502

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                +Y  ++ G  K    KD   V  +ML  G    +  Y  LIQ + +  +      
Sbjct: 503 KPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQ 562

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLAD 629
               M+  G+ P+  T LSL+ G+ +
Sbjct: 563 LLKEMISKGITPNDNTYLSLIEGIGN 588



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 168/361 (46%), Gaps = 6/361 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++  + +  RV GA  +   M   G K     +   +  + +E +   +   + ++M +
Sbjct: 231 TIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK-LEEASGMLEKMKE 289

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P   T N L++       +E A D   +M ++G  P   T+ ++I  L  + ++D+
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  I+ EM + G+  +   Y  +I   CR   +++A  L   M +  + P  +TY  LI 
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L +  R+  A+D+ E ++  G+ P   +F  ++ G C  G  D +   L++       P
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVP 469

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
                N L++  C  GK   A+ ++E+M  R I  D  S+N  I    +  +++ A+ + 
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+     P   TY+A + G CK    + A ++ +++ ++ +  +  +Y  L+EG+  V
Sbjct: 530 DEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589

Query: 491 E 491
           E
Sbjct: 590 E 590



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 198/474 (41%), Gaps = 12/474 (2%)

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           LGI+  +  Y  +I   C   + ++A   F MM+   ++P      ++++   ++ R + 
Sbjct: 116 LGIKTYV-LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEK 174

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A  +  +M  + +  +   F  ++  LC+ GK  ++  F+         P    +N ++ 
Sbjct: 175 AWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH 234

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C+ G+   A+ I + M  R +  D  ++   I  +C+  ++ +A  +L +M    + P
Sbjct: 235 GYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRP 294

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
              TY+  + G C   N E A     ++  + L+    +Y+ L+  L    K+ EA  + 
Sbjct: 295 TAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGII 354

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             MS+ G    S ++NILI G C    V KA  L     S G   T  TYT ++  L K 
Sbjct: 355 KEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKR 414

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            R K    +  +++ +G   D+  +  LI        +         M +  +VPD  T 
Sbjct: 415 GRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTF 474

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +L+ G     ++      I ++ S     D   YN LI+G  K G    A  + D ML 
Sbjct: 475 NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534

Query: 681 KGWVPDATTHGLLV-GSSVGEEIDS-----RRFAFDSSSFPDSVSDILAEGLGN 728
            G+ P   T+  L+ G    EE D      +       +  D+    L EG+GN
Sbjct: 535 IGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGN 588



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 42/302 (13%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
            + TA TY  +I      GN+E        MV+E           L+ +     +++ A 
Sbjct: 292 LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            ++  M+  G       +N+++         K+ F     ++ EM+  GI P   T   L
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFT----LHDEMISKGIQPTRVTYTSL 407

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           + VL +  R++ A D F ++ +KG  P+   F  +I G  AN  +D + ++L EM  + +
Sbjct: 408 IYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV 467

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE--------------------- 307
             +   +  ++   CRE K+E A  L + M++  + PD                      
Sbjct: 468 VPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFR 527

Query: 308 --------------LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
                         LTY  LI  LC+N   D A  +L++MI  G+TP D+ ++ ++ G+ 
Sbjct: 528 VRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587

Query: 354 EV 355
            V
Sbjct: 588 NV 589


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 184/385 (47%), Gaps = 5/385 (1%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P+  T N L+  L    R  +AL     M ++GC P+  T+ I+++     S    ++
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +L EM D G   ++  Y  ++  +C+E ++E+A+   K + +    P+ ++Y  ++  L
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
               R +DA  ++E+M   G  P    F  ++  LC  G  + ++  LE    Y  +P  
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N LL   C   K   A   +E M  R    D  S+N  +  LC N E+  A ELL +
Sbjct: 342 LSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +      P   +Y+  + G  K    ++AL +  +++++ L  D I+YS +  GLC+ ++
Sbjct: 402 LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDR 461

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I EAV  FC +   G   +++ +N ++ GLC  R+   AI L +   SSG     STYT 
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEG 577
           ++ GL      K+   + AQ+   G
Sbjct: 522 LVEGLAYEGLVKEARELFAQLCSRG 546



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 179/388 (46%), Gaps = 33/388 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+       R + A+ VL +M   G    V  + ++L A  + + G+   + +  EM  
Sbjct: 171 TLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCK-RSGYKQAMKLLDEMHD 229

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P++ T N +L  + +  R+E A++  + +   GC PN+ ++ IV+KGL    R +D
Sbjct: 230 KGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWED 289

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++ EM   G    +  +  +I  LCR   +E A+ + + M      P+ L+Y  L++
Sbjct: 290 AEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLH 349

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C+  ++  A + +E M+  G  P      DIV                          
Sbjct: 350 AFCKQKKIHKAMEFVELMVSRGCYP------DIVS------------------------- 378

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N LL   C  G+  +A  +L ++ D+  +    S+N  I  L +  + ++A ELL  M 
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              + PD  TYS    G C+    E+A+R F +V    +   +  Y+ ++ GLC+  +  
Sbjct: 439 SKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH 498

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            A+++F  M  +GC  + S++ IL+ GL
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGL 526



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 192/447 (42%), Gaps = 13/447 (2%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +IK L A+ R  D+  +L          ++  Y  ++   C   +L+ A RL   M    
Sbjct: 110 LIKKLCASGRTADARRVLAASGP-----DVMVYNAMVAGYCGAGQLDAARRLVADM---P 161

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD  TY  LI  LC   R  +A  +LEDM   G  P    +  ++   C+   + +++
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 363 NFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             L++     C      +N +L   C  G+   A   L+ +       +  S+NI ++ L
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
              E    A +L+  M      P+  T++  +   C+    E A+ V  Q+       +S
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           +SY+ L+   C+ +KI +A+E    M   GC     S+N L+  LC   +VD AI L   
Sbjct: 342 LSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G S    +Y  ++ GL K  + K+ L +L +M  +G   D+  Y  +   +  +++
Sbjct: 402 LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDR 461

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           +++    F  +   G+ P      ++L GL    + H        ++S   + + S Y I
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWV 684
           L+ GL  EGL  +A  L   +  +G V
Sbjct: 522 LVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 175/385 (45%), Gaps = 13/385 (3%)

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD----IVRGLCEVGKFDESVNFLED 367
           E +  L     LDDA  +++ +   GL P     V     +++ LC  G+  ++   L  
Sbjct: 72  ERLRVLVRRGELDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASGRTADARRVLAA 129

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
             G     +NA++   C AG+   A+ ++  M      D  ++N  IR LC       A 
Sbjct: 130 S-GPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE--PDAYTYNTLIRGLCGRGRTSNAL 186

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            +L  M     +PD  TY+  +   CK   Y+ A+++  ++  +    D ++Y+ ++ G+
Sbjct: 187 AVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGI 246

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           CQ  ++ +A+E    +   GC  ++ S+NI++ GL    + + A +L       G     
Sbjct: 247 CQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNV 306

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            T+  ++  L +    +  + VL QM   GC  +  +Y  L+ +  +Q K+     F  +
Sbjct: 307 VTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD--SEVLDSSMYNILINGLWKE 665
           MV  G  PD  +  +LL  L    ++ +    +++L     S VL S  YN +I+GL K 
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLIS--YNTVIDGLTKA 424

Query: 666 GLTSQASYLLDLMLGKGWVPDATTH 690
           G T +A  LLD M  KG  PD  T+
Sbjct: 425 GKTKEALELLDEMTSKGLQPDIITY 449



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 5/259 (1%)

Query: 113 EEMEGLCQNMV-KERYPNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           E+ E L + M  K   PNV     +++ SF+     V  AM VL  M   G   +   +N
Sbjct: 288 EDAEKLMEEMAHKGCPPNV--VTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYN 345

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            +L A  ++K+      FV + MV  G  P++ + N LL  L     ++ A++   ++  
Sbjct: 346 PLLHAFCKQKKIHKAMEFV-ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKD 404

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           KGC P   ++  VI GL    +  +++ +L EM   G+Q ++  Y+ I   LCRE+++EE
Sbjct: 405 KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEE 464

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+R F  ++ + + P    Y  ++  LC+     +A D+   MI  G  P +  +  +V 
Sbjct: 465 AVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVE 524

Query: 351 GLCEVGKFDESVNFLEDKC 369
           GL   G   E+       C
Sbjct: 525 GLAYEGLVKEARELFAQLC 543


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 256/596 (42%), Gaps = 66/596 (11%)

Query: 135 ISLVFSFVNHYRVNGAM-RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
           +SL+    +H   + AM   L +  + G   S   F  ++ A     R  AD V  +  M
Sbjct: 107 VSLLLRLSSH--ADEAMFDALADARAAGLPASSSAFAALVAAHSSAGR-HADAVQAFSRM 163

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            +    P     N +L+ L ++  I  AL  + RM   GC PN  T+ +++ GL      
Sbjct: 164 DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA 223

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D++ +  EM D GI   +  YT ++  LC   K++EA++L   M+    +PDE+TY   
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAF 283

Query: 314 INCLC-----------------------------------ENLRLDDANDILEDMIVIGL 338
           ++ LC                                   +  R D+     + M+   +
Sbjct: 284 LSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNI 343

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKC 394
           +P   ++  ++RG  E G+ +++++FL+   K G+V  T  +N +L+  C+ G    A  
Sbjct: 344 SPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M    +  D  +  I I  LC+   + +A ++   M      P   TY+A + G  
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 454 KLCNYEDALRVFRQVS-------------AQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +    E+A  +F ++                + V DS S  KLV  +CQ  ++ +A ++ 
Sbjct: 464 REGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLL 523

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +  +G      ++N LI GLC  R +D A+RL       G S    TY  ++ GL++ 
Sbjct: 524 RSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRA 583

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA-LFFNVMVKAGLVPDRET 619
            R  D +++   +L  G +  +  Y  +++S+    KL     L+ + + K    P    
Sbjct: 584 HRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESE 643

Query: 620 MLSLLHG-LADGSQLHLVSSGINKLVS-DSE--VLDSSMYNILINGLWKEGLTSQA 671
           +L+  H  + DGS    +  G+ +L+  D E   + S+ Y I + GL +   T  A
Sbjct: 644 VLANAHKEIEDGS----LDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDA 695



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/510 (22%), Positives = 205/510 (40%), Gaps = 127/510 (24%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYL 208
           A+ +   M + G   +   +NV++  +   K+G A D + ++ EM+  GI+PNV     L
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLC--KQGMAGDALKMFDEMLDRGIMPNVKIYTVL 248

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           L  L    +I+ A+     M  KGC P+  T+   + GL    RV+++   L  + D G 
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            L L  Y+C+I  L +  + +E    +K M   ++ PD + Y  +I    E  R++DA  
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368

Query: 329 ILEDMIVIGLTPTDDVFVDIVR-----------------------------------GLC 353
            L+ M   G  P    +  +++                                   GLC
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 354 EVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM---------- 399
           + G  DE++       E  C      +NAL++     G+   A+ +  KM          
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFL 488

Query: 400 ----ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                  ++ D +S    +  +C++ ++ KAY+LL  ++ S VVPD  TY+  + G CK 
Sbjct: 489 RLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKA 548

Query: 456 CNYEDALRVFRQVSAQSLVLDSISY----------------------------------- 480
            N + A+R+F+++  + +  D I+Y                                   
Sbjct: 549 RNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608

Query: 481 SKLVEGLCQVEKITEAV-----------------EVFCCMSK--------NGCS------ 509
           + ++  LC+++K+++A+                 EV     K        +G        
Sbjct: 609 NSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKID 668

Query: 510 -----LSSSSFNILIYGLCVMRKVDKAIRL 534
                +SS+ + I + GLC +R+ D A+R+
Sbjct: 669 QEYGYISSNPYTIWLIGLCQVRRTDDALRI 698



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 1/319 (0%)

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  ++ L ++  I  A  L  RMV +   P+ ATY+  + G CK     DAL++F ++ 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + ++ +   Y+ L+  LC   KI EAV++   M   GC     ++N  + GLC + +V+
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A +   +    G +     Y+ ++ GL + +R  +       ML    + DV  Y I+I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           +  +E  +++D   F +VM K G VPD     ++L  L D   L    +  ++++ ++ V
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFA 708
           LDS+   I+I GL K GL  +A  + D M   G  P   T+  L+     E  ++  R  
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 709 FDSSSFPDSVSDILAEGLG 727
           F      ++ S  L   LG
Sbjct: 475 FHKMEMGNNPSLFLRLTLG 493



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 192/481 (39%), Gaps = 27/481 (5%)

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E+  D        G   +S  F  ++    +  R  D+V     M +   +     Y  I
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +  L     +  A+ L+  M A    P+  TY  L++ LC+     DA  + ++M+  G+
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL---EDK-CGYVTSPHNALLECCCNAGKFFLAKC 394
            P   ++  ++  LC  GK DE+V  L   +DK C      +NA L   C  G+   A  
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQ 298

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            L  + D   A     ++  I  L +     + +     M+  ++ PD   Y+  + G  
Sbjct: 299 RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCA 358

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           +    EDAL     +  +  V D+  Y+ +++ LC    +  A  +   M +N   L S+
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +  I+I GLC    VD+A+++       G   T  TY  ++ G  +  R           
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR----------- 467

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
                   +E   +L   M   N   + +LF  + + A  V D E++  L+H +    Q+
Sbjct: 468 --------LEEARMLFHKMEMGN---NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQV 516

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 +  ++    V D   YN LINGL K      A  L   +  KG  PD  T+G L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 694 V 694
           +
Sbjct: 577 I 577



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 161/360 (44%), Gaps = 45/360 (12%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP--- 235
           KRG  D    ++ EM + G  P V T N L++  +   R+E A   F +M + G  P   
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLF 487

Query: 236 -----------NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
                      +S +   ++  +  + +V  +  +L  + D G+  ++  Y  +I  LC+
Sbjct: 488 LRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              L+ A+RLFK ++   + PDE+TY  LI+ L    R +DA  + ++++  G +P+  +
Sbjct: 548 ARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSI 607

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  ++R LC + K  +++N   D   Y+   +N  +E    A             A ++I
Sbjct: 608 YNSMMRSLCRMKKLSQAINLWLD---YLPKKYNFPVESEVLAN------------AHKEI 652

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S +  +R L +   I + Y  +      S  P    Y+ +++G C++   +DALR+
Sbjct: 653 ED-GSLDDGVRELIK---IDQEYGYI------SSNP----YTIWLIGLCQVRRTDDALRI 698

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +    + +     + L+  LC    +  AV++          LS    N L+  LC+
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCI 758



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 5/156 (3%)

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            LA     G      A+  L+ + S   +  D    F+ M +    P      ++L  L 
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALV 183

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
           D   + L  +  N++V+     + + YN+L++GL K+G+   A  + D ML +G +P+  
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243

Query: 689 THGLLVGS-----SVGEEIDSRRFAFDSSSFPDSVS 719
            + +L+ S      + E +       D    PD V+
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 153/664 (23%), Positives = 275/664 (41%), Gaps = 104/664 (15%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           ++S      E +++ L  +L P  +  VL    D   AL+ F W   Q R++H       
Sbjct: 174 LRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPI---- 229

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
                                   R P   EA   ++ S+    ++  AMRVL  M    
Sbjct: 230 ------------------------RRP---EAFGYVMVSYSRAGKLRNAMRVLTMMQ--- 259

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
                                            KAGI P++   N  + VL   NR++ A
Sbjct: 260 ---------------------------------KAGIEPDLSICNTAIHVLVMGNRLDKA 286

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +    RM      PN  T+  +IKG     R++D++ ++ EM   G   +   Y  ++  
Sbjct: 287 VRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGF 346

Query: 282 LCRENKLEEAIRLF--KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
           LC+E +++E +RL   KM++  +L+PD++TY   ++ L ++   D+A + L +       
Sbjct: 347 LCKEKRIKE-VRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA------ 399

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
                               E   F  DK GY     +A++   C  G+   AK I+ +M
Sbjct: 400 --------------------EERRFRVDKVGY-----SAIVHSFCREGRMDKAKEIVNEM 434

Query: 400 ADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             +  I D  ++   I  LC+  ++ +A ++L +M      P+  +Y+A + G CK  N 
Sbjct: 435 FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 494

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +A  +         + ++I+YS L+ G  +  K +EA ++   M K G   +    N+L
Sbjct: 495 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 554

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I  LC   KVD+A R      ++G +     +T ++ G  +    +  L +L  M +   
Sbjct: 555 IQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK 614

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y  +I ++ ++ ++++       M++ GL+P   T  +++H      ++  +  
Sbjct: 615 HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLK 674

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            + K++S  E    + YN +I  L   G   QA  LL  +L      DA T  +L+ S +
Sbjct: 675 LLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYL 732

Query: 699 GEEI 702
            + I
Sbjct: 733 SKGI 736



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/443 (20%), Positives = 184/443 (41%), Gaps = 56/443 (12%)

Query: 60  NLSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           NL PD +     + +L        AL+  +    ++RF+     Y  ++      G +++
Sbjct: 368 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE-ERRFRVDKVGYSAIVHSFCREGRMDK 426

Query: 115 MEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
            + +   M  K   P+V     S++       +V+ A ++L  M   G K +   +  +L
Sbjct: 427 AKEIVNEMFSKGCIPDV-VTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 485

Query: 174 GAIVEEKRGFADFVFVYKEMVKAG----IVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             + +            +EM+        +PN  T + L+       +   A D  R M 
Sbjct: 486 NGLCKNGNSLE-----AREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMI 540

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           KKG  P      ++I+ L    +VD++   + +  + G  + +  +T +I   C+++ LE
Sbjct: 541 KKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLE 600

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
            A+ L   M   +  PD +TY  +I+ L +  R+++A  +   M+ +GL PT   +  ++
Sbjct: 601 AALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVI 660

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS 409
              C +G+ ++ +                                +LEKM  R+  +C +
Sbjct: 661 HQYCRMGRVEDLLK-------------------------------LLEKMLSRQ--ECRT 687

Query: 410 -WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT----YSAFVLGKCKLCNYEDALRV 464
            +N  I  LC    + +AY+LLG+++ ++   D  T      +++     L +Y  A R+
Sbjct: 688 AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRM 747

Query: 465 FRQVSAQSLVL-DSISYSKLVEG 486
           F +     L L + +S   ++EG
Sbjct: 748 FNRNLIPDLKLCEKVSKKLMLEG 770


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 146/650 (22%), Positives = 278/650 (42%), Gaps = 88/650 (13%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREA 133
           +L  ALK+F  +S +      + +Y  +I  L   G +EE  GL   M ++   P+ R  
Sbjct: 245 NLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVF 188
            + L+ +  +   ++ A  +   M + G K +V  + V++  +     +EE  G      
Sbjct: 305 TV-LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANG------ 357

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V ++MVK GI P+V T N L+    +  R+  A +    M K+ C PN RTF  +++GL 
Sbjct: 358 VCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +   +V +L  M D G+  ++  Y  +I  LCRE  +  A +L   M + DL PD L
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCL 477

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
           T+  +IN  C+  + D A+  L  M+  G++  +     ++ G+C VGK  +++  LE  
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETL 537

Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
            K   +T+PH                                S N+ +  L +  ++++ 
Sbjct: 538 VKMRMLTTPH--------------------------------SLNVILDMLSKGCKLKEE 565

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +LG++    +VP   TY+  V G  +  +   + R+   +     + +   Y+ ++ G
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIING 625

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LCQ  ++ EA ++   M  +G S +  ++ +++ G     K+D+A+         G    
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685

Query: 547 TSTYTKIMLGLVKLQRA---------KDLLVVLAQM------------------------ 573
              Y+ ++ G V  Q+          K+L+ V+ Q+                        
Sbjct: 686 DRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDES 745

Query: 574 -------LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                  L  G  L+ +A  I+++S   + K   C     +++K+G VP  ++   ++ G
Sbjct: 746 NGLVQTILKSGVFLE-KAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQG 804

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
           L            + +L++ + V++ S     +  L + G  S+   L+D
Sbjct: 805 LKKEGDTERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLVD 854



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 122/549 (22%), Positives = 239/549 (43%), Gaps = 7/549 (1%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFET 215
           ++SG F+++ DV   ++      ++     +  + E+ + +G   N    + LL  L + 
Sbjct: 114 VSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKL 173

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           +    A   +RRM   G       +  ++  L  N   + +   + ++  +G  L+    
Sbjct: 174 DLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIV 233

Query: 276 TCIIPMLCRENKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           T ++   CR   L +A+++F +M R     P+ ++Y  LI+ LCE  RL++A  + + M 
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G  P+   +  +++ LC+ G  D++ N  ++       P    +  L++  C  GK  
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIE 353

Query: 391 LAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +  KM  D       ++N  I   C++  +  A+ELL  M   +  P+  T++  +
Sbjct: 354 EANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G C++     A+ + +++    L  D +SY+ L++GLC+   +  A ++   M+     
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLE 473

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               +F  +I   C   K D A     L    G S    T T ++ G+  + + +D L +
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFI 533

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           L  ++         +  +++  +S+  KLK+       + K GLVP   T  +L+ GL  
Sbjct: 534 LETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              +      +  +     + +   Y I+INGL + G   +A  LL  M   G  P+  T
Sbjct: 594 SGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653

Query: 690 HGLLVGSSV 698
           + ++V   V
Sbjct: 654 YTVMVKGYV 662


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 256/596 (42%), Gaps = 66/596 (11%)

Query: 135 ISLVFSFVNHYRVNGAM-RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
           +SL+    +H   + AM   L +  + G   S   F  ++ A     R  AD V  +  M
Sbjct: 107 VSLLLRLSSH--ADEAMFDALADARAAGLPASSSAFAALVAAHSSAGR-HADAVQAFSRM 163

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            +    P     N +L+ L ++  I  AL  + RM   GC PN  T+ +++ GL      
Sbjct: 164 DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA 223

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D++ +  EM D GI   +  YT ++  LC   K++EA++L   M+    +PDE+TY   
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAF 283

Query: 314 INCLC-----------------------------------ENLRLDDANDILEDMIVIGL 338
           ++ LC                                   +  R D+     + M+   +
Sbjct: 284 LSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNI 343

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKC 394
           +P   ++  ++RG  E G+ +++++FL+   K G+V  T  +N +L+  C+ G    A  
Sbjct: 344 SPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M    +  D  +  I I  LC+   + +A ++   M      P   TY+A + G  
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 454 KLCNYEDALRVFRQVS-------------AQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +    E+A  +F ++                + V DS S  KLV  +CQ  ++ +A ++ 
Sbjct: 464 REGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLL 523

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +  +G      ++N LI GLC  R +D A+RL       G S    TY  ++ GL++ 
Sbjct: 524 RSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRA 583

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA-LFFNVMVKAGLVPDRET 619
            R  D +++   +L  G +  +  Y  +++S+    KL     L+ + + K    P    
Sbjct: 584 HRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESE 643

Query: 620 MLSLLHG-LADGSQLHLVSSGINKLVS-DSEV--LDSSMYNILINGLWKEGLTSQA 671
           +L+  H  + DGS    +  G+ +L+  D E   + S+ Y I + GL +   T  A
Sbjct: 644 VLANAHKEIEDGS----LDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDA 695



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 205/510 (40%), Gaps = 127/510 (24%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYL 208
           A+ +   M + G   +   +NV++  +   K+G A D + ++ EM+  GI+PNV     L
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLC--KQGMAGDALKMFDEMLDRGIMPNVKIYTVL 248

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           L  L    +I+ A+     M  KGC P+  T+   + GL    RV+++   L  + D G 
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            L L  Y+C+I  L +  + +E    +K M   ++ PD + Y  +I    E  R++DA  
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368

Query: 329 ILEDMIVIGLTPTDDVFVDIVR-----------------------------------GLC 353
            L+ M   G  P    +  +++                                   GLC
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 354 EVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM---------- 399
           + G  DE++       E  C      +NAL++     G+   A+ +  KM          
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFL 488

Query: 400 ----ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                  ++ D +S    +  +C++ ++ KAY+LL  ++ S VVPD  TY+  + G CK 
Sbjct: 489 RLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKA 548

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKL-------------------------------- 483
            N + A+R+F+++  + +  D I+Y  L                                
Sbjct: 549 RNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608

Query: 484 ---VEGLCQVEKITEAV-----------------EVFCCMSK--------NGC------- 508
              +  LC+++K+++A+                 EV     K        +G        
Sbjct: 609 NSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKID 668

Query: 509 ----SLSSSSFNILIYGLCVMRKVDKAIRL 534
               S+SS+ + I + GLC +R+ D A+R+
Sbjct: 669 QEYGSISSNPYTIWLIGLCQVRRTDDALRI 698



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 141/285 (49%)

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  ++ L ++  I  A  L  RMV +   P+ ATY+  + G CK     DAL++F ++ 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + ++ +   Y+ L+  LC   KI EAV++   M   GC     ++N  + GLC + +V+
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A +   +    G +     Y+ ++ GL + +R  +       ML    + DV  Y I+I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           +  +E  +++D   F +VM K G VPD     ++L  L D   L    +  ++++ ++ V
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           LDS+   I+I GL K GL  +A  + D M   G  P   T+  L+
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 192/481 (39%), Gaps = 27/481 (5%)

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E+  D        G   +S  F  ++    +  R  D+V     M +   +     Y  I
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +  L     +  A+ L+  M A    P+  TY  L++ LC+     DA  + ++M+  G+
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL---EDK-CGYVTSPHNALLECCCNAGKFFLAKC 394
            P   ++  ++  LC  GK DE+V  L   +DK C      +NA L   C  G+   A  
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQ 298

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            L  + D   A     ++  I  L +     + +     M+  ++ PD   Y+  + G  
Sbjct: 299 RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCA 358

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           +    EDAL     +  +  V D+  Y+ +++ LC    +  A  +   M +N   L S+
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +  I+I GLC    VD+A+++       G   T  TY  ++ G  +  R           
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR----------- 467

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
                   +E   +L   M   N   + +LF  + + A  V D E++  L+H +    Q+
Sbjct: 468 --------LEEARMLFHKMEMGN---NPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQV 516

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 +  ++    V D   YN LINGL K      A  L   +  KG  PD  T+G L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 694 V 694
           +
Sbjct: 577 I 577



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 161/360 (44%), Gaps = 45/360 (12%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP--- 235
           KRG  D    ++ EM + G  P V T N L++  +   R+E A   F +M + G  P   
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLF 487

Query: 236 -----------NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
                      +S +   ++  +  + +V  +  +L  + D G+  ++  Y  +I  LC+
Sbjct: 488 LRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              L+ A+RLFK ++   + PDE+TY  LI+ L    R +DA  + ++++  G +P+  +
Sbjct: 548 ARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSI 607

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  ++R LC + K  +++N   D   Y+   +N  +E    A             A ++I
Sbjct: 608 YNSMMRSLCRMKKLSQAINLWLD---YLPKKYNFPVESEVLAN------------AHKEI 652

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S +  +R L +   I + Y       +SS       Y+ +++G C++   +DALR+
Sbjct: 653 ED-GSLDDGVRELIK---IDQEYG-----SISS-----NPYTIWLIGLCQVRRTDDALRI 698

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +    + +     + L+  LC    +  AV++          LS    N L+  LC+
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCI 758



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 5/156 (3%)

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            LA     G      A+  L+ + S   +  D    F+ M +    P      ++L  L 
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALV 183

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
           D   + L  +  N++V+     + + YN+L++GL K+G+   A  + D ML +G +P+  
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243

Query: 689 THGLLVGS-----SVGEEIDSRRFAFDSSSFPDSVS 719
            + +L+ S      + E +       D    PD V+
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 148/661 (22%), Positives = 280/661 (42%), Gaps = 69/661 (10%)

Query: 62  SPDHLIRVLDNTNDLS-SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
            P+ L+RVL++      +AL+ F+WV  Q  F  +   +  ++  L   G ++    + +
Sbjct: 50  QPEFLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVME 109

Query: 121 NMVK----------------ERYPNVREALISLVFS-FVNHYRVNGAMRVLVNMNSGGFK 163
             ++                 R   V   L+ L+   F     +   + V   M + G  
Sbjct: 110 KAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLL 169

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
             V   N VL  ++++K    +   VY  M+K  I P + T N +++   +   +  A++
Sbjct: 170 PDVRNCNRVL-KLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVE 228

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
               M   GC PN  ++ +++ GL      D +  ++ +M  LG+++    Y  +I   C
Sbjct: 229 VLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFC 288

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           ++   EEA  L + M     +P  +TY  ++  LC   R+ DA   L+ M+   L P   
Sbjct: 289 KKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLV 348

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
            +  ++ G   +G F E++    +       P    +N L++  C  G   +AK + + M
Sbjct: 349 SYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDM 408

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               +  D  ++ I +R  C+   +  A EL   M+   + PDC  Y+  ++G+ KL N 
Sbjct: 409 IKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNP 468

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
             A  +  ++ A+    D I+Y+ L+ GLC++    +A E+                   
Sbjct: 469 SKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELV------------------ 510

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
                      + +RL  +      +YT+  +  ++ GL  L++A++   V + ML +G 
Sbjct: 511 -----------QKMRLEGIV-PDHVTYTSIIHAHLISGL--LRKAEE---VFSDMLKKGI 553

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
              V  Y +LI S + + +L     +F+ M   G+ P+  T  +L++GL   + + +  +
Sbjct: 554 HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYN 613

Query: 639 GINKLVSDSEVLDSSMYNILIN-----GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
              ++ S     +   Y ILIN       W++ L      L   ML +   PD+ TH  L
Sbjct: 614 LFAEMESKGVSPNKYTYTILINENSNLQYWQDALK-----LYKDMLDREIKPDSCTHSAL 668

Query: 694 V 694
           +
Sbjct: 669 M 669



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 216/502 (43%), Gaps = 5/502 (0%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +V  L+ L++V  +   +E  L  F +M   G  P+ R    V+K L   S V++   + 
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVY 195

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
             M    I+  +  +  ++   C+E ++  A+ +  +MR     P++++Y  L+N L   
Sbjct: 196 SVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGK 255

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
              D A +++E M ++GL  +   +  ++RG C+   F+E+ +   +  G    P    +
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N ++   C  G+   A+  L+ M +  +  D  S+N  I          +A  L   +  
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            ++VP   TY+  + G C+  N + A  +   +    L  D ++++ LV G CQ+  +  
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E+F  M   G      ++   I G   +    KA  ++    + G      TY  ++ 
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL KL    D   ++ +M +EG   D   Y  +I +      L+     F+ M+K G+ P
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP 555

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
              T   L+H  A   +L       +++       +   YN LI GL KE +   A  L 
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615

Query: 676 DLMLGKGWVPDATTHGLLVGSS 697
             M  KG  P+  T+ +L+  +
Sbjct: 616 AEMESKGVSPNKYTYTILINEN 637



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 147/319 (46%), Gaps = 11/319 (3%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           FA+ + ++ E+    +VP+V T N L++    T  ++ A      M K G CP+  TF I
Sbjct: 363 FAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTI 422

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM---MR 299
           +++G      +  +  +  EM   G++ +   YT  I     E KL    + F M   M+
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRI---VGELKLGNPSKAFGMKEEMK 479

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           A    PD +TY  LIN LC+    DDAN++++ M + G+ P    +  I+      G   
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPI 414
           ++     D       P    +  L+      G+   AK   ++M D+ ++ +  ++N  I
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC+   +  AY L   M    V P+  TY+  +     L  ++DAL++++ +  + + 
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIK 659

Query: 475 LDSISYSKLVEGLCQVEKI 493
            DS ++S L++ L +  K+
Sbjct: 660 PDSCTHSALMKHLSKDYKL 678


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 161/682 (23%), Positives = 287/682 (42%), Gaps = 82/682 (12%)

Query: 80  LKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK--ERYPNV------- 130
           LK++    + K   H  D     + K G   ++     L  N+VK  E Y  V       
Sbjct: 3   LKVYAEKGMVKNALHVFDN----MGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMR 58

Query: 131 REALISLVFS---FVNHY----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-----E 178
           R  ++  VF+    VN Y    +V  A+  +  M   GF+L+   +N ++   V     E
Sbjct: 59  RLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIE 118

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNS 237
             +G      V K M + G++ N  TL  L++   +  ++E A    R M K+ G   + 
Sbjct: 119 GAKG------VLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDE 172

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             +  +I G     ++ D++ +  EM  +G+++ L     +I   C+  ++ E  RL   
Sbjct: 173 YAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC 232

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           MR LDL PD  +Y  L++  C +     A ++ + M+  G+ PT   +  +++GLC  G 
Sbjct: 233 MRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGD 292

Query: 358 FDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           + +++             ++ GY T     LL+     G F  A  + + +  R I    
Sbjct: 293 YKDALRLWHLMLQRGVTPNEVGYCT-----LLDGLFKMGDFSRALTLWDDILARGINKSI 347

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N  I  LC+  E+  A E   RM      PD  TY     G CK+ N E+A ++  +
Sbjct: 348 YAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEK 407

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  + +      Y+ L+ GL   +KI++ +++   M   G S +  ++  LI G C   +
Sbjct: 408 MEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGR 467

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM------LVEGCALD 581
           +DKA          G +      +KI+  L +L R  +  ++L +M      L   C  D
Sbjct: 468 LDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLED 527

Query: 582 VE-----------------------------AYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            +                              Y I +  + +  K+ D   FF  +    
Sbjct: 528 FQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGS 587

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             PD  T  +L+HG +    ++   +  +++V+   V + + YN L+NGL K G   +A 
Sbjct: 588 FTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRAR 647

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            L D +  KG +P+  T+ +L+
Sbjct: 648 RLFDKLHLKGLIPNVVTYNILI 669



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 108/479 (22%), Positives = 196/479 (40%), Gaps = 48/479 (10%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M++ GI P V T N LL+ L      + AL  +  M ++G  PN   +  ++ GL    
Sbjct: 267 QMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMG 326

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
               ++++  ++   GI   +  +  +I  LC+  +++ A   FK M  L   PD +TY 
Sbjct: 327 DFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYR 386

Query: 312 ELINCLCENLRLDDAN-----------------------------------DILEDMIVI 336
            L +  C+   +++A                                    D+L +M   
Sbjct: 387 TLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTR 446

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA 392
           GL+P    +  ++ G C+ G+ D++ +   +  G   +P+    + ++      G+   A
Sbjct: 447 GLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA 506

Query: 393 KCILEKMADRKIA---DC--DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             +L+KM D  +     C  D  N  IR L    +  K  + L    +   +P+   Y+ 
Sbjct: 507 NMLLQKMVDFDLVLDHRCLEDFQNADIRKL----DCWKIADTLDESAIKFSLPNNVVYNI 562

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK     DA R F  +S  S   D+ +Y  L+ G      + EA  +   M   G
Sbjct: 563 AMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKG 622

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              + +++N L+ GLC    +D+A RL    +  G      TY  ++ G  K    ++ L
Sbjct: 623 LVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREAL 682

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
            +  +ML EG +  +  Y  LI    +Q+ +++     N M  + +     T   L+ G
Sbjct: 683 DLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEG 741



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 30/367 (8%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+++  N L+  LF + +I   +D    M  +G  PN  T+  +I G     R+D + S 
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM   G    +   + I+  L R  +++EA  L + M   DL+ D    E+  N    
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIR 534

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
            L      D L++  +    P + V+   + GLC+ GK +++  F         +P N  
Sbjct: 535 KLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDN-- 592

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                         C L                 I        + +A+ L   MV   +V
Sbjct: 593 -----------FTYCTL-----------------IHGFSAAGYVNEAFNLRDEMVNKGLV 624

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY+A + G CK    + A R+F ++  + L+ + ++Y+ L++G C+     EA+++
Sbjct: 625 PNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDL 684

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M K G S S  +++ LI G C    V++A++L +   +S    T +T++K++ G ++
Sbjct: 685 RGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQ 744

Query: 560 LQRAKDL 566
               K +
Sbjct: 745 HGDVKKM 751



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 191/451 (42%), Gaps = 9/451 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F+  + ++ +++  GI  ++   N ++  L +   ++ A + F+RM + GC P+  T+  
Sbjct: 328 FSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRT 387

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +  G      V+++  I  +M    I   +  Y  +I  L    K+ + I L   M    
Sbjct: 388 LSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRG 447

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L P+ +TY  LI   C+  RLD A     +MI  G  P   +   IV  L  +G+ DE+ 
Sbjct: 448 LSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEAN 507

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGK-----FFLAKCILEKMADRKIADCDSWNIPIRWL 417
             L+    +     +  LE   NA       + +A  + E      + +   +NI +  L
Sbjct: 508 MLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGL 567

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C++ ++  A      +   S  PD  TY   + G        +A  +  ++  + LV + 
Sbjct: 568 CKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNI 627

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y+ L+ GLC+   +  A  +F  +   G   +  ++NILI G C      +A+ LR  
Sbjct: 628 TTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGK 687

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G S +  TY+ ++ G  K    ++ + +L +M        +  +  L++   +   
Sbjct: 688 MLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGD 747

Query: 598 LKDCALFFNVM----VKAGLVPDRETMLSLL 624
           +K  +   N+M      AG+   ++  LS L
Sbjct: 748 VKKMSKLHNMMHMACPSAGITSHKQMELSEL 778



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 98/462 (21%), Positives = 190/462 (41%), Gaps = 8/462 (1%)

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           +++K       V +++ +   M   G +  L     ++  L +  +   A+ ++  MR L
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           D++PD  T   ++N  C+  +++ A + + +M  +G       +  +V G   +G  + +
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 362 ---VNFLEDKCGYVTSP--HNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPI 414
              + F+ +K G + +      L++  C   K   A+ +L +M   D  + D  ++   I
Sbjct: 121 KGVLKFMSEK-GVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALI 179

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C+  ++  A  +   M+   +  +    ++ + G CK     +  R+   +    L 
Sbjct: 180 DGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLK 239

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            DS SY  LV+G C+    ++A  V   M + G   +  ++N L+ GLC       A+RL
Sbjct: 240 PDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRL 299

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             L    G +     Y  ++ GL K+      L +   +L  G    + A+  +I  + +
Sbjct: 300 WHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCK 359

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             ++      F  M + G  PD  T  +L  G      +        K+  +       M
Sbjct: 360 MGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEM 419

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           YN LI GL+     S+   LL  M  +G  P+  T+G L+  
Sbjct: 420 YNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAG 461



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 3/170 (1%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDT 204
           +VN A R  + ++ G F  + D F            G+ +  F +  EMV  G+VPN+ T
Sbjct: 572 KVNDARRFFLGLSHGSF--TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITT 629

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N LL  L ++  ++ A   F ++H KG  PN  T+ I+I G   +    +++ + G+M 
Sbjct: 630 YNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKML 689

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
             GI   +  Y+ +I   C+++ +EEA++L   M+A ++     T+ +L+
Sbjct: 690 KEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 36/248 (14%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ V+ Q+    +V D  + + +V   C+  K+  AVE    M K G  L++ S+N L+ 
Sbjct: 50  AVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVD 109

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE-GCA 579
           G   +  ++ A  +       G      T T ++ G  K  + ++   VL +M  E G  
Sbjct: 110 GYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVV 169

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           +D  AY  LI    +  K+ D     + M+K GL                          
Sbjct: 170 VDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGL-------------------------K 204

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           +N  V +S          LING  K G   +   LL  M      PD+ ++  LV     
Sbjct: 205 MNLFVCNS----------LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCR 254

Query: 700 EEIDSRRF 707
           + + S+ F
Sbjct: 255 DGLSSKAF 262


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 233/528 (44%), Gaps = 8/528 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIVIKGLI 248
           +  M K   +P+V     LL  + +     +A+   + MH   G  P++    +VI  L 
Sbjct: 63  FHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLC 122

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               V    S+LG M  LG++  +  +T +I  LC +  +  A+ L   +       D  
Sbjct: 123 HLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVK 182

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LIN LC+  +  +A   L  M      P   V+  ++ GLC+ G   E++    + 
Sbjct: 183 TYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEM 242

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
            G    P    +  L++  CN G++  A  +L++M    +  D  S NI +  LC+  +I
Sbjct: 243 SGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKI 302

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A  ++G M++   VPD  TY++ +   C     ++A RVF  + ++  + D ++Y+ L
Sbjct: 303 MQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSL 362

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + G C+++ I +A+ +   M K G +    ++  LI G C + +   A  L    +  G 
Sbjct: 363 IHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQ 422

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T   I+ GL K Q   + L +   M      L++  Y I++  M    KL     
Sbjct: 423 VPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALE 482

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F+ +   GL  +      +++G A    L      ++ +  +  + DS  YN+ + GL 
Sbjct: 483 LFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLV 542

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS--RRFAF 709
            E   +++   L +M  KG+  DATT  +++      + D+  R F F
Sbjct: 543 AEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFLF 590



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 197/450 (43%), Gaps = 8/450 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
              VL  M   G + SV  F +++ G  V+   G A  V +   + K G   +V T   L
Sbjct: 130 GFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRA--VELVDHVEKTGYRSDVKTYGVL 187

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           +  L +  +   A+   R+M ++   PN   +  V+ GL  +  V +++ +  EM   GI
Sbjct: 188 INGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGI 247

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           +  L  YTC+I  LC   + +EA  L   M  + +MPD  +   L++ LC+  ++  A  
Sbjct: 248 KPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKS 307

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           ++  MI++G  P    +  ++   C   + DE+    E        P    + +L+   C
Sbjct: 308 VIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWC 367

Query: 385 NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                  A  +L++M       D  +W   I   C+      A EL   M     VP+  
Sbjct: 368 KIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQ 427

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           T +  + G CK     +AL +F  +   +L L+ + YS +++G+C   K+  A+E+F C+
Sbjct: 428 TCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCL 487

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
              G  ++  ++ I+I G      +DKA  L S    +G    + TY   + GLV  +  
Sbjct: 488 PAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREI 547

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
              +  L  M  +G ++D     ++I  +S
Sbjct: 548 ARSIKYLTMMRDKGFSVDATTTEMIINYLS 577



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 163/381 (42%), Gaps = 11/381 (2%)

Query: 345 FVDIVRGLCEVGKF---DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
           F++ +R  C+ GK    DE++NF          P       LL        +  A  +++
Sbjct: 40  FLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVK 99

Query: 398 KMADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +M        D++  N+ I  LC  + +   + +LG M+   + P   T++  + G C  
Sbjct: 100 EMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVK 159

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            +   A+ +   V       D  +Y  L+ GLC++ K +EAV     M +   + +   +
Sbjct: 160 GDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVY 219

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + ++ GLC    V +A+ L       G      TYT ++ GL    R K+   +L +M+ 
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   D+++  IL+  + ++ K+         M+  G VPD  T  SL+      +Q+  
Sbjct: 280 MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE 339

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
            +     +VS   + D   Y  LI+G  K    ++A +LLD M+  G+ PD  T   L+G
Sbjct: 340 ATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIG 399

Query: 696 S--SVGEEIDSRRFAFDSSSF 714
               VG  + ++    +   +
Sbjct: 400 GFCQVGRPLAAKELFLNMHKY 420



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 3/221 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I +  L   ++E   + + MV     P++  A  SL+  +     +N AM +L  
Sbjct: 323 TYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIV-AYTSLIHGWCKIKNINKAMHLLDE 381

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   GF   V  +  ++G   +  R  A    ++  M K G VPN+ T   +L+ L ++ 
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAA-KELFLNMHKYGQVPNLQTCAIILDGLCKSQ 440

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            +  AL  F  M K     N   + I++ G+ +  +++ ++ +   +   G+Q+ +  YT
Sbjct: 441 LLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYT 500

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +I    ++  L++A  L   M     MPD  TY   +  L
Sbjct: 501 IMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 229/501 (45%), Gaps = 19/501 (3%)

Query: 28  SCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS 87
           S   T PL+  + +  +H      A   ++ H    +  +R L    DL  AL++ +  S
Sbjct: 29  SLPTTKPLTPNSRLNFAH--AGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVE--S 84

Query: 88  IQKRFQHTADTYCK-MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYR 146
           +       A   C  +I KL  +G   E     + ++    P+V  A  ++V  +    +
Sbjct: 85  MSGLEPSAAPGPCAALIKKLCASGRTAE----ARRVLAACEPDVM-AYNAMVAGYCVTGQ 139

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++ A R++ +M     +     +N ++  +    R   + + V  +M++ G VP+V T  
Sbjct: 140 LDAARRLVADMP---MEPDSYTYNTLIRGLCGRGR-TGNALVVLDDMLRRGCVPDVVTYT 195

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LLE   + +  + A+     M  KGC P+  T+ +V+ G+    RVDD++  L  +   
Sbjct: 196 ILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSH 255

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G +     Y  ++  LC   + E+A +L   M      P+ +T+  LI+ LC    ++ A
Sbjct: 256 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPA 315

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
            ++L+ +   G TP    +  I+   C+  K D ++ F+E        P    +N LL  
Sbjct: 316 MEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375

Query: 383 CCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+   A  +L ++ D+       S+N  I  L +  + ++A ELL  MV   + PD
Sbjct: 376 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TYS    G C+    E+A+R F +V    +  +++ Y+ ++ GLC+  +   A+++F 
Sbjct: 436 IITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFI 495

Query: 502 CMSKNGCSLSSSSFNILIYGL 522
            M  NGC  + S++ ILI GL
Sbjct: 496 YMISNGCMPNESTYTILIEGL 516



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 213/509 (41%), Gaps = 25/509 (4%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VP+    N  L  L     +E AL     M              +IK L A+ R  ++  
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARR 115

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +L        + ++  Y  ++   C   +L+ A RL   M    + PD  TY  LI  LC
Sbjct: 116 VLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLC 167

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
              R  +A  +L+DM+  G  P    +  ++   C+   + +++  L++      +P   
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM 433
            +N ++   C  G+   A   L+ +       +  S+NI ++ LC  E    A +L+  M
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                 P+  T++  +   C+    E A+ V  Q+       +S+SY+ ++   C+ +K+
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A+     M   GC     S+N L+  LC   +VD A+ L       G +    +Y  +
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + GL K  + K+ L +L +M+ +G   D+  Y  +   +  ++++++    F  +   G+
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGI 467

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+     ++L GL    + H        ++S+  + + S Y ILI GL  EGL  +A  
Sbjct: 468 RPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARE 527

Query: 674 LLDLMLGKGWVP------------DATTH 690
           LL  +  +G V             D TTH
Sbjct: 528 LLGELCSRGVVSKGLINKAAIRLLDGTTH 556



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 5/259 (1%)

Query: 113 EEMEGLCQNMVKERYP-NVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           E+ E L   M ++ YP NV     +++ SF+     V  AM VL  +   G   +   +N
Sbjct: 278 EDAEKLMAEMSQKGYPPNV--VTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            +L A  ++K+      FV + MV  G  P++ + N LL  L     +++A++   ++  
Sbjct: 336 PILHAFCKQKKMDRAMAFV-ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           KGC P   ++  VI GL    +  +++ +L EM   G+Q ++  Y+ I   LCRE+++EE
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           AIR F  ++ + + P+ + Y  ++  LC+     +A D+   MI  G  P +  +  ++ 
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIE 514

Query: 351 GLCEVGKFDESVNFLEDKC 369
           GL   G   E+   L + C
Sbjct: 515 GLTYEGLVKEARELLGELC 533



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 133/329 (40%), Gaps = 48/329 (14%)

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
           G     + VP  A  +  + G  +  + E+ALR+   +S           + L++ LC  
Sbjct: 48  GVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCAS 107

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +  EA  V        C     ++N ++ G CV  ++D A RL +       SYT   Y
Sbjct: 108 GRTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYT---Y 159

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ GL    R  + LVVL  ML  GC  DV  Y IL+++  +++  K      + M  
Sbjct: 160 NTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA 219

Query: 611 AGLVPDRETMLSLLHGL-----------------ADGSQLHLVSSGI-------NKLVSD 646
            G  PD  T   +++G+                 + G + + VS  I        +   D
Sbjct: 220 KGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWED 279

Query: 647 SEVLDSSM-----------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           +E L + M           +N+LI+ L + GL   A  +LD +   G  P++ ++  ++ 
Sbjct: 280 AEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH 339

Query: 696 SSVGEEIDSRRFAF-----DSSSFPDSVS 719
           +   ++   R  AF         +PD VS
Sbjct: 340 AFCKQKKMDRAMAFVELMVSRGCYPDIVS 368


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 218/469 (46%), Gaps = 6/469 (1%)

Query: 165 SVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           S+  FN +LG++V+     +   + + + +   GI P++ T N L+        +  A  
Sbjct: 65  SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              ++ K G  P++ TF  +IKGL  N +V +++     +  LG  L+   Y  +I  LC
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +  +   A+++ + +    +  + + Y  +I+ LC++  + DA ++   MI   ++P   
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
            F  ++ G C VG+ +E+     +      +P     N L++  C  G    AK +L  M
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               +  +  +++  +   C   ++ KA  +L  +      P+  +Y   + G CK+   
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ++AL +F  +  + +  D ++Y+ L++GLC+  +I+ A E+   M  NG   +  ++N L
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL 424

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I  LC    VD+AI L       G      T+  ++ GL K+ R K+   V   +L +G 
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           +++   Y I++  + ++    +     + M   G++PD  T  +L+  L
Sbjct: 485 SVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 205/455 (45%), Gaps = 52/455 (11%)

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
           N    AI L + +    + PD  T+  LINC C    ++ A  ++  ++ +G  P    F
Sbjct: 82  NHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141

Query: 346 VDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
             +++GLC  GK  E+++F +         D+  Y T     L+   C  G+   A  +L
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGT-----LINGLCKIGETRTALQML 196

Query: 397 EKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            K+ D K+   +   +N  I  LC+++ +  AYEL  +M+   + PD  T+SA + G C 
Sbjct: 197 RKI-DGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCI 255

Query: 455 LCNYEDALRVFRQVSAQSLVLDS-----------------------------------IS 479
           +   E+A  +FR++  +++  D                                    ++
Sbjct: 256 VGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVT 315

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L++G C V ++ +A  V   +S+ G + ++ S+  +I G C ++ VD+A+ L +   
Sbjct: 316 YSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQ 375

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G +    TY  ++ GL K  R      ++ +M   G   ++  Y  LI ++ + + + 
Sbjct: 376 FKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVD 435

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                   +   G+ PD  T   L++GL    +L         L+S    +++  YNI++
Sbjct: 436 QAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMV 495

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           NGL KEGL  +A  LL  M   G +PDA T+  L+
Sbjct: 496 NGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 205/461 (44%), Gaps = 20/461 (4%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVP 200
            +N A  ++  +   G++     FN ++  +     V+E   F D V          +  
Sbjct: 118 EMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL--------ALGF 169

Query: 201 NVDTLNY--LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           ++D  +Y  L+  L +     +AL   R++  K    N   +  +I  L  +  V D+  
Sbjct: 170 HLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYE 229

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +  +M    I  ++  ++ +I   C   +LEEA  LF+ M   ++ PD  T+  L++ LC
Sbjct: 230 LYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALC 289

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPH 376
           +   L  A ++L  M+  G+ P    +  ++ G C V + +++ + L    + G   + H
Sbjct: 290 KEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAH 349

Query: 377 N--ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRM 433
           +   ++   C       A  +   M  + IA D  ++N  I  LC++  I  A+EL+  M
Sbjct: 350 SYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEM 409

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
             +    +  TY+  +   CK  + + A+ + +++  Q +  D  +++ L+ GLC+V ++
Sbjct: 410 HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRL 469

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A +VF  +   G S+++ ++NI++ GLC     D+A  L S    +G      TY  +
Sbjct: 470 KNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETL 529

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           +  L      +    +L +M+       +E   +++   SE
Sbjct: 530 IQALFHKDENEKAEKLLREMIARDVVYALEGLEMVLHLESE 570



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 140/309 (45%), Gaps = 9/309 (2%)

Query: 50  YEAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMIL 104
           YE   Q +   +SPD      LI        L  A  +F+ + + K       T+  ++ 
Sbjct: 228 YELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM-VLKNINPDYYTFNILVD 286

Query: 105 KLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
            L   GN++  + +   M+KE   PNV     SL+  +    +VN A  VL  ++  G  
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVV-TYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            +   +  ++    + K    + + ++ +M   GI P+  T N L++ L ++ RI  A +
Sbjct: 346 PNAHSYCTMINGFCKIKM-VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWE 404

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
               MH  G   N  T+  +I  L  N  VD +++++ ++ D GIQ ++  +  +I  LC
Sbjct: 405 LVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLC 464

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +  +L+ A  +F+ + +     +  TY  ++N LC+    D+A  +L  M   G+ P   
Sbjct: 465 KVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAV 524

Query: 344 VFVDIVRGL 352
            +  +++ L
Sbjct: 525 TYETLIQAL 533


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/516 (21%), Positives = 238/516 (46%), Gaps = 6/516 (1%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V ++  MV+   +P+V   + L + +       + +  FR M   G   +     IV 
Sbjct: 45  DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-MMRALDL 303
                  R+D + S+L      GI   +  +  ++  L  ENK+ +A+ LFK ++R    
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+E+ Y  ++N L +    +    +L  M      P    +  ++  LC+    D ++N
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAIN 224

Query: 364 FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
            L +       P    +N+L++  C  G++   K +L +M +  I  +  +++I I  LC
Sbjct: 225 LLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLC 284

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +  ++  A E++  M+   V PD  TYSA + G C     + A RVF  +  + +  +  
Sbjct: 285 KEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIF 344

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           SYS L+ G C+ + + +A+++F  +S+ G    + +++ +++GL  + ++  A ++    
Sbjct: 345 SYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEM 404

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G +     ++ ++ G  K    ++ +++ +++       ++  Y ++I  + + +++
Sbjct: 405 LRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRV 464

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           ++    F  +   GL+PD  T   ++ G         V   + K+  +    ++  YN++
Sbjct: 465 REAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVI 524

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + G ++    S+    +  M G+G+  DATT G+L+
Sbjct: 525 MQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 224/490 (45%), Gaps = 15/490 (3%)

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           MR+L      G  +S  + N+V  +     R   D  F V    +K GI  NV T N LL
Sbjct: 88  MRIL------GIPISDSILNIVTNSYCLRHR--IDCAFSVLPIYLKTGIPFNVVTFNTLL 139

Query: 210 EVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
             LF  N++  A+  F+++  +K C PN   +  V+ GL      + ++S+L  M     
Sbjct: 140 GGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNT 199

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           + ++  Y+ +I  LC++  L+ AI L   M+  ++ P+  TY  LI+ LC+  + +    
Sbjct: 200 KPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           +L +M+ + + P    F  ++ GLC+ GK +++   +         P    ++A+++  C
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G+   A+ +   + D+ I  +  S++I I   C+ + + KA +L G +    + PD  
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TYS  + G  ++    DA ++F ++       D   +S L+ G  +   + EA+ +F  +
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            +N    + S + ++I GLC   +V +A  +     S G      TY  ++ G  +    
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            ++  +L +M   GC  +   Y +++Q     NK+ +   F   M   G   D  T   L
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559

Query: 624 LHGLADGSQL 633
           ++ L +   +
Sbjct: 560 INVLKENPSI 569



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/452 (20%), Positives = 197/452 (43%), Gaps = 43/452 (9%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVRE 132
           N ++ A+ +FK +  +K  +     Y  ++  L   G+ E+   L + M +    P+VR 
Sbjct: 146 NKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRT 205

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
             I ++ +      ++ A+ +L  M       ++  +N ++  + +  + +     +  E
Sbjct: 206 YSI-VIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ-WEKVKTLLSE 263

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV   I PNV T + L++ L +  ++E A +  R M +KG  P+  T+  ++ G     +
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQ 323

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VD +  +   + D GI+  +  Y+ +I   C++  L +A++LF  +    L PD +TY  
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDK 368
           +++ L E  R+ DA  I ++M+ +G TP   +   ++ G  + G  +E++        ++
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
                S +  ++   C   +   A  I EK+     I D  ++N+               
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV--------------- 488

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
                                + G C+   +++   + R++       ++I+Y+ +++G 
Sbjct: 489 --------------------MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            +  KI+E V     M+  G S  +++  +LI
Sbjct: 529 FRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 37/289 (12%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           +DA+ +F ++     +   I +SKL + +  ++  +  V +F  M   G  +S S  NI+
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE-- 576
               C+  ++D A  +  +   +G  +   T+  ++ GL    +  D +V+  +++ E  
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 577 --------GCAL--------------------------DVEAYCILIQSMSEQNKLKDCA 602
                   G  +                          DV  Y I+I ++ +   L    
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
              N M +  + P+  T  SL+ GL    Q   V + ++++V+ +   +   ++ILI+GL
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFD 710
            KEG    A  ++  M+ KG  PD  T+  ++ G  +  ++D  R  F+
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFN 332


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 148/615 (24%), Positives = 267/615 (43%), Gaps = 79/615 (12%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           F  S   F+++L A  +  +   D ++V+ EM KAG    + + N LL  L +   I +A
Sbjct: 90  FSFSAASFDLLLRAHADAGQ-LKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTA 148

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY------ 275
           +  F++M   G  P+  T  I+ K    + RV  +   L EM ++G+ + L  Y      
Sbjct: 149 VAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDG 208

Query: 276 -----------------------------TCIIPMLCRENKLEEAIRLFKMMRALD-LMP 305
                                        T ++   C+E ++EEA ++ K ++  + ++ 
Sbjct: 209 YCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVI 268

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           DE+ Y  LIN  C+  R++DAN + ++MI  G+     V+  ++ G C++G+  E    L
Sbjct: 269 DEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLL 328

Query: 366 E---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIR 415
           +         D+  Y     N L++  C  G    A    + M          ++N  + 
Sbjct: 329 QANEYRGVNLDEYSY-----NTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLN 383

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C    I  A +L   M+   VVP+  + S  + G  K    E AL ++++  A+ L  
Sbjct: 384 GFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLAR 443

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           + ++ + ++ GLC+  ++TEA E+F  M +  C   S ++  LI G C +  + +A ++R
Sbjct: 444 NVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIR 503

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               + G   +   +   + GL   +++  +  +  +M  +G + +   Y  LI    ++
Sbjct: 504 IEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKE 563

Query: 596 NKLKDCALFFNVMVKAGLVPD------------RETMLS----LLHGLAD--------GS 631
             L D  + +  MV+ GL P+            RE  +     +L  LAD         S
Sbjct: 564 GNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAS 623

Query: 632 QLHL--VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
            L++  V+  I  L   +      M+NI+I GL K G  + A  L + +  KG++PD  T
Sbjct: 624 TLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFT 683

Query: 690 HGLLV-GSSVGEEID 703
           +  L+ G S    ID
Sbjct: 684 YSSLIHGCSASGSID 698



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 228/555 (41%), Gaps = 41/555 (7%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE-ALISLVFSFVNHYRVNGAMRVLV 155
           + YCK+       G + E+E L Q   + R  N+ E +  +LV  +     +  A     
Sbjct: 313 NGYCKL-------GRMGEVEKLLQ-ANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCD 364

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M   GF  +   +N +L      +    D + ++  M+K G+VPN  + + LL+  F+ 
Sbjct: 365 MMVRNGFTGTTLTYNTLLNGFCS-RGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKA 423

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            + E AL+ ++    +G   N  T   VI GL  N R+ ++  +   M +     +   Y
Sbjct: 424 GKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTY 483

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C+   L  A ++   M  L  +P    +   I  L    +    NDI  +M  
Sbjct: 484 RTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSA 543

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFL 391
            GL+P    +  ++ G C+ G   ++     +       P+    + L+ C    GK   
Sbjct: 544 KGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDE 603

Query: 392 AKCILEKMADRK-IADCDS--------------------------WNIPIRWLCENEEIR 424
           A  +L+K+AD   I DC +                          WNI I  LC+   + 
Sbjct: 604 ANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVA 663

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  L   + V   +PD  TYS+ + G     + + A  +  ++ +  L  + ++Y+ L+
Sbjct: 664 DARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLI 723

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+   ++ AV +F  +   G S ++ ++N LI G C      +A +L+      G  
Sbjct: 724 YGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQ 783

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
            T  TYT ++ GL      ++ + +L QM+      +   Y  LIQ  +    +K     
Sbjct: 784 PTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKL 843

Query: 605 FNVMVKAGLVPDRET 619
           +N M   GL+P   T
Sbjct: 844 YNEMHICGLLPANWT 858



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 160/703 (22%), Positives = 291/703 (41%), Gaps = 75/703 (10%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           S D L+R   +   L  AL +F  +  +   + T  +  +++ +L  AG++     + Q 
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMG-KAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQ 154

Query: 122 M-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           M      P+     I +  ++    RV  A   L  M   G  +++  ++ V+       
Sbjct: 155 MRCAGTLPDDFTVAI-MAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIG 213

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRT 239
           +       ++   VK G+ PNV T   L++   +  R+E A    + + + +    +   
Sbjct: 214 QTEVARKLLHSLQVK-GLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  +I G     R++D+  +  EM D G+Q+ +  Y  +I   C+  ++ E  +L +   
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANE 332

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              +  DE +Y  L++  C    +  A +  + M+  G T T   +  ++ G C  G  D
Sbjct: 333 YRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAID 392

Query: 360 ESVN--FLEDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPI 414
           +++   FL  K G V +    + LL+    AGK   A  + ++   R +A +  + N  I
Sbjct: 393 DALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVI 452

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV---------- 464
             LC+N  + +A EL  RM   S   D  TY   + G CKL +   A ++          
Sbjct: 453 NGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFV 512

Query: 465 -----FR--------------------QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
                F                     ++SA+ L  ++++Y  L+ G C+   + +A  +
Sbjct: 513 PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACIL 572

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMR--KVDKA-IRLRSLAYS---------------- 540
           +  M + G  L  + F   +   C  R  KVD+A + L+ LA +                
Sbjct: 573 YFEMVEKG--LKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKV 630

Query: 541 -------SGTSYTTST--YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
                  +G ++ ++   +  ++LGL KL R  D   +   + V+G   D   Y  LI  
Sbjct: 631 AHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHG 690

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
            S    +       + M+ A L P+  T  SL++GL     +    S  NKL S     +
Sbjct: 691 CSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPN 750

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  YN LI+G  K+G T++A  L   M+ +G  P   T+ +L+
Sbjct: 751 AITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILI 793



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 132/586 (22%), Positives = 235/586 (40%), Gaps = 72/586 (12%)

Query: 115 MEGLCQNMVKERYPNVREALISL---VFSFVNHYRVNGAMRV--------LVNMNS-GGF 162
           + G CQ    E    VR+ +I     V  FV +  +NG  ++        L+  N   G 
Sbjct: 277 INGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGV 336

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
            L    +N ++      ++GF    F     MV+ G      T N LL        I+ A
Sbjct: 337 NLDEYSYNTLVDGYC--RKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           L  +  M K+G  PN  +   ++ G     + + ++++  E    G+   +     +I  
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC+  ++ EA  LF  M+      D LTY  LI+  C+   L  A  I  +M  +G  P+
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 342 DDVFVDIVRGLC---EVGKFDE-SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL- 396
            ++F   + GL    + GK ++  V          T  + AL+   C  G    A CIL 
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDA-CILY 573

Query: 397 ----EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
               EK     +  C   ++ +       ++ +A  +L ++  + ++ DC   SA  L  
Sbjct: 574 FEMVEKGLKPNLFIC---SVLVSCFYREGKVDEANLVLQKLADTDMIQDC---SASTLNI 627

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK------- 505
            K+ +  ++L      SA+      I ++ ++ GLC++ ++ +A  +F  +         
Sbjct: 628 GKVAHIIESLAGGNHQSAK------IMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDN 681

Query: 506 -------NGCSLSSS---------------------SFNILIYGLCVMRKVDKAIRLRSL 537
                  +GCS S S                     ++N LIYGLC    V +A+ L + 
Sbjct: 682 FTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNK 741

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S G S    TY  ++ G  K     +   +  +M+ EG    V  Y ILI  +  Q  
Sbjct: 742 LQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGY 801

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           +++     + M++  + P+  T  +L+ G A    +  ++   N++
Sbjct: 802 MEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 256/596 (42%), Gaps = 66/596 (11%)

Query: 135 ISLVFSFVNHYRVNGAM-RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
           +SL+    +H   + AM   L +  + G   S   F  ++ A     R  AD V  +  M
Sbjct: 107 VSLLLRLSSH--ADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRN-ADAVQAFSRM 163

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            +    P     N +L+ L ++  I  AL  + RM   GC PN  T+ +++ GL      
Sbjct: 164 DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA 223

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            D++ +  EM D GI   +  YT ++  LC   K++EA++L   M+    +PDE+TY   
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAF 283

Query: 314 INCLC-----------------------------------ENLRLDDANDILEDMIVIGL 338
           ++ LC                                   +  R D+     + M+   +
Sbjct: 284 LSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNI 343

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKC 394
           +P   ++  ++RG  E G+ +++++FL+   K G+V  T  +N +L+  C+ G    A  
Sbjct: 344 SPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M    +  D  +  I I  LC+   + +A ++   M      P   TY+A + G  
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 454 KLCNYEDALRVFRQVS-------------AQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +    E+A  +F ++                + V DS S  KLV  +CQ  ++ +A ++ 
Sbjct: 464 REGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLL 523

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +  +G      ++N LI GLC  R +D A+RL       G S    TY  ++ GL++ 
Sbjct: 524 RSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRA 583

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA-LFFNVMVKAGLVPDRET 619
            R  D +++   +L  G +  +  Y  +++S+    KL     L+ + + K    P    
Sbjct: 584 HRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESE 643

Query: 620 MLSLLHG-LADGSQLHLVSSGINKLVS-DSE--VLDSSMYNILINGLWKEGLTSQA 671
           +L+  H  + DGS    +  G+ +L+  D E   + S+ Y I + GL +   T  A
Sbjct: 644 VLANAHKEIEDGS----LDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDA 695



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/510 (22%), Positives = 205/510 (40%), Gaps = 127/510 (24%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYL 208
           A+ +   M + G   +   +NV++  +   K+G A D + ++ EM+  GI+PNV     L
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLC--KQGMAGDALKMFDEMLDRGIMPNVKIYTVL 248

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           L  L    +I+ A+     M  KGC P+  T+   + GL    RV+++   L  + D G 
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            L L  Y+C+I  L +  + +E    +K M   ++ PD + Y  +I    E  R++DA  
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368

Query: 329 ILEDMIVIGLTPTDDVFVDIVR-----------------------------------GLC 353
            L+ M   G  P    +  +++                                   GLC
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 354 EVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM---------- 399
           + G  DE++       E  C      +NAL++     G+   A+ +  KM          
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFL 488

Query: 400 ----ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                  ++ D +S    +  +C++ ++ KAY+LL  ++ S VVPD  TY+  + G CK 
Sbjct: 489 RLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKA 548

Query: 456 CNYEDALRVFRQVSAQSLVLDSISY----------------------------------- 480
            N + A+R+F+++  + +  D I+Y                                   
Sbjct: 549 RNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIY 608

Query: 481 SKLVEGLCQVEKITEAV-----------------EVFCCMSK--------NGCS------ 509
           + ++  LC+++K+++A+                 EV     K        +G        
Sbjct: 609 NSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKID 668

Query: 510 -----LSSSSFNILIYGLCVMRKVDKAIRL 534
                +SS+ + I + GLC +R+ D A+R+
Sbjct: 669 QEYGYISSNPYTIWLIGLCQVRRTDDALRI 698



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 1/319 (0%)

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  ++ L ++  I  A  L  RMV +   P+ ATY+  + G CK     DAL++F ++ 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + ++ +   Y+ L+  LC   KI EAV++   M   GC     ++N  + GLC + +V+
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A +   +    G +     Y+ ++ GL + +R  +       ML    + DV  Y I+I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           +  +E  +++D   F +VM K G VPD     ++L  L D   L    +  ++++ ++ V
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFA 708
           LDS+   I+I GL K GL  +A  + D M   G  P   T+  L+     E  ++  R  
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 709 FDSSSFPDSVSDILAEGLG 727
           F      ++ S  L   LG
Sbjct: 475 FHKMEMGNNPSLFLRLTLG 493



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 192/481 (39%), Gaps = 27/481 (5%)

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E+  D        G   +S  F  ++    +  R  D+V     M +   +     Y  I
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTI 178

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +  L     +  A+ L+  M A    P+  TY  L++ LC+     DA  + ++M+  G+
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL---EDK-CGYVTSPHNALLECCCNAGKFFLAKC 394
            P   ++  ++  LC  GK DE+V  L   +DK C      +NA L   C  G+   A  
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQ 298

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            L  + D   A     ++  I  L +     + +     M+  ++ PD   Y+  + G  
Sbjct: 299 RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCA 358

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           +    EDAL     +  +  V D+  Y+ +++ LC    +  A  +   M +N   L S+
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +  I+I GLC    VD+A+++       G   T  TY  ++ G  +  R           
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR----------- 467

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
                   +E   +L   M   N   + +LF  + + A  V D E++  L+H +    Q+
Sbjct: 468 --------LEEARMLFHKMEMGN---NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQV 516

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                 +  ++    V D   YN LINGL K      A  L   +  KG  PD  T+G L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 694 V 694
           +
Sbjct: 577 I 577



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 161/360 (44%), Gaps = 45/360 (12%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP--- 235
           KRG  D    ++ EM + G  P V T N L++  +   R+E A   F +M + G  P   
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLF 487

Query: 236 -----------NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
                      +S +   ++  +  + +V  +  +L  + D G+  ++  Y  +I  LC+
Sbjct: 488 LRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              L+ A+RLFK ++   + PDE+TY  LI+ L    R +DA  + ++++  G +P+  +
Sbjct: 548 ARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSI 607

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  ++R LC + K  +++N   D   Y+   +N            F  +  +   A ++I
Sbjct: 608 YNSMMRSLCRMKKLSQAINLWLD---YLPKKYN------------FPVESEVLANAHKEI 652

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S +  +R L +   I + Y  +      S  P    Y+ +++G C++   +DALR+
Sbjct: 653 ED-GSLDDGVRELIK---IDQEYGYI------SSNP----YTIWLIGLCQVRRTDDALRI 698

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +    + +     + L+  LC    +  AV++          LS    N L+  LC+
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCI 758



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 5/156 (3%)

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            LA     G      A+  L+ + S   +  D    F+ M +    P      ++L  L 
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALV 183

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
           D   + L  +  N++V+     + + YN+L++GL K+G+   A  + D ML +G +P+  
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243

Query: 689 THGLLVGS-----SVGEEIDSRRFAFDSSSFPDSVS 719
            + +L+ S      + E +       D    PD V+
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 227/492 (46%), Gaps = 25/492 (5%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           MNS G   +    N++L  +   KR F  FV V+  +++ G  PN  T   L++ L    
Sbjct: 133 MNSIGLLKNFISLNILLNCLCSVKRVFEGFV-VFGMILRKGYRPNTRTFTNLVKGLCLEG 191

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF----DLGIQLEL 272
           +I  A+  F+ M    C P++ T  ++I GL       +++ +   M     D GI  + 
Sbjct: 192 KIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKP 251

Query: 273 SF--YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           +   Y+CII  LC++  +E A   F  M+   + P+ +TY  L++ LC     ++A  + 
Sbjct: 252 TVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLF 311

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNA 386
            +M+  GL P    F  ++  LC+VGK  E+    +        P    +N L+E  C A
Sbjct: 312 IEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLA 371

Query: 387 GKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G     K I   M +++   D  S++I ++  C++ E+  A  L   M+   + P   TY
Sbjct: 372 GMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITY 431

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS---KLVEGLCQVEKITEAVEVFCC 502
           S             DA ++F ++  Q +VLDSISYS     ++GLC+   ++EA++VF  
Sbjct: 432 SKV----------GDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYG 481

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           +     + + + FN LI G+C   K++ A  L +   +        TYT ++ GL K+ +
Sbjct: 482 LENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQ 541

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
            +    +  +M  +GCA +V  +  L++ +   ++        + M    L PD  T+L 
Sbjct: 542 PQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLI 601

Query: 623 LLHGLADGSQLH 634
           ++  L      H
Sbjct: 602 VMDILLKDENYH 613



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 212/532 (39%), Gaps = 79/532 (14%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN + GA+ ++K+ +   + +   M   G++ N  +LN LL  L    R+      F  +
Sbjct: 110 FNNLFGALAKKKQ-YLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMI 168

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            +KG  PN+RTF  ++KG                                   LC E K+
Sbjct: 169 LRKGYRPNTRTFTNLVKG-----------------------------------LCLEGKI 193

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA+R+FK+M   D  P  +T   LI+ LC      +A  + E MI              
Sbjct: 194 GEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMI-------------- 239

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                  G  D  +N     C      ++ +++  C  G    AK    +M ++ I  + 
Sbjct: 240 ------NGNSDFGIN-----CKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNV 288

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   +  LC   E  +A  L   MV   ++PD  T+S  +   CK+   ++A  +F  
Sbjct: 289 VTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDL 348

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  + +   + +Y+ L+EG C    + E  ++F  M    C   + S++IL+   C   +
Sbjct: 349 MVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSE 408

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKI-----MLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           V  A+ L       G   T  TY+K+     + G ++ Q           M+++  +  +
Sbjct: 409 VHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQ----------DMVLDSISYSI 458

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y + +  + +   + +    F  +       +     SL++G+    +L +     N+
Sbjct: 459 --YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNR 516

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L +++   D   Y I+I GL K G   +A  L   M  KG  P+  T   L+
Sbjct: 517 LCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLM 568



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 8/279 (2%)

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A     +M+     P  + ++       K   Y   + +  ++++  L+ + IS + 
Sbjct: 88  LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+  LC V+++ E   VF  + + G   ++ +F  L+ GLC+  K+ +A+R+  +     
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFD 207

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG-------CALDVEAYCILIQSMSEQ 595
              +  T   ++ GL +     + L  L + ++ G       C   V +Y  +I S+ + 
Sbjct: 208 CRPSAITCGVLISGLCRTGNTCNAL-KLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKD 266

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             ++    FF  M + G+ P+  T  SLLHGL   S+         ++V    + D   +
Sbjct: 267 GLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTF 326

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++LI  L K G   +AS L DLM+ +   P   T+ +L+
Sbjct: 327 SVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILI 365



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 142/323 (43%), Gaps = 17/323 (5%)

Query: 51  EAK---IQSLRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKM 102
           EAK   I+ + H L PD      LI  L     +  A  +F  + +Q+  + +  TY  +
Sbjct: 306 EAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLM-VQRYVEPSTRTYNIL 364

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
           I    LAG V+E + +  +MV +R  +   +   L+ ++     V+GAM +   M   G 
Sbjct: 365 IEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGI 424

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           + +V  ++ V  A    ++ F +  F  ++MV   I  +    N  L+ L +   +  AL
Sbjct: 425 QPTVITYSKVGDA----RKLFGEIQF--QDMVLDSI--SYSIYNVYLDGLCKNGCVSEAL 476

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           D F  +       N   F  +I G+  + +++ +  +   + +  +Q ++  YT +I  L
Sbjct: 477 DVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGL 536

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C+  + ++A  LF  M      P+ +T+  L+  LC N       ++L  M    L+P  
Sbjct: 537 CKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDA 596

Query: 343 DVFVDIVRGLCEVGKFDESVNFL 365
              + ++  L +   + E +N L
Sbjct: 597 STLLIVMDILLKDENYHECLNLL 619


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/521 (22%), Positives = 246/521 (47%), Gaps = 7/521 (1%)

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           RVL  M   G + +   +N ++         + + V V+KEM  +G++P V   N  +  
Sbjct: 213 RVLEQMVDAGIRPNNKTYNSLIYGYSTAGM-WKESVRVFKEMSSSGLIPCVVNCNSFIHA 271

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L   NRI+ A D F  M  KG  PN  ++  ++ G  A     +  S++  M   GI   
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
             F+  +I    R   +++A+ +F+ M+   ++PD +T+  +I+ LC   RLDDA     
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 391

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-----HNALLECCCNA 386
            M+ IG+ P++ V+  +++G C  G+  ++   + +       P      ++++      
Sbjct: 392 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKE 451

Query: 387 GKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           G+    K I++ M    +  +  ++N  +   C    + +A+ LL  M    + P+C  Y
Sbjct: 452 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
              V G CK    +DAL VFR +  + +   S+ Y+ ++ GL Q  + T A ++F  M +
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           +G ++S  ++ +++ GLC     D+A  L    ++    +   T+  ++  ++K+ R ++
Sbjct: 572 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQE 631

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
              + A +   G    V  Y ++I ++ ++   ++    F  + K+G  PD   +  ++ 
Sbjct: 632 AKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVR 691

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            L   +++   S+ ++ +  ++  L++S  ++L +   +EG
Sbjct: 692 MLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREG 732



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 120/520 (23%), Positives = 223/520 (42%), Gaps = 8/520 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  +++ G+ P+V + N L++   +   ++ A + F +M ++   P+  T+  +I GL 
Sbjct: 144 VFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLC 203

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +  S  +L +M D GI+     Y  +I         +E++R+FK M +  L+P  +
Sbjct: 204 KTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVV 263

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF---DESVNFL 365
                I+ LC + R+ +A DI + M++ G  P    +  ++ G    G F   +  VN +
Sbjct: 264 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323

Query: 366 EDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEE 422
             K G V +    N L+      G    A  I E M ++  I D  ++   I  LC    
Sbjct: 324 VSK-GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 382

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY-S 481
           +  A      MV   V P  A Y   + G C       A  +  ++  + +    + Y S
Sbjct: 383 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 442

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  L +  ++ E  ++   M + G   +  +FN L+ G C++  +++A  L     S 
Sbjct: 443 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 502

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  ++ G  K  R  D L V   ML +G       Y I++  + +  +    
Sbjct: 503 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ M+++G     +T   +L GL   +     +  + KL + +   D   +NI+I+ 
Sbjct: 563 KKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 622

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           + K G   +A  L   +   G VP   T+ L++ + + EE
Sbjct: 623 MLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEE 662



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 124/584 (21%), Positives = 237/584 (40%), Gaps = 77/584 (13%)

Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           +R   A+ V   +   G    V  +N ++    +E      +   YK M++  + P+V T
Sbjct: 136 HRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYK-MIEQSVSPDVVT 194

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N L++ L +T  +  +     +M   G  PN++T+  +I G        +SV +  EM 
Sbjct: 195 YNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMS 254

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLF----------------------------- 295
             G+   +      I  LCR N+++EA  +F                             
Sbjct: 255 SSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFA 314

Query: 296 ------KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
                  +M +  ++P+   +  LIN       +D A  I EDM   G+ P    F  ++
Sbjct: 315 NMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 374

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC----CCNAGKFFLAKCILEKMADRKIA 405
             LC +G+ D++++           P  A+  C    CCN G+   AK ++ +M ++ I 
Sbjct: 375 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIP 434

Query: 406 D--CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                 ++  I  L +   + +  +++  MV +   P+  T+++ + G C + N E+A  
Sbjct: 435 PPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 494

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +   +++  +  +   Y  LV+G C+  +I +A+ VF  M   G   +S  +NI+++GL 
Sbjct: 495 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLF 554

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             R+   A ++      SGT+ +  TY  ++ GL +     +  ++L ++       D+ 
Sbjct: 555 QARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 614

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            + I+I +M +  + ++    F  +   GLVP   T                        
Sbjct: 615 TFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHT------------------------ 650

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                      YN++I+ L KE    +A  L   +   G  PD+
Sbjct: 651 -----------YNLMISNLIKEESYEEADNLFISVEKSGRAPDS 683



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/493 (19%), Positives = 210/493 (42%), Gaps = 24/493 (4%)

Query: 221 ALDQFRRMHKKGC------CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           A++ F+RM +  C       P   T+ I+I       R + ++++ G +   G+  ++  
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I    +E ++++A  LF  M    + PD +TY  LI+ LC+   +  +  +LE M+
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G+ P +  +  ++ G    G + ESV   ++         + L+ C  N   F  A C
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSS------SGLIPCVVNCNSFIHALC 273

Query: 395 ILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY----------ELLGRMVVSSVVPDCA 443
              ++ + K I D      P   +     +   Y           L+  MV   +VP+  
Sbjct: 274 RHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHR 333

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            ++  +    +    + A+ +F  +  + ++ D+++++ ++  LC++ ++ +A+  F  M
Sbjct: 334 FFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 393

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY-TKIMLGLVKLQR 562
              G   S + +  LI G C   ++ KA  L S   +         Y + I+  L K  R
Sbjct: 394 VDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGR 453

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             +   ++  M+  G   +V  +  L++       +++     + M   G+ P+     +
Sbjct: 454 VAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 513

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+ G     ++    +    ++       S +YNI+++GL++   T+ A  +   M+  G
Sbjct: 514 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESG 573

Query: 683 WVPDATTHGLLVG 695
                 T+G+++G
Sbjct: 574 TTVSIQTYGVVLG 586



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 12/280 (4%)

Query: 426 AYELLGRM------VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           A EL  RM        ++  P   TY+  +    ++   E AL VF ++    L  D  S
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G  +  ++ +A E+F  M +   S    ++N LI GLC  +++ K+ R+     
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG---CALDVEAYCILIQSMSEQN 596
            +G      TY  ++ G       K+ + V  +M   G   C ++  ++   I ++   N
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSF---IHALCRHN 276

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           ++K+    F+ MV  G  P+  +  +LLHG A       ++S +N +VS   V +   +N
Sbjct: 277 RIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFN 336

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           ILIN   + G+  +A  + + M  KG +PD  T   ++ S
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 376



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 3/134 (2%)

Query: 163 KLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           K  +  FN+V+ A+++  +R  A  +F    +   G+VP V T N ++  L +    E A
Sbjct: 610 KFDIITFNIVISAMLKVGRRQEAKELFA--AISTYGLVPTVHTYNLMISNLIKEESYEEA 667

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            + F  + K G  P+SR    +++ L+  + V  + + L  + +  + LE S  + +  +
Sbjct: 668 DNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASL 727

Query: 282 LCRENKLEEAIRLF 295
             RE K  E I+L 
Sbjct: 728 FSREGKCREHIKLL 741


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 203/440 (46%), Gaps = 6/440 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   G+ P+  T+N +LE+  E+  I+ A + F  M  +G CP+S +F++++ G   + 
Sbjct: 195 DMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDG 254

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++ ++   L  M   G   + +  T I+  LC    +  AI  F+ M  L   P+ + + 
Sbjct: 255 KIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFT 314

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCG 370
            LI+ LC+   +  A ++LE+M+  G  P       ++ GLC+ G  +++   FL+    
Sbjct: 315 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 374

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            +  P    + +++   C   K   A+ +  +M ++ +  + +++   I   C+     +
Sbjct: 375 DIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDR 434

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AYEL+  M      P+  TY+A +   CK     +A  +  +  +  L  D ++Y+ L++
Sbjct: 435 AYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 494

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+   I +A+  FC M+K G        NILI   C  +K+ ++ RL  L  S G   
Sbjct: 495 EQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVP 554

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TYT ++ G  K       L     M   GC  D   Y  LI  + +++ + +    +
Sbjct: 555 TKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 614

Query: 606 NVMVKAGLVPDRETMLSLLH 625
             M+  GL P   T ++L +
Sbjct: 615 EAMIDRGLSPPEVTRVTLAY 634



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 210/461 (45%), Gaps = 19/461 (4%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G +P+  T   +L  L E   +  A+  FR+M   G  PN   F  +I GL     
Sbjct: 266 MIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 325

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYE 311
           +  +  +L EM   G +  +  +T +I  LC+    E+A RLF K++R+    P+  TY 
Sbjct: 326 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYT 385

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD---ESVNFLEDK 368
            +I   C+  +L+ A  +   M   GL P  + +  ++ G C+ G FD   E +N ++D+
Sbjct: 386 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDE 445

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            G+  +   +NA+++  C   +   A  +L K     + AD  ++ I I+  C+  +I++
Sbjct: 446 -GFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQ 504

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A     RM  +    D    +  +   C+    +++ R+F+ V +  LV    +Y+ ++ 
Sbjct: 505 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMIS 564

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G C+      A++ F  M ++GC   S ++  LI GLC    VD+A +L       G S 
Sbjct: 565 GYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 624

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              T   +     K   +   ++VL  +  +   L +     L++ +  + K+   ALFF
Sbjct: 625 PEVTRVTLAYEYCKRNDSASAMIVLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFF 681

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
             +++     DR T+ +     ++        SG N LV+D
Sbjct: 682 QKLLEKDSSADRVTLAAFTTACSE--------SGKNNLVAD 714



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 180/424 (42%), Gaps = 6/424 (1%)

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C++       +L EA+ +   M+   L P  +T   ++    E+  +D A ++ ++M V 
Sbjct: 175 CMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVR 234

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLA 392
           G+ P    F  +V G    GK  E+  +L         P NA    +L   C  G    A
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                KM D     +  ++   I  LC+   I++A+E+L  MV +   P+  T++A + G
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSI-SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
            CK    E A R+F ++    +   ++ +Y+ ++ G C+ +K+  A  +F  M + G   
Sbjct: 355 LCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 414

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           + +++  LI G C     D+A  L +L    G      TY  ++  L K  RA +   +L
Sbjct: 415 NVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELL 474

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +    G   D   Y ILIQ   +Q+ +K    FF  M K G   D      L+      
Sbjct: 475 NKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 534

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++         +VS   V     Y  +I+G  KEG    A      M   G VPD+ T+
Sbjct: 535 KKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTY 594

Query: 691 GLLV 694
           G L+
Sbjct: 595 GSLI 598



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 6/365 (1%)

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAK 393
           L    +V   ++R   E+G+ +E+V  + D      SP     N +LE    +G    A+
Sbjct: 166 LQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAE 225

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + ++M+ R +  D  S+ + +     + +I++A   L  M+    +PD AT +  +   
Sbjct: 226 NVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSAL 285

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+      A+  FR++       + I+++ L++GLC+   I +A E+   M +NG   + 
Sbjct: 286 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 345

Query: 513 SSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            +   LI GLC     +KA RL   L  S        TYT ++ G  K  +     ++ +
Sbjct: 346 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 405

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M  +G   +V  Y  LI    +           N+M   G  P+  T  +++  L   S
Sbjct: 406 RMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKS 465

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +       +NK  S     D   Y ILI    K+    QA      M   G+  D   + 
Sbjct: 466 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNN 525

Query: 692 LLVGS 696
           +L+ +
Sbjct: 526 ILIAA 530



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 142/321 (44%), Gaps = 10/321 (3%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGA 150
           F+     +  +I  L   G++++   + + MV+  + PNV     +L+           A
Sbjct: 306 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH-TALIDGLCKRGWTEKA 364

Query: 151 MRVLVNM-NSGGFKLSVDVFNVVLGAIV-EEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            R+ + +  S  +K +V  +  ++G    E+K   A+ +F    M + G+ PNV+T   L
Sbjct: 365 FRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLF--SRMKEQGLFPNVNTYTTL 422

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           +    +    + A +    M  +G  PN  T+  VI  L   SR  ++  +L + F  G+
Sbjct: 423 INGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGL 482

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           + +   YT +I   C+++ +++A+  F  M       D      LI   C   ++ ++  
Sbjct: 483 EADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 542

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           + + ++ +GL PT + +  ++ G C+ G FD ++ +  +   +   P    + +L+   C
Sbjct: 543 LFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLC 602

Query: 385 NAGKFFLAKCILEKMADRKIA 405
                  A  + E M DR ++
Sbjct: 603 KKSMVDEACKLYEAMIDRGLS 623



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 3/277 (1%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISL 137
           A ++F  +     ++    TY  MI        +   E L   M ++  +PNV     +L
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV-NTYTTL 422

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           +         + A  ++  M+  GF+ ++  +N V+ ++ ++ R    +  + K     G
Sbjct: 423 INGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAF-SCG 481

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           +  +  T   L++   + + I+ AL  F RM+K G   + R   I+I       ++ +S 
Sbjct: 482 LEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 541

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +   +  LG+      YT +I   C+E   + A++ F  M+    +PD  TY  LI+ L
Sbjct: 542 RLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGL 601

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           C+   +D+A  + E MI  GL+P +   V +    C+
Sbjct: 602 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 638


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 188/400 (47%), Gaps = 9/400 (2%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P   TF  +I GL    RV ++ +++ +M   G+ +++  Y  I+  +C+    + A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           + L   M    + PD + Y  +I+ LC++    DA  +  +M+  G+ P    +  ++ G
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-AD 406
            C  G++ ++   L D      +P     NAL+      GK F A+ + ++M  R I  D
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I   C++     A  +   M      PD  T++  +   C+    ++ +++ R
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++S + LV ++ +Y+ L+ G C+V+ +  A ++F  M  +G    + + NIL+YG C   
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K+++A+ L  +   S     T  Y  I+ G+ K  +  +   +   + + G   DV+ Y 
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           ++I     ++ + D  + F+ M   G  PD  T  +L+ G
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 400



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 193/422 (45%), Gaps = 2/422 (0%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G    V  FN ++  +  E R       V K MV  G+  +V T   ++  + +    +S
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNK-MVGKGLHIDVVTYGTIVNGMCKMGDTKS 63

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL+   +M +    P+   +  +I  L  +    D+  +  EM + GI   +  Y C+I 
Sbjct: 64  ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 123

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C   +  +A RL + M   ++ PD LT+  LI+   +  +L +A  + ++M+   + P
Sbjct: 124 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 183

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
               +  ++ G C+  +FD++ +  +          N +++  C A +      +L +++
Sbjct: 184 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 243

Query: 401 DRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            R  +A+  ++N  I   CE + +  A +L   M+   V PD  T +  + G C+    E
Sbjct: 244 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 303

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +AL +F  +    + LD+++Y+ ++ G+C+  K+ EA ++FC +  +G      ++N++I
Sbjct: 304 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 363

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C    +  A  L      +G     STY  ++ G +K       + ++++M   G +
Sbjct: 364 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 423

Query: 580 LD 581
            D
Sbjct: 424 GD 425



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 7/259 (2%)

Query: 110 GNVEEMEGLCQNMVKE-RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G + E E LC  M+    +P+      S+++ F  H R + A  +   M S      V  
Sbjct: 164 GKLFEAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVT 218

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN ++      KR   + + + +E+ + G+V N  T N L+    E + + +A D F+ M
Sbjct: 219 FNTIIDVYCRAKR-VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 277

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G CP++ T  I++ G   N ++++++ +   +    I L+   Y  II  +C+ +K+
Sbjct: 278 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 337

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +EA  LF  +    + PD  TY  +I+  C    + DAN +   M   G  P +  +  +
Sbjct: 338 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 397

Query: 349 VRGLCEVGKFDESVNFLED 367
           +RG  + G+ D+S+  + +
Sbjct: 398 IRGCLKAGEIDKSIELISE 416



 Score = 45.4 bits (106), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 39/215 (18%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDT 204
           RV+  M++L  ++  G   +   +N ++    E +    A  +F  +EM+  G+ P+  T
Sbjct: 231 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF--QEMISHGVCPDTIT 288

Query: 205 LNYLLEVLFETNRIESALDQFR--RMHK------------KGCC---------------- 234
            N LL    E  ++E AL+ F   +M K             G C                
Sbjct: 289 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 348

Query: 235 -----PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
                P+ +T+ ++I G    S + D+  +  +M D G + + S Y  +I    +  +++
Sbjct: 349 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 408

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           ++I L   MR+     D  T + + + + +  RLD
Sbjct: 409 KSIELISEMRSNGFSGDAFTIKMVADLITDG-RLD 442



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 2/125 (1%)

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI  +  + ++ + A   N MV  GL  D  T  ++++G+          + ++K+    
Sbjct: 16  LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 75

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSR 705
              D  +Y+ +I+ L K+G  S A YL   ML KG  P+  T+  ++    S G   D++
Sbjct: 76  IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 135

Query: 706 RFAFD 710
           R   D
Sbjct: 136 RLLRD 140


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 212/481 (44%), Gaps = 45/481 (9%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V VY  M K G+ PNV T N L+  L + NR+ +A      M +KGC P+  T+  ++  
Sbjct: 144 VLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSV 203

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+D++  +L  M  +      + Y  I+  LCRE +++E   +   M    L P+
Sbjct: 204 LCKLDRLDEATEVLAAMPPVA-----ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPN 258

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF-- 364
            +TY  +++  C+   L  A  IL  M++ G TP    F  +VRGL + G+  ++++   
Sbjct: 259 VITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWR 318

Query: 365 --LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
             + +     T  +N L+   C+ G    A  IL  M       +  +++  I    +  
Sbjct: 319 WMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAG 378

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++  A  +   M  S   P+   Y+  V   CK   +  A  +  ++  ++   ++++++
Sbjct: 379 DLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFN 438

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+  LC   ++  A+ VF  M ++GC  +  ++N LI+GL        A+ + +   S 
Sbjct: 439 TLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSH 498

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG------------------------ 577
           G   +  TY  ++ GL + + +++ +V + +M+V+G                        
Sbjct: 499 GIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA 558

Query: 578 -----------CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                      C  ++  Y IL+  +  Q+KL D   +   M+  G+ P+  T   L+ G
Sbjct: 559 AWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 618

Query: 627 L 627
           +
Sbjct: 619 V 619



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 197/420 (46%), Gaps = 16/420 (3%)

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C EN +   + ++  MR   + P+  TY  L+  LC+N R+  A  +L++M   G  P D
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
             +  IV  LC++ + DE+   L      V + +NA++   C   +      ++  M  R
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLA-AMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGR 253

Query: 403 KI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            +  +  ++   +   C+  E+R A  +L RMV++   P+  T++A V G        DA
Sbjct: 254 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           L ++R + A+     ++SY+ L+ GLC V  +  A  +   M ++GC  +  +++ LI G
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGC 578
                 +  AI + +    SG       YT ++    K     +AK L   + +ML+E C
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL---IDKMLLENC 430

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD----GSQLH 634
             +   +  LI+S+ +  ++      F+ M + G VP+  T   L+HGL      G  LH
Sbjct: 431 PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALH 490

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +V+    ++ S    L    YN +++GL +  ++ +A   +  M+ +G  P+A T   ++
Sbjct: 491 MVT----EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 546



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 213/488 (43%), Gaps = 18/488 (3%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N + + +  +  M K G  PN  T+ ++++ L  N+RV  +  +L EM   G   +   Y
Sbjct: 138 NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTY 197

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             I+ +LC+ ++L+EA  +   M      P   +Y  ++  LC   R+ +   ++ DM+ 
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVG 252

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFL 391
            GL P    +  IV   C+ G+   +   L        +P+     AL+    + G+   
Sbjct: 253 RGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD 312

Query: 392 AKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +   M     A    S+NI IR LC   +++ A  +L  M      P+  TYS  + 
Sbjct: 313 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 372

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  K  +   A+ ++  +S      + + Y+ +V+  C+     +A  +   M    C  
Sbjct: 373 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 432

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           ++ +FN LI  LC  R+V +A+ +       G      TY +++ GL +     D L ++
Sbjct: 433 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G  L +  Y  ++  + +    ++  +F   M+  G+ P+  T  +++H     
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 552

Query: 631 SQLHLVS---SGINKLVSDSEVLDSSMYNILINGLW-KEGLTSQASYLLDLMLGKGWVPD 686
            ++ + +     +N +     +L   +Y IL+  L  ++ L    +YLL  ML +G  P+
Sbjct: 553 GEVRMAAWMLGAMNVVNCHRNIL---VYTILMAELCNQDKLVDAMTYLLK-MLYEGIYPN 608

Query: 687 ATTHGLLV 694
             T  +LV
Sbjct: 609 TVTWNVLV 616



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/400 (21%), Positives = 177/400 (44%), Gaps = 6/400 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P V  +  ++V +    +R+     V+ +M   G + +V  +  ++ A  +         
Sbjct: 221 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGE-LRMAC 279

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +   MV  G  PNV T   L+  LF+  R+  ALD +R M  +G  P++ ++ I+I+GL
Sbjct: 280 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 339

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
            +   +  + SIL  M   G    +  Y+ +I    +   L  AI ++  M      P+ 
Sbjct: 340 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 399

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  +++  C+ L  + A  +++ M++    P    F  ++R LC+  +   ++    +
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 459

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
              +   P    +N L+      G    A  ++ +M    I     ++N  +  LC+   
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 519

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
            R+A   +G+M+V  + P+  T+SA +   CK      A  +   ++  +   + + Y+ 
Sbjct: 520 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 579

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           L+  LC  +K+ +A+     M   G   ++ ++N+L+ G+
Sbjct: 580 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 18/276 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKR--------FQHTADTYCKMILKLGLAGNVEEMEG 117
           LI       DL  A+ I  W  + +         + +  D +CK ++         + + 
Sbjct: 370 LIDGFSKAGDLGGAISI--WNDMSRSGCKPNVVVYTNMVDVFCKKLM-------FNQAKS 420

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           L   M+ E  P       +L+ S  +  RV  A+ V   M   G   +   +N ++  + 
Sbjct: 421 LIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLF 480

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            E     D + +  EM   GI  ++ T N ++  L +T     A+    +M  +G  PN+
Sbjct: 481 REGN-CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNA 539

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +I        V  +  +LG M  +     +  YT ++  LC ++KL +A+     
Sbjct: 540 FTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLK 599

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           M    + P+ +T+  L+  +  NL   + +D ++ +
Sbjct: 600 MLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 635


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 213/453 (47%), Gaps = 33/453 (7%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  F+ +L AI + K+ +   ++++++M   GI  N+ T N LL      +++  AL  
Sbjct: 80  SIADFSRLLSAISKMKK-YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M K G  P+  TF  ++ G     RV D++ +  +M  +G +  +  Y  II  LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +++ A+ L   M    + PD +TY  LI+ LC + R  DA  ++  M    + P  DV
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP--DV 256

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           F                               NAL++ C   G+   A+   E+M  R +
Sbjct: 257 FT-----------------------------FNALIDACVKEGRVSEAEEFYEEMIRRSL 287

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++++ I  LC    + +A E+ G MV     PD  TYS  + G CK    E  ++
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++S + +V ++++Y+ L++G C+  K+  A E+F  M   G   +  ++N+L++GLC
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              K++KA+ + +    +G      TY  I+ G+ K     D   +   +  +G   D+ 
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
            Y  ++  + ++   ++    F  M + G++P+
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 205/443 (46%), Gaps = 20/443 (4%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y+EM++ GI                  +++ +LD F  M +    P+   F  ++  +  
Sbjct: 49  YREMLRNGI---------------RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK 93

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             + D  + +  +M  LGI   L     ++   CR ++L  A+     M  L   P  +T
Sbjct: 94  MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT 153

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---- 365
           +  L+N  C   R+ DA  + + M+ +G  P   ++  I+ GLC+  + D +++ L    
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
           +D  G     +N+L+   C++G++  A  ++  M  R+I  D  ++N  I    +   + 
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A E    M+  S+ PD  TYS  + G C     ++A  +F  + ++    D ++YS L+
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G C+ +K+   +++FC MS+ G   ++ ++ ILI G C   K++ A  +       G  
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL    + +  LV+LA M   G   D+  Y I+I+ M +  ++ D    
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453

Query: 605 FNVMVKAGLVPDRETMLSLLHGL 627
           +  +   GL+PD  T  +++ GL
Sbjct: 454 YCSLNCQGLMPDIWTYTTMMLGL 476



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 197/455 (43%), Gaps = 30/455 (6%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N   +  +++  I   ++DDS+ +   M        ++ ++ ++  + +  K +  I L+
Sbjct: 45  NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           + M+ L +  +  T   L+NC C   +L  A   L  MI +G  P+   F  ++ G C  
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
            +  +++   +   G    P+  +                              +N  I 
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVI------------------------------YNTIID 194

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC+++++  A +LL RM    + PD  TY++ + G C    + DA R+   ++ + +  
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D  +++ L++   +  +++EA E +  M +        ++++LIYGLC+  ++D+A  + 
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               S G      TY+ ++ G  K ++ +  + +  +M   G   +   Y ILIQ     
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            KL      F  MV  G+ P+  T   LLHGL D  ++      +  +  +    D   Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           NI+I G+ K G  + A  +   +  +G +PD  T+
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 160/344 (46%), Gaps = 6/344 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F    RV  A+ +   M   G+K +V ++N ++  + + K+   + + +   M K
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ-VDNALDLLNRMEK 214

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            GI P+V T N L+  L  + R   A      M K+   P+  TF  +I   +   RV +
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +     EM    +  ++  Y+ +I  LC  ++L+EA  +F  M +    PD +TY  LIN
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CGYVT 373
             C++ +++    +  +M   G+      +  +++G C  GK + +         CG   
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394

Query: 374 S--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
           +   +N LL   C+ GK   A  IL  M    + AD  ++NI IR +C+  E+  A+++ 
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             +    ++PD  TY+  +LG  K     +A  +FR++    ++
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 164/425 (38%), Gaps = 75/425 (17%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y E++      ++LDD+ D+   M+     P+   F  ++  + ++ K+D  V +L ++ 
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD-VVIYLWEQM 107

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
             +  PHN    C CN                          I +   C   ++  A   
Sbjct: 108 QMLGIPHNL---CTCN--------------------------ILLNCFCRCSQLSLALSF 138

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           LG+M+     P   T+ +                                   L+ G C+
Sbjct: 139 LGKMIKLGHEPSIVTFGS-----------------------------------LLNGFCR 163

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
            +++ +A+ +F  M   G   +   +N +I GLC  ++VD A+ L +     G      T
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ GL    R  D   +++ M       DV  +  LI +  ++ ++ +   F+  M+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           +  L PD  T   L++GL   S+L         +VS     D   Y+ILING  K     
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS-------SVGEEIDSRRFAFDSSSFPDSVS-DI 721
               L   M  +G V +  T+ +L+         +V EEI  RR  F     P+ ++ ++
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI-FRRMVF-CGVHPNIITYNV 401

Query: 722 LAEGL 726
           L  GL
Sbjct: 402 LLHGL 406



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 111/234 (47%), Gaps = 3/234 (1%)

Query: 110 GNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G V E E   + M++    P++    + L++    + R++ A  +   M S G    V  
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSL-LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +++++    + K+     + ++ EM + G+V N  T   L++      ++  A + FRRM
Sbjct: 329 YSILINGYCKSKK-VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G  PN  T+ +++ GL  N +++ ++ IL +M   G+  ++  Y  II  +C+  ++
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            +A  ++  +    LMPD  TY  ++  L +     +A+ +   M   G+ P +
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/562 (22%), Positives = 253/562 (45%), Gaps = 16/562 (2%)

Query: 182 GFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           G   F F ++ +++K G   +   LN +L+ L     +  AL+    +   G   N  ++
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 241 EIVIKGLIANSRVDDSVSILGEMF--------DLGIQLELSFYTCIIPMLCRENKLEEAI 292
            I+I GL  N RV+++V++L  +            ++  +  Y+ +I  LCR   ++E  
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
             +  M    + P+E TY  LI  LC   +  +   ++++MI  GL  +  VF  ++ GL
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265

Query: 353 CEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
           C+ G   E+    ++       P+     AL+   C  G   +A+ + + + +     D 
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N+ I   C+   +R A  +   M    VVP+  TY++ +   CK      A  + + 
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +    L  D ++   L++GLC+ +++ +A+ +F  + ++G +    S+ ILI+G C  R+
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           + +A+ L    +         TY+ ++ GL +  R  +   +L +M V+G   D   Y I
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           L+ ++ ++  L +    FN M+K GL PD      ++ G     ++    +   ++   +
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRF 707
            V D   Y IL N ++K G  S     ++++  +   P       L      E +D +  
Sbjct: 566 LVPDIVTYTILFNAVFKSGSNSYEWKFVNVI--RDINPPPRVLKYLAALCKSEHLDYKCL 623

Query: 708 AFDSSSFPDSVSDILAEGLGNT 729
           A + +S+  S+   +++ +  T
Sbjct: 624 ASEFASYAGSLQTSVSQHIKAT 645



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 228/514 (44%), Gaps = 19/514 (3%)

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
            F    +  +   F ++ K+G   ++     V+KGL  N  V  ++    E+ + G  L 
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMR--------ALDLMPDELTYEELINCLCENLRL 323
              Y  +I  LC   ++ EA+ L +M+            +  + + Y  +I+CLC N  +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPH--NAL 379
           D+  +   +M+  G+ P +  +  ++RGLC VGKF E    +++  + G   S +    L
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 380 LECCCNAGKFFLAKCILEKMADR----KIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           ++  C  G    A+ + ++M +R     I  C +    +   C    +  A EL   +  
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTAL---MGGYCLKGNVDMARELFDAIGE 318

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                D  TY+ F+ G CK+    DA+RVF ++  + +V + ++Y+ L++ LC+  +++ 
Sbjct: 319 WGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSG 378

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E+   M ++G +    +  IL+ GLC  +++D+AI L +    SG +    +YT ++ 
Sbjct: 379 AWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIH 438

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G    +R  + + +L  M ++     +  Y  LI  +    ++ +     N M   G +P
Sbjct: 439 GCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLP 498

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T   LL  L     L       N+++      D   Y I+I+G  K     +A  L 
Sbjct: 499 DTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLF 558

Query: 676 DLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
             M  K  VPD  T+ +L  +      +S  + F
Sbjct: 559 REMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKF 592



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 175/396 (44%), Gaps = 56/396 (14%)

Query: 115 MEGLCQN------------MVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           ++GLC+N            MV   Y PN+     +L+  +     V+ A  +   +   G
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTC-TALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           FK  V  +NV +    +  R   D V V+ EM + G+VPN+ T N L++ L +   +  A
Sbjct: 321 FKRDVWTYNVFIHGYCKVGR-VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            +  + MH+ G  P+  T  I++ GL  + R+D ++ +  ++ + G+  ++  YT +I  
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C   ++ EA+ L + M   +L+P  +TY  LI+ LC + R+ +A  +L +M V G  P 
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              +  ++  L +    DE+V FL                                +M  
Sbjct: 500 TITYSILLDALWKKQHLDEAV-FL------------------------------FNQMIK 528

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF--VLGKCKLCNY 458
           R +  D   + I I   C++E I +A  L   M + ++VPD  TY+     + K    +Y
Sbjct: 529 RGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSY 588

Query: 459 E-DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           E   + V R ++    VL      K +  LC+ E +
Sbjct: 589 EWKFVNVIRDINPPPRVL------KYLAALCKSEHL 618


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 216/485 (44%), Gaps = 6/485 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   + + + + G +P+V + N +L  L +  +++ AL  F  M KK   PNS T+ I
Sbjct: 69  FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNI 127

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I  L    RV+++  IL EM    +   L     ++  LC+  KLEEA ++F+      
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             PD +TY  LI+ L +  ++D+A  + E M+  G      V+  ++R     G+ ++  
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 247

Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
              ++       P     N  ++C   AG+    + I E +     + D  S++I I  L
Sbjct: 248 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  + R+   +   M       D   Y+A V G CK      A  +  ++  + +    
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y  +V+GL +++++ EA  +F      G  L+   ++ LI G   + ++D+A  +   
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G +    T+  ++  LVK +   + LV    M    C  +   Y ILI  +    K
Sbjct: 428 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
                +F+  M K GLVP+  T  +++ GLA    +    S   +  ++  + D++ +N 
Sbjct: 488 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 547

Query: 658 LINGL 662
           LI G+
Sbjct: 548 LIEGM 552



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 134/562 (23%), Positives = 255/562 (45%), Gaps = 25/562 (4%)

Query: 50  YEAKIQSLR-HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           +E K Q L+  ++S   +I VL     L  A ++F  +  + R    A  Y  MI+  G 
Sbjct: 7   HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE-RSVPCAYAYNTMIMGYGS 65

Query: 109 AGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNM------NSG 160
           AG  E+   L + + +ER   P+V  +  S++       +V+ A+ +   M      NS 
Sbjct: 66  AGRFEDAYKLLERL-RERGCIPSVV-SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 123

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            + + +D+  + LG  VEE     D      EM  A + PN+ T+N +++ L +  ++E 
Sbjct: 124 TYNIIIDM--LCLGGRVEEAYRILD------EMEHASLFPNLLTVNIMVDRLCKARKLEE 175

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   F    ++GC P+  T+  +I GL    +VD++  +  +M D G       YT +I 
Sbjct: 176 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 235

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                 + E+  ++FK +      PD       ++C+ +   ++    I ED+   G  P
Sbjct: 236 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 295

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ GL + G+  E+ N      + G+      +NA+++  C +GK   A  IL
Sbjct: 296 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 355

Query: 397 EKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M ++ +     ++   +  L + + + +AY L        +  +   YS+ + G  K+
Sbjct: 356 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 415

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A  +  ++  + L  +  +++ L++ L + E+I EA+  F  M +  C  ++ ++
Sbjct: 416 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 475

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +ILI GLC ++K +KA          G      TYT ++ GL K+    D   +  +   
Sbjct: 476 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 535

Query: 576 EGCALDVEAYCILIQSMSEQNK 597
            G   D  ++  LI+ MS  N+
Sbjct: 536 NGGIPDAASFNALIEGMSNANR 557



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 246/555 (44%), Gaps = 20/555 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           + E+   G+ P+  +   ++ VL +  R+  A + F +M  +   P +  +  +I G  +
Sbjct: 6   FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             R +D+  +L  + + G    +  +  I+  L ++ K++EA+ LF++M+  D  P+  T
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSST 124

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTP---TDDVFVDIVRGLCEVGKFDESVNFLE 366
           Y  +I+ LC   R+++A  IL++M    L P   T ++ VD    LC+  K +E+    E
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD---RLCKARKLEEAYKIFE 181

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
                  +P    + +L++     G+   A  + EKM D    A+   +   IR    + 
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
                +++   ++     PD    + ++    K    E    +F  + +   + D  SYS
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GL +  +  E   +F  M + G +L + ++N ++ G C   KV KA  +       
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
               T +TY  I+ GL K+ R  +  ++  +   +G  L+V  Y  LI    +  ++ + 
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
            L    M+K GL P+  T  SLL  L    +++        +       ++  Y+ILING
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 481

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDS----RRFAFDSSSFP 715
           L +    ++A      M  +G VP+  T+  ++   + VG   D+     RF  +    P
Sbjct: 482 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKAN-GGIP 540

Query: 716 DSVS-DILAEGLGNT 729
           D+ S + L EG+ N 
Sbjct: 541 DAASFNALIEGMSNA 555



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 184/429 (42%), Gaps = 42/429 (9%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L  A KIF+  S Q+       TYC +I  LG  G V+E   L + M+   +        
Sbjct: 173 LEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 231

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+ +F  H R     ++                                    +KE+++
Sbjct: 232 SLIRNFFIHGRKEDGHKI------------------------------------FKELIR 255

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P++  LN  ++ +F+   +E     F  +   G  P+ R++ I+I GL    +  +
Sbjct: 256 RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 315

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + +I   M   G  L+   Y  ++   C+  K+ +A  + + M+   + P   TY  +++
Sbjct: 316 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L +  RLD+A  + E+    G+     ++  ++ G  +VG+ DE+   LE+      +P
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 435

Query: 376 H----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
           +    N+LL+    A +   A    + M + K   +  +++I I  LC  ++  KA+   
Sbjct: 436 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 495

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    +VP+  TY+  + G  K+ N  DA  +F +  A   + D+ S++ L+EG+   
Sbjct: 496 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA 555

Query: 491 EKITEAVEV 499
            +  EA + 
Sbjct: 556 NRAMEAYQA 564



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 166/408 (40%), Gaps = 39/408 (9%)

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A + F  ++A  L PD+++Y  +I  LC+  RL +A ++   M      P    +  ++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 351 GLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           G    G+F+++   L    E  C       N++L C     K   A  + E M      +
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++NI I  LC    + +AY +L  M  +S+ P+  T +  V   CK    E+A ++F 
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
             S +    D ++Y  L++GL                 K G                   
Sbjct: 182 SASQRGCNPDCVTYCSLIDGL----------------GKKG------------------- 206

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           +VD+A RL      +G +     YT ++       R +D   +  +++  GC  D+    
Sbjct: 207 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 266

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
             +  + +  +++   + F  +   G +PD  +   L+HGL    Q    S+  + +   
Sbjct: 267 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 326

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              LD+  YN +++G  K G   +A  +L+ M  K   P   T+G +V
Sbjct: 327 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 374


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 145/641 (22%), Positives = 287/641 (44%), Gaps = 56/641 (8%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ +F        A+ V   M+  G    +   + +LG +V++  G    V V+ ++V  
Sbjct: 162 LMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVA-VMVFDQIVGT 220

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           GIVP+V   + ++    +  R++ A++   +M K+G  PN  T+  ++ G +     +  
Sbjct: 221 GIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV 280

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP-DELTYEELIN 315
             +L  M + G+   +   T ++   C++ K++EA +L + +   +L+  DE  Y  L++
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C+  R++DA  I ++M+ +GL     +   +++G C++G+  E+         +   P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400

Query: 376 ----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
               +N LL+  C  GK   A  + E+M  D       ++N  I+ L +      A  L 
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLW 460

Query: 431 GRMVVSSVVPD----CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             MV   V P+    C     F     K+ + + A+ +++++  +     +++++ ++ G
Sbjct: 461 HLMVERGVTPNEISCCTMLDCFF----KMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC++ K+ EA  VF  M + G S    ++  L  G C    V +A +++ +      S +
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSAS 576

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y  ++ GL K+++  D+  +L +M   G + +V  Y  LI    ++ KL      + 
Sbjct: 577 IEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYF 636

Query: 607 VMVKAGLVPD------------RETMLS----LLHGLADGSQLHLVSSGINKLVSD---- 646
            M++ G  P+            R+  +S    +L  + D   L + +   +KLV +    
Sbjct: 637 EMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTL 696

Query: 647 -----SEVLDSS----------MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-- 689
                ++ LD S          +YNI I+GL K G   +A  +L +++ +G++PD  T  
Sbjct: 697 EAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYC 756

Query: 690 ---HGLLVGSSVGEEIDSRRFAFDSSSFPD-SVSDILAEGL 726
              H   V  +V E    R    +    P+ ++ + L  GL
Sbjct: 757 TLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGL 797



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 135/627 (21%), Positives = 258/627 (41%), Gaps = 114/627 (18%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDT 204
           RV+ AM VL  M   G + +V  +N ++   V   RG F     V + M + G+  NV T
Sbjct: 241 RVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYV--GRGDFEGVERVLRLMSERGVSRNVVT 298

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
              L+    +  +++ A    R + +      + R + +++ G     R++D+V I  EM
Sbjct: 299 CTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEM 358

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
             +G+++ +     +I   C+  ++ EA R+F  M   +L PD  +Y  L++  C   ++
Sbjct: 359 LRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKV 418

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-----------EDKC--- 369
             A  + E+M+  G+TPT   +  +++GL +VG +D++++             E  C   
Sbjct: 419 SKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTM 478

Query: 370 -----------------------GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI 404
                                  G+  S    N ++   C  GK   A  + ++M +  +
Sbjct: 479 LDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGL 538

Query: 405 A-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + D  ++       C+N  +++A+++ G M   ++      Y++ + G  K+    D   
Sbjct: 539 SPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTD 598

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-------CSLSSSS-- 514
           +  ++  + L  + ++Y  L+ G C  +K+ +A  ++  M + G       CS   SS  
Sbjct: 599 LLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLY 658

Query: 515 -----------------FNIL-IYGLCV--MRKVDKAIRLRSLAYSSGTSYTTST----- 549
                            F+IL ++  C   + K D  +  + +A S   S   ++     
Sbjct: 659 RDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNI 718

Query: 550 -YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y   + GL K  +  +   VL+ ++  G   D   YC LI + S    + +     + M
Sbjct: 719 VYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEM 778

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           ++ GL+P                                   + ++YN LINGL K G  
Sbjct: 779 LEKGLIP-----------------------------------NITIYNALINGLCKLGNI 803

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVG 695
            +A  L   +  KG VP+A T+ +L+G
Sbjct: 804 DRAQRLFYKLYQKGLVPNAVTYNILIG 830



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/517 (22%), Positives = 209/517 (40%), Gaps = 88/517 (17%)

Query: 115 MEGLCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGGF 162
           ++G CQ    E    +R+ ++            +L+  +    +V  A RV V M     
Sbjct: 339 VDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNL 398

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K     +N +L     E +    F+   +EM+  GI P V T N +++ L +    + AL
Sbjct: 399 KPDCYSYNTLLDGYCREGKVSKAFMLC-EEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             +  M ++G  PN  +   ++         D ++ +  E+   G       +  +I  L
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN---------------------- 320
           C+  KL EA  +F  M+ L L PDE+TY  L +  C+N                      
Sbjct: 518 CKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASI 577

Query: 321 -------------LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
                         +L+D  D+L +M   GL+P    +  ++ G C+  K D++ +   +
Sbjct: 578 EMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFE 637

Query: 368 KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMAD---------------------- 401
                 +P+    + ++       +   A  IL+KM D                      
Sbjct: 638 MIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLE 697

Query: 402 -RKIAD-------CDS------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
            +KIAD       C+S      +NI I  LC++ ++ +A  +L  ++    +PD  TY  
Sbjct: 698 AQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCT 757

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +       N ++A ++  ++  + L+ +   Y+ L+ GLC++  I  A  +F  + + G
Sbjct: 758 LIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKG 817

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              ++ ++NILI   C +  +DKA RLR      G S
Sbjct: 818 LVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 208/473 (43%), Gaps = 10/473 (2%)

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           S  F++++K          ++ +  EM  +G    L   + ++  L ++ +   A+ +F 
Sbjct: 156 SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            +    ++PD      ++N  C+  R+D A ++LE M+  GL P    +  +V G    G
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 357 KFD--ESVNFLEDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRK--IADCDSW 410
            F+  E V  L  + G   +      L+   C  GK   A+ +L ++ + +  + D   +
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
            + +   C+   +  A  +   M+   +  +    +  + G CKL    +A RVF  +  
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
            +L  D  SY+ L++G C+  K+++A  +   M  +G + +  ++N +I GL  +   D 
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ L  L    G +    +   ++    K+  +   +++  ++L  G      A+  +I 
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
            + +  KL +    F+ M + GL PD  T  +L  G      +    +   K V + + +
Sbjct: 516 GLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQ--EAFQIKGVMERQAM 573

Query: 651 DSS--MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
            +S  MYN LI+GL+K    +  + LL  M  +G  P+  T+G L+     E+
Sbjct: 574 SASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQ 626



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM++ G++PN+   N L+  L +   I+ A   F ++++KG  PN+ T+ I+I       
Sbjct: 777 EMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIG 836

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIP 280
            +D +  +  +M + GI       T IIP
Sbjct: 837 DLDKASRLREKMTEEGIS------TRIIP 859


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 227/472 (48%), Gaps = 28/472 (5%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G  L++   NV+L  +V+  R F     +Y+EM+  G+ P+V T   L++       +  
Sbjct: 142 GAALTIQACNVLLYVLVKTGR-FELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLR 200

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A + F  M  KG  P    + I+I+GL ++++++++ S+   M ++G+   +  Y  ++ 
Sbjct: 201 AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD 260

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C+    ++A+RL++ M    L+PD +T+  LI+ LC+   +  A ++  +MI   +TP
Sbjct: 261 GYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTP 320

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
              V+  ++   C+VG   E++    +   +  SP    ++ L+   C+  +   A  I 
Sbjct: 321 NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           EKM    I A+  ++N  I   C+  ++ KA E+  +M  + V P+  T+S  + G CK+
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N + A+ ++ ++  +SL  D ++Y+ +++G C+   + EA++++  M  NG + +  + 
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + L+ GLC   K+  A+ L    ++    + T          V    +K  L        
Sbjct: 501 SCLLDGLCKDGKISDALEL----FTEKIEFQTPRCN------VDAGGSKPSLT------- 543

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
                +  AY  LI  + +  +       F+ M + GL PD    + +L GL
Sbjct: 544 -----NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 222/520 (42%), Gaps = 61/520 (11%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K G    +   N LL VL +T R E     +  M   G  P+  TF  +I G      + 
Sbjct: 140 KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLL 199

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +  +  EM   GI   +  YT +I  LC +NK+EEA  + + MR + + P+  TY  L+
Sbjct: 200 RAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLM 259

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +  C+      A  + +DM+  GL P    F  ++ GLC+ G+   + N   +   +  +
Sbjct: 260 DGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           P+ A+                              +N  I   C+  ++ +A  L   + 
Sbjct: 320 PNIAV------------------------------YNSLIDAYCKVGDVSEAMALFLELE 349

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              V PD  TYS  + G C +   E+A  +F +++ + ++ +S++Y+ L++G C+  K+ 
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A+E+   M++NG   +  +F+ LI G C +R +  A+ + S       S    TYT ++
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMI 469

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK---- 610
            G  K    K+ L + + ML  G   +      L+  + +  K+ D    F   ++    
Sbjct: 470 DGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTP 529

Query: 611 ------AGLVP---DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL----DSSMYNI 657
                  G  P   +     +L+HGL    Q     S   KL SD        D  +Y +
Sbjct: 530 RCNVDAGGSKPSLTNHVAYTALIHGLCQDGQF----SKAVKLFSDMRRYGLQPDEVIYVV 585

Query: 658 LINGLWKEGLTSQASYLLDL----MLGKGWVPDATTHGLL 693
           ++ GL+      Q  Y+L +    ML  G +P++  H +L
Sbjct: 586 MLRGLF------QVKYILMMLHADMLKFGVIPNSAVHVIL 619



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 220/504 (43%), Gaps = 48/504 (9%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV     L+ VL +   +E AL  +   HK G     +   +++  L+   R +    I
Sbjct: 115 PNV--YGELIIVLCKMELVEEALSMY---HKVGAALTIQACNVLLYVLVKTGRFELLWRI 169

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM   G+   +  +  +I   CR+  L  A  +F  MR   ++P  + Y  LI  LC 
Sbjct: 170 YEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCS 229

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
           + ++++A  +   M  +G+ P    +  ++ G C++    +++   +D  G         
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLG--------- 280

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                                +  + D  ++ I I  LC+  E++ A  L   M+  SV 
Sbjct: 281 ---------------------EGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+ A Y++ +   CK+ +  +A+ +F ++    +  D  +YS L+ GLC V +  EA  +
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNI 379

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+K G   +S ++N LI G C   K+DKA+ + S    +G      T++ ++ G  K
Sbjct: 380 FEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           ++  +  + + ++M+++  + DV  Y  +I    +   +K+    ++ M+  G+ P+  T
Sbjct: 440 IRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYT 499

Query: 620 MLSLLHGL-ADGS------------QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           +  LL GL  DG             +       ++   S   + +   Y  LI+GL ++G
Sbjct: 500 ISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDG 559

Query: 667 LTSQASYLLDLMLGKGWVPDATTH 690
             S+A  L   M   G  PD   +
Sbjct: 560 QFSKAVKLFSDMRRYGLQPDEVIY 583


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/521 (23%), Positives = 233/521 (44%), Gaps = 41/521 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +  + K  ++  V +   +   GI P++ TLN L+       +I        ++
Sbjct: 62  FNKILDSFAKIKH-YSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P++ TF  +IKGL    +V+ ++    ++   GI+ +   Y  +I  +C+    
Sbjct: 121 LKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDT 180

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI+L + +      P+   Y  +I+ LC+   + +A  +  +M   G++     +  +
Sbjct: 181 RGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTL 240

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C   K  E++  L +      +P    +N L++  C  GK   AK +L  M    +
Sbjct: 241 IYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACV 300

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  +++  +       E++KA  +   M +  V PD  +Y+  + G CK    ++AL 
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALN 360

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F+++  +++V   ++YS L++GLC+  +I+   ++   M   G   +  ++N LI GLC
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLC 420

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               +D+AI L +     G    + T+T ++ GL K  R KD       +L +G  LDV 
Sbjct: 421 KNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVY 480

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y ++I    +Q  L++     + M + G VP+  T                        
Sbjct: 481 KYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVT------------------------ 516

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
                      ++I+IN L+K+    +A  LL  M+ +G +
Sbjct: 517 -----------FDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 217/517 (41%), Gaps = 40/517 (7%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V  +  M+     P +   N +L+   +     +A+    R+  KG  P+  T  I+I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  ++    S+L ++   G Q     +T +I  LC + ++ +A+     + A  + 
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            D+++Y  LIN                                   G+C++G    ++  
Sbjct: 162 FDQVSYGTLIN-----------------------------------GVCKIGDTRGAIKL 186

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           +    G +T P    +N +++  C       A  +  +M  + I AD  ++   I   C 
Sbjct: 187 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCI 246

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++++A  LL  MV+ ++ P+  TY+  V   CK    ++A  V   +    +  D I+
Sbjct: 247 ASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVIT 306

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L++G   V ++ +A  VF  MS  G +    S+ ILI G C  + VD+A+ L    +
Sbjct: 307 YSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMH 366

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TY+ ++ GL K  R   +  ++ +M   G   +V  Y  LI  + +   L 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLD 426

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                FN M   G+ P   T   LL GL  G +L         L++    LD   YN++I
Sbjct: 427 RAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMI 486

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           NG  K+GL  +A  +L  M   G VP+A T  +++ +
Sbjct: 487 NGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINA 523



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 196/459 (42%), Gaps = 33/459 (7%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+VS    M  +     +  +  I+    +      A+ L   +    + PD +T   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LINC C   ++     +L  ++  G  P    F  +++GLC  G+ +++++F        
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHF-------- 151

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
              H+ LL       KF                D  S+   I  +C+  + R A +L+ +
Sbjct: 152 ---HDKLL---AQGIKF----------------DQVSYGTLINGVCKIGDTRGAIKLVRK 189

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +      P+   Y+  +   CK     +A  +F +++A+ +  D ++Y+ L+ G C   K
Sbjct: 190 IDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASK 249

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA+ +   M     + +  ++NIL+  LC   KV +A  + ++   +       TY+ 
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYST 309

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL-FFNVMVKA 611
           +M G   +   K    V   M + G   DV +Y ILI     +NK+ D AL  F  M + 
Sbjct: 310 LMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFC-KNKMVDEALNLFKEMHQK 368

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +VP   T  SL+ GL    ++  V   I+++       +   YN LI+GL K G   +A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRA 428

Query: 672 SYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
             L + M  +G  P + T  +L+ G   G  +   + AF
Sbjct: 429 IALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAF 467



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 164/356 (46%), Gaps = 15/356 (4%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN-VVLGAIVEEKRGFADF 186
           PNV E   +++ +   +  V+ A  +   M + G    V  +  ++ G  +  K    + 
Sbjct: 197 PNV-EMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASK--LKEA 253

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + +  EMV   I PNV T N L++ L +  +++ A +    M K    P+  T+  ++ G
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDG 313

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 +  +  +   M  +G+  ++  YT +I   C+   ++EA+ LFK M   +++P 
Sbjct: 314 YFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---N 363
            +TY  LI+ LC++ R+    D++++M   G+      +  ++ GLC+ G  D ++   N
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFN 433

Query: 364 FLEDK----CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLC 418
            ++D+    C +  +    LL+  C  G+   A+   + +  +    D   +N+ I   C
Sbjct: 434 KMKDQGIRPCSFTFT---ILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           +   + +A  +L +M  +  VP+  T+   +    K    + A ++ RQ+  + L+
Sbjct: 491 KQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 1/302 (0%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + +  A     RM+     P    ++  +    K+ +Y  A+ +  ++  + +  D I+ 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+   C + +IT    V   + K G    + +F  LI GLC+  +V+KA+       +
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G  +   +Y  ++ G+ K+   +  + ++ ++       +VE Y  +I ++ +   + +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M   G+  D  T  +L++G    S+L      +N++V  +   +   YNIL++
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSFPDSVS 719
            L KEG   +A  +L +ML     PD  T+  L+ G  +  E+   +  F++ S      
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 720 DI 721
           D+
Sbjct: 338 DV 339


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 218/473 (46%), Gaps = 21/473 (4%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           SV  F  +L ++V+ K  +   + ++ ++   GI PN+ +L+ L+       ++  A   
Sbjct: 70  SVIEFGKILSSLVKLKH-YPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F ++ K G  PN+ T   ++KG   N +V +++     +  LG       Y  +I  LC+
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +   A+++ + +    +  D + Y  +I+ LC++  ++DA ++  +MI   ++PT   
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC-ILEKM 399
              ++ G C VG+F E+   L +      +P     N L++  C  GK   AK  I   M
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            +  + D  +++  +   C   E+ KA  +               YS  + G CK+   +
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YSIVINGFCKIKMVD 353

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            AL +F ++  + +  D+++Y+ L++GLC+  +I+ A E+   M  +G      ++N LI
Sbjct: 354 KALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLI 413

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             LC    VDKAI L       G      TY  ++ GL K  R KD  V+   +L++G  
Sbjct: 414 DALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYN 473

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           L V  Y I+I  +  +  L +     + M   G VPD  T  +++  L +  +
Sbjct: 474 LTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDK 526



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 199/478 (41%), Gaps = 25/478 (5%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            VDD VS    M  L     +  +  I+  L +       I LF  +    + P+ ++  
Sbjct: 51  HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLS 110

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG- 370
            LINC C   ++  A  I   ++ +G  P       +V+G C   K  E+++F +     
Sbjct: 111 ILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL 170

Query: 371 ---YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
              +    +  L+   C  G+   A  +L ++  + ++ D   ++  I  LC+++ +  A
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDA 230

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           YEL   M+   + P   T ++ + G C +  +++A  + R++  +++  D  +++ LV+ 
Sbjct: 231 YELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDA 290

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+  KI EA      M K G      +++ L+ G C++ +V+KA               
Sbjct: 291 LCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKA--------------- 335

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y+ ++ G  K++     L +  +M     A D   Y  LI  + +  ++       +
Sbjct: 336 KHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVD 395

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M  +G   D  T  SL+  L     +    + + K+      LD   YNILI+GL K+G
Sbjct: 396 EMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQG 455

Query: 667 LTSQASYLLDLMLGKG-----WVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
               A  +   +L KG     W      +GL +   + E         D+   PD+V+
Sbjct: 456 RLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVT 513


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 231/534 (43%), Gaps = 38/534 (7%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G+  ++  +N +L    ++ R  A    +   M   GI  +V T N L++ L + N
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLI-DRMESKGIEADVCTYNMLIDDLCKNN 59

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R        ++M K+   PN  T+  +I GL+   ++  +  +  EM  L +      Y 
Sbjct: 60  RSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYN 119

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C     E+A+RL  +M A  L PDE+ Y  L++ L +  + D A  ++E + + 
Sbjct: 120 ILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMS 179

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+      +  ++ GLC+ G  DES+  L+       SP                     
Sbjct: 180 GMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASP--------------------- 218

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
                    D  ++++ I   C+  +I+ A E++ +M  + + P+   Y+  +   CK  
Sbjct: 219 ---------DIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKG 269

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           +  +A R +  ++     +D    + L+  LC+  ++ EA +    MS    + +S +F+
Sbjct: 270 DITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFD 329

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQM 573
            +I G  ++    KA  +       G   +  TY  ++ GL K   L+ AK LL  L  +
Sbjct: 330 CIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHI 389

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA-DGSQ 632
                A+D   Y  ++    ++ KL D    F  MV+  ++PD  T   +L GL+  G  
Sbjct: 390 ---PAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKM 446

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           +  +      L   +   +  MY  L +GL+K G ++ ASY+ + M  KG  PD
Sbjct: 447 VPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPD 500



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 124/567 (21%), Positives = 244/567 (43%), Gaps = 48/567 (8%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +N ++  +++E++       V+ EM+   + PN  T N L++   +    E AL     
Sbjct: 82  TYNTLINGLMKERK-IGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDV 140

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  KG  P+   +  ++ GL   ++ D + S++  +   G+ +    YT +I  LC+   
Sbjct: 141 MEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGL 200

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+E+++L  MM      PD +T+  LIN  C+  ++ +A +++  M   GL P   ++  
Sbjct: 201 LDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYAT 260

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPH-------NALLECCCNAGKFFLAKCILEKMA 400
           ++   C+ G   E+     +      + H       N L+   C AG+   A+  +  M+
Sbjct: 261 LIYNSCKKGDITEA---FRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMS 317

Query: 401 DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
              +A +  +++  I       +  KA+ +   M+     P   TY + + G CK  N  
Sbjct: 318 TIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLR 377

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A ++  ++      +D+  Y+ ++   C+  K+++AV +F  M +      S ++ I++
Sbjct: 378 EAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIIL 437

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGT-SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
            GL    K+  A+     A + GT S     YT +  GL K+ ++     +  +M  +G 
Sbjct: 438 AGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGI 497

Query: 579 ALDVEA-----------------------------------YCILIQSMSEQNKLKDCAL 603
             D  A                                   Y IL+   S++  L  C+ 
Sbjct: 498 NPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSK 557

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
           F+N+M + G+ PD+ T  S++ GL     L +    + K++ +  ++D    N+LI    
Sbjct: 558 FYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSC 617

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTH 690
           +     +A  LL++    G +PD  T+
Sbjct: 618 ETDKMGKAFDLLNIKNLLGIIPDVNTY 644



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 117/582 (20%), Positives = 255/582 (43%), Gaps = 9/582 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+++      +  A R    M   G  +   + NV++ ++    R  A+     + M  
Sbjct: 260 TLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGR-VAEAEDFMRHMST 318

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + PN  T + ++           A   F  M K G CP+  T+  ++KGL     + +
Sbjct: 319 IDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLRE 378

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L ++  +   ++ + Y  I+   C+  KL +A+ LF  M   +++PD  TY  ++ 
Sbjct: 379 AKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILA 438

Query: 316 CLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
            L    ++  A    E  +  G L+P   ++  +  GL +VG+ + +    E+      +
Sbjct: 439 GLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGIN 498

Query: 375 PH----NALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYEL 429
           P     NA+L+     GK    + +  KM    +     ++NI +    + +++ K  + 
Sbjct: 499 PDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKF 558

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              M    + PD  T  + +LG CK    +   ++ +++  +  ++D ++ + L+   C+
Sbjct: 559 YNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCE 618

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
            +K+ +A ++    +  G     +++N +  GL     + ++  L       G + T++ 
Sbjct: 619 TDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQ 678

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ G+ ++   +    +  +M   G +    A   +++ +++  K+++  L  + M+
Sbjct: 679 YISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCML 738

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           +  L+P   T  +L+H L   ++L        K+      LD   YN+LI+GL  +G   
Sbjct: 739 QKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDAL 798

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS-SVGE-EIDSRRFAF 709
            A  L + M  +G  P+ TT+  L+ + S  E E++ R   +
Sbjct: 799 AAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVY 840



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 3/323 (0%)

Query: 370 GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           GYV +   +N +L  CC  G++  A  ++++M  + I AD  ++N+ I  LC+N    K 
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           Y LL +M    + P+  TY+  + G  K      A RVF ++   +L  + ++Y+ L++G
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDG 124

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C      +A+ +   M   G      ++  L+ GL  + K D A  L      SG    
Sbjct: 125 HCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVG 184

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              YT ++ GL K     + L +L  M  +G + D+  + +LI    +  K+K+      
Sbjct: 185 YRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVIC 244

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M KAGL P+     +L++       +         +      +D  + N+LI+ L + G
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 667 LTSQASYLLDLMLGKGWVPDATT 689
             ++A   +  M      P++ T
Sbjct: 305 RVAEAEDFMRHMSTIDLAPNSIT 327



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 114/289 (39%), Gaps = 35/289 (12%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  + W C+    + A +L+ RM    +  D  TY+  +   CK         + +++
Sbjct: 12  TYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKM 71

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + +  +  +Y+ L+ GL +  KI  A  VF  M     S +  ++NILI G C     
Sbjct: 72  RKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNF 131

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++A+RL  +  + G       Y  ++ GL KL +      ++ ++ + G  +   AY  +
Sbjct: 132 EQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAM 191

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  + +   L +     ++M K G  PD  T                             
Sbjct: 192 IDGLCKHGLLDESLQLLDMMFKDGASPDIIT----------------------------- 222

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
                 +++LING  K G    A  ++  M   G  P+   +  L+ +S
Sbjct: 223 ------FSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNS 265


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 235/541 (43%), Gaps = 8/541 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +F  +L  + + KR       + + M + G   NV + N LL+ L    R E AL+    
Sbjct: 130 IFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHM 189

Query: 228 MHKKG---CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           M   G     PN  T+  VI GL     VD +  +   M D G++     YTC+I     
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             K +E +++ + M    L PD + Y  L++ LC+N R  +A +I + +I  G+ P   +
Sbjct: 250 TGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTI 309

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA--GKFFL--AKCILEKMA 400
           +  ++ G    G   E  +FL+       SP + +     NA   K  +  A  I +KM 
Sbjct: 310 YGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMR 369

Query: 401 DRKIAD-CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            + ++    ++   I  LC+   +  A     +M+   V PD   +S+ V G C +  +E
Sbjct: 370 QQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWE 429

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A ++F +V  Q + L++  ++ L+  LC+  ++ EA  +   M +        S+N L+
Sbjct: 430 KAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLV 489

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C+  ++D+A +L  +  S G      TY  ++ G  K +R  D   +  +ML++G  
Sbjct: 490 DGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLT 549

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
             V  Y  ++  + +  +  +    +  M+      D  T   +L+GL   + +      
Sbjct: 550 PGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKM 609

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
              L S    LD    NI+I  L K G    A  L   +   G VPD  T+ L+  + + 
Sbjct: 610 FQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIK 669

Query: 700 E 700
           E
Sbjct: 670 E 670



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 238/544 (43%), Gaps = 17/544 (3%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD--FVFVYKEMVK---AGIVPN 201
           ++ A+++   M +     SV  FN +L  +   +   A    V ++  M++     + P+
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKG-CCPNSRTFEIVIKGLIANSRVDDSVSI- 259
             T   L+       R++     F  + K G    N+  F  ++KGL    RVD++  I 
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD----LMPDELTYEELIN 315
           L  M + G  L +  Y  ++  LC E + EEA+ L  MM A D      P+ +TY  +I+
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMM-ADDGDGSHTPNVVTYTTVID 210

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+   +D A  + + MI  G+ P +  +  ++ G    GK+ E V  L++   +   P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               +  LL+  C  G+   A+ I + +  + I      + I +        + + +  L
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             MV + V PD   ++       K    ++A+ +F ++  Q L    ++Y  L++ LC++
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +AV  F  M   G +     F+ L+YGLC + K +KA +L       G     + +
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             +M  L +  R  +   ++  ML      DV +Y  L+       ++ + A   +VMV 
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            GL PD  T  +LLHG     ++    S   +++          YN +++GL++ G   +
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCE 570

Query: 671 ASYL 674
           A  L
Sbjct: 571 AKEL 574



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 227/483 (46%), Gaps = 5/483 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           + + V + +EM   G+ P+      LL+ L +  R   A + F  + +KG  P+   + I
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGI 312

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++ G      + +  S L  M   G+  +   +  +     ++  ++EA+ +F  MR   
Sbjct: 313 LLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQW 372

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L P  + Y  LI+ LC+  R+DDA      MI  G+TP   VF  +V GLC V K++++ 
Sbjct: 373 LSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 363 N-FLE--DKCGYVTSPHNALLEC-CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             F E  D+   + +    +L C  C  G+   A+ +++ M    +  D  S+N  +   
Sbjct: 433 KLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGH 492

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C    I +A +LL  MV   + PD  TY+  + G CK    +DA  +FR++  + L    
Sbjct: 493 CLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGV 552

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ ++ GL Q+ +  EA E++  M  N       ++ I++ GLC    VD+A ++   
Sbjct: 553 VTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQS 612

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S        T   ++  L+K  R +D + + A +   G   DVE Y ++ +++ ++  
Sbjct: 613 LCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGS 672

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L++    F+ M + G  P+   + +L+  L     +      ++KL   +  L++S  ++
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSM 732

Query: 658 LIN 660
           LI+
Sbjct: 733 LIS 735



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 179/357 (50%), Gaps = 6/357 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +FN++  A  + K    + + ++ +M +  + P V     L++ L +  R++ A+ +F +
Sbjct: 344 IFNIMFNAYAK-KAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQ 402

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +G  P+   F  ++ GL    + + +  +  E+ D GI+L  +F+  ++  LCRE +
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGR 462

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           + EA RL  +M  +D+ PD ++Y  L++  C   R+D+A  +L+ M+ IGL P +  +  
Sbjct: 463 VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT 522

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI-LEKMADR 402
           ++ G C+  + D++ +   +      +P    +N +L      G+F  AK + L  + +R
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNR 582

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  D  ++ I +  LC N  + +A+++   +    +  D  T +  +    K    EDA+
Sbjct: 583 RKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAM 642

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            +F  +SA  LV D  +Y  + E L +   + E  E+F  M +NG + +S   N L+
Sbjct: 643 DLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 208/472 (44%), Gaps = 25/472 (5%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCR---ENKLEEAIRLF-KMMR--ALDLMPD 306
           +DD++ +  EM        +  +  ++ ++ R    +  E  + LF +M+R  ++ + P 
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDESVNFL 365
             TY  LI C C   RL         ++  G +  + V F  +++GLC+  + DE+ + L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 366 -----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP------- 413
                E  C      +N LL+  CN  +   A  ++  MAD    D D  + P       
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMAD----DGDGSHTPNVVTYTT 207

Query: 414 -IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC+ + + +A  +   M+   V P+  TY+  + G      +++ +++ +++S   
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  D + Y+ L++ LC+  + TEA  +F  + + G     + + IL++G      + +  
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMH 327

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
               L   +G S     +  +     K     + + +  +M  +  +  V  Y  LI ++
Sbjct: 328 SFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDAL 387

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +  ++ D  L FN M+  G+ PD     SL++GL    +         +++     L++
Sbjct: 388 CKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNA 447

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEID 703
           + +NIL+  L +EG   +A  L+DLML     PD  ++  LV G  +   ID
Sbjct: 448 AFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRID 499



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 49/292 (16%)

Query: 429 LLGRMVVS---SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD-SISYSKLV 484
           L  RM+      V P   TY+  +   C++   +     F  +      L+ ++ + +L+
Sbjct: 76  LFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLL 135

Query: 485 EGLCQVEKITEAVEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +GLC  +++ EA ++    M + GC+L+  S+NIL+ GLC  ++ ++A+ L  +    G 
Sbjct: 136 KGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGD 195

Query: 544 SYTTS---TYTKIMLGLVKLQ---RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              T    TYT ++ GL K Q   RAK +                               
Sbjct: 196 GSHTPNVVTYTTVIDGLCKAQMVDRAKGV------------------------------- 224

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
                  F  M+  G+ P+  T   L+HG     +   V   + ++ +     D  +Y +
Sbjct: 225 -------FQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAV 277

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
           L++ L K G  ++A  + D ++ KG  P  T +G+L+     E   S   +F
Sbjct: 278 LLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSF 329



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A ++  ++ S   +L +   N+++GA+++  R   D + ++  +   G+VP+V+T  
Sbjct: 603 VDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRK-EDAMDLFATISAYGLVPDVETYR 661

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            + E L +   +E   + F  M + G  PNSR    +++ L+    +  +   L ++ + 
Sbjct: 662 LIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEK 721

Query: 267 GIQLELSFYTCIIPMLCR 284
              LE S  + +I +  R
Sbjct: 722 NFSLEASTTSMLISIYSR 739


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 216/456 (47%), Gaps = 6/456 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V+ K   +  + ++++M   GI  +  T N L+    +      +   F ++
Sbjct: 64  FNKILSSLVKAKH-HSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKI 122

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            KKG  P + TF  +IKGL     +  ++    ++   G  L+   Y  +I  LC+  ++
Sbjct: 123 LKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRI 182

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A++L K +    + P+ + Y  +I+ +C+   ++DA D+   M+   + P    +  +
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI 404
           + G   V K + +++          +P+    N L++  C  GK   AK +L  M    I
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N  +   C   ++ KA ++   M    V+ +   Y+  V G CK+   ++A+ 
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F ++  + ++ + ++YS L++GLC++ +I  A+++   M   G   +  +++ ++  LC
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
               VDKAI L +     G      TYT ++ GL +  R +D   V   +LV+G  LDV 
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           AY ++IQ   ++          + M   G +P+ +T
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKT 518



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 192/431 (44%), Gaps = 5/431 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +++K G  P   T N L++ L     I  AL    ++  +G   +  ++  +I GL 
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R+  ++ +L  +    +Q     Y  II  +C+   + +A  L+  M A  + PD  
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNF 364
           TY  LI+      +L+ A D+   M    + P    F  +V G C+ GK +++       
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEI 423
           ++D        +N+L++  C+  K   AK I + MA    IA+   +   +   C+ + +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A  L   M    ++P+  TYS+ + G CKL     AL++  ++  +    + ++YS +
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++ LC+   + +A+ +   +   G      ++ ILI GLC   +++ A  +       G 
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           +     YT ++ G          L +L++M   GC  + + Y ++I S+ E+++      
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEK 537

Query: 604 FFNVMVKAGLV 614
               M+  GL+
Sbjct: 538 LLREMIVRGLL 548



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 201/469 (42%), Gaps = 54/469 (11%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN-DILEDM 333
           +  I+  L +      A+ L + M    +  D  T+  LINC  + L L+  +  I   +
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQ-LGLNSLSFSIFAKI 122

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCC 384
           +  G  PT   F  +++GLC  G   ++++F +         D+  Y T     L+   C
Sbjct: 123 LKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT-----LINGLC 177

Query: 385 NAGKFFLAKCILEKMADRKIADCDS--WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
             G+   A  +L+++ D K+   ++  +N+ I  +C+ + +  A++L  +MV   + PD 
Sbjct: 178 KVGRITAALQLLKRV-DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDV 236

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+A + G   +     A+ +F ++  +++  +  +++ LV+G C+  K+ +A  V   
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT-----SYTTS--------- 548
           M K+       ++N L+ G C + KV+KA  +     S G       YTT          
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356

Query: 549 ---------------------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
                                TY+ ++ GL KL R    L ++ +M   G   ++  Y  
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           ++ ++ + + +         +   G+ PD  T   L+ GL    +L    +    L+   
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             LD   Y ++I G   +G   +A  LL  M   G +P+A T+ L++ S
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILS 525



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 1/222 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +VN A  +  +M SGG   +V ++  ++    + K    + + +++EM    I+PNV T 
Sbjct: 321 KVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM-VDEAINLFEEMRCRKIIPNVVTY 379

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L++ L +  RI  AL     MH +G  PN  T+  ++  L  N  VD ++++L  + D
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKD 439

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI+ ++  YT +I  LC+  +LE+A  +F+ +       D   Y  +I   C+    D 
Sbjct: 440 QGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           A  +L  M   G  P    +  ++  L E  + D +   L +
Sbjct: 500 ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLRE 541


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 223/502 (44%), Gaps = 42/502 (8%)

Query: 163 KLSVDVFNVVLGAI------------VEEKRGFADFVFVYKEM----VKAGIV------- 199
           KLS D F  VLG +               + GF+  +F    +    V+ G +       
Sbjct: 60  KLSRDTFGGVLGRLRCTCNALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFF 119

Query: 200 ------PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
                 PNV + N LL      +  E      R M  +G   N  T  +++  L A   +
Sbjct: 120 QSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDL 179

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           D +VS    +     +  L  YT ++  LC+ +K+E A  +F+ M      PD + Y  L
Sbjct: 180 DKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSL 239

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KC 369
           I+ L +  R+D+A  +++ M+  G  PT   +  IV GLC+ G+  E+V  +++    + 
Sbjct: 240 IDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL 299

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWL---CENEEIRK 425
                 ++ ++      GK   A  ++E+MADR  A D  S+ + I  L      EE  K
Sbjct: 300 RPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEK 359

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            +E    MV     PD  TY   +   CK  +   A  V R +   ++  +   Y+ +++
Sbjct: 360 VFET---MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 416

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G  +  ++ EA+E++  + K+G   S+ ++N +I  LC ++K+D+A+ L           
Sbjct: 417 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 476

Query: 546 TTS--TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             S  TY+ I+ GL K+   +    +LA+M+  G   D   Y  LIQ+++   K+     
Sbjct: 477 EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 536

Query: 604 FFNVMVKAGLVPDRETMLSLLH 625
               M+KAG+ PD  T  +L+ 
Sbjct: 537 LLEEMLKAGIFPDDHTYGTLVQ 558



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/449 (19%), Positives = 198/449 (44%), Gaps = 31/449 (6%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
            DL  A+  F  VS  K  + T  TY  ++  L  A  VE    + + M+++ Y     A
Sbjct: 177 RDLDKAVSYFNSVSPNK-CEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIA 235

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
             SL+       RV+ A +++  M + G   +   +  ++  + +  R   + V   +EM
Sbjct: 236 YSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGR-IQEAVKTIQEM 294

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            +  + P VDT ++++       ++E A      M  + C P++ ++ + I+ L +  R 
Sbjct: 295 RRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 354

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           +++  +   M + G + ++  Y  II   C+E  +  A  + ++M    + P+   Y  +
Sbjct: 355 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMI 414

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           ++   ++ RL++A ++ + ++  G+ P+   +  ++  LC++ K DE++  L +      
Sbjct: 415 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE------ 468

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
                                 +++  +       ++++ I  L +     +A++LL  M
Sbjct: 469 ----------------------MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 506

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           + + V+PDC TY++ +           A+ +  ++    +  D  +Y  LV+ LC+ + +
Sbjct: 507 IDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-V 565

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             A ++   M +NG + +  +F  +  G 
Sbjct: 566 DAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 148/350 (42%), Gaps = 42/350 (12%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++ + +  LC+  ++ +A ++   M+     PD   YS+ + G  K    ++A ++   +
Sbjct: 200 TYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 259

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            A+     +++Y+ +V GLC+  +I EAV+    M +        +++ ++ G   M KV
Sbjct: 260 VARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKV 319

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +KA  +         +  T +YT  +  L  + R ++   V   M+ +GC  D+  Y I+
Sbjct: 320 EKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGII 379

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL--------HLVSSGI 640
           I +  ++  +        +M KA + P+R     ++ G    S+L         ++  GI
Sbjct: 380 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 439

Query: 641 ---------------------------NKLVSDSEVLDSSM--YNILINGLWKEGLTSQA 671
                                       ++    E L+ S+  Y+++I+GL K G+  +A
Sbjct: 440 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERA 499

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA-----FDSSSFPD 716
             LL  M+  G +PD  T+  L+ +  G    SR          +  FPD
Sbjct: 500 FDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD 549


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 23/474 (4%)

Query: 236 NSRTFE-----IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            SR+FE     I ++ L+ N  +++ +  L  M   G   ++   T +I   CR  K  +
Sbjct: 101 GSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRK 160

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A R+ +++     +PD +TY  LI   C++  +D A  +LE M V    P    +  I+R
Sbjct: 161 ATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILR 217

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-A 405
            LC+ GK  E++  L+ +      P    +  L+E  CN      A  +L++M  +    
Sbjct: 218 SLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKP 277

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++N+ I  +C+   + +A + L  M +    P+  T++  +   C    + DA R+ 
Sbjct: 278 DVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLL 337

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
             +  +      ++++ L+  LC+   +  A++V   M K+GC  +S S+N L++G C  
Sbjct: 338 ADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQE 397

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           +K+D+AI    +  S G      TY  ++  L K  +A   + +L Q+  +GC+  +  Y
Sbjct: 398 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITY 457

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA-DGSQLHLVSSGINKLV 644
             +I  +++  K +  A     M + GL PD  T  +LL GL  +G     V   I K+ 
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK----VDEAI-KIF 512

Query: 645 SDSEVL----DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            D E L     +  YN ++ GL K   TS+A   L  M+ KG  P   T+ +L+
Sbjct: 513 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 223/491 (45%), Gaps = 36/491 (7%)

Query: 105 KLGLAGNVEEMEGLCQNMVKE-RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
           KL   G +EE     + M+ +   P+V  A  SL+  F    +   A R++  + + G  
Sbjct: 116 KLVRNGELEEGLKFLERMIYQGDIPDVI-ACTSLIRGFCRSGKTRKATRIMEILENSGAV 174

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
             V  +NV++G     K G  D      E  +  + P+V T N +L  L ++ +++ A++
Sbjct: 175 PDVITYNVLIGGYC--KSGEIDKALQVLE--RMSVAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              R  ++ C P+  T+ I+I+    +S V  ++ +L EM   G + ++  Y  +I  +C
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +E +L+EAI+    M      P+ +T+  ++  +C   R  DA  +L DM+  G +P+  
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
            F  ++  LC       +++ LE    +   P N+L                        
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMP-NSL------------------------ 385

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
                S+N  +   C+ +++ +A E L  MV     PD  TY+  +   CK    + A+ 
Sbjct: 386 -----SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVE 440

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  Q+S++      I+Y+ +++GL +V K   A E+   M + G      +++ L+ GL 
Sbjct: 441 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLG 500

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              KVD+AI++           +  TY  IMLGL K Q+    +  LA M+ +GC     
Sbjct: 501 CEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKA 560

Query: 584 AYCILIQSMSE 594
            Y ILI+ +++
Sbjct: 561 TYTILIEGIAD 571



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 181/415 (43%), Gaps = 45/415 (10%)

Query: 81  KIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVEE-MEGLCQNMVKERYPNVREALISL 137
           +I K + + +R     D  TY  ++  L  +G ++E ME L + M +E YP+V    I L
Sbjct: 192 EIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTI-L 250

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           + +  N   V  AM++L                                     EM K G
Sbjct: 251 IEATCNDSGVGQAMKLL------------------------------------DEMRKKG 274

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
             P+V T N L+  + +  R++ A+     M   GC PN  T  I+++ + +  R  D+ 
Sbjct: 275 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAE 334

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +L +M   G    +  +  +I  LCR+  L  AI + + M     MP+ L+Y  L++  
Sbjct: 335 RLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGF 394

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVT 373
           C+  ++D A + LE M+  G  P    +  ++  LC+ GK D +V  L       C  V 
Sbjct: 395 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVL 454

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N +++     GK   A  +LE+M  + +  D  +++  +R L    ++ +A ++   
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD 514

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           M   S+ P   TY+A +LG CK      A+     +  +       +Y+ L+EG+
Sbjct: 515 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 40/254 (15%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E+ L+   ++  Q  + D I+ + L+ G C+  K  +A  +   +  +G      ++N+L
Sbjct: 124 EEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVL 183

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C   ++DKA+++         +    TY  I+  L    + K+ + VL + +   C
Sbjct: 184 IGGYCKSGEIDKALQVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQREC 240

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y ILI++    + +       + M K G  PD  T                   
Sbjct: 241 YPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT------------------- 281

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-- 696
                           YN+LING+ KEG   +A   L+ M   G  P+  TH +++ S  
Sbjct: 282 ----------------YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC 325

Query: 697 SVGEEIDSRRFAFD 710
           S G  +D+ R   D
Sbjct: 326 STGRWMDAERLLAD 339


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 155/678 (22%), Positives = 282/678 (41%), Gaps = 34/678 (5%)

Query: 44  SHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMI 103
            H+T  +   ++  R  L+   ++ VL    +    +K F W   Q  + HT   Y  ++
Sbjct: 113 GHKTQKF---LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALL 169

Query: 104 LKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
             LG  GN    E   + +  E    + + L  L+     +   N A+  L  +   G+K
Sbjct: 170 EVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYK 229

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            S   +N ++   +E  R    ++ V++EM  +G   +  TL   + +L +  R   AL 
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYL-VHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALA 288

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              +   K    ++  +  +I GL   S  ++++  L  M        +  Y  ++    
Sbjct: 289 LIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           R+ +L    R+  MM      P    +  LI+  C +     A  +L+ M   G  P   
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 344 VFVDIVRGLCEVGKFD--ESVNFLEDKCGYVTSPH--------NALLECCCNAGKFFLAK 393
           V+  ++ G+C   K    + +   E   G +   H        + L  C C AGKF  A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I+ +M  +  I D  +++  I  LC   ++  A+ L   M  + VVPD  TY+  +   
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK+   + A + F ++       + ++Y+ L+    +  K++ A E+F  M   GC  + 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI----------------MLG 556
            ++  LI G C   +++KA ++ +    +        Y KI                + G
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  + K+   +L  M VEGC  +   Y  LI    +  KL +  + F  M + G  P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  SL+  L    +L L    +++++ +S   +  +Y  +I+GL K G T +A  L+ 
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 677 LMLGKGWVPDATTHGLLV 694
           +M  KG  P+  T+  ++
Sbjct: 766 MMEEKGCHPNVVTYTAMI 783



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 245/548 (44%), Gaps = 28/548 (5%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-EEKRGFAD 185
           YP+ R    SL+ ++      + A ++L  M   G +    V+N+++G I   EK    D
Sbjct: 366 YPS-RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424

Query: 186 FVFV----YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            + +    Y EM+ A +V N   ++ L   L    + E A    R M  KG  P++ T+ 
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            VI  L   S+VD++  +  EM    +  ++  YT +I   C+   L++A + F  M   
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+ +TY  LI+   +  ++  AN++ E M+  G  P    +  ++ G C+ G+ +++
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCE 419
                   G    P         +   +F       K+ D  I D +  ++   +  LC+
Sbjct: 605 CQIYARMRGNADIP---------DVDMYF-------KIDDGNIRDPNIFTYGALVDGLCK 648

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++++A +LL  M V    P+   Y A + G CK+   ++A  VF ++S +    +  +
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L++ L + +++  A++V   M +N C+ +   +  +I GLC + K D+A RL S+  
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G      TYT ++ G  K  +    L ++ QM  +GCA +   Y +LI        L 
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVSDSEVLDSSMYNIL 658
           D     + M +            ++ G    ++  ++S G ++++  +  V     Y IL
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGF---NREFIISLGLLDEIAENVAVPIIPAYRIL 885

Query: 659 INGLWKEG 666
           I+   K G
Sbjct: 886 IDSFCKAG 893



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 125/532 (23%), Positives = 225/532 (42%), Gaps = 39/532 (7%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +L R L        A  I + + + K F     TY K+I  L  A  V+    L + M  
Sbjct: 450 NLARCLCGAGKFEKAYSIIREM-MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS 508

Query: 125 ERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A +    M   G   +V  +  ++ A ++ ++  
Sbjct: 509 NHVVPDVFTYTI-LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK-M 566

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP-------- 235
           +    +++ M+  G +PNV T   L++   ++ +IE A   + RM      P        
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 236 --------NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
                   N  T+  ++ GL    +V ++  +L  M   G +     Y  +I   C+  K
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA  +F  M      P+  TY  LI+ L ++ RLD A  +L  M+     P   ++ +
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC+VGK DE+   +    E  C      + A+++    AGK  + KC LE M    
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK--VDKC-LELMRQMG 803

Query: 404 IADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
              C     ++ + I   C    +  A++LL  M  +      A Y   + G  +   + 
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFI 861

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS----F 515
            +L +  +++    V    +Y  L++  C+  ++  A+E+   MS   C+  S++    +
Sbjct: 862 ISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS--CTSYSAADKDLY 919

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           + LI  L +  KVDKA  L +     G     S +  ++ GL+++ R ++ L
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 11/343 (3%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN+ T   L++ L + ++++ A D    M  +GC PN   ++ +I G     ++D++  +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             +M + G    +  Y+ +I  L ++ +L+ A+++   M      P+ + Y E+I+ LC+
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             + D+A  ++  M   G  P    +  ++ G  + GK D+ +  +        +P    
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE--NEEIRKAYELLGRM 433
           +  L+  CC AG    A  +L++M   K           R + E  N E   +  LL  +
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEM---KQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI 870

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA--QSLVLDSISYSKLVEGLCQVE 491
             +  VP    Y   +   CK    E AL + +++S+       D   YS L+E L    
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           K+ +A E++  M K G     S F  L+ GL  + + ++A++L
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 44/322 (13%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+ +M + G  PNV T + L++ LF+  R++ AL    RM +  C PN   +  +I GL 
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              + D++  ++  M + G    +  YT +I    +  K+++ + L + M A    P+ +
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LIN  C    LDDA+ +L++M           +  ++ G     +F  S+  L++ 
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEI 870

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMAD---RKIADCDSWNIPIRWLCENE 421
              V  P    +  L++  C AG+  LA  + ++M+       AD D ++  I  L    
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ KA+EL   M+    +P+ + +                                    
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFY---------------------------------- 956

Query: 482 KLVEGLCQVEKITEAVEVFCCM 503
            LV+GL ++ +  EA+++  C+
Sbjct: 957 -LVKGLIRINRWEEALQLSDCI 977



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 10/327 (3%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+  CC  G + +A   L ++ D        ++N  +R   E + +  AY +   M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S    D  T   FV   CK   + +AL +   +  +   LD++ Y++++ GLC+     E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A++    M  + C  +  ++ IL+ G    R++ +  R+ S+  + G   +   +  ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF------FNVMV 609
              +         +L +M   GC      Y ILI  +    KL    +       +  M+
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            A +V ++  + +L   L    +     S I +++S   + D+S Y+ +I  L       
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS 696
            A  L + M     VPD  T+ +L+ S
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDS 524



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 47/313 (15%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLV 155
           D +CK+       G ++E + +   M +  Y PNV     SL+       R++ A++VL 
Sbjct: 679 DGFCKV-------GKLDEAQMVFTKMSERGYGPNVY-TYSSLIDRLFKDKRLDLALKVLS 730

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFE 214
            M       +V ++  ++  +   K G  D  +    M++  G  PNV T   +++   +
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLC--KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----------- 263
             +++  L+  R+M  KGC PN  T+ ++I    A   +DD+  +L EM           
Sbjct: 789 AGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAG 848

Query: 264 -------------FDLGIQLELS---------FYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                          LG+  E++          Y  +I   C+  +LE A+ L K M + 
Sbjct: 849 YRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSC 908

Query: 302 DLM--PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                 D+  Y  LI  L    ++D A ++  DMI  G  P   +F  +V+GL  + +++
Sbjct: 909 TSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWE 968

Query: 360 ESVNFLEDKCGYV 372
           E++   +  C  V
Sbjct: 969 EALQLSDCICQMV 981



 Score = 42.4 bits (98), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 72/338 (21%), Positives = 116/338 (34%), Gaps = 84/338 (24%)

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS------WNIPIRWLCENEEI 423
           G+    ++ALLE     G   + +  L     R+I D D        N+ IR  C N   
Sbjct: 159 GHTGPVYHALLEVLGCGGNDRVPEQFL-----REIRDEDKEILGKLLNVLIRKCCRNGLW 213

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A E LGR+      P   TY+A V    +    + A  V R++S     +D  +    
Sbjct: 214 NVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCF 273

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           V  LC+  +  EA+ +          +    F           K+D  I           
Sbjct: 274 VHLLCKAGRWREALAL----------IEKEEF-----------KLDTVI----------- 301

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                 YT+++ GL +    ++ +  L++M    C  +V  Y IL+     + +L  C  
Sbjct: 302 ------YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             ++M+  G  P R                                    ++N LI+   
Sbjct: 356 ILSMMITEGCYPSRR-----------------------------------IFNSLIHAYC 380

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           + G  S A  LL  M   G  P    + +L+G   G E
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 155/678 (22%), Positives = 280/678 (41%), Gaps = 34/678 (5%)

Query: 44  SHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMI 103
            H+T  +   ++  R  L+   ++ VL    +    +K F W   Q  + HT   Y  ++
Sbjct: 113 GHKTQKF---LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALL 169

Query: 104 LKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
             LG  GN    E   + +  E    + + L  L+     +   N A+  L  +   G+K
Sbjct: 170 EVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYK 229

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            S   +N ++   +E  R       V++EM  +G   +  TL   + +L +  R   AL 
Sbjct: 230 PSRLTYNALVRVFLEADR-LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALA 288

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              +   K    ++  +  +I GL   S  ++++  L  M        +  Y  ++    
Sbjct: 289 LIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           R+ +L    R+  MM      P    +  LI+  C +     A  +L+ M   G  P   
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 344 VFVDIVRGLCEVGKFD--ESVNFLEDKCGYVTSPH--------NALLECCCNAGKFFLAK 393
           V+  ++ G+C   K    + +   E   G +   H        + L  C C AGKF  A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I+ +M  +  I D  +++  I  LC   ++  A+ L   M  + VVPD  TY+  +   
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK+   + A + F ++       + ++Y+ L+    +  K++ A E+F  M   GC  + 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI----------------MLG 556
            ++  LI G C   +++KA ++ +    +        Y KI                + G
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  + K+   +L  M VEGC  +   Y  LI    +  KL +  + F  M + G  P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  SL+  L    +L L    +++++ +S   +  +Y  +I+GL K G T +A  L+ 
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 677 LMLGKGWVPDATTHGLLV 694
           +M  KG  P+  T+  ++
Sbjct: 766 MMEEKGCHPNVVTYTAMI 783



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 245/548 (44%), Gaps = 28/548 (5%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-EEKRGFAD 185
           YP+ R    SL+ ++      + A ++L  M   G +    V+N+++G I   EK    D
Sbjct: 366 YPS-RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424

Query: 186 FVFV----YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            + +    Y EM+ A +V N   ++ L   L    + E A    R M  KG  P++ T+ 
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            VI  L   S+VD++  +  EM    +  ++  YT +I   C+   L++A + F  M   
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+ +TY  LI+   +  ++  AN++ E M+  G  P    +  ++ G C+ G+ +++
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCE 419
                   G    P         +   +F       K+ D  I D +  ++   +  LC+
Sbjct: 605 CQIYARMRGNADIP---------DVDMYF-------KIDDGNIRDPNIFTYGALVDGLCK 648

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++++A +LL  M V    P+   Y A + G CK+   ++A  VF ++S +    +  +
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L++ L + +++  A++V   M +N C+ +   +  +I GLC + K D+A RL S+  
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G      TYT ++ G  K  +    L ++ QM  +GCA +   Y +LI        L 
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVSDSEVLDSSMYNIL 658
           D     + M +            ++ G    ++  ++S G ++++  +  V     Y IL
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGF---NREFIISLGLLDEIAENVAVPIIPAYRIL 885

Query: 659 INGLWKEG 666
           I+   K G
Sbjct: 886 IDSFCKAG 893



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 232/544 (42%), Gaps = 42/544 (7%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +L R L        A  I + + + K F     TY K+I  L  A  V+    L + M  
Sbjct: 450 NLARCLCGAGKFEKAYSIIREM-MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS 508

Query: 125 ERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A +    M   G   +V  +  ++ A ++ ++  
Sbjct: 509 NHVVPDVFTYTI-LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK-M 566

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP-------- 235
           +    +++ M+  G +PNV T   L++   ++ +IE A   + RM      P        
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 236 --------NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
                   N  T+  ++ GL    +V ++  +L  M   G +     Y  +I   C+  K
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA  +F  M      P+  TY  LI+ L ++ RLD A  +L  M+     P   ++ +
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC+VGK DE+   +    E  C      + A+++    AGK  + KC LE M    
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK--VDKC-LELMRQMG 803

Query: 404 IADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
              C     ++ + I   C    +  A++LL  M  +      A Y   + G  +   + 
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFI 861

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS----F 515
            +L +  +++    V    +Y  L++  C+  ++  A+E+   MS   C+  S++    +
Sbjct: 862 ISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS--CTSYSAADKDLY 919

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV---LAQ 572
           + LI  L +  KVDKA  L +     G     S +  ++ GL+++ R ++ L +   + Q
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQ 979

Query: 573 MLVE 576
           M+V+
Sbjct: 980 MMVD 983



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 10/327 (3%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+  CC  G + +A   L ++ D        ++N  +R   E + +  AY +   M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S    D  T   FV   CK   + +AL +   +  +   LD++ Y++++ GLC+     E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A++    M  + C  +  ++ IL+ G    R++ +  R+ S+  + G   +   +  ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF------FNVMV 609
              +         +L +M   GC      Y ILI  +    KL    +       +  M+
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            A +V ++  + +L   L    +     S I +++S   + D+S Y+ +I  L       
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS 696
            A  L + M     VPD  T+ +L+ S
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDS 524



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 72/338 (21%), Positives = 116/338 (34%), Gaps = 84/338 (24%)

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS------WNIPIRWLCENEEI 423
           G+    ++ALLE     G   + +  L     R+I D D        N+ IR  C N   
Sbjct: 159 GHTGPVYHALLEVLGCGGNDRVPEQFL-----REIRDEDKEILGKLLNVLIRKCCRNGLW 213

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A E LGR+      P   TY+A V    +    + A  V R++S     +D  +    
Sbjct: 214 NVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCF 273

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           V  LC+  +  EA+ +          +    F           K+D  I           
Sbjct: 274 VHLLCKAGRWREALAL----------IEKEEF-----------KLDTVI----------- 301

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                 YT+++ GL +    ++ +  L++M    C  +V  Y IL+     + +L  C  
Sbjct: 302 ------YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             ++M+  G  P R                                    ++N LI+   
Sbjct: 356 ILSMMITEGCYPSRR-----------------------------------IFNSLIHAYC 380

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           + G  S A  LL  M   G  P    + +L+G   G E
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 225/487 (46%), Gaps = 39/487 (8%)

Query: 165 SVDVFNVVLGAIVEEKRGFA---DFVFV---YKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           +V  FN++L       RGFA   DF  V    +EM   GI  N  T   +L  L     +
Sbjct: 28  NVSSFNILL-------RGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDL 80

Query: 219 ESALDQFRRMHKKGC-------CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           + A+  F    ++ C        P+S T+  ++ GL      D  +    +M     +  
Sbjct: 81  DKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPT 140

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           L  YT ++  LC+ +K+E A  +F+ M      PD + Y  LI+ L +  R+D+A  +++
Sbjct: 141 LLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVD 200

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAG 387
            MI  G  PT   +  IV GLC+ G+  E+V  +++    +       ++ ++      G
Sbjct: 201 LMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMG 260

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWL---CENEEIRKAYELLGRMVVSSVVPDCA 443
           K   A  ++E+MADR  A D  S+ + I  L      EE  K +E    MV     PD  
Sbjct: 261 KVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET---MVEKGCKPDMH 317

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY   +   CK  +   A  V R +   ++  +   Y+ +++G  +  ++ EA+E++  +
Sbjct: 318 TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI 377

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS--TYTKIMLGLVKL- 560
            K+G   S+ ++N +I  LC ++K+D+A+ L             S  TY+ I+ GL K+ 
Sbjct: 378 LKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVG 437

Query: 561 --QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
             +RA DL   LA+M+  G   D   Y  LIQ+++   K+         M+KAG+ PD  
Sbjct: 438 MEERAFDL---LAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 494

Query: 619 TMLSLLH 625
           T  +L+ 
Sbjct: 495 TYGTLVQ 501



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 216/507 (42%), Gaps = 25/507 (4%)

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N LL  L    ++  AL  F+    +   PN  +F I+++G  A    +   ++L EM  
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 266 LGIQLELSFYTCIIPMLCRENKL-----------EEAIRLFKMMRALDLMPDELTYEELI 314
            GI    + +  I+  LC    L           EEA RLF+ + A    PD +TY  ++
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEA----PDSVTYTAIV 113

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           + L +    D   +  E M+     PT   +  +V GLC+  K + + +  E+       
Sbjct: 114 DGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHK 173

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYEL 429
           P    +++L++    AG+   A+ +++ M  R       ++   +  LC+   I++A + 
Sbjct: 174 PDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKT 233

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           +  M    + P   TYS  V G   +   E+A  V  +++ +    D+ISY+  +E L  
Sbjct: 234 IQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYS 293

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           + +  EA +VF  M + GC     ++ I+I   C    +  A  +  L   +        
Sbjct: 294 IGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYI 353

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           YT IM G VK  R ++ L +  ++L +G       Y  +I ++ +  K+ +       M 
Sbjct: 354 YTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQ 413

Query: 610 --KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
             K  L P   T   ++HGL            + +++ +  + D   Y  LI  L   G 
Sbjct: 414 RRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGK 473

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
            S+A  LL+ ML  G  PD  T+G LV
Sbjct: 474 VSRAMELLEEMLKAGIFPDDHTYGTLV 500



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/414 (18%), Positives = 183/414 (44%), Gaps = 42/414 (10%)

Query: 115 MEGLCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGGF 162
           ++GLC+    ER  +V E +I            SL+       RV+ A +++  M + G 
Sbjct: 148 VDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGP 207

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
             +   +  ++  + +  R   + V   +EM +  + P VDT ++++       ++E A 
Sbjct: 208 PPTAVAYTSIVAGLCKCGR-IQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAF 266

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
                M  + C P++ ++ + I+ L +  R +++  +   M + G + ++  Y  II   
Sbjct: 267 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 326

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C+E  +  A  + ++M    + P+   Y  +++   ++ RL++A ++ + ++  G+ P+ 
Sbjct: 327 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 386

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
             +  ++  LC++ K DE++  L +                            +++  + 
Sbjct: 387 VTYNTVINALCKLKKMDEALELLRE----------------------------MQRRKEE 418

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
                 ++++ I  L +     +A++LL  M+ + V+PDC TY++ +           A+
Sbjct: 419 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAM 478

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
            +  ++    +  D  +Y  LV+ LC+ + +  A ++   M +NG + +  +F 
Sbjct: 479 ELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFK 531



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 6/251 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y   I  L   G  EE E + + MV++   P++    I ++ +F     +  A  VL  
Sbjct: 283 SYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI-IIDNFCKEGSMAAATHVLRL 341

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M+    K +  ++ +++   V+  R   + + +Y+ ++K GI+P+  T N ++  L +  
Sbjct: 342 MDKAAVKPNRYIYTMIMDGFVKSSR-LEEALELYQRILKDGILPSTVTYNTVINALCKLK 400

Query: 217 RIESALDQFRRMH--KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           +++ AL+  R M   K+   P+  T+ ++I GL      + +  +L EM D G+  +   
Sbjct: 401 KMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFT 460

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT +I  L    K+  A+ L + M    + PD+ TY  L+  LC +  +D A D+L++M+
Sbjct: 461 YTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMM 519

Query: 335 VIGLTPTDDVF 345
             G TP +  F
Sbjct: 520 RNGHTPNEFTF 530


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 155/678 (22%), Positives = 282/678 (41%), Gaps = 34/678 (5%)

Query: 44  SHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMI 103
            H+T  +   ++  R  L+   ++ VL    +    +K F W   Q  + HT   Y  ++
Sbjct: 113 GHKTQKF---LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALL 169

Query: 104 LKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
             LG  GN    E   + +  E    + + L  L+     +   N A+  L  +   G+K
Sbjct: 170 EVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYK 229

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            S   +N ++   +E  R    ++ V++EM  +G   +  TL   + +L +  R   AL 
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYL-VHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALA 288

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              +   K    ++  +  +I GL   S  ++++  L  M        +  Y  ++    
Sbjct: 289 LIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           R+ +L    R+  MM      P    +  LI+  C +     A  +L+ M   G  P   
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405

Query: 344 VFVDIVRGLCEVGKFD--ESVNFLEDKCGYVTSPH--------NALLECCCNAGKFFLAK 393
           V+  ++ G+C   K    + +   E   G +   H        + L  C C AGKF  A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I+ +M  +  I D  +++  I  LC   ++  A+ L   M  + VVPD  TY+  +   
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK+   + A + F ++       + ++Y+ L+    +  K++ A E+F  M   GC  + 
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI----------------MLG 556
            ++  LI G C   +++KA ++ +    +        Y KI                + G
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  + K+   +L  M VEGC  +   Y  LI    +  KL +  + F  M + G  P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  SL+  L    +L L    +++++ +S   +  +Y  +I+GL K G T +A  L+ 
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 677 LMLGKGWVPDATTHGLLV 694
           +M  KG  P+  T+  ++
Sbjct: 766 MMEEKGCHPNVVTYTAMI 783



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 245/548 (44%), Gaps = 28/548 (5%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV-EEKRGFAD 185
           YP+ R    SL+ ++      + A ++L  M   G +    V+N+++G I   EK    D
Sbjct: 366 YPS-RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424

Query: 186 FVFV----YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            + +    Y EM+ A +V N   ++ L   L    + E A    R M  KG  P++ T+ 
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            VI  L   S+VD++  +  EM    +  ++  YT +I   C+   L++A + F  M   
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+ +TY  LI+   +  ++  AN++ E M+  G  P    +  ++ G C+ G+ +++
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCE 419
                   G    P         +   +F       K+ D  I D +  ++   +  LC+
Sbjct: 605 CQIYARMRGNADIP---------DVDMYF-------KIDDGNIRDPNIFTYGALVDGLCK 648

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++++A +LL  M V    P+   Y A + G CK+   ++A  VF ++S +    +  +
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L++ L + +++  A++V   M +N C+ +   +  +I GLC + K D+A RL S+  
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G      TYT ++ G  K  +    L ++ QM  +GCA +   Y +LI        L 
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVSDSEVLDSSMYNIL 658
           D     + M +            ++ G    ++  ++S G ++++  +  V     Y IL
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGF---NREFIISLGLLDEIAENVAVPIIPAYRIL 885

Query: 659 INGLWKEG 666
           I+   K G
Sbjct: 886 IDSFCKAG 893



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 222/527 (42%), Gaps = 39/527 (7%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +L R L        A  I + + + K F     TY K+I  L  A  V+    L + M  
Sbjct: 450 NLARCLCGAGKFEKAYSIIREM-MSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS 508

Query: 125 ERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A +    M   G   +V  +  ++ A ++ ++  
Sbjct: 509 NHVVPDVFTYTI-LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK-M 566

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP-------- 235
           +    +++ M+  G +PNV T   L++   ++ +IE A   + RM      P        
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 236 --------NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
                   N  T+  ++ GL    +V ++  +L  M   G +     Y  +I   C+  K
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA  +F  M      P+  TY  LI+ L ++ RLD A  +L  M+     P   ++ +
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC+VGK DE+   +    E  C      + A+++    AGK  + KC LE M    
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK--VDKC-LELMRQMG 803

Query: 404 IADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
              C     ++ + I   C    +  A++LL  M  +      A Y   + G  +   + 
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFI 861

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS----F 515
            +L +  +++    V    +Y  L++  C+  ++  A+E+   MS   C+  S++    +
Sbjct: 862 ISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSS--CTSYSAADKDLY 919

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           + LI  L +  KVDKA  L +     G     S +  ++ GL+++ R
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 156/355 (43%), Gaps = 21/355 (5%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN+ T   L++ L + ++++ A D    M  +GC PN   ++ +I G     ++D++  +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             +M + G    +  Y+ +I  L ++ +L+ A+++   M      P+ + Y E+I+ LC+
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             + D+A  ++  M   G  P    +  ++ G  + GK D+ +  +        +P    
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE--NEEIRKAYELLGRM 433
           +  L+  CC AG    A  +L++M   K           R + E  N E   +  LL  +
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEM---KQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI 870

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA--QSLVLDSISYSKLVEGLCQVE 491
             +  VP    Y   +   CK    E AL + + +S+       D   YS L+E L    
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSY 545
           K+ +A E++  M K G     S F  L+ GL         IR+ R+L  ++  SY
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKGL---------IRINRTLCXTTWASY 976



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 10/327 (3%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+  CC  G + +A   L ++ D        ++N  +R   E + +  AY +   M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S    D  T   FV   CK   + +AL +   +  +   LD++ Y++++ GLC+     E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A++    M  + C  +  ++ IL+ G    R++ +  R+ S+  + G   +   +  ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF------FNVMV 609
              +         +L +M   GC      Y ILI  +    KL    +       +  M+
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            A +V ++  + +L   L    +     S I +++S   + D+S Y+ +I  L       
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS 696
            A  L + M     VPD  T+ +L+ S
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDS 524



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 72/338 (21%), Positives = 116/338 (34%), Gaps = 84/338 (24%)

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS------WNIPIRWLCENEEI 423
           G+    ++ALLE     G   + +  L     R+I D D        N+ IR  C N   
Sbjct: 159 GHTGPVYHALLEVLGCGGNDRVPEQFL-----REIRDEDKEILGKLLNVLIRKCCRNGLW 213

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A E LGR+      P   TY+A V    +    + A  V R++S     +D  +    
Sbjct: 214 NVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCF 273

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           V  LC+  +  EA+ +          +    F           K+D  I           
Sbjct: 274 VHLLCKAGRWREALAL----------IEKEEF-----------KLDTVI----------- 301

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                 YT+++ GL +    ++ +  L++M    C  +V  Y IL+     + +L  C  
Sbjct: 302 ------YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             ++M+  G  P R                                    ++N LI+   
Sbjct: 356 ILSMMITEGCYPSRR-----------------------------------IFNSLIHAYC 380

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           + G  S A  LL  M   G  P    + +L+G   G E
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 227/482 (47%), Gaps = 45/482 (9%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT ++  LC E +  +A+ L + M+A  + PD +TY  LI  LC+   +D A ++L +M 
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC 175

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G+ P   V+  +++G C+ G+++      E+  G    P    +  L++  C  GK  
Sbjct: 176 ESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVK 235

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +++KM +R +  +  ++N+ I  +C+   +++A  L   M+   V  D  TY+  +
Sbjct: 236 KATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295

Query: 450 LGKCKLCNYEDALRVFRQ-VSAQSLV-LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            G   +   ++A+ +  + +  +++V  + ++++ ++ GLC+  ++ +A +V   M++NG
Sbjct: 296 TGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL---QRAK 564
           C+ +  +FN+LI GL  + KV KA+ L     SSG    + TY+ ++ G  K+    RA+
Sbjct: 356 CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415

Query: 565 DLL----------------VVLAQMLVEG---------------CALDVEAYCILIQSMS 593
            LL                 +LA +  +G               C LDV AY  +I    
Sbjct: 416 SLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGAC 475

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
                K    F   M+  GL+PD  T   L++  A+   L      + ++ +   V D +
Sbjct: 476 RLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVA 535

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPD----ATTHGLLVGSSVGEEIDSRRFAF 709
           +++ LI G   +G T +   L+  M  K    D    +T +  LV ++ G+ +      F
Sbjct: 536 VFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGF 595

Query: 710 DS 711
           D+
Sbjct: 596 DT 597



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/498 (23%), Positives = 214/498 (42%), Gaps = 46/498 (9%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +  ++ A+  E+R     V + ++M  +G+ P+V T   L+  L +   ++ A++  R M
Sbjct: 116 YTTLMRALCAERR-TGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM 174

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G  PN   +  +++G     R +    +  EM   GI+ ++  YT +I  LCRE K+
Sbjct: 175 CESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKV 234

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++A ++   M    L P+ +TY  LIN +C+   + +A  +  +M+  G+      +  +
Sbjct: 235 KKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL 294

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVT--SPH----NALLECCCNAGKFFLAKCILEKMADR 402
           + GL  V + DE++  LE+     T   P+    N+++   C  G+   A  + + MA+ 
Sbjct: 295 ITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAEN 354

Query: 403 KIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             A C+  ++N+ I  L    +++KA EL+  M  S + PD  TYS  + G CK+   + 
Sbjct: 355 GCA-CNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDR 413

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +  ++    +  + + Y  L+  LC+   + +A   F  M KN C L   +++ +I+
Sbjct: 414 AESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIH 472

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C +R    A                                      L  ML EG   
Sbjct: 473 GACRLRDRKSAEEF-----------------------------------LKHMLDEGLIP 497

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D   Y +LI   +    L         M  +G VPD     SL+ G         V   I
Sbjct: 498 DSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELI 557

Query: 641 NKLVSDSEVLDSSMYNIL 658
            ++ +    LDS + + +
Sbjct: 558 REMTAKDIALDSKIISTI 575



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 176/449 (39%), Gaps = 79/449 (17%)

Query: 279 IPMLCRENKLEEAIRLFKMMRALDL---------MP---DELTYEELINCLCENLRLDDA 326
           + +L R  + E + RL +++R + L         +P   D ++Y  ++  LC      DA
Sbjct: 38  LAVLLRRGRAEASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDA 97

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
              L  ++     PT   +  ++R LC   +  ++V  L D       P           
Sbjct: 98  ALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRP----------- 146

Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
                              D  ++   IR LC+  ++ KA ELL  M  S + P+   YS
Sbjct: 147 -------------------DVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYS 187

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             + G CK   +E   +VF ++S + +  D + Y+ L++ LC+  K+ +A +V   M + 
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT--------------- 551
           G   +  ++N+LI  +C    V +A+ LR+     G +    TY                
Sbjct: 248 GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEA 307

Query: 552 ----------------------KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
                                  ++ GL K  R +    V   M   GCA ++  + +LI
Sbjct: 308 MGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLI 367

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
             +   +K+K      + M  +GL PD  T   L++G     Q+    S ++K+  D   
Sbjct: 368 GGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIE 427

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLM 678
            +   Y  L+  L ++G+  QA    D M
Sbjct: 428 PELVHYIPLLAALCEQGMMEQARNFFDEM 456



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 3/322 (0%)

Query: 376 HNALLECCCNAGKFFLAKC-ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N +L   C  G    A   +L  MA        S+   +R LC      +A  LL  M 
Sbjct: 81  YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQ 140

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            S V PD  TY   + G C   + + A+ + R++    +  + + YS L++G C+  +  
Sbjct: 141 ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWE 200

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
              +VF  MS  G       +  LI  LC   KV KA ++       G      TY  ++
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
             + K    K+ + +   ML +G ALD   Y  LI  +S   ++ +       M+    +
Sbjct: 261 NSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETM 320

Query: 615 --PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             P+  T  S++HGL    ++       + +  +    +   +N+LI GL +     +A 
Sbjct: 321 VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM 380

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            L+D M   G  PD+ T+ +L+
Sbjct: 381 ELMDEMASSGLEPDSFTYSILI 402



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 131/295 (44%), Gaps = 2/295 (0%)

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + D  S+N  +  LC       A   L R++     P   +Y+  +   C       A+ 
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           + R + A  +  D ++Y  L+ GLC    + +AVE+   M ++G   +   ++ L+ G C
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              + +   ++       G       YT ++  L +  + K    V+ +M+  G   +V 
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y +LI SM ++  +K+     N M++ G+  D  T  +L+ GL+   ++      + ++
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 644 VSDSEVLDSSM--YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +    +++ ++  +N +I+GL K G   QA  + D+M   G   +  T  LL+G 
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGG 369



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 9/213 (4%)

Query: 514 SFNILIYGLCVMRK-VDKAI-RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           S+N ++  LC     +D A+  LR +A+   T  T  +YT +M  L   +R    + +L 
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHE--TRPTAVSYTTLMRALCAERRTGQAVGLLR 137

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M   G   DV  Y  LI+ + +   +         M ++G+ P+      LL G     
Sbjct: 138 DMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAG 197

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +   VS    ++       D  MY  LI+ L +EG   +A+ ++D M+ +G  P+  T+ 
Sbjct: 198 RWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYN 257

Query: 692 LLVGS-----SVGEEIDSRRFAFDSSSFPDSVS 719
           +L+ S     SV E +  R    +     D+V+
Sbjct: 258 VLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 223/496 (44%), Gaps = 9/496 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM   G+V +  TLN +L+V      +E A + F  M ++G  P+  +F++++       
Sbjct: 179 EMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMG 238

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           RV ++   L  M + G  ++ +  T II   C++  +   +  F  M  + L P+ + + 
Sbjct: 239 RVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---LEDK 368
            LIN LC+   +  A ++LE+M+  G  P       ++ GLC+ G  +++      L   
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRS 358

Query: 369 CGYVTSPHN--ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
            GY  + H   A++   C   K   A+ +L +M ++  + + +++   I   C+     +
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVR 418

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AYEL+  M      P+  TY+A + G CK  + ++A R+  +VS   L  D ++Y+ L+ 
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+      ++  F  M K G +    S+  LI   C  +++ ++ RL   A S G   
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIP 538

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TYT ++ G  +       + +  +M   GCA D   Y  LI  + +++KL D    +
Sbjct: 539 TKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLY 598

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + M+  GL P   T L+L +           S+ IN L    +       N L+  L  E
Sbjct: 599 DAMMDKGLSPCEVTRLTLAYEYCKKDD---SSTAINVLDRLEKRQWIRTVNTLVRKLCSE 655

Query: 666 GLTSQASYLLDLMLGK 681
           G    A+     +L K
Sbjct: 656 GKLDMAALFFHKLLDK 671



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 141/623 (22%), Positives = 264/623 (42%), Gaps = 65/623 (10%)

Query: 60  NLSPDHLIRVLDNTNDLSS---ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           +L+ D  I V+ +  D +    AL    W     +F+H    Y  ++    L GN     
Sbjct: 95  SLTHDQAITVVASLADEAGSMVALSFLYWAIGFPKFRHFMRLY--IVSATALIGN----- 147

Query: 117 GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
              +N+  ER     E +  +V +F  + ++  A+ ++V M + G   S    N VL   
Sbjct: 148 ---KNL--ER---ANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVA 199

Query: 177 VEE--------------KRGFADFVFVYK--------------------EMVKAGIVPNV 202
           V                +RG +     +K                     MV+ G + + 
Sbjct: 200 VGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDN 259

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T   +++   +   +   +  F +M + G  PN   F  +I GL     +  +  +L E
Sbjct: 260 ATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEE 319

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENL 321
           M   G +  +  +T +I  LC++   E+A RLF K++R+    P+  TY  +IN  C+  
Sbjct: 320 MVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP---- 375
           +L+ A  +L  M   GL P  + +  ++ G C+VG F  +   ++   K G+  SP    
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF--SPNIYT 437

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +NA+++  C  G    A  +L K++   + AD  ++ I +   C   +  ++     +M+
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                PD  +Y+  +   C+    +++ R+F +  +  L+    +Y+ ++ G C+    +
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            AV++F  MS +GC+  S ++  LI GLC   K+D A  L       G S    T   + 
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
               K   +   + VL ++        V     L++ +  + KL   ALFF+ ++     
Sbjct: 618 YEYCKKDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAALFFHKLLDKEPN 674

Query: 615 PDRETMLSLLHGLADGSQLHLVS 637
            +R T+L  ++   + ++  LVS
Sbjct: 675 VNRVTLLGFMNKCYESNKYGLVS 697



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/478 (20%), Positives = 192/478 (40%), Gaps = 41/478 (8%)

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           E  +++ A++    M  +G   +++T   V+   +    V+ + ++  EM   G+  +  
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  ++   C   ++ EA +    M     + D  T   +I+  C+   ++        M
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
           + +GL P    F  ++ GLC+ G   ++   LE+       P    H  L++  C  G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 390 FLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             A  +  K+  +D    +  ++   I   C+ +++ +A  LL RM    +VP+  TY+ 
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK+ N+  A  +   +  +    +  +Y+ +++GLC+   + EA  +   +S +G
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                 ++ IL+   C     +++                                   L
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRS-----------------------------------L 490

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           V   +ML  G   D+ +Y  LI     Q ++K+    F   V  GL+P ++T  S++ G 
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                  L      ++ +     DS  Y  LI+GL KE     A  L D M+ KG  P
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 196/474 (41%), Gaps = 34/474 (7%)

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
           + ++     N ++ ++V+++ EM + G+        C++ +      +E A  +F  M  
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + PD ++++ ++   C   R+ +A   L  M+  G    +     I+   C+ G  + 
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277

Query: 361 SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
            V                        G F+       KM +  +A +  ++   I  LC+
Sbjct: 278 VV------------------------GYFW-------KMVEMGLAPNVINFTALINGLCK 306

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF-RQVSAQSLVLDSI 478
              I++A+ELL  MV     P+  T++  + G CK    E A R+F + V +     +  
Sbjct: 307 QGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVH 366

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ ++ G C+ +K+  A  +   M + G   +++++  LI G C +    +A  L  L 
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G S    TY  I+ GL K     +   +L ++ V G   D   Y IL+     Q   
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
               +FFN M+K G  PD  +  +L+       Q+        + VS   +     Y  +
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDS 711
           I G  + G TS A  L   M   G  PD+ T+G L+     E ++D  R  +D+
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 261/573 (45%), Gaps = 46/573 (8%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVL-VNMNSGGFKLSVDV--FNVVLGAIVEEKRGFA 184
           PNV  +  +LV  F N  R   A+ +L V  +  G     DV  +N V+     E  G  
Sbjct: 264 PNV-VSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFRE--GQV 320

Query: 185 DFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           D  + ++ +M+  GI P+V T N +++ L +   ++ A   F++M  KG  P++ T+  +
Sbjct: 321 DKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCL 380

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK---------------- 287
           I G ++  +  + V +L EM    ++ +   Y  ++  LC+  +                
Sbjct: 381 IHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGI 440

Query: 288 -----LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
                ++EA+ +F  MR   L P+ + Y  LI+ LC+  R+DDA      MI        
Sbjct: 441 KPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI-------- 492

Query: 343 DVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
               + V GLC V K++++       L+          N L+   C  G+   A+ ++E 
Sbjct: 493 ----NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIEL 548

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M    +  D  S+N  +   C      +A +LL  MV   + P+  TY+  + G CK   
Sbjct: 549 MLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARR 608

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            +DA  + R++       D ++Y+ ++ GL Q  + +EA E++  M  +       ++NI
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           ++ GLC    VD+A ++     S G      T+  ++  L+K  + +D + + A +   G
Sbjct: 669 ILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYG 728

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              DVE YC++ +++ ++  L++  + F+ M + G  P+   + +L+        +    
Sbjct: 729 LVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAG 788

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           + ++KL   +  L++S  ++LI+ L+  G   Q
Sbjct: 789 AYLSKLDEKNFSLEASTASMLIS-LYSRGEYQQ 820



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 244/567 (43%), Gaps = 51/567 (8%)

Query: 168 VFNVVLGAIVEEKR---GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD- 223
            +++++G      R   GFA    V+  ++K G   N    N LL+ L +  R++ A + 
Sbjct: 197 TYSILIGCFCRMGRLEHGFA----VFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD---LGIQLELSFYTCIIP 280
              RM + GC PN  ++  ++KG    +R ++++ +L  M D   L    ++  Y  +I 
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
              RE ++++A  LF  M    + PD +TY  +I+ LC+   +D A  + + M+  G+ P
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
           ++  +  ++ G    GK+ E V  LE+   +   P    +  LL+  C  G+   A+ I 
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           + +  + I               +  I +A  +  +M    + P+   Y A +   CKL 
Sbjct: 433 DSVIRKGIK-------------PDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLG 479

Query: 457 NYEDALRVFRQV--------------SAQSLV---------LDSISYSKLVEGLCQVEKI 493
             +DA+  F Q+               A+ LV         LD + ++ L+  LC+  ++
Sbjct: 480 RVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRV 539

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            EA  +   M + G      S+N L+ G C+  + D+A +L  +  S G      TY  +
Sbjct: 540 MEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTL 599

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G  K +R  D   +L +ML+ G   DV  Y  ++  + +  +  +    +  M+ +  
Sbjct: 600 LHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRT 659

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
             D  T   +L+GL   + +         L S    L    +NI+I  L K G    A  
Sbjct: 660 QWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMD 719

Query: 674 LLDLMLGKGWVPDATTHGLLVGSSVGE 700
           L   +   G VPD  T+ L+  + + E
Sbjct: 720 LFATISAYGLVPDVETYCLIAENLIKE 746



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 225/519 (43%), Gaps = 34/519 (6%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V + N ++   F   +++ A + F +M  +G  P+  T+  VI GL     VD + ++
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             +M D G++     Y C+I       K +E +RL + M   DL PD   Y  L++ LC+
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCK 421

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVD-----------------------IVRGLCEVG 356
           N R  +A +I + +I  G+ P  D  +D                       ++  LC++G
Sbjct: 422 NGRCTEARNIFDSVIRKGIKP--DAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLG 479

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIR 415
           + D+++         V           C   K+  A+ ++ +M D+ I  D   +N  + 
Sbjct: 480 RVDDAILKFNQMINEVYG--------LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMC 531

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC    + +A  L+  M+   V PD  +Y+  V G C     ++A ++   + +  L  
Sbjct: 532 DLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKP 591

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +  +Y+ L+ G C+  +I +A  +   M  NG +    ++N +++GL    +  +A  L 
Sbjct: 592 NEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELY 651

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               +S T +   TY  I+ GL K     +   +   +  +G  L +  + I+I ++ + 
Sbjct: 652 LNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKG 711

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K +D    F  +   GLVPD ET   +   L     L  +    + +  +    +S M 
Sbjct: 712 GKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRML 771

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N L+      G  S+A   L  +  K +  +A+T  +L+
Sbjct: 772 NALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 188/484 (38%), Gaps = 93/484 (19%)

Query: 284 RENKLEE--AIRLF-KMMRALD--LMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           R + LE    I LF +M+R     + PD  TY  LI C C   RL+    +   ++  G 
Sbjct: 167 RHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGW 226

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL-----EDKCGYVTSPHNALLECCCNAGKFFLAK 393
                VF  +++GLC+  + DE+ N L     E  C      +N L++  CN  +   A 
Sbjct: 227 RVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEAL 286

Query: 394 CILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            +L  MAD +   C     S+N  I       ++ KAY L  +M+   + PD  TY+  +
Sbjct: 287 ELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVI 346

Query: 450 LGKCK-----------------------------------LCNYEDALRVFRQVSAQSLV 474
            G CK                                      +++ +R+  ++S   L 
Sbjct: 347 DGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLE 406

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVF-----------------CC----MSKNGCSLSSS 513
            D   Y+ L++ LC+  + TEA  +F                  C    M + G S +  
Sbjct: 407 PDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVV 466

Query: 514 SFNILIYGLCVMRKVDKAI--------------------RLRSLAYS---SGTSYTTSTY 550
           ++  LI  LC + +VD AI                    +   L +     G       +
Sbjct: 467 NYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVF 526

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             +M  L +  R  +   ++  ML  G   DV +Y  L+       +  + A   +VMV 
Sbjct: 527 NTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            GL P+  T  +LLHG     ++    S + +++ +    D   YN +++GL++ G  S+
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 671 ASYL 674
           A  L
Sbjct: 647 AKEL 650



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 7/266 (2%)

Query: 429 LLGRMV---VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           L  RMV      V PD  TYS  +   C++   E    VF  +      ++ I +++L++
Sbjct: 179 LFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLK 238

Query: 486 GLCQVEKITEAVEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIR-LRSLAYSSGT 543
           GLC  +++ EA  +    M + GC+ +  S+N L+ G C   + ++A+  L  +A   G 
Sbjct: 239 GLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGL 298

Query: 544 SYTTS--TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           S      +Y  ++ G  +  +      +  QM+  G   DV  Y  +I  + +   +   
Sbjct: 299 SCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRA 358

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F  M+  G+ P   T   L+HG     +   V   + ++ +     D  +Y +L++ 
Sbjct: 359 KAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDY 418

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDA 687
           L K G  ++A  + D ++ KG  PDA
Sbjct: 419 LCKNGRCTEARNIFDSVIRKGIKPDA 444


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 145/659 (22%), Positives = 278/659 (42%), Gaps = 59/659 (8%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           ++S     +E ++++L  +L P  +  VL + +D   ALK F W   Q R++H    Y  
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYS 212

Query: 102 MILKLGLAGNVEEMEGLCQN-------MVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           M+        V     LCQ        M +       EA   ++ S+    ++  A++VL
Sbjct: 213 ML-------EVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M   G + ++ + N  +   V   R      F+ +  V  GIVPNV T N ++    +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQV-VGIVPNVVTYNCMIRGYCD 324

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQLELS 273
            +R+E A++    MH KGC P+  ++  ++  L    R+ +   ++ +M  + G+  +  
Sbjct: 325 LHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I ML + +  +EA+   K  +      D+L Y  +++ LC+  R+ +A D++ +M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444

Query: 334 IVIGLTPTDDV-FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           +  G  P D V +  +V G C +G+ D++   L+    +   P    + ALL   C  GK
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
              A+ ++  M++      + W     W                       P+  TYS  
Sbjct: 505 SLEAREMM-NMSE------EHW-----W----------------------SPNSITYSVI 530

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF-CCMSKNG 507
           + G  +     +A  V R++  +      +  + L++ LC+  +  EA +    C++K G
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK-G 589

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C+++  +F  +I+G C   ++D A+ +    Y         TYT ++  L K  R  +  
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            ++ +ML +G       Y  +I    +  K+ D       M+       R     ++  L
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQVIEKL 707

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               +L    + + K++  +   D+     L+ G  K+G+   A  +   M  +  +PD
Sbjct: 708 CVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPD 766



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/446 (21%), Positives = 199/446 (44%), Gaps = 7/446 (1%)

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           S  +L  M   GI      ++ ++    R  +L +A+++  +M+   + P+ L     I+
Sbjct: 226 SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
                 RL+ A   LE M V+G+ P    +  ++RG C++ + +E++  LED       P
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYEL 429
               +  ++   C   +    + +++KMA     + D  ++N  I  L +++   +A   
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEGLC 488
           L          D   YSA V   CK     +A  +  ++ S      D ++Y+ +V G C
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           ++ ++ +A ++   M  +G   ++ S+  L+ G+C   K  +A  + +++     S  + 
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 525

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY+ IM GL +  +  +   V+ +M+++G         +L+QS+    +  +   F    
Sbjct: 526 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 585

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           +  G   +     +++HG     +L    S ++ +   ++  D   Y  L++ L K+G  
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRI 645

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV 694
           ++A+ L+  ML KG  P   T+  ++
Sbjct: 646 AEATELMKKMLHKGIDPTPVTYRTVI 671



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 4/301 (1%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I        + KA   L RM V  +VP+  TY+  + G C L   E+A+ +   + +
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK-NGCSLSSSSFNILIYGLCVMRKVD 529
           +  + D +SY  ++  LC+ ++I E  ++   M+K +G      ++N LI+ L      D
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYCIL 588
           +A+     A   G       Y+ I+  L K  R  +   ++ +ML +G C  DV  Y  +
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           +       ++        VM   G  P+  +  +LL+G+    +       +N       
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRR 706
             +S  Y+++++GL +EG  S+A  ++  M+ KG+ P      LL+ S    G   ++R+
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580

Query: 707 F 707
           F
Sbjct: 581 F 581


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 205/469 (43%), Gaps = 67/469 (14%)

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           RM  KGC P+  T+ +V+ GL      D + ++L +M    ++  +  Y  II  LC+  
Sbjct: 6   RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
            +++A+ LFK M    + P+ +TY  LI+CLC   R  DA+ +L DMI   + P  DVF 
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP--DVFT 123

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-A 405
                                         +AL++     GK   A+ + ++M  R I  
Sbjct: 124 -----------------------------FSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 154

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
              +++  I   C ++ + +A ++   MV     PD  TY+  + G CK    E+ + VF
Sbjct: 155 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           R++S + LV ++++Y+ L++GL Q      A E+F  M  +G   +  ++N L+ GLC  
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            K++KA+ +      S    T  TY  ++ G+ K  + +D   +   + ++G   DV AY
Sbjct: 275 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 334

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             +I     +   ++    F  M + G +P                              
Sbjct: 335 NTMISGFCRKGSKEEADALFKEMKEDGTLP------------------------------ 364

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                +S  YN LI    ++G    ++ L+  M   G+  DA+T GL+ 
Sbjct: 365 -----NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 408



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 182/375 (48%), Gaps = 8/375 (2%)

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           M ++  M + G +  +  + VV+  +   KRG  D  F +  +M +  + P V   N ++
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLC--KRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 58

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           + L +   ++ AL+ F+ M  KG  PN  T+  +I  L    R  D+  +L +M +  I 
Sbjct: 59  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            ++  ++ +I    +E KL EA +L+  M    + P  +TY  LIN  C + RLD+A  +
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCN 385
            E M+     P    +  +++G C+  + +E +    +  + G V  T  +N L++    
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238

Query: 386 AGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           AG   +A+ I ++M +D    +  ++N  +  LC+N ++ KA  +   +  S + P   T
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 298

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK    ED   +F  +S + +  D ++Y+ ++ G C+     EA  +F  M 
Sbjct: 299 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 358

Query: 505 KNGCSLSSSSFNILI 519
           ++G   +S  +N LI
Sbjct: 359 EDGTLPNSGCYNTLI 373



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 206/449 (45%), Gaps = 54/449 (12%)

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L   M A    PD +TY  ++N LC+    D A ++L  M    L P   ++  I+ GLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCD 408
           +    D+++N  ++       P    +++L+ C CN G++  A  +L  M +RKI  D  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           +++  I    +  ++ +A +L   MV  S+ P   TYS+ + G C     ++A ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            ++    D ++Y+ L++G C+ +++ E +EVF  MS+ G   ++ ++NILI GL      
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D A  +     S G      TY  ++ GL K  + +  +VV   +        +  Y I+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 589 IQSMSEQNKLKDC-ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           I+ M +  K++D   LF N+ +K G+ PD                          +V+  
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLK-GVKPD--------------------------VVA-- 333

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE------- 700
                  YN +I+G  ++G   +A  L   M   G +P++  +  L+ + + +       
Sbjct: 334 -------YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 386

Query: 701 ----EIDSRRFAFDSSSFPDSVSDILAEG 725
               E+ S  FA D+S+    V+++L +G
Sbjct: 387 ELIKEMRSCGFAGDASTI-GLVTNMLHDG 414



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 145/325 (44%), Gaps = 5/325 (1%)

Query: 51  EAKIQSLRHNL-SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           E + + +R N+ +   LI  L N    S A ++   + I+++      T+  +I      
Sbjct: 76  EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKE 134

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G + E E L   MVK           SL+  F  H R++ A ++   M S      V  +
Sbjct: 135 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 194

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N ++    + KR   + + V++EM + G+V N  T N L++ LF+    + A + F+ M 
Sbjct: 195 NTLIKGFCKYKR-VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G  PN  T+  ++ GL  N +++ ++ +   +    ++  +  Y  +I  +C+  K+E
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +   LF  +    + PD + Y  +I+  C     ++A+ + ++M   G  P    +  ++
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373

Query: 350 RGLCEVGKFDESVNFLED--KCGYV 372
           R     G  + S   +++   CG+ 
Sbjct: 374 RARLRDGDREASAELIKEMRSCGFA 398



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 135/287 (47%), Gaps = 4/287 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREAL 134
           +  AL +FK +   K  +    TY  +I  L   G   +   L  +M++ +  P+V    
Sbjct: 67  MDDALNLFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF-TF 124

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +L+ +FV   ++  A ++   M       S+  ++ ++       R   +   +++ MV
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR-LDEAKQMFEFMV 183

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
                P+V T N L++   +  R+E  ++ FR M ++G   N+ T+ I+I+GL      D
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +  I  EM   G+   +  Y  ++  LC+  KLE+A+ +F+ ++   + P   TY  +I
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             +C+  +++D  D+  ++ + G+ P    +  ++ G C  G  +E+
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 63/312 (20%), Positives = 120/312 (38%), Gaps = 47/312 (15%)

Query: 57  LRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           +   ++PD      LI        L  A K++  + +++    +  TY  +I    +   
Sbjct: 113 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDR 171

Query: 112 VEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           ++E + + + MV K  +P+V     +L+  F  + RV   M V   M+  G   +   +N
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVV-TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 230

Query: 171 VVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNV--------------------------- 202
           +++  + +   G  D    ++KEMV  G+ PN+                           
Sbjct: 231 ILIQGLFQA--GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 288

Query: 203 --------DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
                    T N ++E + +  ++E   D F  +  KG  P+   +  +I G       +
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++ ++  EM + G       Y  +I    R+   E +  L K MR+     D  T   + 
Sbjct: 349 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 408

Query: 315 NCLCENLRLDDA 326
           N L +  RLD +
Sbjct: 409 NMLHDG-RLDKS 419


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 132/550 (24%), Positives = 255/550 (46%), Gaps = 7/550 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
            M  L +M   G + +V ++NV++G +  EKR   D   ++ EM    +V ++ T N L+
Sbjct: 195 GMEFLDSMRKRGVRPNVFIYNVLIGGLCREKR-IRDAEKMFDEMCNINLVGSIVTYNTLI 253

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +   +   +++A     RM +K   PN  TF  ++ GL    ++ ++ S+L EM   G  
Sbjct: 254 DGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFM 313

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            +   Y+ +   L R +    A+ L++      +  +  T   L+N LC+  +++ A +I
Sbjct: 314 PDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEI 373

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCN 385
           L+     GL   + ++   V G C +G  ++++  +E    +   P+    N+L++  C+
Sbjct: 374 LKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCD 433

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             +   A+  ++KMA++ +    +++N  I    +     + +++L +M    V P+  +
Sbjct: 434 MKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVS 493

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y + +   CK     +A  V R +  + ++ ++  Y+ L++G C V K+ +A+  F  M 
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           ++  S +  ++N+LI GLC   K+ +A    +   SSG S    TY  ++ G        
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
             L +   M   G    V  Y  LI   S++  ++     +N M++  L+PDR    +++
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMI 672

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           H  A+        S    ++      D   YN LI G ++EG  S    L++ M  K   
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732

Query: 685 PDATTHGLLV 694
           P A T+ +LV
Sbjct: 733 PKADTYDILV 742



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/528 (21%), Positives = 229/528 (43%), Gaps = 51/528 (9%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           E  GF    F+Y + ++A +               +   ++  ++    M K+G  PN  
Sbjct: 168 ENSGFRTDTFMYAKAIQAAV---------------KLQNLKMGMEFLDSMRKRGVRPNVF 212

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
            + ++I GL    R+ D+  +  EM ++ +   +  Y  +I   C+  +L+ A ++ + M
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL--CEVG 356
           +   + P+ +T+  L++ LC+  ++ +A  +L++M V G  P    +  +  GL  C+ G
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIR 415
                               N  +E             + E+  ++ I  +  + +I + 
Sbjct: 333 --------------------NGAME-------------LYEQATEKGIRINNYTGSILLN 359

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC+  ++ KA E+L +   + +V D   Y+ FV G C++ +   A+    ++ +  L  
Sbjct: 360 GLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRP 419

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +SI+++ L++  C ++++ +A E    M++ G + S  ++N LI G   +   D+  ++ 
Sbjct: 420 NSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQIL 479

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      +Y  ++  L K  +  +  +VL  M+  G   + + Y +LI      
Sbjct: 480 EQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMV 539

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K+KD   FF+ M+++ + P   T   L+ GL    +L      + ++ S     D   Y
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITY 599

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
           N LI+G    G  S+   L + M   G  P   T+  L+     E I+
Sbjct: 600 NSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIE 647



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/541 (19%), Positives = 216/541 (39%), Gaps = 40/541 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  +     ++ A ++   M       ++  FN +L  + +  R   +   + KEM  
Sbjct: 251 TLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCK-MRKMKEARSLLKEMEV 309

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G +P+  T + L + L   +    A++ + +  +KG   N+ T  I++ GL    +V+ 
Sbjct: 310 NGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEK 369

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  IL +  + G+  +   Y   +   CR   + +AI   + M +  L P+ +T+  LI+
Sbjct: 370 AEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLID 429

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C+   +D A + ++ M   G+TP+ + +  ++ G  ++  FD     LE        P
Sbjct: 430 KFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKP 489

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               + +L+ C C  GK   A+ +L  M  R +  +   +N+ I   C   +++ A    
Sbjct: 490 NVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFF 549

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+ S + P   TY+  + G CK     +A     Q+++     D I+Y+ L+ G    
Sbjct: 550 DEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANA 609

Query: 491 EKITEAVEVFCCMSK--------------NGCSLSSSS--------------------FN 516
             +++ + ++  M                +GCS                         +N
Sbjct: 610 GNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYN 669

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +I+    +    KA  L       G      TY  ++LG  +  +  ++  ++  M  +
Sbjct: 670 AMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAK 729

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
             A   + Y IL++   +        +++  MV+   +P+      L  GL    +L  V
Sbjct: 730 ELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEV 789

Query: 637 S 637
            
Sbjct: 790 Q 790



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 184/397 (46%), Gaps = 8/397 (2%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +   + M   G+ PN  T N L++   +   ++ A +  ++M +KG  P+  T+  +I G
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                  D    IL +M ++G++  +  Y  +I  LC++ K+ EA  + + M    ++P+
Sbjct: 466 YGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPN 525

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
              Y  LI+  C   ++ DA    ++M+   ++PT   +  ++ GLC+ GK  E+ +FL 
Sbjct: 526 AQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLT 585

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCI--LEKMADRKIADCDSWNIPIRWLCEN 420
                  SP    +N+L+    NAG   ++KC+   E M +  I        P+   C  
Sbjct: 586 QITSSGHSPDVITYNSLISGYANAGN--VSKCLGLYETMKNLGIKPTVRTYHPLISGCSK 643

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           E I    +L   M+  +++PD   Y+A +    ++ N + A  + + +  Q +  D ++Y
Sbjct: 644 EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTY 703

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+ G  +  K++   ++   M     +  + +++IL+ G C ++    A         
Sbjct: 704 NSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVE 763

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           +      S   ++  GL +  R +++ V+ ++M V+G
Sbjct: 764 NNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKG 800



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/509 (21%), Positives = 206/509 (40%), Gaps = 89/509 (17%)

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMR--------------------------AL 301
           I L ++    ++ + C+   L EA+ L++ MR                           +
Sbjct: 102 IPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVV 161

Query: 302 DLM---------PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           DL           D   Y + I    +   L    + L+ M   G+ P   ++  ++ GL
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221

Query: 353 CEVGKFDESVNFLEDKC-----GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-D 406
           C   +  ++    ++ C     G + + +N L++  C  G+   A  + E+M ++ +A +
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVT-YNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY--------------------- 445
             ++N  +  LC+  ++++A  LL  M V+  +PD  TY                     
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYE 340

Query: 446 --------------SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
                         S  + G CK    E A  + ++ +   LV D + Y+  V G C++ 
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + +A+     M   G   +S +FN LI   C M+++DKA          G + +  TY 
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  KL        +L QM   G   +V +Y  LI  + +  K+ +  +    M+  
Sbjct: 461 TLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR 520

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM------YNILINGLWKE 665
           G++P+ +    + + L DGS   +V    + L    E++ S +      YN+LI+GL K+
Sbjct: 521 GVLPNAQ----VYNMLIDGS--CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKK 574

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G  ++A   L  +   G  PD  T+  L+
Sbjct: 575 GKLTEAEDFLTQITSSGHSPDVITYNSLI 603



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 6/254 (2%)

Query: 443 ATYS---AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           A YS   + +L K    +  D    F   SA S+ L       L+   C+ + + EAVE+
Sbjct: 72  AAYSLAKSLILTKSTFSSPSDLFSCF---SACSIPLRITLSDMLLSVCCKSKMLREAVEL 128

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           +  M ++G   S  S ++L   L   ++  K + L     +SG    T  Y K +   VK
Sbjct: 129 YEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVK 188

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           LQ  K  +  L  M   G   +V  Y +LI  +  + +++D    F+ M    LV    T
Sbjct: 189 LQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVT 248

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             +L+ G     +L        ++   S   +   +N L++GL K     +A  LL  M 
Sbjct: 249 YNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEME 308

Query: 680 GKGWVPDATTHGLL 693
             G++PD  T+ +L
Sbjct: 309 VNGFMPDGYTYSIL 322


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 245/532 (46%), Gaps = 18/532 (3%)

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF--ETNRIESALDQFRRM-HK 230
            ++ EEK   A+ + V    ++ G  P  D+L Y L V    +T  +  A    R M  K
Sbjct: 242 ASLREEKP--AEALEVLSRAIERGAEP--DSLLYSLAVQACCKTLDLAMANSLLREMKEK 297

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           K C P+  T+  VI   +    +DD++ +  EM   GI + +   T +I   C+ N L  
Sbjct: 298 KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+ LF  M      P+ +T+  LI    +N  ++ A +  + M V+GLTP+      I++
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPH-----NALLECCCNAGKFFLAKCILEKMADRKIA 405
           G  +  K +E++   ++   + T        N +L   C  GK   A  +L KM  R I 
Sbjct: 418 GWLKGQKHEEALKLFDE--SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  S+N  +   C  + +  A  +   ++   + P+  TYS  + G  +  + ++AL V
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM--SKNGCSLSSSSFNILIYGL 522
              +++ ++ ++ + Y  ++ GLC+V + ++A E+   M   K  C +S  S+N +I G 
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIIDGF 594

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               ++D A+        +G S    TYT +M GL K  R    L +  +M  +G  LD+
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            AY  LI    +++ ++  +  F+ +++ GL P +    SL+ G  +   +        K
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++ D    D   Y  LI+GL K+G    AS L   M   G VPD   + ++V
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 129/573 (22%), Positives = 247/573 (43%), Gaps = 39/573 (6%)

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           +E   S++ + V    ++ A+R+   M S G  ++V     ++    +     +  V ++
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV-LF 362

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            +M K G  PN  T + L+E   +   +E AL+ +++M   G  P+      +I+G +  
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + ++++ +  E F+ G+    + + C  I+  LC++ K +EA  L   M +  + P+ +
Sbjct: 423 QKHEEALKLFDESFETGLA---NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           +Y  ++   C    +D A  +  +++  GL P +  +                 + L D 
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY-----------------SILIDG 522

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C       NAL               ++  M    I  +   +   I  LC+  +  KA 
Sbjct: 523 CFRNHDEQNALE--------------VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568

Query: 428 ELLGRMVVSS-VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           ELL  M+    +   C +Y++ + G  K    + A+  + ++    +  + I+Y+ L+ G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+  ++ +A+E+   M   G  L   ++  LI G C    ++ A  L S     G + +
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y  ++ G   L      L +  +ML +G   D+  Y  LI  + +   L   +  + 
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   GLVPD      +++GL+   Q   V     ++  ++   +  +YN +I G ++EG
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
              +A  L D ML KG +PD  T  +LV   VG
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 108/540 (20%), Positives = 211/540 (39%), Gaps = 43/540 (7%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G   N    NYLL    +  + + A+D   +M +    P        +  L+  + + ++
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +   M  +G+  +      ++    RE K  EA+ +          PD L Y   +  
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277

Query: 317 LCENLRLDDANDILEDMIVIGL-TPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGY 371
            C+ L L  AN +L +M    L  P+ + +  ++    + G  D+++      L D    
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
                 +L+   C       A  + +KM  +    +  ++++ I W  +N E+ KA E  
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M V  + P        + G  K   +E+AL++F + S ++ + +    + ++  LC+ 
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQ 456

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD-----------KAIRLRSLAY 539
            K  EA E+   M   G   +  S+N ++ G C  + +D           K ++  +  Y
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516

Query: 540 S----------------SGTSYTTST--------YTKIMLGLVKLQRAKDLLVVLAQMLV 575
           S                   ++ TS+        Y  I+ GL K+ +      +LA M+ 
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576

Query: 576 EG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           E    +   +Y  +I    ++ ++      +  M   G+ P+  T  SL++GL   +++ 
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 +++ +    LD   Y  LI+G  K      AS L   +L +G  P    +  L+
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 19/223 (8%)

Query: 115 MEGLCQNMVKERYPNVRE------------ALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
           M GLC+N   ++   +R+            A  +L+  F     +  A  +   +   G 
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVF---VYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
             S  ++N ++       R   + V    +YK+M+K G+  ++ T   L++ L +   + 
Sbjct: 686 NPSQPIYNSLISGF----RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A + +  M   G  P+   + +++ GL    +    V +  EM    +   +  Y  +I
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
               RE  L+EA RL   M    ++PD  T++ L++    NL+
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQ 844


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 238/541 (43%), Gaps = 41/541 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+  SV  +N VL A+ +     A   F    M+  G+ PNV T N L+  L      + 
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRFF--DSMLSDGVAPNVYTYNILVRALCGRGHRKE 208

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL   R M   GC PN  T+  ++        VD +  ++G M + G++  L  +  ++ 
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            +C+  K+E+A ++F  M    L PD ++Y  L+   C+     +A  +  +M   G+ P
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKC 394
               F  ++  +C+ G  + +V  +        +   VT    AL++  C  G  FL   
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVT--FTALIDGFCKKG--FLDDA 384

Query: 395 ILEKMADRKIADCD------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           +L   A R +  C        +N  I   C    + +A ELL  M    + PD  TYS  
Sbjct: 385 LL---AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 441

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   CK C+   A  + +Q+  + ++ D+I+YS L+  LC  +++++A  +F  M K G 
Sbjct: 442 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGL 501

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                ++  LI G C    V+ A+ L      +G      TY+ ++ GL K  RA +   
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L ++  E            I + ++ + L  C        KA L    +++L+LL G  
Sbjct: 562 LLFKLYHEDP----------IPANTKYDALMHCCR------KAEL----KSVLALLKGFC 601

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               ++        ++  +  LD S+Y++LI+G  + G   +A      ML  G+ P++T
Sbjct: 602 MKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNST 661

Query: 689 T 689
           +
Sbjct: 662 S 662



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 133/568 (23%), Positives = 244/568 (42%), Gaps = 37/568 (6%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE--EKRGFAD 185
           PNV    I LV +         A+ +L +M   G   +V  +N ++ A     E  G   
Sbjct: 188 PNVYTYNI-LVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 246

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            V + +E    G+ PN+ T N ++  + +  ++E A   F  M ++G  P+  ++  ++ 
Sbjct: 247 LVGMMRE---GGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVG 303

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G        +++S+  EM   GI  ++  +T +I ++C+   LE A+ L + MR   L  
Sbjct: 304 GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQM 363

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +E+T+  LI+  C+   LDDA   +  M    + P+   +  ++ G C VG+ DE+   L
Sbjct: 364 NEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423

Query: 366 EDKCGYVTSPH--------NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
            +       P         +A  + C     F L + +LEK     + D  +++  IR L
Sbjct: 424 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV---LPDAITYSSLIRVL 480

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C  + +  A+ L   M+   + PD  TY++ + G CK  N E AL +  ++    ++ D 
Sbjct: 481 CGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDV 540

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++YS L+ GL +  +  EA ++   +       +++ ++ L++  C  +   K++    L
Sbjct: 541 VTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH--CCRKAELKSV----L 594

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           A   G           M GL+      +   V   ML     LD   Y +LI        
Sbjct: 595 ALLKGF---------CMKGLM-----NEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 640

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           +     F   M++ G  P+  + +SL+ GL +   +      I +L++   + D+     
Sbjct: 641 VMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKA 700

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVP 685
           LI+    EG       +L  M   G +P
Sbjct: 701 LIDLNLNEGNVDAVLDVLHGMAKDGLLP 728



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 9/414 (2%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L  A R F  M +  + P+  TY  L+  LC      +A  IL DM   G  P    +  
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 230

Query: 348 IVRGLCEVGKFDES---VNFLED---KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
           +V      G+ D +   V  + +   K   VT   N+++   C AGK   A+ + ++M  
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVT--FNSMVNGMCKAGKMEDARKVFDEMVR 288

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +A D  S+N  +   C+     +A  +   M    ++PD  T+++ +   CK  N E 
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ + RQ+  + L ++ ++++ L++G C+   + +A+     M +     S   +N LI 
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C++ ++D+A  L     + G      TY+ I+    K         +  QML +G   
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 468

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D   Y  LI+ +  + +L D  + F  M+K GL PD  T  SL+ G      +    S  
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH 528

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +K+V    + D   Y++LINGL K     +A  LL  +  +  +P  T +  L+
Sbjct: 529 DKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 91/398 (22%), Positives = 147/398 (36%), Gaps = 66/398 (16%)

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +P  L Y  ++  L  +  L  A    + M+  G+ P    +  +VR LC  G   E+++
Sbjct: 153 VPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
            L D  G    P                              +  ++N  +       E+
Sbjct: 212 ILRDMRGAGCGP------------------------------NVVTYNTLVAAFFRAGEV 241

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  L+G M    + P+  T+++ V G CK    EDA +VF ++  + L  D +SY+ L
Sbjct: 242 DGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTL 301

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           V G C+     EA+ VF  M++ G      +F  LI+ +C    +++A+ L       G 
Sbjct: 302 VGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGL 361

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+T ++ G  K     D L+ +  M        V  Y  LI       ++ +   
Sbjct: 362 QMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARE 421

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             + M   GL PD  T                                   Y+ +I+   
Sbjct: 422 LLHEMEAKGLKPDVVT-----------------------------------YSTIISAYC 446

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           K   T  A  L   ML KG +PDA T+  L+    GE+
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 246/565 (43%), Gaps = 73/565 (12%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGF--ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           NSG F     VF+     +  E+R F   +F+ V++   KA +                 
Sbjct: 76  NSGDFGTLFQVFD----RMKRERRVFIEKNFILVFRAYGKAHLP---------------- 115

Query: 216 NRIESALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              E A++ F RM  +  C  + R+F  V+  +I       ++    E ++ G+  + + 
Sbjct: 116 ---EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRAL----EFYECGVGGKTNI 168

Query: 275 ------YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
                 +  +I  +C+   ++ AI +F+ M      PD  TY  L++ LC+  R+D+A  
Sbjct: 169 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 228

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
           +L++M + G  P+   F  ++ GLC+ G        +++                     
Sbjct: 229 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDN--------------------- 267

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
            FL  C+  ++         ++N  I  LC   ++ KA  LL RMV S  VP+  TY   
Sbjct: 268 MFLKGCVPNEV---------TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTL 318

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  K     D + +   +  +    +  +YS L+ GL + EK  EA+ ++  M + GC
Sbjct: 319 INGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC 378

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +   ++ LI GLC   K+D+A  +     + G +    TY+ ++ G  K   ++  + 
Sbjct: 379 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 438

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           V  +M    C  +   Y +LI  + E  KL++  + +  M+  GL PD     S++HGL 
Sbjct: 439 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 498

Query: 629 DGSQLHLVSSGINKLV---SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           +   + +     N+++   SDS+  D   YNIL+  L K+   S A  LL+ ML +G  P
Sbjct: 499 NAGSVEVGLKLFNEMLCQESDSQP-DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 557

Query: 686 DATTHGLLVGS---SVGEEIDSRRF 707
           D  T  + + +    +    D R F
Sbjct: 558 DLITCNIFLNALREKLNPPQDGREF 582



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 122/526 (23%), Positives = 207/526 (39%), Gaps = 106/526 (20%)

Query: 58  RHNLSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           + N+SP+ L     I+ +     +  A+++F+ ++IQK  +    TYC +          
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK-CEPDVFTYCTL---------- 213

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
             M+GLC+                         R++ A+ +L  M   G   S   FNV+
Sbjct: 214 --MDGLCK-----------------------EDRIDEAVLLLDEMQIEGCFPSSVTFNVL 248

Query: 173 LGAIVEEKRGFADFVFVYK---EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           +  + ++     D V V K    M   G VPN  T N ++  L    +++ A+    RM 
Sbjct: 249 INGLCKK----GDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 304

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILG---------------------------- 261
              C PN  T+  +I GL+   R  D V +L                             
Sbjct: 305 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 364

Query: 262 -------EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
                  +M + G Q  +  Y+ +I  LCRE KL+EA  +   M      P+  TY  LI
Sbjct: 365 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
               +      A  + ++M      P +  +  ++ GLCE GK  E++       G    
Sbjct: 425 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 484

Query: 375 P----HNALLECCCNAGKFFLAKCILEKM----ADRKIADCDSWNIPIRWLCENEEIRKA 426
           P    +++++   CNAG   +   +  +M    +D +  D  ++NI +R LC+   I  A
Sbjct: 485 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQ-PDVVTYNILLRALCKQNSISHA 543

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +LL  M+     PD  T + F+    +  N     R F         LD     +LV  
Sbjct: 544 IDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF---------LD-----ELVVR 589

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L + ++I  A ++   M +     ++S++  +I  LC  +KV   I
Sbjct: 590 LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAII 635


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 246/565 (43%), Gaps = 73/565 (12%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGF--ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           NSG F     VF+     +  E+R F   +F+ V++   KA +                 
Sbjct: 92  NSGDFGTLFQVFD----RMKRERRVFIEKNFILVFRAYGKAHLP---------------- 131

Query: 216 NRIESALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              E A++ F RM  +  C  + R+F  V+  +I       ++    E ++ G+  + + 
Sbjct: 132 ---EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRAL----EFYECGVGGKTNI 184

Query: 275 ------YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
                 +  +I  +C+   ++ AI +F+ M      PD  TY  L++ LC+  R+D+A  
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
           +L++M + G  P+   F  ++ GLC+ G        +++                     
Sbjct: 245 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDN--------------------- 283

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
            FL  C+  ++         ++N  I  LC   ++ KA  LL RMV S  VP+  TY   
Sbjct: 284 MFLKGCVPNEV---------TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTL 334

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  K     D + +   +  +    +  +YS L+ GL + EK  EA+ ++  M + GC
Sbjct: 335 INGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC 394

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +   ++ LI GLC   K+D+A  +     + G +    TY+ ++ G  K   ++  + 
Sbjct: 395 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 454

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           V  +M    C  +   Y +LI  + E  KL++  + +  M+  GL PD     S++HGL 
Sbjct: 455 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 514

Query: 629 DGSQLHLVSSGINKLV---SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           +   + +     N+++   SDS+  D   YNIL+  L K+   S A  LL+ ML +G  P
Sbjct: 515 NAGSVEVGLKLFNEMLCQESDSQP-DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 573

Query: 686 DATTHGLLVGS---SVGEEIDSRRF 707
           D  T  + + +    +    D R F
Sbjct: 574 DLITCNIFLNALREKLNPPQDGREF 598



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 143/624 (22%), Positives = 275/624 (44%), Gaps = 60/624 (9%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L S   IFK  S    ++    T+  +I     +G+   +  +   M +ER   + +  I
Sbjct: 60  LQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFI 119

Query: 136 SLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +  ++   +    A+ +   M +    + +V  FN VL  I++E   F   +  Y+  V
Sbjct: 120 LVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL-FHRALEFYECGV 178

Query: 195 --KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
             K  I PNV + N +++ + +   ++ A++ FR M  + C P+  T+  ++ GL    R
Sbjct: 179 GGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDR 238

Query: 253 VDDSVSILGEMFDLGIQLELSF-----YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
           +D++V +L E     +Q+E  F     +  +I  LC++  +    +L   M     +P+E
Sbjct: 239 IDEAVLLLDE-----MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNE 293

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  +IN LC   +LD A  +L+ M+     P D  +  ++ GL + G+  + V+ L  
Sbjct: 294 VTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLL-- 351

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                    ++L E   +A ++                   +++  I  L + E+  +A 
Sbjct: 352 ---------SSLEERGHHANEY-------------------AYSTLISGLFKEEKSEEAM 383

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L  +MV     P+   YSA + G C+    ++A  +  ++  +    ++ +YS L++G 
Sbjct: 384 GLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGF 443

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            +     +A+ V+  M+KN C  +   +++LI+GLC   K+ +A+ + +     G     
Sbjct: 444 FKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV 503

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVE--GCALDVEAYCILIQSMSEQNKLKDCALFF 605
             Y+ ++ GL      +  L +  +ML +      DV  Y IL++++ +QN +       
Sbjct: 504 VAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLL 563

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           N M+  G  PD  T    L+ L +          +N      E LD      L+  L K 
Sbjct: 564 NSMLDRGCNPDLITCNIFLNALRE---------KLNPPQDGREFLDE-----LVVRLHKR 609

Query: 666 GLTSQASYLLDLMLGKGWVPDATT 689
                A+ ++++ML K   P+A+T
Sbjct: 610 QRIVGAAKIIEVMLQKFLPPNAST 633


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 218/472 (46%), Gaps = 2/472 (0%)

Query: 225 FRRM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
           +RRM H+    P + TF +  + L    R D+++++L  M   G   +   Y  +I  LC
Sbjct: 146 YRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALC 205

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
            +  + EA  L   M  +    D  T+++++  +C   R+ +A  +++ M+  G  P   
Sbjct: 206 DQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVM 265

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
            +  +++GLC V + DE+   L           N ++  C   GK   A  + E M  + 
Sbjct: 266 TYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              D  +++I +  LC+   I  A  LL  M      P+  TY+  +   CK   ++D  
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 385

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++SA+ L L+S  Y+ ++  LC+  ++ EA+ +   M   GC+    S+N +IY L
Sbjct: 386 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 445

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   ++++A  +       G      TY  I+  L++  R +D + +  +M++ GC+LDV
Sbjct: 446 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDV 505

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            +Y  LI++M +   +    +    M + G+ P+  +   L+  L    ++        +
Sbjct: 506 VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQ 565

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++     D   YN LINGL K G    A  LL+ +  +   PD  T+ +L+
Sbjct: 566 MLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 175/340 (51%), Gaps = 6/340 (1%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           +L+V +FN V+G  + E +  A+   +Y+ M   G  P+  T + L+  L +  RI SA+
Sbjct: 292 ELNVVLFNTVIGGCLAEGK-LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 350

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
              R M KKG  PN  T+ IV+     N   DD+ ++L EM   G+ L    Y  +I  L
Sbjct: 351 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 410

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++ +++EA+ L + MR+    PD  +Y  +I  LC N ++++A  + E+++  G+    
Sbjct: 411 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
             +  I+  L   G++ ++V   ++     C      +N L++  C  G    +  +LE+
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 530

Query: 399 MADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           MA++ I   + S+NI I  LC+   +R A EL  +M+   + PD  TY+  + G CK+  
Sbjct: 531 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 590

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
              AL +  ++  +++  D I+Y+ L+   C+V  + +A 
Sbjct: 591 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 630



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/471 (20%), Positives = 210/471 (44%), Gaps = 37/471 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R + A+ +L  M   G      ++  V+ A+ ++  G  +   +  EM+  G   +V+T 
Sbjct: 174 RADEALALLRGMARHGCVPDAVLYQTVIHALCDQG-GVTEAATLLNEMLLMGCAADVNTF 232

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++  +    R+  A     RM  KGC P   T+  +++GL    + D++ ++LG + +
Sbjct: 233 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE 292

Query: 266 L-------------------------------GIQLELSFYTCIIPMLCRENKLEEAIRL 294
           L                               G Q +   Y+ ++  LC+  ++  A+RL
Sbjct: 293 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 352

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            + M      P+ +TY  +++  C+N   DD   +LE+M   GLT     +  ++  LC+
Sbjct: 353 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 412

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
            G+ DE++  +++      +P    +N ++   CN  +   A+ + E + +  + A+  +
Sbjct: 413 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 472

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I  L  +   + A  L   M++     D  +Y+  +   CK  N + +L +  +++
Sbjct: 473 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 532

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + +  +++SY+ L+  LC+  ++ +A+E+   M   G +    ++N LI GLC M  + 
Sbjct: 533 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 592

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
            A+ L    ++        TY  ++    K++   D  ++L + +   C +
Sbjct: 593 AALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPV 643



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 118/233 (50%), Gaps = 3/233 (1%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  MI  L   G ++E  GL Q M  +   P++  +  ++++   N+ ++  A  +  N+
Sbjct: 403 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI-CSYNTIIYHLCNNEQMEEAEHMFENL 461

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G   +   +N ++ A++ + R + D V + KEM+  G   +V + N L++ + +   
Sbjct: 462 LEEGVVANGITYNTIIHALLRDGR-WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 520

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ +L     M +KG  PN+ ++ I+I  L    RV D++ +  +M + G+  ++  Y  
Sbjct: 521 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 580

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           +I  LC+   +  A+ L + +   ++ PD +TY  LI+  C+   LDDA  +L
Sbjct: 581 LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 40/273 (14%)

Query: 425 KAYELLGRMVVSSVVPDCA-TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           + + L  RMV    VP    T+       C+L   ++AL + R ++    V D++ Y  +
Sbjct: 141 RRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 200

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +  LC    +TEA  +   M   GC+   ++F+ ++ G+C + +V +A RL     + G 
Sbjct: 201 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 260

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TY  ++ GL ++++A +   +L ++      L+V  +  +I     + KL +   
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEATE 316

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            +  M   G  PD  T                                   Y+IL++GL 
Sbjct: 317 LYETMGLKGCQPDAHT-----------------------------------YSILMHGLC 341

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           K G    A  LL  M  KG+ P+  T+ +++ S
Sbjct: 342 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 143/640 (22%), Positives = 261/640 (40%), Gaps = 82/640 (12%)

Query: 62  SPDH-------LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           SP+H       +++ L   + +  AL  FK ++    F+HT  T+  MI KL + G V+ 
Sbjct: 34  SPNHAEIKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDS 93

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           ++ L Q M  + +    +  IS++  +        A+ +   +   G   SV ++N VL 
Sbjct: 94  VQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLD 153

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
            ++ E R       VY++M + G  PNV T N LL+ L + N+++ A      M  KGCC
Sbjct: 154 TLLGENR-IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 212

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN+ ++  VI  +     V +    L E F+  +    S Y  +I  LC+E   +  + L
Sbjct: 213 PNAVSYTTVISSMCEVGMVKEGRQ-LAERFEPVV----SVYNALINGLCKERDYKGGVEL 267

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M    + P+ ++Y  LIN L  + +++ A  +L  M+  G  P       +V+G   
Sbjct: 268 MSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV 327

Query: 355 VGKFDESVNFLEDKC-GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
            G   ++++       G+   P                              +  ++N  
Sbjct: 328 RGTTFDALDMWNQMIRGFGLQP------------------------------NVVAYNTL 357

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           ++  C +  I KA  +   M      P+  TY + + G  K  + E A+ ++ ++     
Sbjct: 358 VQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGC 417

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             + + Y+ +VE LC+  K  EA  +   MSK  C+ S  +FN  I GLC   ++D A +
Sbjct: 418 CPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 477

Query: 534 L-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           + R +           TY +++ GL K  R ++   +  ++ + G       Y       
Sbjct: 478 VFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYN------ 531

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
                                        +LLHG  +     +    + K++ + +  D 
Sbjct: 532 -----------------------------TLLHGSCNAGLPGIALQLVGKMMVNGKSPDE 562

Query: 653 SMYNILINGLWKEGLTSQASYLLDLML--GKGWVPDATTH 690
              N++I    K+G   +A  +LDL+    + W PD  ++
Sbjct: 563 ITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISY 602



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 198/444 (44%), Gaps = 4/444 (0%)

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           + +V +   + + G    +  Y  ++  L  EN+++    +++ M+     P+  TY  L
Sbjct: 127 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 186

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           +  LC+N ++D A  +L +M   G  P    +  ++  +CEVG   E    L ++   V 
Sbjct: 187 LKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQ-LAERFEPVV 245

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGR 432
           S +NAL+   C    +     ++ +M ++ I+ +  S++  I  L  + +I  A+ LL +
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYSKLVEGLCQVE 491
           M+     P+  T S+ V G        DAL ++ Q +    L  + ++Y+ LV+G C   
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHG 365

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            I +AV VF  M + GCS +  ++  LI G      ++ A+ + +   +SG       YT
Sbjct: 366 NIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYT 425

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++  L +  + K+   ++  M  E CA  V  +   I+ + +  +L      F  M + 
Sbjct: 426 SMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 485

Query: 612 GLVPDR-ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
              P    T   LL GLA  +++        ++        +S YN L++G    GL   
Sbjct: 486 YRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGI 545

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A  L+  M+  G  PD  T  +++
Sbjct: 546 ALQLVGKMMVNGKSPDEITMNMII 569



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 182/406 (44%), Gaps = 28/406 (6%)

Query: 87  SIQKRFQHTADTYCKMILKL----GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFV 142
            + +RF+     Y  +I  L       G VE M  + +  +    PNV  +  +L+    
Sbjct: 236 QLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGIS---PNVI-SYSTLINELS 291

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFN-VVLGAIVEEKRGFA-DFVFVYKEMVKA-GIV 199
           N  ++  A  +L  M   G   ++   + +V G  V   RG   D + ++ +M++  G+ 
Sbjct: 292 NSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV---RGTTFDALDMWNQMIRGFGLQ 348

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV   N L++       I+ A+  F  M + GC PN RT+  +I G      ++ +V I
Sbjct: 349 PNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYI 408

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             +M   G    +  YT ++  LCR +K +EA  L ++M   +  P   T+   I  LC+
Sbjct: 409 WNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 468

Query: 320 NLRLDDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDESVNFLED----KCGYVTS 374
             RLD A  +   M      P + V + +++ GL +  + +E+     +       + TS
Sbjct: 469 AGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTS 528

Query: 375 PHNALLECCCNAGKFFLAKCILEK-MADRKIADCDSWNIPIRWLCENEEIRKAYELL--- 430
            +N LL   CNAG   +A  ++ K M + K  D  + N+ I   C+  +  +A ++L   
Sbjct: 529 TYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLV 588

Query: 431 --GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             GR       PD  +Y+  + G C+    ED + +F ++ ++ ++
Sbjct: 589 SCGR---RKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERII 631


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 159/618 (25%), Positives = 268/618 (43%), Gaps = 52/618 (8%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           +S D ++ VL +  D   AL  F  +S      HT +T   M+  L +   VE+M  + +
Sbjct: 87  VSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFE 146

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVLGAI 176
            M K+    +R  L + +  F     + G +R    VL  M   GF L+   +N ++  +
Sbjct: 147 FMQKKI---IRRDLDTYLTIF-KALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 177 VEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
           ++   GF  + + VY+ MV  G+ P++ T + L+  L +    E  +   + M   G  P
Sbjct: 203 IQS--GFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  TF I I+ L    ++D++  I   M D G   +L  YT +I  LC   +LE A  LF
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M+A    PD++ Y  L++   +   LD   +    M   G  P    F  +V  LC+ 
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 356 GKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIADCD-SW 410
             FDE+    +   K G + + H  N L+     AG+   A  +L  M    +     ++
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           NI I +  ++ E  KA E   +M    +VP+    +A +    ++    +A  +F  +  
Sbjct: 441 NIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
             L  DS++Y+ +++   +V ++ EAV +   M +NGC       N LI  L    +VD+
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDL--------------------- 566
           A ++         S T  TY  ++ GL K   +Q+A +L                     
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620

Query: 567 -----------LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
                      L + ++M V  C  DV  Y  +I  + ++NK+     FF+  +K  + P
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH-QLKKSMHP 679

Query: 616 DRETMLSLLHGLADGSQL 633
           D  T+ +LL GL    Q+
Sbjct: 680 DHVTICTLLPGLVKCGQI 697



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 139/616 (22%), Positives = 271/616 (43%), Gaps = 29/616 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+   I  LG AG ++E   + + M  E           L+ +  N  ++  A  + V M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFAD---FVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
            + G K       V+   ++++   F D   F   + +M   G +P+V T   L++VL +
Sbjct: 324 KANGHKPD----QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
               + A   F  M K+G  PN  T+  +I GL+   R++D++ +LG M  +G+Q     
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y   I    +  +  +A+  F+ M+A  ++P+ +     +  L E  RL +A  +   + 
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFF 390
             GL P    +  +++   +VG+ DE+VN L +       P     N+L++    AG+  
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 391 LAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  + ++M D K++    ++N  +  L +   ++KA EL   M+     P+  +++  +
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              CK    E AL++F +++      D ++Y+ ++ GL +  K+  A   F  + K   S
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK---S 676

Query: 510 LSSSSFNI--LIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           +      I  L+ GL    ++  AI + R   Y        S +  +M G + ++   D 
Sbjct: 677 MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL-VEAEMDK 735

Query: 567 LVVLAQMLVEGCALDVEAYCI-LIQSMSEQNK-LKDCALFFNVMVKAGLVPDRETMLSLL 624
            ++ A+ LV       +++ I L++ + +  + L    +F     K G+ P   +   L+
Sbjct: 736 AIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLI 795

Query: 625 HGLADGSQLHLVSSGINKLVSDSE----VLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             L    ++H      + L  D +      D+  +N+L+    K G  ++   L   M+ 
Sbjct: 796 GELL---EVHYTEKAWD-LFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851

Query: 681 KGWVPDATTHGLLVGS 696
           +   PDA T+ +++ S
Sbjct: 852 RRCKPDAITYNIVISS 867



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 143/653 (21%), Positives = 270/653 (41%), Gaps = 49/653 (7%)

Query: 93   QHTADTYCKMILKLGLAGNV-EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
            Q TA TY   I   G +G   + +E   +   K   PN+     SL +S     R+  A 
Sbjct: 434  QPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL-YSLAEMGRLREAK 492

Query: 152  RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLE 210
             +   +   G       +N+++      K G  D  V +  EM++ G  P+V  +N L++
Sbjct: 493  TMFNGLRENGLAPDSVTYNMMMKCY--SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 211  VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
             L++  R++ A   F RM      P   T+  ++ GL    RV  ++ +   M +     
Sbjct: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSP 610

Query: 271  ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
                +  ++   C+ +++E A+++F  M  +D  PD LTY  +I  L +  +++ A    
Sbjct: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 331  EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
              +    + P       ++ GL + G+  ++++   D    V    N         G   
Sbjct: 671  HQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 391  LA---KCIL--EKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVS-SVVPDCA 443
             A   K I+  E++    I   DS+ IP +R LC+++    AY++  +      + P  A
Sbjct: 730  EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789

Query: 444  TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            +Y+  +    ++   E A  +F+ +       D+ +++ L+    +  KITE  E++  M
Sbjct: 790  SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849

Query: 504  SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
                C   + ++NI+I  L     +DKA+       SS    T  TY  ++ GL K+ R 
Sbjct: 850  ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 564  KDLLVVLAQM-----------------------------------LVEGCALDVEAYCIL 588
            ++ + +  +M                                   + EG   D+++Y IL
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 589  IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
            +  +    ++ +   +FN +   GL PD      +++GL    ++    +  N++ +   
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 649  VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGE 700
            V D   YN L+  L   G+  QA  + + +   G  PD  T+  L+ G S+ E
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/502 (21%), Positives = 213/502 (42%), Gaps = 5/502 (0%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           ++   +T N++LE L   +++E     F  M KK    +  T+  + K L     +    
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
           ++L +M   G  L    Y  +I +L +     EA+ +++ M +  L P   TY  L+  L
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVT 373
            +    +    +L++M  +GL P    F   +R L   GK DE+        ++ CG   
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDL 297

Query: 374 SPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +  L++  CNAG+   AK +  KM A+    D   +   +    +  ++    E   +
Sbjct: 298 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M     +PD  T++  V   CK  ++++A   F  +  Q ++ +  +Y+ L+ GL +  +
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I +A+++   M   G   ++ ++NI I       +  KA+       + G          
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            +  L ++ R ++   +   +   G A D   Y ++++  S+  ++ +     + M++ G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             PD   + SL+  L    ++       +++           YN L++GL KEG   +A 
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            L + M+ K   P+  +   L+
Sbjct: 598 ELFESMIEKKCSPNTISFNTLL 619



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 168/411 (40%), Gaps = 65/411 (15%)

Query: 178  EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            + KR    +    K   K GI P + + N L+  L E +  E A D F+ M   GC P++
Sbjct: 764  KHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823

Query: 238  RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             TF +++             ++ G                      +  K+ E   L+K 
Sbjct: 824  FTFNMLL-------------AVHG----------------------KSGKITELFELYKE 848

Query: 298  MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            M +    PD +TY  +I+ L ++  LD A D   D++     PT   +  ++ GL +VG+
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 358  FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
             +E++   E+   Y   P+ A+     N                 KI D ++        
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYG--------------KIGDTET-------- 946

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                    A +L  RMV   + PD  +Y+  V   C     ++AL  F ++ +  L  D 
Sbjct: 947  --------ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            I+Y++++ GL + +++ EA+ ++  M   G      ++N L+  L +   V++A R+   
Sbjct: 999  IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058

Query: 538  AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
               +G      TY  ++ G    +  +    V   M+V+GC  ++  Y  L
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 32/461 (6%)

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           + T   +++ L  + +V+D  ++   M    I+ +L  Y  I   L     L +   +  
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            MR    + +  +Y  LI+ L ++    +A ++   M+  GL P+   +  ++  L   G
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL---G 238

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
           K  +S                             +   +L++M D  +  +  ++ I IR
Sbjct: 239 KKRDSE----------------------------MVMVLLKEMEDLGLRPNVYTFTICIR 270

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            L    +I +AYE+  RM      PD  TY+  +   C     E+A  +F ++ A     
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D + Y  L++       +    E +  M  +G      +F IL+  LC  R  D+A    
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            +    G      TY  ++ GL++  R +D L +L  M   G       Y I I    + 
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            +       F  M   G+VP+     + L+ LA+  +L    +  N L  +    DS  Y
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           N+++    K G   +A  LL  M+  G  PD      L+ S
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 160/346 (46%), Gaps = 21/346 (6%)

Query: 4    KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRH-NLS 62
            +L +  I +K  K + ++  ++S +C     L  E  +++ H T       + +++   +
Sbjct: 768  ELYAYQIFDKFTKKLGISPTLASYNC-----LIGE--LLEVHYTEKAWDLFKDMKNVGCA 820

Query: 63   PDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
            PD      L+ V   +  ++   +++K + I +R +  A TY  +I  L  + N+++   
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEM-ISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 118  LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL---G 174
               ++V   +         L+       R+  AMR+   M+  G K +  +FN+++   G
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 175  AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
             I + +        ++K MV  GI P++ +   L++ L    R++ AL  F  +   G  
Sbjct: 940  KIGDTETACQ----LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLD 995

Query: 235  PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
            P+   +  +I GL  + R+++++++  EM + GI  +L  Y  ++  L     +E+A R+
Sbjct: 996  PDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRM 1055

Query: 295  FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            ++ ++   L PD  TY  LI     +   + A  + ++M+V G  P
Sbjct: 1056 YEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 236/521 (45%), Gaps = 28/521 (5%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N+++  ++++  GF  +  V KE+ + G   + D    L++   + + IE A++ F  M 
Sbjct: 95  NMIIDMLIKDN-GFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMK 153

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
              C P+  T+  V+  ++    V  ++ I   M  L     ++ ++ +I  +C+  K +
Sbjct: 154 DFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQ 213

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
            A+++F  M    ++P+++TY  +I+ LC+  + D A  +   M   G  P    +  ++
Sbjct: 214 NALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALL 273

Query: 350 RGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI- 404
            G C++G+ DE++  L+  +K  YV     ++ L++    A +F  A+    KM +  I 
Sbjct: 274 HGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIK 333

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D   + I ++ L +  + + A  LL  M    +VPD   Y+A + G C L   ++A  +
Sbjct: 334 PDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSL 393

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             ++S       + +Y+ L+ G+C+   + +A ++F  M K+GC  S  +FN LI G C 
Sbjct: 394 HLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCK 453

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              ++KA   + L Y        S + ++  G  ++     L  ++ Q+   G  L ++A
Sbjct: 454 AGNIEKA---QLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSG--LILKA 508

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y IL+Q                 +  +G  P+  T   L+HG      ++       +L 
Sbjct: 509 YNILMQ-----------------LTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQ 551

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                 DS  Y  LINGL        A  +LD +L  G  P
Sbjct: 552 LKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTP 592



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 165/399 (41%), Gaps = 53/399 (13%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EM +  I+PN  T   ++  L +  + + A   F  M   GC P+S T+  ++ G  
Sbjct: 218 MFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFC 277

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              RVD+++ +L         L+   Y+C+I  L R  + E+A   ++ M   ++ PD +
Sbjct: 278 KLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVI 337

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---- 364
            Y  ++  L +  +  DA  +L +M   GL P    +  +++G C++G  DE+ +     
Sbjct: 338 LYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEI 397

Query: 365 -----LEDKCGYV------------------------------TSPHNALLECCCNAGKF 389
                    C Y                                   NAL++  C AG  
Sbjct: 398 SKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNI 457

Query: 390 FLAKCILEKM--------------ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
             A+ +  KM                 ++ D  S    +  LC++  I KAY +L ++  
Sbjct: 458 EKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTD 517

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S   P+  TY+  + G CK  N   A ++F+++  + L  DS++Y  L+ GL    +  +
Sbjct: 518 SGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREED 577

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           A  V   + KNGC+  +  +   +   C   K+  A  L
Sbjct: 578 AFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSL 616



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 41/325 (12%)

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
           D++ + I+   + + I KA E    M      PD  TY+  +    +      AL ++ +
Sbjct: 127 DAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNR 186

Query: 468 VSAQSLVLDSISYSKLVE-----------------------------------GLCQVEK 492
           +   + + +  ++S L++                                   GLCQ +K
Sbjct: 187 MLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQK 246

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT--TSTY 550
              A  +F  M  +GC   S ++N L++G C + +VD+A+ L  L Y     Y      Y
Sbjct: 247 ADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGL--LKYFEKDRYVLDKQGY 304

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + ++ GL + +R +D  V   +M       DV  Y I+++ +S+  K KD     N M +
Sbjct: 305 SCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTE 364

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS-MYNILINGLWKEGLTS 669
            GLVPD     +L+ G  D   L    S ++  +S ++   S+  Y ILI G+ + GL  
Sbjct: 365 RGLVPDTHCYNALIKGYCDLGLLDEAKS-LHLEISKNDCFSSACTYTILICGMCRSGLVG 423

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
            A  + + M   G  P   T   L+
Sbjct: 424 DAQQIFNEMEKHGCYPSVVTFNALI 448



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 104/500 (20%), Positives = 194/500 (38%), Gaps = 60/500 (12%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++      G V+E  GL +   K+RY   ++    L+       R   A      M
Sbjct: 268 TYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKM 327

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                K  V ++ +++  + +  + F D + +  EM + G+VP+    N L++   +   
Sbjct: 328 TEHNIKPDVILYTIMMKGLSKAGK-FKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGL 386

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A      + K  C  ++ T+ I+I G+  +  V D+  I  EM   G    +  +  
Sbjct: 387 LDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNA 446

Query: 278 IIPMLCRENKLEEAIRLFKMM-----------------RALD------------------ 302
           +I   C+   +E+A  LF  M                 R LD                  
Sbjct: 447 LIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLIL 506

Query: 303 -------------LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
                          P+ +TY  LI+  C+   ++ A  + +++ + GL+P    +  ++
Sbjct: 507 KAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLI 566

Query: 350 RGLCEVGKFDESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
            GL    + +++       L++ C  +T  + + +   C   K  LA  +  K   R I 
Sbjct: 567 NGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYL-RSIP 625

Query: 406 DCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
             DS  +  +    E  E+ +A   L  M         A Y+ +++G C+    E+AL++
Sbjct: 626 GRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKI 685

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +   ++++   S  KL+  L +V  +  A E+F      G  L     N L+  L  
Sbjct: 686 FFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLR 745

Query: 525 M-----RKVDKAIRLRSLAY 539
                 R  D   R++SL Y
Sbjct: 746 SEDKRNRAFDLLSRMKSLGY 765



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 128/323 (39%), Gaps = 10/323 (3%)

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
           + +P N+LL       +FF+          R++    S N+ I  L ++      +++L 
Sbjct: 66  IKNPPNSLL-----GFRFFIWASKF-----RRLRSWVSHNMIIDMLIKDNGFELYWQVLK 115

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            +           ++  +    K+   E A+  F  +       D  +Y+ ++  + + E
Sbjct: 116 EIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKE 175

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            +  A+ ++  M K  C  + ++F+ILI G+C   K   A+++              TYT
Sbjct: 176 VVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYT 235

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I+ GL + Q+A     +   M   GC  D   Y  L+    +  ++ +         K 
Sbjct: 236 IIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKD 295

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
             V D++    L+ GL    +         K+   +   D  +Y I++ GL K G    A
Sbjct: 296 RYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDA 355

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             LL+ M  +G VPD   +  L+
Sbjct: 356 LRLLNEMTERGLVPDTHCYNALI 378



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 5/156 (3%)

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           VL ++   G ++  +A+ +LIQ+ ++ + ++     F +M      PD  T  ++LH + 
Sbjct: 113 VLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMV 172

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               + L     N+++  + + + + ++ILI+G+ K G T  A  + D M  +  +P+  
Sbjct: 173 RKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKI 232

Query: 689 THGLLV-GSSVGEEIDSRRFAF----DSSSFPDSVS 719
           T+ +++ G    ++ D     F    D    PDSV+
Sbjct: 233 TYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVT 268


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/551 (22%), Positives = 246/551 (44%), Gaps = 42/551 (7%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R FA    ++ +M+++G+  +       +    E+  ++ A     RM  +G   ++  +
Sbjct: 177 RQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPY 236

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            +++ GL  N RV ++V +   M ++G+  +   Y  ++   CR  +LE A+R+   M  
Sbjct: 237 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIR 296

Query: 301 LDLMPDE-----------------------------------LTYEELINCLCENLRLDD 325
           L  +P E                                     Y  LI+ LC+N R DD
Sbjct: 297 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDD 356

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---NFLEDKCGYVT-SPHNALLE 381
           A+ + ++M   GL P +  +  ++  LC+ G  ++++   + + DK   VT  P+N+L+ 
Sbjct: 357 ADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLIN 416

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G    A+ +L  M    +    +   P I  LC N ++    EL   M    +  
Sbjct: 417 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAW 476

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++A + G CK    ++A R+F ++   +++ + ++++ ++EG C V  I +A +++
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M + G    + ++  LI GLC+   V KA    +   +S       + T ++ G  + 
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILI-QSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            R  +   +  +M V G  LD+ ++ I++  ++ + +K K C L F  M + G+ PD   
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL-FREMKEQGVKPDDIF 655

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              ++  L+    +    +  +++V D    ++  + +LIN L K G    A  L   ML
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 680 GKGWVPDATTH 690
               +P+  T+
Sbjct: 716 AGNVLPNKFTY 726



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 240/586 (40%), Gaps = 32/586 (5%)

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL-VNMNSGGFKLSVDVFNVVL 173
           M GLC+NM                       RV  A+ V  V +N G     V    +V 
Sbjct: 240 MYGLCKNM-----------------------RVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G    E+   A  + +  +M++ G VP+    +++++ L +   +E A     ++   G 
Sbjct: 277 GFCRMEELEMA--LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN   +  +I  L  N R DD+  +  EM   G++     Y  +I  LC+   +E+A+ 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LF  MR   +      Y  LIN  C+   LD A  +L  M+  GLTPT   +  ++ GLC
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 354 EVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
             G     +       E    +      AL+   C   K   A  + +KM D  +   + 
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I   C    IRKA++L  +MV   + PD  TY + + G C       A      +
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                VL++ S + L+ G  +  + TE   ++  M+  G  L   SF I++Y        
Sbjct: 575 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +K+  L       G       YT ++  L K +     L    QM+V+G + +   + +L
Sbjct: 635 EKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVL 694

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I ++ +   L    L    M+   ++P++ T    L   A    +   +  ++  +    
Sbjct: 695 INNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME-KAKDLHSAMLQGH 753

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +     +NILI GL K G   +A  L+  +   G+ PD  ++  ++
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 238/544 (43%), Gaps = 49/544 (9%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADF 186
           PNV  A  +L+     + R + A R+   M   G + +   + +++ A+   KRG   D 
Sbjct: 336 PNVF-AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC--KRGMIEDA 392

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M   GI   V   N L+    +   ++ A      M K+G  P + ++  +I G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  N  +   + +  EM + GI      +T +I   C++ K++EA RLF  M   +++P+
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 307 ELTYEELIN--CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC---EVGKFDES 361
           E+T+  +I   CL  N+R   A  + + M+ +GL P +  +  ++ GLC    V K +E 
Sbjct: 513 EVTFNVMIEGYCLVGNIR--KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570

Query: 362 VNFLEDKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
           V  LE+    + +    ALL      G+F     + ++MA R +  D  S+ I +    +
Sbjct: 571 VADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             +  K+  L   M    V PD   Y+  +    K  N   AL  + Q+       ++++
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 690

Query: 480 YSKLVEGLCQVEKITEAVEVFC----------------C----------MSK-------- 505
           ++ L+  LC+   +  A E+ C                C          M K        
Sbjct: 691 HTVLINNLCKSGYLGSA-ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 506 -NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G   S  SFNILI GLC   K+ +AI L S    SG S    +Y+ I+  L K+    
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
               +  +ML +G   DV AY I I+  +   +       +  M+++G+ P+ +T  +LL
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 625 HGLA 628
            G++
Sbjct: 870 SGIS 873



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 210/479 (43%), Gaps = 13/479 (2%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G   N  T   ++  L+   +   +  +  +M   G+ L+   YT  I   C    L+ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L   M +  +    + Y  L+  LC+N+R+ +A ++   M+ IG+T  +  +  +V G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 352 LCEVGKFDESVNFLED--KCGYVTSPHNALLECCCNAGKFFLAKCILE------KMAD-R 402
            C + + + ++    D  + G+V S  N    C     +    + + E      K+ D  
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEAN----CSFMIDELRKKELVEEAFSLACKLGDLG 333

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + +  ++N  I  LC+NE    A  L   M    + P+  TY+  +   CK    EDAL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F ++  + + +    Y+ L+ G C+   +  A  +   M K G + +++S++ LI GL
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C    +   + L       G ++   T+T ++ G  K ++  +   +  +M+      + 
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             + ++I+       ++     ++ MV+ GL PD  T  SL+ GL   S +   +  +  
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           L +   VL++     L+ G ++EG  ++  +L D M  +G   D  +  ++V +++ + 
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/478 (20%), Positives = 201/478 (42%), Gaps = 59/478 (12%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G+++   GL   MVKE       +   L+     +  ++  M +   
Sbjct: 416 NGYCKQ-------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 468

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   F  ++    ++K+   +   ++ +M+ + ++PN  T N ++E      
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKK-MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS------------------------- 251
            I  A   + +M + G  P++ T+  +I GL   S                         
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 252 ----------RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                     R  ++  +  EM   G++L+L  +T I+    +++  E++  LF+ M+  
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + PD++ Y  +I+ L +   +  A +  + M+V G +P       ++  LC+ G    +
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 362 V---------NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
                     N L +K  Y     N  L+     G    AK +   M    +A   S+NI
Sbjct: 708 ELLCKEMLAGNVLPNKFTY-----NCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNI 762

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I+ LC+  +I++A +L+ ++  S   PDC +YS  +   CK+ +   A  ++ ++  + 
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 473 LVLDSISYSKLVEGLCQVEKITE-AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           L  D ++Y+  +   C V   ++ A+ ++  M ++G   +  ++  L+ G+ +M   D
Sbjct: 823 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 35/303 (11%)

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +LG  + S +  +  T S  +    K+  +  A  +F ++    + LD   Y+  +   C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   +  A  +   M   G   S+  +N+L+YGLC   +V +A+ ++++  + G +    
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQM-----------------------LVE--------- 576
           TY  ++ G  +++  +  L +   M                       LVE         
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 577 ---GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              G   +V AY  LI  + +  +  D    F  M   GL P+  T   L+H L     +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  +K+      +    YN LING  K+G   +A  LL  M+ +G  P A ++  L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 694 VGS 696
           +  
Sbjct: 450 IAG 452



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           KEM+   ++PN  T N  L+       +E A D    M  +G   +  +F I+IKGL   
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++ +++ ++ ++ + G   +   Y+ II  LC+   + +A  L+  M    L PD + Y
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              I     +   D A  I  +MI  G+ P  D +  ++ G+  +  +D S
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 216/485 (44%), Gaps = 6/485 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   + + + + G +P+V + N +L  L +  +++ AL  F  M KK   PNS T+ I
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNI 259

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I  L    RV+++  IL EM    +   L     ++  LC+  KLEEA ++F+      
Sbjct: 260 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 319

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             PD +TY  LI+ L +  ++D+A  + E M+  G      V+  ++R     G+ ++  
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 379

Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
              ++       P     N  ++C   AG+    + I E +     + D  S++I I  L
Sbjct: 380 KVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  + R+   +   M       D   Y+A V G CK      A  +  ++  + +    
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y  +V+GL +++++ EA  +F      G  L+   ++ LI G   + ++D+A  +   
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G +    T+  ++  LVK +   + LV    M    C  +   Y ILI  +    K
Sbjct: 560 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 619

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
                +F+  M K GLVP+  T  +++ GLA    +    S   +  ++  + D++ +N 
Sbjct: 620 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 679

Query: 658 LINGL 662
           LI G+
Sbjct: 680 LIEGM 684



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 255/562 (45%), Gaps = 25/562 (4%)

Query: 50  YEAKIQSLR-HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           +E K Q L+  ++S   +I VL     L  A ++F  +  ++     A  Y  MI+  G 
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP-CAYAYNTMIMGYGS 197

Query: 109 AGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNM------NSG 160
           AG  E+   L + + +ER   P+V  +  S++       +V+ A+ +   M      NS 
Sbjct: 198 AGRFEDAYKLLERL-RERGCIPSVV-SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 255

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            + + +D+  + LG  VEE     D      EM  A + PN+ T+N +++ L +  ++E 
Sbjct: 256 TYNIIIDM--LCLGGRVEEAYRILD------EMEHASLFPNLLTVNIMVDRLCKARKLEE 307

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   F    ++GC P+  T+  +I GL    +VD++  +  +M D G       YT +I 
Sbjct: 308 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 367

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                 + E+  ++FK +      PD       ++C+ +   ++    I ED+   G  P
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ GL + G+  E+ N      + G+      +NA+++  C +GK   A  IL
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 487

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M ++ +     ++   +  L + + + +AY L        +  +   YS+ + G  K+
Sbjct: 488 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 547

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A  +  ++  + L  +  +++ L++ L + E+I EA+  F  M +  C  ++ ++
Sbjct: 548 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 607

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +ILI GLC ++K +KA          G      TYT ++ GL K+    D   +  +   
Sbjct: 608 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 667

Query: 576 EGCALDVEAYCILIQSMSEQNK 597
            G   D  ++  LI+ MS  N+
Sbjct: 668 NGGIPDAASFNALIEGMSNANR 689



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/495 (22%), Positives = 223/495 (45%), Gaps = 12/495 (2%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L   L    R++ A+     M +    P    + ++I  L    R + ++ +L +M ++G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
            ++ +  +T ++  L RE ++ +A+ L   ++   L PD + Y   I+C  +   +D A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-------KCGYVTSPHNALL 380
               ++   GL P D  +  ++  LC+ G+  E+              C Y    +N ++
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA---YNTMI 192

Query: 381 ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
               +AG+F  A  +LE++ +R  I    S+N  +  L +  ++ +A  L   ++     
Sbjct: 193 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 251

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+ +TY+  +   C     E+A R+  ++   SL  + ++ + +V+ LC+  K+ EA ++
Sbjct: 252 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 311

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F   S+ GC+    ++  LI GL    +VD+A RL      +G +     YT ++     
Sbjct: 312 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 371

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             R +D   V  +++  GC  D+      +  + +  +++   + F  +   G +PD  +
Sbjct: 372 HGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 431

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+HGL    Q    S+  + +      LD+  YN +++G  K G   +A  +L+ M 
Sbjct: 432 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491

Query: 680 GKGWVPDATTHGLLV 694
            K   P   T+G +V
Sbjct: 492 EKCVQPTVATYGAIV 506



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 139/593 (23%), Positives = 254/593 (42%), Gaps = 16/593 (2%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PN  +A   L  + V   R++ A+  +  M    F+ +   + V++GA+ E +R      
Sbjct: 9   PN--QACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC--PNSRTFEIVIK 245
            + ++M + G    V     L+  L    ++  AL     +  KG C  P+   + + I 
Sbjct: 67  LL-RQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV--KGSCLEPDIVLYNVCID 123

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
                  VD +     E+   G++ +   YT +I +LC+  +L EA  LF  M A   +P
Sbjct: 124 CFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP 183

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
               Y  +I       R +DA  +LE +   G  P+   F  I+  L +  K DE+++  
Sbjct: 184 CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 243

Query: 366 E---DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
           E         +S +N +++  C  G+   A  IL++M    +  +  + NI +  LC+  
Sbjct: 244 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 303

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ +AY++          PDC TY + + G  K    ++A R+F ++       + + Y+
Sbjct: 304 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 363

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR--KVDKAIRLRSLAY 539
            L+       +  +  +VF  + + GC    +  N   Y  CV +  +V+K   +     
Sbjct: 364 SLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLN--TYMDCVFKAGEVEKGRMIFEDIR 421

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S G      +Y+ ++ GL K  +A++   +   M  +G ALD  AY  ++    +  K+ 
Sbjct: 422 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                   M +  + P   T  +++ GLA   +L        +  S    L+  +Y+ LI
Sbjct: 482 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 541

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV-GEEIDSRRFAFDS 711
           +G  K G   +A  +L+ M+ KG  P+  T   L+ + V  EEI+     F S
Sbjct: 542 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 594


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 155/682 (22%), Positives = 287/682 (42%), Gaps = 52/682 (7%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           L  +LSP  L+++L       SAL +F     +  F  ++  +  ++ ++  A +   + 
Sbjct: 4   LPKSLSPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRV--AADPGLLL 61

Query: 117 GLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLG 174
                ++   + P   +  ++L+ ++      N A+ V   M +  G   ++  FN +L 
Sbjct: 62  AHAPRIIAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLN 121

Query: 175 AIVEEKR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           A VE  +   A+  F Y E  +  + PNV+T N L++V+ +    E        M   G 
Sbjct: 122 AFVESHQWARAENFFKYFEAAR--VSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGM 179

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P+  T+  +I G+  +  +  ++ +  EM + G++ ++  Y  II    +     +A  
Sbjct: 180 SPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGE 239

Query: 294 LF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           ++ +++R   + P  ++Y  +I+ LC+  R  +  +I E M           +  ++ GL
Sbjct: 240 MWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGL 299

Query: 353 CEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCD 408
            E G    +    E+  G    P     NA+L   C AG       + E+M    + +  
Sbjct: 300 SEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVR 359

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+NI ++ L EN ++  A  L   ++ +    D ATY   V G C       AL+V  + 
Sbjct: 360 SYNIFLKGLFENGKVDDAMMLWDGLLEA----DSATYGVVVHGLCWNGYVNRALQVLEEA 415

Query: 469 SAQ--SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
             +   + +D  +YS L+  LC+  ++ EA  V   M+K GC  +S   N+LI G     
Sbjct: 416 EHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHS 475

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K+D A+++       G S T  +Y  ++ GL++ +R ++    + +ML +G   D+  Y 
Sbjct: 476 KLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYS 535

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPD---------------------------RE- 618
            LI  + E N +      ++  +  G  PD                           R+ 
Sbjct: 536 TLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQK 595

Query: 619 ------TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
                 T  +++ G        + S     ++ D    D   YNI + GL   G  + A 
Sbjct: 596 KCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAV 655

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
             LD  L +G++P A T  +LV
Sbjct: 656 GFLDDALVRGFLPTAITWNILV 677



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 172/379 (45%), Gaps = 17/379 (4%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP--NSRTFEIVIKG 246
           VY+EMV  G+ P+V T N +L  L +   +E   + +  M K   C   N R++ I +KG
Sbjct: 311 VYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGK---CSLRNVRSYNIFLKG 367

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RALDLM 304
           L  N +VDD++     ++D  ++ + + Y  ++  LC    +  A+++ +    R   + 
Sbjct: 368 LFENGKVDDAMM----LWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMD 423

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            DE  Y  LIN LC+  RLD+A+ ++E M   G      V   ++ G  +  K D +V  
Sbjct: 424 VDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKV 483

Query: 365 LED----KCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCE 419
             +     C      +N L+     A +F  A  C+ E +      D  +++  I  L E
Sbjct: 484 FREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYE 543

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           +  +  A  L  + + +   PD   Y+  +   C     EDAL+++  +  +  V + ++
Sbjct: 544 SNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVT 602

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           ++ ++EG  +V     A +++  + ++       S+NI + GLC   +V  A+     A 
Sbjct: 603 HNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDAL 662

Query: 540 SSGTSYTTSTYTKIMLGLV 558
             G   T  T+  ++  ++
Sbjct: 663 VRGFLPTAITWNILVRAVI 681



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 124/255 (48%), Gaps = 2/255 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            Y  +I  L   G ++E +G+ + M K            L+  FV H +++ A++V   M
Sbjct: 428 AYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           +  G  L+V  +N+++  ++  +R F +      EM++ G  P++ T + L+  L+E+N 
Sbjct: 488 SGKGCSLTVVSYNILINGLLRAER-FREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNM 546

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +++AL  + +    G  P+   + IVI  L ++ +V+D++ +   +      + L  +  
Sbjct: 547 MDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNT 605

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           I+    +    E A +++  +   +L PD ++Y   +  LC   R+ DA   L+D +V G
Sbjct: 606 IMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRG 665

Query: 338 LTPTDDVFVDIVRGL 352
             PT   +  +VR +
Sbjct: 666 FLPTAITWNILVRAV 680


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 236/554 (42%), Gaps = 44/554 (7%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           K   AD +     M   G+ P+  T N LL        +  A     RM + G  P   T
Sbjct: 221 KGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPT 280

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++        +  +  ++  M   G + +L  Y  +   LC+  K++EA RL   M 
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEME 340

Query: 300 ALDL-MPDELTYEELINCLCENLRLD-DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            L   +PD +TY  L++  C   R   DA  +LE+M   G+ PT      +V+ LC+ GK
Sbjct: 341 RLSTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
            +E++  LE       +P    +N L++  C AG    A  ++++M  + +  D  + N 
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            +  LC+ +    A ELL        VPD  +Y   +    K  N E ALR++ Q+  + 
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L+    +Y+ L++GLC++E++ EA++    + + G     +++NI+I+  C    ++ A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           R  +    +       T   +M GL    +    L +    + +G  +DV  Y  LIQSM
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSM 639

Query: 593 SEQNKLKDCALFFNVMVKAGLVPD----------------RETMLSLLHGLADGSQLHLV 636
            +   +     FF+ M   GL PD                 E   ++LH LAD  +L   
Sbjct: 640 CKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699

Query: 637 ------------------SSGINKLVSDSEVLDSSM--YNILINGLWKEGLTSQASYLLD 676
                               G  +  S  +  D+++  Y   +NGL   G   +A  +LD
Sbjct: 700 FACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLD 759

Query: 677 LMLGKGWVPDATTH 690
            M+ KG   D++T+
Sbjct: 760 EMMQKGMPVDSSTY 773



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 234/517 (45%), Gaps = 22/517 (4%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRI--ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           + G+ P++   N +L  L  +     +++LD FR + +    PN  TF +++    +   
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + D+++ L  M   G+  +   Y  ++   CR+  L EA  L   M+   + P + TY  
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++       +  A  ++E M   G  P    +  +  GLC+ GK DE+   L+D+   +
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFR-LKDEMERL 342

Query: 373 TSP------HNALLECCCNAGKFFLAKC------ILEKMADRKIADC-DSWNIPIRWLCE 419
           ++       +N L++ C      F  +C      +LE+M D+ +     + NI ++ LC+
Sbjct: 343 STALPDVVTYNTLVDAC------FKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCK 396

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++ +A   L ++    + PD  TY+  +   CK  N   A  +  ++  + L +D+ +
Sbjct: 397 EGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFT 456

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            + ++  LC++++  +A E+     + G      S+  ++         + A+RL     
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                 + STY  ++ GL +++R K+ +  L +++ +G   D   Y I+I +  ++  L+
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLE 576

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +   F N MV+    PD  T  +L++GL    +L          V   + +D   YN LI
Sbjct: 577 NAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLI 636

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             + K G    A +  D M  KG  PDA T+ +++ +
Sbjct: 637 QSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 137/594 (23%), Positives = 241/594 (40%), Gaps = 90/594 (15%)

Query: 143 NHYRVN-------------GAMRVLVNMNSGGFKLSVD--VFNVVLGAIVEEKRGFADFV 187
           NHY  N              A+  L  M   GF LS D   +N +L A    K    +  
Sbjct: 207 NHYTFNLLVHTHCSKGTLADALATLSTMQ--GFGLSPDAVTYNTLLNAHCR-KGMLGEAR 263

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +   M + GI P   T N L+        I+ A      M   G  P+ RT+ ++  GL
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGL 323

Query: 248 IANSRVD------------------------------------DSVSILGEMFDLGIQLE 271
               +VD                                    D++ +L EM D G++  
Sbjct: 324 CQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           L  +  ++  LC+E KLEEA+   + +    L PD +TY  LI+  C+   +  A  +++
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAG 387
           +M+  GL         ++  LC++ +++++   L      G+V     +  ++       
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 388 KFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  + ++M +RK I    ++N  I+ LC  E +++A + L  +V   +VPD  TY+
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYN 563

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             +   CK  + E+A R   ++   S   D ++ + L+ GLC   K+ +A+++F    + 
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G  +   ++N LI  +C +  VD A+         G      TY  ++  L +  R+++ 
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMS----------------EQNKLKDCALFFNVMVK 610
             +L + L +   L     C L++  S                   K +D AL       
Sbjct: 684 HNMLHK-LADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL------- 735

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
                  ET +  L+GL  G QL    + +++++     +DSS Y  L+ GL K
Sbjct: 736 -------ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 189/424 (44%), Gaps = 12/424 (2%)

Query: 77  SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS 136
           S AL++ + +   K  + T  T+  ++  L   G +EE  G  + + +E          +
Sbjct: 366 SDALRLLEEMR-DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT 424

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ ++     V  A  ++  M   G K+     N VL  + + KR + D   +     + 
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKR-YEDAEELLHSPPQR 483

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G VP+  +   ++   F+    E AL  + +M ++   P+  T+  +IKGL    R+ ++
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +  L E+ + G+  + + Y  II   C+E  LE A R    M      PD +T   L+N 
Sbjct: 544 IDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNG 603

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC + +LD A  + E  +  G       +  +++ +C+VG  D +++F +D       P 
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPI-RWLCENEEIRKAYELL 430
              +N +L     AG+   A  +L K+AD  K++   S+  P+ +    +E   K +E  
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ--SFACPLLKPSSADEADVKEHEGK 721

Query: 431 GRMVVSSVVPDCA--TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
                S    D A  TY   + G C     ++A  V  ++  + + +DS +Y  L+EGL 
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLI 781

Query: 489 QVEK 492
           + +K
Sbjct: 782 KRQK 785



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/513 (22%), Positives = 203/513 (39%), Gaps = 33/513 (6%)

Query: 74  NDLSSALKIFKWVSIQKR---------FQHTADTYCKMILKLGLAGNVEEMEGLCQNM-- 122
           N L SA     W+    +         F+    TY  + + L  AG V+E   L   M  
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341

Query: 123 VKERYPNV--REALISLVFSFVNHYRVNG-AMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           +    P+V     L+   F     +R +  A+R+L  M   G K ++   N+V+ ++ +E
Sbjct: 342 LSTALPDVVTYNTLVDACFK----WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            +   + +   +++ + G+ P+V T N L++   +   +  A      M  KG   ++ T
Sbjct: 398 GK-LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFT 456

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
              V+  L    R +D+  +L      G   +   Y  ++    +E   E A+RL+  M 
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
              L+P   TY  LI  LC   RL +A D L +++  GL P +  +  I+   C+ G  +
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLE 576

Query: 360 ESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPI 414
            +  F          P     N L+   C  GK   A  + E   ++ K  D  ++N  I
Sbjct: 577 NAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLI 636

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS----- 469
           + +C+  ++  A      M V  + PD  TY+  +    +    E+A  +  +++     
Sbjct: 637 QSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKL 696

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           +QS     +  S   E   +  +     E       N         N    GLC   ++ 
Sbjct: 697 SQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLN----GLCTGGQLK 752

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           +A  +       G    +STY  +M GL+K Q+
Sbjct: 753 EAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/514 (20%), Positives = 199/514 (38%), Gaps = 76/514 (14%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV--DDSVSILGEMFDLGIQLELSFYTCII 279
           L   RR  ++G  P+ +    V+  L  +       S+ +   + +L +      +  ++
Sbjct: 158 LHSLRR--RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLV 215

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              C +  L +A+     M+   L PD +TY  L+N  C    L +A  +L  M   G+ 
Sbjct: 216 HTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIA 275

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           PT   +  +V     +G   ++   +E    Y   P                        
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP------------------------ 311

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM-VVSSVVPDCATYSAFVLGKCKLCNY 458
                 D  ++N+    LC+  ++ +A+ L   M  +S+ +PD  TY+  V    K    
Sbjct: 312 ------DLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCS 365

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            DALR+  ++  + +    ++++ +V+ LC+  K+ EA+     +++ G +    ++N L
Sbjct: 366 SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I   C    V KA  L       G    T T   ++  L K++R +D   +L      G 
Sbjct: 426 IDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGF 485

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D  +Y  ++ +  ++   +     ++ M++  L+P   T                   
Sbjct: 486 VPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST------------------- 526

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
                           YN LI GL +     +A   L+ ++ KG VPD TT+ +++ +  
Sbjct: 527 ----------------YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC 570

Query: 699 GEEIDSRRFAF-----DSSSFPDSVS-DILAEGL 726
            E      F F     ++S  PD V+ + L  GL
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/551 (22%), Positives = 246/551 (44%), Gaps = 42/551 (7%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R FA    ++ +M+++G+  +       +    E+  ++ A     RM  +G   ++  +
Sbjct: 200 RQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPY 259

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            +++ GL  N RV ++V +   M ++G+  +   Y  ++   CR  +LE A+R+   M  
Sbjct: 260 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIR 319

Query: 301 LDLMPDE-----------------------------------LTYEELINCLCENLRLDD 325
           L  +P E                                     Y  LI+ LC+N R DD
Sbjct: 320 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDD 379

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---NFLEDKCGYVT-SPHNALLE 381
           A+ + ++M   GL P +  +  ++  LC+ G  ++++   + + DK   VT  P+N+L+ 
Sbjct: 380 ADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLIN 439

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G    A+ +L  M    +    +   P I  LC N ++    EL   M    +  
Sbjct: 440 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAW 499

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++A + G CK    ++A R+F ++   +++ + ++++ ++EG C V  I +A +++
Sbjct: 500 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 559

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M + G    + ++  LI GLC+   V KA    +   +S       + T ++ G  + 
Sbjct: 560 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 619

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILI-QSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            R  +   +  +M V G  LD+ ++ I++  ++ + +K K C L F  M + G+ PD   
Sbjct: 620 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL-FREMKEQGVKPDDIF 678

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              ++  L+    +    +  +++V D    ++  + +LIN L K G    A  L   ML
Sbjct: 679 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 738

Query: 680 GKGWVPDATTH 690
               +P+  T+
Sbjct: 739 AGNVLPNKFTY 749



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 240/586 (40%), Gaps = 32/586 (5%)

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL-VNMNSGGFKLSVDVFNVVL 173
           M GLC+NM                       RV  A+ V  V +N G     V    +V 
Sbjct: 263 MYGLCKNM-----------------------RVQEAVEVKNVMVNIGVTADEVTYRTLVY 299

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G    E+   A  + +  +M++ G VP+    +++++ L +   +E A     ++   G 
Sbjct: 300 GFCRMEELEMA--LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN   +  +I  L  N R DD+  +  EM   G++     Y  +I  LC+   +E+A+ 
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LF  MR   +      Y  LIN  C+   LD A  +L  M+  GLTPT   +  ++ GLC
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 477

Query: 354 EVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
             G     +       E    +      AL+   C   K   A  + +KM D  +   + 
Sbjct: 478 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 537

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I   C    IRKA++L  +MV   + PD  TY + + G C       A      +
Sbjct: 538 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 597

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                VL++ S + L+ G  +  + TE   ++  M+  G  L   SF I++Y        
Sbjct: 598 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 657

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +K+  L       G       YT ++  L K +     L    QM+V+G + +   + +L
Sbjct: 658 EKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVL 717

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I ++ +   L    L    M+   ++P++ T    L   A    +   +  ++  +    
Sbjct: 718 INNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME-KAKDLHSAMLQGH 776

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +     +NILI GL K G   +A  L+  +   G+ PD  ++  ++
Sbjct: 777 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 238/544 (43%), Gaps = 49/544 (9%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADF 186
           PNV  A  +L+     + R + A R+   M   G + +   + +++ A+   KRG   D 
Sbjct: 359 PNVF-AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC--KRGMIEDA 415

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M   GI   V   N L+    +   ++ A      M K+G  P + ++  +I G
Sbjct: 416 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 475

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  N  +   + +  EM + GI      +T +I   C++ K++EA RLF  M   +++P+
Sbjct: 476 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 535

Query: 307 ELTYEELIN--CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC---EVGKFDES 361
           E+T+  +I   CL  N+R   A  + + M+ +GL P +  +  ++ GLC    V K +E 
Sbjct: 536 EVTFNVMIEGYCLVGNIR--KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 593

Query: 362 VNFLEDKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
           V  LE+    + +    ALL      G+F     + ++MA R +  D  S+ I +    +
Sbjct: 594 VADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 653

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             +  K+  L   M    V PD   Y+  +    K  N   AL  + Q+       ++++
Sbjct: 654 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 713

Query: 480 YSKLVEGLCQVEKITEAVEVFC----------------C----------MSK-------- 505
           ++ L+  LC+   +  A E+ C                C          M K        
Sbjct: 714 HTVLINNLCKSGYLGSA-ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 506 -NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G   S  SFNILI GLC   K+ +AI L S    SG S    +Y+ I+  L K+    
Sbjct: 773 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 832

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
               +  +ML +G   DV AY I I+  +   +       +  M+++G+ P+ +T  +LL
Sbjct: 833 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 892

Query: 625 HGLA 628
            G++
Sbjct: 893 SGIS 896



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 210/483 (43%), Gaps = 21/483 (4%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G   N  T   ++  L+   +   +  +  +M   G+ L+   YT  I   C    L+ A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L   M +  +    + Y  L+  LC+N+R+ +A ++   M+ IG+T  +  +  +V G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 352 LCEVGKFDESVNFLED--KCGYVTSPHN-----------ALLECCCNAGKFFLAKCILEK 398
            C + + + ++    D  + G+V S  N            L+E      + F   C L  
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE------EAFSLACKLGD 354

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
           +    + +  ++N  I  LC+NE    A  L   M    + P+  TY+  +   CK    
Sbjct: 355 LG--MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 412

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           EDAL +F ++  + + +    Y+ L+ G C+   +  A  +   M K G + +++S++ L
Sbjct: 413 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 472

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I GLC    +   + L       G ++   T+T ++ G  K ++  +   +  +M+    
Sbjct: 473 IAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 532

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             +   + ++I+       ++     ++ MV+ GL PD  T  SL+ GL   S +   + 
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 592

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            +  L +   VL++     L+ G ++EG  ++  +L D M  +G   D  +  ++V +++
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 652

Query: 699 GEE 701
            + 
Sbjct: 653 KQH 655



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/485 (20%), Positives = 205/485 (42%), Gaps = 59/485 (12%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G+++   GL   MVKE       +   L+     +  ++  M +   
Sbjct: 439 NGYCKQ-------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 491

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   F  ++    ++K+   +   ++ +M+ + ++PN  T N ++E      
Sbjct: 492 MAERGIAWNNYTFTALINGFCKDKK-MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 550

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS------------------------- 251
            I  A   + +M + G  P++ T+  +I GL   S                         
Sbjct: 551 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 610

Query: 252 ----------RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                     R  ++  +  EM   G++L+L  +T I+    +++  E++  LF+ M+  
Sbjct: 611 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 670

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + PD++ Y  +I+ L +   +  A +  + M+V G +P       ++  LC+ G    +
Sbjct: 671 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 730

Query: 362 V---------NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
                     N L +K  Y     N  L+     G    AK +   M    +A   S+NI
Sbjct: 731 ELLCKEMLAGNVLPNKFTY-----NCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNI 785

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I+ LC+  +I++A +L+ ++  S   PDC +YS  +   CK+ +   A  ++ ++  + 
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 845

Query: 473 LVLDSISYSKLVEGLCQVEKITE-AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
           L  D ++Y+  +   C V   ++ A+ ++  M ++G   +  ++  L+ G+ +M    +A
Sbjct: 846 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQA 904

Query: 532 IRLRS 536
           + L +
Sbjct: 905 LLLTT 909



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 35/303 (11%)

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +LG  + S +  +  T S  +    K+  +  A  +F ++    + LD   Y+  +   C
Sbjct: 173 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 232

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   +  A  +   M   G   S+  +N+L+YGLC   +V +A+ ++++  + G +    
Sbjct: 233 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 292

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQM-----------------------LVE--------- 576
           TY  ++ G  +++  +  L +   M                       LVE         
Sbjct: 293 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 352

Query: 577 ---GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              G   +V AY  LI  + +  +  D    F  M   GL P+  T   L+H L     +
Sbjct: 353 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 412

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  +K+      +    YN LING  K+G   +A  LL  M+ +G  P A ++  L
Sbjct: 413 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 472

Query: 694 VGS 696
           +  
Sbjct: 473 IAG 475


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 226/492 (45%), Gaps = 38/492 (7%)

Query: 105 KLGLAGNVEEMEGLCQNMVKE-RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
           KL   G +EE     + M+ +   P+V  A  SL+  F    +   A R++  + + G  
Sbjct: 115 KLVRNGELEEGLKFLERMIYQGDIPDVI-ACTSLIRGFCRSGKTKKATRIMEILENSGAV 173

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
             V  +NV++G     K G  D      E  +  + P+V T N +L  L ++ +++ A++
Sbjct: 174 PDVITYNVLIGGYC--KSGEIDKALEVLE--RMSVAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              R  ++ C P+  T+ I+I+    +S V  ++ +L EM   G + ++  Y  +I  +C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           +E +L+EAI+    M +    P+ +T+  ++  +C   R  DA  +L DM+  G +P+  
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPS-- 347

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
                      V  F+  +NFL                  C       A  +LEKM    
Sbjct: 348 -----------VVTFNILINFL------------------CRKRLLGRAIDVLEKMPKHG 378

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + +  S+N  +   C+ +++ +A E L  MV     PD  TY+  +   CK    + A+
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAV 438

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  Q+S++      I+Y+ +++GL +V K   AVE+   M + G      +++ L+ GL
Sbjct: 439 EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               KVD+AI++           +  TY  IMLGL K Q+    +  LA M+ +GC    
Sbjct: 499 GREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTE 558

Query: 583 EAYCILIQSMSE 594
             Y ILI+ +++
Sbjct: 559 ATYTILIEGIAD 570



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 223/509 (43%), Gaps = 43/509 (8%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + M+  G +P+V     L+     + + + A      +   G  P+  T+ ++I G   +
Sbjct: 130 ERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKS 189

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             +D ++ +L  M    +  ++  Y  I+  LC   KL+EA+ +       +  PD +TY
Sbjct: 190 GEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITY 246

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI   C +  +  A  +L++M   G  P    +  ++ G+C+ G+ DE++ FL +   
Sbjct: 247 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 306

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
           Y   P    HN +L   C+ G++  A+ +L  M  +  +    ++NI I +LC       
Sbjct: 307 YGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKR---- 362

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
              LLGR                            A+ V  ++     V +S+SY+ L+ 
Sbjct: 363 ---LLGR----------------------------AIDVLEKMPKHGCVPNSLSYNPLLH 391

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G CQ +K+  A+E    M   GC     ++N L+  LC   KVD A+ + +   S G S 
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  ++ GL K+ + +  + +L +M  +G   D+  Y  L++ +  + K+ +    F
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + M    + P   T  +++ GL    Q       +  +V        + Y ILI G+  E
Sbjct: 512 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADE 571

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL  +A  LL+ +  +G+V  ++   ++V
Sbjct: 572 GLAEEALELLNELCSRGFVKKSSAEQVVV 600



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 160/351 (45%), Gaps = 8/351 (2%)

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-K 403
           +R L   G+ +E + FLE        P      +L+   C +GK   A  I+E + +   
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + D  ++N+ I   C++ EI KA E+L RM   SV PD  TY+  +   C     ++A+ 
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           V  +   +    D I+Y+ L+E  C    + +A+++   M K GC     ++N+LI G+C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              ++D+AI+  +   S G      T+  I+  +    R  D   +L+ ML +GC+  V 
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            + ILI  +  +  L         M K G VP+  +   LLHG     ++      +  +
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           VS     D   YN L+  L K+G    A  +L+ +  KG  P   T+  ++
Sbjct: 410 VSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 174/379 (45%), Gaps = 10/379 (2%)

Query: 81  KIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVEE-MEGLCQNMVKERYPNVREALISL 137
           +I K + + +R     D  TY  ++  L  +G ++E ME L + + +E YP+V    I L
Sbjct: 191 EIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTI-L 249

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           + +  N   V  AM++L  M   G K  V  +NV++  I +E R   + +     M   G
Sbjct: 250 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR-LDEAIKFLNNMPSYG 308

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
             PNV T N +L  +  T R   A      M +KGC P+  TF I+I  L     +  ++
Sbjct: 309 CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +L +M   G       Y  ++   C+E K++ AI   ++M +    PD +TY  L+  L
Sbjct: 369 DVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 428

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
           C++ ++D A +IL  +   G +P    +  ++ GL +VGK + +V  LE+       P  
Sbjct: 429 CKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDI 488

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGR 432
             ++ LL      GK   A  I   M    I     ++N  +  LC+ ++  +A + L  
Sbjct: 489 ITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 548

Query: 433 MVVSSVVPDCATYSAFVLG 451
           MV     P  ATY+  + G
Sbjct: 549 MVEKGCKPTEATYTILIEG 567



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 40/254 (15%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E+ L+   ++  Q  + D I+ + L+ G C+  K  +A  +   +  +G      ++N+L
Sbjct: 123 EEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVL 182

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C   ++DKA+ +         +    TY  I+  L    + K+ + VL + L   C
Sbjct: 183 IGGYCKSGEIDKALEVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQREC 239

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV  Y ILI++    + +       + M K G  PD  T                   
Sbjct: 240 YPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT------------------- 280

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-- 696
                           YN+LING+ KEG   +A   L+ M   G  P+  TH +++ S  
Sbjct: 281 ----------------YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324

Query: 697 SVGEEIDSRRFAFD 710
           S G  +D+ R   D
Sbjct: 325 STGRWMDAERLLSD 338


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 235/522 (45%), Gaps = 52/522 (9%)

Query: 49  DYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTY-CKMILKLG 107
           + EA +     NL P+ + RVL    D+  +L  F+WV+   R +   + + C  +L+  
Sbjct: 20  EAEAALAKYSRNLVPNTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLR-- 77

Query: 108 LAGNVEEMEGLCQNMVKER-----YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
                         +VK R     Y   R+ L+        H   N    +  N   GGF
Sbjct: 78  -------------TLVKARRHHQAYQIFRDELLG------QHCDTN---HITYNTLIGGF 115

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
             + D+           +R F     +  EM + G  P+V T + +++ L  T  +  A+
Sbjct: 116 CKAGDM-----------ERAFQ----LLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAM 160

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             FR   +  C P+S  F I++ GL   +++ ++  ++ EM + GI  ++  Y  +I  L
Sbjct: 161 QYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGL 218

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C+  ++EEA +L + M    + P+ +TY  LI   C+      A+ ++E MI  G  P  
Sbjct: 219 CKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV 278

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             F  ++ G C+  K D++   L      + +P    +N L+   C+AG+   A  +L +
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M  R I  D  ++N  I   C N +I +A+++   MV   V+PD  +Y    +   K   
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSER 398

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           +++A  +   +     + +  +++ L+EGLC   ++ EA  +   M + GC  ++S++ +
Sbjct: 399 FDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEV 458

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           L+ GLC   +VD A  +  +  S G     S+   I+  L +
Sbjct: 459 LVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAR 500



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/488 (22%), Positives = 207/488 (42%), Gaps = 51/488 (10%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFR-RMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + N  T N LL  L +  R   A   FR  +  + C  N  T+  +I G      ++ + 
Sbjct: 66  IHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAF 125

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +L EM + G   ++  ++ I+  LC    L  A++ F+   +++  PD + +  L++ L
Sbjct: 126 QLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGL 183

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C+  +L +A  ++E+M   G+ P    +  ++ GLC+  + +E                 
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEE----------------- 226

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
                         A+ +LE M  RK+  +  ++N  I   C+      A++L+ RM+ S
Sbjct: 227 --------------ARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQS 272

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              PD  T+++ + G C+    + A  V   +       + ++Y+ L+ GLC   +  EA
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            E+   M   G      ++N LI   C   ++++A ++++L    G      +Y  + + 
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L+K +R  +   +L  M   G   ++  +  L++ +    +L +      VM + G  P 
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452

Query: 617 RETMLSLLHGLADGSQLH--------LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
             T   L+ GL    ++         +VS GI  LVS S          +++ L +EG  
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSS--------GTIVHTLAREGKQ 504

Query: 669 SQASYLLD 676
             A +  D
Sbjct: 505 DLALHYFD 512



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/419 (21%), Positives = 178/419 (42%), Gaps = 33/419 (7%)

Query: 277 CIIPMLCRENKLEEAIRLFK-MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           C++  L +  +  +A ++F+  +       + +TY  LI   C+   ++ A  +L +M  
Sbjct: 74  CLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKE 133

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            G +P       IV+ LC  G    ++ +  +            +EC             
Sbjct: 134 RGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES-----------VECA------------ 170

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                     D   +NI +  LC+  ++ +A +++  M    +VPD  TY++ + G CK 
Sbjct: 171 ---------PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E+A ++   +  + +  + ++Y+ L+ G C+      A ++   M ++G      +F
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI G C   K+DKA  +  L      +    TY  ++ GL    RA +   +L++M  
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   D+  Y  LI       +++      N+MV+ G++PD  +  +L   L    +   
Sbjct: 342 RGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDE 401

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             + ++ +     + +   +N L+ GL       +A +LL +M   G  P A+T+ +LV
Sbjct: 402 AFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 147/324 (45%), Gaps = 8/324 (2%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I   C+  ++ +A++LL  M      PD  T+S+ V   C   N   A++ FR+ 
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE- 165

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            +     DS+ ++ LV GLC+  +++EA ++   MS+ G      ++N LI GLC   ++
Sbjct: 166 -SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++A +L              TY  ++ G  K         ++ +M+  G   DV  +  L
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I    +++K+       ++M K    P+  T   L+ GL D  + +     ++++     
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA 708
           + D   YN LI    +     QA  + +LM+ +G +PD  ++  L  + +  E     FA
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404

Query: 709 -----FDSSSFPDSVS-DILAEGL 726
                FD+ + P+  + + L EGL
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGL 428



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 3/280 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE-RYPNVREALISLVFSFVNHYR 146
           ++++ +    TY  +I      G       L + M++   +P+V     SL+  F    +
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV-VTFNSLISGFCQKSK 293

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++ A  VL  M  G    ++  +NV++  + +  R   +   +  EM   GI+P++ T N
Sbjct: 294 IDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRA-NEACELLSEMDGRGILPDIITYN 352

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+ +     +IE A      M ++G  P+  ++  +   L+ + R D++ ++L  MFD 
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G    L  +  ++  LC   +L+EA  L  +MR +   P   TYE L+  LC+  R+DDA
Sbjct: 413 GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            ++L  M+  G+ P       IV  L   GK D ++++ +
Sbjct: 473 KEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFD 512


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 214/483 (44%), Gaps = 5/483 (1%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           KEMV  G     +TL  L+      N+   A D F +     C P    F  +I  L+ +
Sbjct: 19  KEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNS 78

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              + +  +  ++   G QL+   Y  +I    R  +L+ A+ +F+ M+     PDE TY
Sbjct: 79  GEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTY 138

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--K 368
             L+N L +  R+ +A    + M+  GLTP    +  ++    +VG+ D ++    +  +
Sbjct: 139 GFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRK 425
            G+  S   +N LL+  C+AG+   A+ +  KM  D    D  +++  +  L ++  + +
Sbjct: 199 RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEE 258

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A+++   MV   V  D   Y++ +    K  N +   ++ +++S +    D+ S++ +++
Sbjct: 259 AHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMD 318

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            L +  K   A EVF  M ++GC     S+NILI          +A ++      +G   
Sbjct: 319 ALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIP 378

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            T TY  ++  L    +  +   VL +M   GC  DV  Y  L+  + ++ + +  A  F
Sbjct: 379 ETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLF 438

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M   G+ PD  +    + GLA   +L         + +    +D +MY ILI    + 
Sbjct: 439 QQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRA 498

Query: 666 GLT 668
           G T
Sbjct: 499 GDT 501



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 206/457 (45%), Gaps = 38/457 (8%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE-MEGLCQNMVK 124
           LI +L N+ +   A  ++K + +QK  Q     Y  +I   G +G ++  ME   +  +K
Sbjct: 71  LIDILVNSGEFERAELVYKKL-VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
              P+       LV +     RV  A      M   G   ++  +N+++ A    K G  
Sbjct: 130 GSEPD-EYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF--RKVGQL 186

Query: 185 DFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           D    ++ EM + G  P+V T N LL+ L    R+ +A   F +M   GC P+S T+  +
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           + GL  + RV+++  +  EM D G+ ++L  Y  ++  L +   ++   +L K M     
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD  ++  +++ L +  + D A ++   M+  G  P      D++              
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP------DLI-------------- 346

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEE 422
                       +N L++     G    A+ +LE+M +   I +  ++N  I WL  + +
Sbjct: 347 -----------SYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A+ +L  M  +   PD  TY+  +    K    + A R+F+Q+  + +  D++SY+ 
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            ++GL   +++ EA+ +F  M   GC +  + + ILI
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 186/447 (41%), Gaps = 5/447 (1%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D   ++L EM   G  L  +    +I    R NK  +A  LF    +    P    + +
Sbjct: 11  LDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTK 70

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ L  +   + A  + + ++  G       +  ++R     G+ D ++    +     
Sbjct: 71  LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           + P    +  L+     AG+   A+   + M +R +  +  ++N+ +    +  ++  A 
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L   M      P   TY+  +   C       A ++F +++      DS +YS LV GL
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            +  ++ EA +VF  M   G ++   ++N L+  L     +D+  +L       G     
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            ++  IM  L K  +      V A+M+  GC  D+ +Y ILI S +              
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV+AG +P+ +T  SL+H LA   Q+    + + ++ +     D   YN L++ L K G 
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
             +A+ L   M  KG  PD  ++ + +
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRI 457


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 227/507 (44%), Gaps = 34/507 (6%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV+ G+ PNV T N L+  L    R+E A+     M   GC PN+ T+  ++        
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 253 VDDSVSILGEMFDLG-IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +D +  ++  M + G  +  L  +  ++  LC+  ++E A ++F  M    L PD ++Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---- 367
            L++  C+   L ++  +  +M   GL P    F  ++   C+ G  +++V  +      
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 368 --KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS---WNIPIRWLCENEE 422
             +   VT    AL++  C  G  FL   +L     RK     S   +N  I   C+   
Sbjct: 181 GLRMNEVT--FTALIDGFCKKG--FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A EL+  M    V PD  TYS  + G CK+ N + A ++ +++  + ++ D+I+YS 
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ GLC+ +++ +A E+F  M + G      ++  LI G C    V+KA+ L       G
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY+ ++ GL K  R K+   +L ++  E    D   Y  L+   S+        
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA------- 409

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
                        + +++++LL G      +         ++  +  LD S+Y+ILI+G 
Sbjct: 410 -------------EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 456

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATT 689
            + G   +A      ML  G+ P++T+
Sbjct: 457 CRGGNVRKALSFHKQMLRSGFSPNSTS 483



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/522 (21%), Positives = 222/522 (42%), Gaps = 54/522 (10%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M + G  PN  T+ I+++ L A  R++++V ++G+M   G       Y  ++   CR  +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 288 LEEAIRLFKMMRAL-DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           L+ A R+  +MR   +  P+ +T+  ++N LC+  R++ A  + ++M+  GL P    + 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IA 405
            ++ G C+VG   ES+                                +  +M  R  + 
Sbjct: 121 TLLSGYCKVGCLHESL-------------------------------AVFSEMTQRGLVP 149

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++   I   C+   + +A  L+ +M    +  +  T++A + G CK    +DAL   
Sbjct: 150 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 209

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++    +    + Y+ L+ G C++ ++  A E+   M          +++ +I G C +
Sbjct: 210 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 269

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             +D A +L       G      TY+ ++ GL + +R  D   +   ML  G   D   Y
Sbjct: 270 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 329

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    ++  ++      + M++ G++PD  T   L++GL+  ++       + KL  
Sbjct: 330 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 389

Query: 646 DSEVLDSSMYN---------------ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           +  V D+  Y+                L+ G   +GL  +A  +   ML + W  D + +
Sbjct: 390 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 449

Query: 691 GLLV-----GSSVGEEIDSRRFAFDSSSFPDSVSDI-LAEGL 726
            +L+     G +V + +   +    S   P+S S I L  GL
Sbjct: 450 SILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 241/588 (40%), Gaps = 69/588 (11%)

Query: 57  LRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           +RH ++P+      L+R L     L  A+ +   +         A TY  ++     AG 
Sbjct: 2   VRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNAVTYNTLVAAFCRAGE 60

Query: 112 VEEMEGLCQNMVKERYPNVREALI---SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           ++  E +   M +E   N +  L+   S+V       R+ GA +V   M   G    V  
Sbjct: 61  LDGAERVVSLMREE--GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118

Query: 169 FNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +N +L      K G   + + V+ EM + G+VP+V T   L+    +   +E A+    +
Sbjct: 119 YNTLLSGYC--KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M ++G   N  TF  +I G      +DD++  + EM   GIQ  +  Y  +I   C+  +
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A  L + M A  + PD +TY  +I+  C+   LD A  + + M+  G+ P    +  
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           ++RGLCE  + +++    E+       P                              D 
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQP------------------------------DE 326

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   I   C+   + KA  L   M+   V+PD  TYS  + G  K    ++A R+  +
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386

Query: 468 VSAQSLVLDSISYS---------------KLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           +  +  V D+I Y                 L++G C    + EA +V+  M      L  
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 446

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA- 571
           S ++ILI+G C    V KA+        SG S  +++   ++ GL      ++ +VV A 
Sbjct: 447 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF-----EEGMVVEAD 501

Query: 572 ---QMLVEGCAL-DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              Q L+  C L D EA   LI    ++  +         M + GL+P
Sbjct: 502 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 207/436 (47%), Gaps = 12/436 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +++EM   G++P++ + N  ++ L +  R + A + F  M  KG  PN  T+ I++ G  
Sbjct: 208 MFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYA 267

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                 D +S    M   GI      +T +I    +   ++EA+ +   M+   L PD  
Sbjct: 268 TEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVF 327

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-ED 367
           TY  LI+ LC   RL DA D    MI  G+ P   V+  +++G C  G   ++   + E 
Sbjct: 328 TYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEM 387

Query: 368 KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEE 422
               +  P+    N+++   C  G+   A  I + + D  + +D   +N  I   C   E
Sbjct: 388 MNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGE 447

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + KA+ +L  M+ + + PD  TY+  V G  K    +D L +FR++S + +   +++Y+ 
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI 507

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +++GL +  +   A ++   M   G ++S  ++NI++ GLC     D+AI +     +  
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567

Query: 543 TSYTTSTYTKIMLGLVKLQR---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             +  +T   ++  +  +QR   AKDL   ++     G   +   Y I+I+++ ++  ++
Sbjct: 568 VKFNITTLNTMINSMYTVQRREEAKDLFSAISD---SGLVPNASTYGIMIRNLLKEGSVE 624

Query: 600 DCALFFNVMVKAGLVP 615
           +    F+ M K+G  P
Sbjct: 625 EADNMFSSMEKSGCAP 640



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 124/545 (22%), Positives = 231/545 (42%), Gaps = 49/545 (8%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G K      N VL  +   KR       + + M + G VP+  +   +L+ L + NR + 
Sbjct: 38  GLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQ 97

Query: 221 ALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           ALD  R M K+   C P+  T+  VI G     ++  + ++  EM   G   ++  +  I
Sbjct: 98  ALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSI 157

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+   ++ A  L + M    + P+++TY  +I+      R ++A  +  +M   GL
Sbjct: 158 INALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGL 217

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
            P    +   +  LC+ G+  E+             P    +  LL      G F     
Sbjct: 218 IPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMS 277

Query: 395 ILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
               M  D  +A+C  + I I    +   + +A  +L  M    + PD  TYS  +   C
Sbjct: 278 FFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC 337

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS- 512
           ++    DA+  F Q+    +  +++ Y  L++G C    + +A E+   M  NG    + 
Sbjct: 338 RMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNI 397

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           + FN +++ +C   +V  A  +  L    G                  +R+    +++  
Sbjct: 398 AFFNSIVHSICKEGRVMDAHHIFDLVKDIG------------------ERSD---IIMFN 436

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            L++G       YC L+  M +   + D       M+ AG+ PD  T  +L++G     +
Sbjct: 437 TLIDG-------YC-LVGEMGKAFSVLD------AMISAGIGPDTFTYNTLVNGYFKSGR 482

Query: 633 LHLVSSGIN--KLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              +  G+N  + +SD ++  +++ YNI+++GL++ G T  A  +L  M+G G      T
Sbjct: 483 ---IDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPT 539

Query: 690 HGLLV 694
           + +++
Sbjct: 540 YNIIL 544



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 119/527 (22%), Positives = 226/527 (42%), Gaps = 9/527 (1%)

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           V  +N V+    +E +       +Y EM++ G VP+V T N ++  L +   +++A    
Sbjct: 116 VVTYNTVIHGFFKEGK-IGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLL 174

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           R+M   G  PN  T+  +I G     R +++  +  EM   G+  ++  +   +  LC+ 
Sbjct: 175 RQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKH 234

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            + +EA  +F  M A    P+ +TY  L++         D       M   G+     VF
Sbjct: 235 GRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF 294

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMAD 401
             ++    + G  DE++  L +  G   SP    ++ L+   C  G+   A     +M  
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV-PDCATYSAFVLGKCKLCNYE 459
             +  +   ++  I+  C + ++ KA EL+  M+ + +  P+ A +++ V   CK     
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVM 414

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           DA  +F  V       D I ++ L++G C V ++ +A  V   M   G    + ++N L+
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G     ++D  + L           TT TY  I+ GL +  R      +L +M+  G  
Sbjct: 475 NGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTT 534

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           + +  Y I+++ +   N   +  + F  +    +  +  T+ ++++ +    Q    +  
Sbjct: 535 VSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYT-VQRREEAKD 593

Query: 640 INKLVSDSE-VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           +   +SDS  V ++S Y I+I  L KEG   +A  +   M   G  P
Sbjct: 594 LFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/501 (21%), Positives = 213/501 (42%), Gaps = 6/501 (1%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V T N ++   F+  +I  A + +  M ++G  P+  T   +I  L     VD++  +
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELL 173

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L +M D G+      YT +I       + EEA ++F+ M    L+PD +++   ++ LC+
Sbjct: 174 LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCK 233

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH--- 376
           + R  +A +I   M   G  P    +  ++ G    G F + ++F     G     +   
Sbjct: 234 HGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293

Query: 377 -NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
              L++     G    A  IL +M  + ++ D  +++  I  LC    +  A +   +M+
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKI 493
            + V P+   Y + + G C   +   A  +  ++    +   +I+ ++ +V  +C+  ++
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            +A  +F  +   G       FN LI G C++ ++ KA  +     S+G    T TY  +
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G  K  R  D L +  +M  +        Y I++  +    +        + M+  G 
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT 533

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
                T   +L GL   +          KL + +   + +  N +IN ++      +A  
Sbjct: 534 TVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKD 593

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           L   +   G VP+A+T+G+++
Sbjct: 594 LFSAISDSGLVPNASTYGIMI 614



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/492 (20%), Positives = 187/492 (38%), Gaps = 100/492 (20%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL-EDM 333
           Y  ++   CR  + E  +  F  +    L  D+     ++ CLC   R DDA  +L   M
Sbjct: 11  YGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRM 70

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
             +G  P    +  +++ LC+  +  ++++ L            A  E  C+        
Sbjct: 71  TELGCVPDAFSYAIVLKRLCDDNRSQQALDLLR---------MMAKEEGVCSP------- 114

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
                       D  ++N  I    +  +I KA  L   M+    VPD  T+++ +   C
Sbjct: 115 ------------DVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALC 162

Query: 454 K-----------------------------------LCNYEDALRVFRQVSAQSLVLDSI 478
           K                                   L  +E+A ++FR+++ + L+ D +
Sbjct: 163 KARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIV 222

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           S++  ++ LC+  +  EA E+F  M+  G   +  ++ IL++G          +   +  
Sbjct: 223 SWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTM 282

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G       +T ++    K     + +++L++M  +G + DV  Y  LI ++    +L
Sbjct: 283 KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRL 342

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL--------HLVSSGINK-------- 642
            D    FN M+  G+ P+     SL+ G      L         ++++GI +        
Sbjct: 343 ADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNS 402

Query: 643 ----LVSDSEVLDSS----------------MYNILINGLWKEGLTSQASYLLDLMLGKG 682
               +  +  V+D+                 M+N LI+G    G   +A  +LD M+  G
Sbjct: 403 IVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAG 462

Query: 683 WVPDATTHGLLV 694
             PD  T+  LV
Sbjct: 463 IGPDTFTYNTLV 474



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 142/325 (43%), Gaps = 4/325 (1%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRM 433
           +  ++  CC A +  L      ++    + AD  + N  ++ LC  +    A + LL RM
Sbjct: 11  YGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRM 70

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL--DSISYSKLVEGLCQVE 491
                VPD  +Y+  +   C     + AL + R ++ +  V   D ++Y+ ++ G  +  
Sbjct: 71  TELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEG 130

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           KI +A  ++  M + G      + N +I  LC  R VD A  L      +G      TYT
Sbjct: 131 KIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYT 190

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G   L R ++   +  +M   G   D+ ++   + S+ +  + K+ A  F  M   
Sbjct: 191 SMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAK 250

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G  P+  T   LLHG A       + S  N +  D  V +  ++ ILI+   K G+  +A
Sbjct: 251 GHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEA 310

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGS 696
             +L  M G+G  PD  T+  L+ +
Sbjct: 311 MLILSEMQGQGLSPDVFTYSTLISA 335



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 14/316 (4%)

Query: 59  HNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
             LSPD      LI  L     L+ A+  F  + I    Q     Y  +I      G++ 
Sbjct: 320 QGLSPDVFTYSTLISALCRMGRLADAVDKFNQM-IGTGVQPNTVVYHSLIQGFCTHGDLV 378

Query: 114 EMEGLCQNMVKERYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           + + L   M+    P    A   S+V S     RV  A  +   +   G +  + +FN +
Sbjct: 379 KAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTL 438

Query: 173 LGA---IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           +     + E  + F+    V   M+ AGI P+  T N L+   F++ RI+  L+ FR M 
Sbjct: 439 IDGYCLVGEMGKAFS----VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMS 494

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
            K   P + T+ I++ GL    R   +  +L EM   G  + L  Y  I+  LCR N  +
Sbjct: 495 DKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTD 554

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           EAI +F+ +  +++  +  T   +IN +    R ++A D+   +   GL P    +  ++
Sbjct: 555 EAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMI 614

Query: 350 RGLCEVGKFDESVNFL 365
           R L + G  +E+ N  
Sbjct: 615 RNLLKEGSVEEADNMF 630



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 31/65 (47%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  +  +G+VPN  T   ++  L +   +E A + F  M K GC P SR     I+ L+
Sbjct: 594 LFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLL 653

Query: 249 ANSRV 253
               +
Sbjct: 654 EKGEI 658


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 147/653 (22%), Positives = 281/653 (43%), Gaps = 48/653 (7%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           ++S+    +E  ++ L  +L+P  +  VL + +D   AL  F W   Q R++H A  Y  
Sbjct: 143 LRSNWNPKFEENLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYT 202

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+       ++     LCQ                            GA R+L  M   G
Sbjct: 203 ML-------DILSKTRLCQ----------------------------GARRILRLMTRRG 227

Query: 162 FKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            + S + F+ V+  +   + G   + + +   M KAG+ P++   N  + VL + N++E 
Sbjct: 228 IERSPEAFSYVM--VSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEK 285

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL    RM   G  P+  ++  +IKG     R+DD++ ++ EM   G   +   Y  ++ 
Sbjct: 286 ALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMA 345

Query: 281 MLCRENKLEEAIRLFK-MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
            LC++ K+EE  RL + M++  +L+PD++TY  LI  L ++   DDA   L +    G  
Sbjct: 346 FLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFH 405

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
                +  +V   C+    D++ + + D      +P    + A+++  C  GK   AK +
Sbjct: 406 IDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKM 465

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L++M       +  ++ + +  LC N +  +A E++         P+  TYSA + G  +
Sbjct: 466 LQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRR 525

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF-CCMSKNGCSLSSS 513
                +A  + R++  +  + + +  + L++ LC+ + +  A +    C+ K GC+++  
Sbjct: 526 EGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHK-GCAVNVV 584

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +F  +IYG C +  +D A+ +    Y S       TYT +   L K  R  +   ++ +M
Sbjct: 585 NFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKM 644

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           L +G       Y  +I    +  ++ D       M+     P +     ++  L      
Sbjct: 645 LGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI--ARQPFKTVYNQVIEKLCYFGNR 702

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                 + K++  +  LD+   +ILI     +G    A  +   M  +  +PD
Sbjct: 703 EEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPD 755



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 211/487 (43%), Gaps = 29/487 (5%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           +L++L +T   + A    R M ++G   +   F  V+        + +++ IL  M   G
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++ +LS     I +L + NKLE+A+R  + M+   + PD ++Y  LI   C+  R+DDA 
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAG 387
           +++ +M   G  P    +  ++  LC+  K +E    +E+         N+ L       
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMV------QNSNL------- 369

Query: 388 KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                           I D  ++N  I  L ++     A   L          D   YSA
Sbjct: 370 ----------------IPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSA 413

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            V   CK  N + A  +   + ++    D ++Y+ +++G C+V KI EA ++   M K+G
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHG 473

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  ++ ++ +L+ GLC   K  +A  + +++     +    TY+ +M GL +  +  +  
Sbjct: 474 CKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEAC 533

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M+ +G   +     +LIQS+     +     +    +  G   +     S+++G 
Sbjct: 534 DLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGF 593

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                L    S +  +   ++  D+  Y  L + L K+    +AS L+  MLGKG  P  
Sbjct: 594 CQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTP 653

Query: 688 TTHGLLV 694
            T+  ++
Sbjct: 654 VTYRAVI 660



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/519 (20%), Positives = 217/519 (41%), Gaps = 52/519 (10%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK- 195
           L+  + + +R++ A+ ++  M   G       +  V+  + ++ R   +   + + MV+ 
Sbjct: 308 LIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKD-RKVEEVKRLMENMVQN 366

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           + ++P+  T N L+  L +    + AL   R   +KG   +   +  V+     N  +D 
Sbjct: 367 SNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDK 426

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + S++ +M+  G   ++  YT II   CR  K++EA ++ + M      P+ +TY  L+N
Sbjct: 427 AKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLN 486

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC N +  +A +++        TP    +  ++ GL   GK  E+              
Sbjct: 487 GLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA-------------- 532

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                   C+  +  + K  L    D         N+ I+ LC N+ +  A + L   + 
Sbjct: 533 --------CDLTREMIEKGFLPNPVD--------INLLIQSLCRNQNVVGAKKYLEECLH 576

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                +   +++ + G C++ + + AL +   +   +   D+I+Y+ L + L +  ++ E
Sbjct: 577 KGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDE 636

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E+   M   G   +  ++  +I+  C   +VD  ++L  L          + Y +++ 
Sbjct: 637 ASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKL--LEKMIARQPFKTVYNQVIE 694

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS-MSEQNKLK----DCALFFNVMVK 610
            L      ++   +L ++L     LD +   ILI+S + + N L      C +F     +
Sbjct: 695 KLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMF-----R 749

Query: 611 AGLVPD--------RETMLSLLHGLADGSQLHLVSSGIN 641
             L+PD        ++ +L  +   AD   L  V  GI 
Sbjct: 750 RNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQ 788



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 1/222 (0%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D+I Y  +++ L +      A  +   M++ G   S  +F+ ++        +  A+R+ 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
           +L   +G     S     +  LVK  + +  L  L +M V G   D+ +Y  LI+   + 
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL-DSSM 654
           +++ D       M   G  PD+ +  +++  L    ++  V   +  +V +S ++ D   
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVT 375

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           YN LI  L K G    A   L     KG+  D   +  +V S
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDS 417


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 216/485 (44%), Gaps = 6/485 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   + + + + G +P+V + N +L  L +  +++ AL  F  M KK   PNS T+ I
Sbjct: 335 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNI 393

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I  L    RV+++  IL EM    +   L     ++  LC+  KLEEA ++F+      
Sbjct: 394 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 453

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             PD +TY  LI+ L +  ++D+A  + E M+  G      V+  ++R     G+ ++  
Sbjct: 454 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 513

Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
              ++       P     N  ++C   AG+    + I E +     + D  S++I I  L
Sbjct: 514 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  + R+   +   M       D   Y+A V G CK      A  +  ++  + +    
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y  +V+GL +++++ EA  +F      G  L+   ++ LI G   + ++D+A  +   
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G +    T+  ++  LVK +   + LV    M    C  +   Y ILI  +    K
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
                +F+  M K GLVP+  T  +++ GLA    +    S   +  ++  + D++ +N 
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 813

Query: 658 LINGL 662
           LI G+
Sbjct: 814 LIEGM 818



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 241/540 (44%), Gaps = 17/540 (3%)

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI-VPNVDTLNYLLEVLFETNRIESAL 222
           L  D ++ VL  +  +    A    V +EM   G  +PN     +L   L    R++ A+
Sbjct: 109 LPADAYHAVLPFLHHD---LAALEKVLEEMAVLGYGLPN-QACAHLAAALVRARRLDDAV 164

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
                M +    P    + ++I  L    R + ++ +L +M ++G ++ +  +T ++  L
Sbjct: 165 LAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRAL 224

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            RE ++ +A+ L   ++   L PD + Y   I+C  +   +D A     ++   GL P D
Sbjct: 225 AREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD 284

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED-------KCGYVTSPHNALLECCCNAGKFFLAKCI 395
             +  ++  LC+ G+  E+              C Y    +N ++    +AG+F  A  +
Sbjct: 285 VSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA---YNTMIMGYGSAGRFEDAYKL 341

Query: 396 LEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           LE++ +R  I    S+N  +  L +  ++ +A  L   ++     P+ +TY+  +   C 
Sbjct: 342 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCL 400

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               E+A R+  ++   SL  + ++ + +V+ LC+  K+ EA ++F   S+ GC+    +
Sbjct: 401 GGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT 460

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI GL    +VD+A RL      +G +     YT ++       R +D   +  +++
Sbjct: 461 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI 520

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             GC  D+      +  + +  +++   + F  +   G +PD  +   L+HGL    Q  
Sbjct: 521 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 580

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             S+  + +      LD+  YN +++G  K G   +A  +L+ M  K   P   T+G +V
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 139/592 (23%), Positives = 266/592 (44%), Gaps = 25/592 (4%)

Query: 50  YEAKIQSLRHN-LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           +E K Q L+ + +S   +I VL     L  A ++F  +  ++     A  Y  MI+  G 
Sbjct: 273 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP-CAYAYNTMIMGYGS 331

Query: 109 AGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVNM------NSG 160
           AG  E+   L + + +ER   P+V  +  S++       +V+ A+ +   M      NS 
Sbjct: 332 AGRFEDAYKLLERL-RERGCIPSV-VSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 389

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
            + + +D+  + LG  VEE     D      EM  A + PN+ T+N +++ L +  ++E 
Sbjct: 390 TYNIIIDM--LCLGGRVEEAYRILD------EMEHASLFPNLLTVNIMVDRLCKARKLEE 441

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   F    ++GC P+  T+  +I GL    +VD++  +  +M D G       YT +I 
Sbjct: 442 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 501

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                 + E+  ++FK +      PD       ++C+ +   ++    I ED+   G  P
Sbjct: 502 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 561

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ GL + G+  E+ N      + G+      +NA+++  C +GK   A  IL
Sbjct: 562 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 621

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M ++ +     ++   +  L + + + +AY L        +  +   YS+ + G  K+
Sbjct: 622 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 681

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A  +  ++  + L  +  +++ L++ L + E+I EA+  F  M +  C  ++ ++
Sbjct: 682 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 741

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +ILI GLC ++K +KA          G      TYT ++ GL K+    D   +  +   
Sbjct: 742 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 801

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            G   D  ++  LI+ MS  N+  +    F      G   + ++ +SLL  L
Sbjct: 802 NGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDAL 853



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 133/610 (21%), Positives = 245/610 (40%), Gaps = 45/610 (7%)

Query: 144 HYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVD 203
           H+ +    +VL  M   G+ L       +  A+V  +R   D V     M +    P   
Sbjct: 122 HHDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARR-LDDAVLAVAVMRRLKFRPAFS 180

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
               L+  L E  R E AL+  R+M + G       F  +++ L    +V D+++++ E+
Sbjct: 181 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 240

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
               ++ ++  Y   I    +   ++ A + F  ++A  L PD+++Y  +I  LC+  RL
Sbjct: 241 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRL 300

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNAL 379
            +A ++   M      P    +  ++ G    G+F+++   LE      C       N++
Sbjct: 301 GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSI 360

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           L C     K   A  + E M      +  ++NI I  LC    + +AY +L  M  +S+ 
Sbjct: 361 LTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 420

Query: 440 P-----------------------------------DCATYSAFVLGKCKLCNYEDALRV 464
           P                                   DC TY + + G  K    ++A R+
Sbjct: 421 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 480

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F ++       + + Y+ L+       +  +  ++F  + + GC    +  N   Y  CV
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN--TYMDCV 538

Query: 525 MR--KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
            +  +V+K   +     S G      +Y+ ++ GL K  +A++   +   M  +G ALD 
Sbjct: 539 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 598

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            AY  ++    +  K+         M +  + P   T  +++ GLA   +L        +
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV-GEE 701
             S    L+  +Y+ LI+G  K G   +A  +L+ M+ KG  P+  T   L+ + V  EE
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718

Query: 702 IDSRRFAFDS 711
           I+     F S
Sbjct: 719 INEALVCFQS 728



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 197/434 (45%), Gaps = 17/434 (3%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           L  A KIF+  S Q+       TYC +I  LG  G V+E   L + M+   +        
Sbjct: 439 LEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 497

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVY 190
           SL+ +F  H R     ++   +   G K  + + N  +  +     VE+ R       ++
Sbjct: 498 SLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR------MIF 551

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +++   G +P+V + + L+  L +  +     + F  M ++G   ++R +  V+ G   +
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +V  +  IL EM +  +Q  ++ Y  I+  L + ++L+EA  LF+  ++  +  + + Y
Sbjct: 612 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 671

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLE 366
             LI+   +  R+D+A  ILE+M+  GLTP    +  ++  L +  + +E++    +  E
Sbjct: 672 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
            KC   T  ++ L+   C   K+  A    + M  +  + +  ++   I  L +   I  
Sbjct: 732 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 791

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AY L  R   +  +PD A+++A + G        +A +VF +   +   ++  S   L++
Sbjct: 792 AYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLD 851

Query: 486 GLCQVEKITEAVEV 499
            L + E + +A  V
Sbjct: 852 ALNKSECLEQAAIV 865



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  +I   G  G ++E   + + M+K+   PNV     SL+ + V    +N A+    +M
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY-TWNSLLDALVKAEEINEALVCFQSM 729

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                  +   +++++  +   ++    FVF +++M K G+VPNV T   ++  L +   
Sbjct: 730 KEMKCPPNTYTYSILINGLCRVQKYNKAFVF-WQDMQKQGLVPNVVTYTTMISGLAKVGN 788

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I  A   F R    G  P++ +F  +I+G+   +R  ++  +  E    G ++ +     
Sbjct: 789 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCIS 848

Query: 278 IIPMLCRENKLEEAIRLFKMMRAL 301
           ++  L +   LE+A  +  ++R +
Sbjct: 849 LLDALNKSECLEQAAIVGAVLREI 872


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 229/509 (44%), Gaps = 28/509 (5%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+++   P++ + N+LL  L +          + +M   G   +  T  I++  L   +R
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + +  +    +   G    +  Y  +I  LC E+++ EA RLF  M+ L   PD +TY  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 313 LINCLCE----NLRLDDANDILEDM--IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           LI  LC     N+ L    ++L D+    I   P    +  IV GLC+VG+ DE+    E
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           +       P+                     +M D+ +  D  ++N+ I  LC+  ++ +
Sbjct: 240 EMKTQGMIPN---------------------EMLDQGLQPDMVTFNVLIDTLCKEGKVIE 278

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A +LLG M+ S +VPD  TY++ + G C + +   A  +F  + ++    D ISY+ L+ 
Sbjct: 279 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 338

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G  +  K+ EA++++  M   G   +  +++ L+ G+ +  KVD A +L S+  + G + 
Sbjct: 339 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 398

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            + TY   + GL K     + + +  ++      L++E    LI  + +  KL+     F
Sbjct: 399 NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELF 458

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             +   G  P+  T   ++HG     Q+   +  I K+ ++    D   YN L+ G ++ 
Sbjct: 459 EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 518

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               +   LL  M  K   PDA T  ++V
Sbjct: 519 NKLEEVVQLLHRMAQKDVSPDAITCSIVV 547



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 217/473 (45%), Gaps = 22/473 (4%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN +L  + + K  ++    +Y +M  +G+  +  TLN LL  L   NR+      
Sbjct: 68  SLSSFNHLLSGLAKIKH-YSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F  + ++G  PN  T+  +IKGL    R+ ++  +   M  LG   ++  Y  +I  LC 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 285 ENKLEEAIRLFKMM------RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
              +  A++L + M        ++  P+ +TY  +++ LC+  R D+A  + E+M   G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 339 TPTDDV----------FVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCC 384
            P + +          F  ++  LC+ GK  E+   L    + G V     +N+L+E  C
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G    A+ +   M  +    D  S+N+ I    +  ++ +A +L   M++    P+  
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY + + G       +DA ++F  + A  +  +S +Y   ++GLC+ + + EA+++F  +
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
             +   L   + N LI GLC   K++ A  L     + G      TYT ++ G  +  + 
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
               V++ +M   GC  D+  Y  L++   E NKL++     + M +  + PD
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 539



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 202/460 (43%), Gaps = 79/460 (17%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD--VFNVVLGAIVEEKR---GFADFVFVY 190
           S VFS  N  R++G              LS D    N++L  +    R   GFA F  + 
Sbjct: 86  SQVFSLYNQMRLSG--------------LSSDRCTLNILLNCLCNVNRLREGFAAFAGI- 130

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
              ++ G  PN+ T N L++ L   +RI  A   F RM K GC P+  T+  +IKGL   
Sbjct: 131 ---LRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187

Query: 251 SRVDDSVSILGEM------FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
             ++ ++ +  EM      +++  +  +  Y  I+  LC+  + +EA +LF+ M+   ++
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247

Query: 305 PDEL----------TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           P+E+          T+  LI+ LC+  ++ +A  +L  MI  G+ P    +  ++ G C 
Sbjct: 248 PNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 307

Query: 355 VGKFDES----VNFLEDKC------------GYVTS-----------------------P 375
           VG  + +    V+     C            GY  +                        
Sbjct: 308 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 367

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMV 434
           +++LL+    AGK   AK +   M    IA+   ++ I +  LC+N+ + +A +L   + 
Sbjct: 368 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 427

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            S+   +    +  + G CK    E A  +F ++S +    + ++Y+ ++ G C+  ++ 
Sbjct: 428 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 487

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           +A  +   M  NGC+    ++N L+ G     K+++ ++L
Sbjct: 488 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 527



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F     +N A  + V+M S G +  V  +NV++    +  +   + + +Y EM+ 
Sbjct: 300 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK-VEEAMKLYNEMLL 358

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PNV T + LL+ +F   +++ A   F  M   G   NS T+ I + GL  N  + +
Sbjct: 359 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE 418

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +  E+     +LE+    C+I  LC+  KLE A  LF+ +      P+ +TY  +I+
Sbjct: 419 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 478

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C   ++D AN +++ M   G TP    +  ++RG  E  K +E V  L        SP
Sbjct: 479 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 538



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 80/164 (48%), Gaps = 1/164 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +V+ A ++   M + G   +   + + L  + +    F + + ++ E+  +     ++ L
Sbjct: 380 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF-EAMKLFTELKSSNFKLEIENL 438

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L++ L +  ++E+A + F ++  +G  PN  T+ I+I G     +VD +  ++ +M  
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            G   ++  Y  ++      NKLEE ++L   M   D+ PD +T
Sbjct: 499 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 542


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 124/551 (22%), Positives = 246/551 (44%), Gaps = 42/551 (7%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R FA    ++ +M+++G+  +       +    E+  ++ A     RM  +G   ++  +
Sbjct: 177 RQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPY 236

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            +++ GL  N RV ++V +   M ++G+  +   Y  ++   CR  +LE A+R+   M  
Sbjct: 237 NVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIR 296

Query: 301 LDLMPDE-----------------------------------LTYEELINCLCENLRLDD 325
           L  +P E                                     Y  LI+ LC+N R DD
Sbjct: 297 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDD 356

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV---NFLEDKCGYVT-SPHNALLE 381
           A+ + ++M   GL P +  +  ++  LC+ G  ++++   + + DK   VT  P+N+L+ 
Sbjct: 357 ADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLIN 416

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G    A+ +L  M    +    +   P I  LC N ++    EL   M    +  
Sbjct: 417 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAW 476

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++A + G CK    ++A R+F ++   +++ + ++++ ++EG C V  I +A +++
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M + G    + ++  LI GLC+   V KA    +   +S       + T ++ G  + 
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILI-QSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            R  +   +  +M V G  LD+ ++ I++  ++ + +K K C L F  M + G+ PD   
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVL-FREMKEQGVKPDDIF 655

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              ++  L+    +    +  +++V D    ++  + +LIN L K G    A  L   ML
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 680 GKGWVPDATTH 690
               +P+  T+
Sbjct: 716 AGNVLPNKFTY 726



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 240/586 (40%), Gaps = 32/586 (5%)

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL-VNMNSGGFKLSVDVFNVVL 173
           M GLC+NM                       RV  A+ V  V +N G     V    +V 
Sbjct: 240 MYGLCKNM-----------------------RVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G    E+   A  + +  +M++ G VP+    +++++ L +   +E A     ++   G 
Sbjct: 277 GFCRMEELEMA--LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            PN   +  +I  L  N R DD+  +  EM   G++     Y  +I  LC+   +E+A+ 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LF  MR   +      Y  LIN  C+   LD A  +L  M+  GLTPT   +  ++ GLC
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 354 EVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
             G     +       E    +      AL+   C   K   A  + +KM D  +   + 
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I   C    IRKA++L  +MV   + PD  TY + + G C       A      +
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                VL++ S + L+ G  +  + TE   ++  M+  G  L   SF I++Y        
Sbjct: 575 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +K+  L       G       YT ++  L K +     L    QM+V+G + +   + +L
Sbjct: 635 EKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVL 694

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I ++ +   L    L    M+   ++P++ T    L   A    +   +  ++  +    
Sbjct: 695 INNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME-KAKDLHSAMLQGH 753

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +     +NILI GL K G   +A  L+  +   G+ PD  ++  ++
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 238/544 (43%), Gaps = 49/544 (9%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADF 186
           PNV  A  +L+     + R + A R+   M   G + +   + +++ A+   KRG   D 
Sbjct: 336 PNVF-AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC--KRGMIEDA 392

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++ +M   GI   V   N L+    +   ++ A      M K+G  P + ++  +I G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  N  +   + +  EM + GI      +T +I   C++ K++EA RLF  M   +++P+
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 307 ELTYEELIN--CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC---EVGKFDES 361
           E+T+  +I   CL  N+R   A  + + M+ +GL P +  +  ++ GLC    V K +E 
Sbjct: 513 EVTFNVMIEGYCLVGNIR--KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570

Query: 362 VNFLEDKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
           V  LE+    + +    ALL      G+F     + ++MA R +  D  S+ I +    +
Sbjct: 571 VADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             +  K+  L   M    V PD   Y+  +    K  N   AL  + Q+       ++++
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 690

Query: 480 YSKLVEGLCQVEKITEAVEVFC----------------C----------MSK-------- 505
           ++ L+  LC+   +  A E+ C                C          M K        
Sbjct: 691 HTVLINNLCKSGYLGSA-ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 506 -NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G   S  SFNILI GLC   K+ +AI L S    SG S    +Y+ I+  L K+    
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
               +  +ML +G   DV AY I I+  +   +       +  M+++G+ P+ +T  +LL
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 625 HGLA 628
            G++
Sbjct: 870 SGIS 873



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 210/479 (43%), Gaps = 13/479 (2%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G   N  T   ++  L+   +   +  +  +M   G+ L+   YT  I   C    L+ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L   M +  +    + Y  L+  LC+N+R+ +A ++   M+ IG+T  +  +  +V G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 352 LCEVGKFDESVNFLED--KCGYVTSPHNALLECCCNAGKFFLAKCILE------KMAD-R 402
            C + + + ++    D  + G+V S  N    C     +    + + E      K+ D  
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEAN----CSFMIDELRKKELVEEAFSLACKLGDLG 333

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + +  ++N  I  LC+NE    A  L   M    + P+  TY+  +   CK    EDAL
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F ++  + + +    Y+ L+ G C+   +  A  +   M K G + +++S++ LI GL
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C    +   + L       G ++   T+T ++ G  K ++  +   +  +M+      + 
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             + ++I+       ++     ++ MV+ GL PD  T  SL+ GL   S +   +  +  
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           L +   VL++     L+ G ++EG  ++  +L D M  +G   D  +  ++V +++ + 
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 98/478 (20%), Positives = 201/478 (42%), Gaps = 59/478 (12%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G+++   GL   MVKE       +   L+     +  ++  M +   
Sbjct: 416 NGYCKQ-------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 468

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G   +   F  ++    ++K+   +   ++ +M+ + ++PN  T N ++E      
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKK-MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS------------------------- 251
            I  A   + +M + G  P++ T+  +I GL   S                         
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 252 ----------RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                     R  ++  +  EM   G++L+L  +T I+    +++  E++  LF+ M+  
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + PD++ Y  +I+ L +   +  A +  + M+V G +P       ++  LC+ G    +
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 362 V---------NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
                     N L +K  Y     N  L+     G    AK +   M    +A   S+NI
Sbjct: 708 ELLCKEMLAGNVLPNKFTY-----NCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNI 762

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I+ LC+  +I++A +L+ ++  S   PDC +YS  +   CK+ +   A  ++ ++  + 
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 473 LVLDSISYSKLVEGLCQVEKITE-AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           L  D ++Y+  +   C V   ++ A+ ++  M ++G   +  ++  L+ G+ +M   D
Sbjct: 823 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 35/303 (11%)

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +LG  + S +  +  T S  +    K+  +  A  +F ++    + LD   Y+  +   C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   +  A  +   M   G   S+  +N+L+YGLC   +V +A+ ++++  + G +    
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQM-----------------------LVE--------- 576
           TY  ++ G  +++  +  L +   M                       LVE         
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 577 ---GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              G   +V AY  LI  + +  +  D    F  M   GL P+  T   L+H L     +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  +K+      +    YN LING  K+G   +A  LL  M+ +G  P A ++  L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 694 VGS 696
           +  
Sbjct: 450 IAG 452



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           KEM+   ++PN  T N  L+       +E A D    M  +G   +  +F I+IKGL   
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKA 770

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++ +++ ++ ++ + G   +   Y+ II  LC+   + +A  L+  M    L PD + Y
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              I     +   D A  I  +MI  G+ P  D +  ++ G+  +  +D S
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 210/436 (48%), Gaps = 6/436 (1%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  F  +LG++V+    ++  V ++++M   GI  N+ TL+ L+    +      +   
Sbjct: 68  SIIQFGKILGSLVKANH-YSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F  + KKG  P++ T   +IKGL     +  ++    ++  LG QL    Y  +I  LC+
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             + + A+ + + +    +  D + Y  +I+ +C++  ++DA D   +M+   + PT   
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           +  ++ GLC +G+  +++  L        +P     + L++  C  GK   AK +   M 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            + +  +  ++N  +   C   E+ KA  +   M    V PD  +YS  + G CK+   +
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A+++F ++  + +  D ++Y+ L++GLC+  +I+ A+++   M   G   +  ++N L+
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             LC    VDKAI L +         +  TY  ++ GL K  R KD   V   +LV G  
Sbjct: 427 DALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYN 486

Query: 580 LDVEAYCILIQSMSEQ 595
           +DV  Y  +I+   ++
Sbjct: 487 IDVYTYNTMIKGFCKK 502



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 185/424 (43%), Gaps = 9/424 (2%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           I+  L + N     + L + M    +  + +T   LINC  +      +  +  +++  G
Sbjct: 75  ILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKG 134

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC---GYVTS--PHNALLECCCNAGKFFLA 392
             P       +++GLC  G   ++++F  DK    G+  +   +  L+   C  G+   A
Sbjct: 135 YEPDAITLTTLIKGLCLKGDIHKALHF-HDKVLALGFQLNQVSYRTLINGLCKVGQTKAA 193

Query: 393 KCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
             +L ++ D K+   D   +N  I  +C+++ +  A++    MV   + P   TY+  + 
Sbjct: 194 LEMLRRI-DGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLIC 252

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C +   +DA+ +  ++  +++     ++S LV+  C+  K+ EA  VF  M K     
Sbjct: 253 GLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKP 312

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++N L+ G C++ +V+KA  + +     G +    +Y+ ++ G  K++   + + + 
Sbjct: 313 NIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLF 372

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M  +    DV  Y  LI  + +  ++         M   G  P+  T  SLL  L   
Sbjct: 373 EEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKN 432

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             +      + KL   +       YNILINGL K G    A  + + +L  G+  D  T+
Sbjct: 433 HHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTY 492

Query: 691 GLLV 694
             ++
Sbjct: 493 NTMI 496



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 3/270 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           + KR   T  TY  +I  L + G +++  GL   M+ E           LV +F    +V
Sbjct: 236 VAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKV 295

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
             A  V V M     K ++  +N ++ G  +  +   A+ +F    M + G+ P+V + +
Sbjct: 296 KEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIF--NTMAQIGVAPDVHSYS 353

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            ++    +   ++ A+  F  MH K   P+  T+  +I GL  + R+  ++ ++GEM D 
Sbjct: 354 IMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDR 413

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G    +  Y  ++  LC+ + +++AI L   ++  ++ P   TY  LIN LC++ RL DA
Sbjct: 414 GQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDA 473

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
             + ED++V G       +  +++G C+ G
Sbjct: 474 QKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 98/477 (20%), Positives = 193/477 (40%), Gaps = 48/477 (10%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P++     +L  L + N     +   R+M   G   N  T  I+I           S S+
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC- 318
              +   G + +    T +I  LC +  + +A+     + AL    ++++Y  LIN LC 
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 319 --------ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
                   E LR  D   +  D+++         +  I+ G+C+    +++ +F      
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVM---------YNTIIDGVCKDKLVNDAFDFYS---- 233

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
                                     E +A R      ++N  I  LC   +++ A  LL
Sbjct: 234 --------------------------EMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLL 267

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M++ ++ P   T+S  V   CK    ++A  VF  +  + +  + ++Y+ L+ G C V
Sbjct: 268 HKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLV 327

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ +A  +F  M++ G +    S++I+I G C ++ VD+A++L    +         TY
Sbjct: 328 NEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTY 387

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ GL K  R    L ++ +M   G   ++  Y  L+ ++ + + +         +  
Sbjct: 388 NSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKD 447

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
             + P   T   L++GL    +L         ++ +   +D   YN +I G  K+G 
Sbjct: 448 HNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGF 504


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 175/753 (23%), Positives = 307/753 (40%), Gaps = 123/753 (16%)

Query: 35  LSSETDMIKSHQTT-DYEAKIQSLRHNLSPDHLIRVLD----NTNDLSSALKIFKWVSIQ 89
           L  + D      TT D+  KI      +      +VLD    +  D  SAL+ FK V  +
Sbjct: 31  LPPDADHFPEKMTTSDFPGKIPPEAPCIPSQK--QVLDTLLLHKADPRSALRFFKQVETK 88

Query: 90  KRFQHTADTYCKMILKLGLAGNVE---EMEGLCQNMVKERYPNVREALISLVFSFVNHYR 146
             F  TAD  C ++L++ LA N E   + + L    V        + L+ L+      Y 
Sbjct: 89  GGFAKTADVLC-LLLQI-LASNPETHGDAKHLLNKYVFGDSAPAAKVLVELLVECAERY- 145

Query: 147 VNGAMRVLVNMNSGGFKLS-VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
                         GFKLS   VFN +L + V   +   + V  ++ M++ G+VP V  +
Sbjct: 146 --------------GFKLSDSRVFNYLLISYVRANK-ITEAVECFRAMLEDGVVPWVPFV 190

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N LL  +   N +E A   F  M ++    +  T +++++  +   +  ++    G+   
Sbjct: 191 NVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAG 250

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC------LCE 319
            G++L+ + Y+ +I  +CR + L+ A +L +    L  +P E TY  +I          E
Sbjct: 251 RGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGE 310

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA- 378
            LRL D  ++++  + + +     V   +++G C  G  + ++   ++      +P+ A 
Sbjct: 311 ALRLKD--EMVDSRVPVNVA----VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAI 364

Query: 379 ---LLECCCNAG------------------------KFFL-----------AKCILEKMA 400
              L+E C   G                         F L           A  +L+   
Sbjct: 365 FSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV 424

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           +  IA   ++NI + WLCE  ++ +A  L  +M+   + P   +Y+  +LG CK    +D
Sbjct: 425 ENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDD 484

Query: 461 ALRV-----------------------------------FRQVSAQSLVLDSISYSKLVE 485
           A  V                                   F Q+ A  +V    +++ ++ 
Sbjct: 485 AHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIIN 544

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC+V +++EA +      K     +S ++N +I G      +D A  +      S  S 
Sbjct: 545 GLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISP 604

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TYT ++ G  K  +    L +   M  +G  LD+  Y  LI    +   +++   FF
Sbjct: 605 NVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFF 664

Query: 606 NVMVKAGLVPDR---ETMLSLLHGLAD-GSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           + +++ GL P+      M+S    L +  + L+L    IN  +      D  +Y  LI+G
Sbjct: 665 SKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIP----CDLKIYTSLIDG 720

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L KEG  S A  L   ML +G VPD   + +L+
Sbjct: 721 LLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLI 753



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 227/511 (44%), Gaps = 33/511 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ E+V+ G+ PNV   + L+E   +   +E A + + RM   G  P       ++KG  
Sbjct: 349 LFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFR 408

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             + ++++  +L    + GI   ++ Y  ++  LC   K+ EA  L+  M    + P  +
Sbjct: 409 KQNLLENAYLLLDGAVENGIASVVT-YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLV 467

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           +Y  +I   C+   +DDA++++  +I  GL P    +  ++ G  + G  + + N     
Sbjct: 468 SYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFN----- 522

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAY 427
                                     + ++M    I   D ++N  I  LC+   + +A 
Sbjct: 523 --------------------------MFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEAR 556

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           + L   +  S +P   TY+  + G  K    + A  V+R++    +  + I+Y+ L+ G 
Sbjct: 557 DKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGF 616

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+  A+++   M + G  L  + +  LI G C M+ ++ A +  S     G +  T
Sbjct: 617 CKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNT 676

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             Y  ++     L   +  L +  +M+      D++ Y  LI  + ++ KL      ++ 
Sbjct: 677 IVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSE 736

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M+  G+VPD      L++GL +  QL      + ++  ++      +YN LI G +KEG 
Sbjct: 737 MLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGN 796

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
             +A  L D ML KG VPD TT+ +LV   +
Sbjct: 797 LQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 162/639 (25%), Positives = 263/639 (41%), Gaps = 51/639 (7%)

Query: 67  IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME---GLCQNMV 123
           I  L + +D +SAL  FK VS      HT +T   M+  L + G VE+M     L Q  V
Sbjct: 93  IGALKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQV 152

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVLGAIVEE 179
             R PN          +      + G +R     L  M   GF L+   +N ++  +++ 
Sbjct: 153 INRNPNT-------YLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQP 205

Query: 180 KRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
             GF  + + VYK M+  G+ P++ T + L+  L       + +D    M   G  PN  
Sbjct: 206 --GFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIY 263

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ I I+ L    R+DD+  IL  M D G   ++  YT +I  LC   KL++A  L+  M
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM 323

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           RA    PD +TY  L++       L+       +M   G  P    +  +V  LC+ GK 
Sbjct: 324 RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           D++ +                               +L+ M  R I  +  ++N  I  L
Sbjct: 384 DQAFD-------------------------------MLDVMRVRGIVPNLHTYNTLISGL 412

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                + +A EL   M    V P   +Y  F+    KL + E AL  F ++  + ++   
Sbjct: 413 LNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSI 472

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            + +  +  L ++ +I EA ++F  +   G S  S ++N+++       ++DKA +L + 
Sbjct: 473 AACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTE 532

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             S G          ++  L K  R  +   +  ++     A  V  Y ILI  + ++ K
Sbjct: 533 MLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGK 592

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L      F  M ++G  P+  T  +LL  L     + L      ++   +   D   YN 
Sbjct: 593 LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNT 652

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATT-HGLLVG 695
           +I GL KEG    A +    M  K   PD  T + LL G
Sbjct: 653 IIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPG 690



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 215/508 (42%), Gaps = 39/508 (7%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           IV   +T NY+LE L    R+E     F  M K+    N  T+  + K L     +  + 
Sbjct: 118 IVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAP 177

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
             LG+M   G  L    Y  +I  L +    +EA++++K M +  L P   TY  L+  L
Sbjct: 178 FALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVAL 237

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
                     D+LE+M  +GL P    +   +R L   G+ D+                 
Sbjct: 238 GRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDD----------------- 280

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
                         A  IL+ M D     D  ++ + I  LC   ++ KA EL  +M  S
Sbjct: 281 --------------AYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRAS 326

Query: 437 SVVPDCATYSAFVLGKCKLCNYED---ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           S  PD  TY   +    K  NY D     R + ++ A     D ++Y+ LVE LC+  K+
Sbjct: 327 SHKPDLVTYITLM---SKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            +A ++   M   G   +  ++N LI GL  +R++D+A+ L +   S G + T  +Y   
Sbjct: 384 DQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLF 443

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +    KL   +  L    +M   G    + A    + S++E  ++++    FN +   GL
Sbjct: 444 IDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGL 503

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD  T   ++   +   Q+   +  + +++S+    D  + N LI+ L+K G   +A  
Sbjct: 504 SPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQ 563

Query: 674 LLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           +   +      P   T+ +L+ + +G+E
Sbjct: 564 MFGRLKDLKLAPTVVTYNILI-TGLGKE 590



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/686 (20%), Positives = 287/686 (41%), Gaps = 48/686 (6%)

Query: 53   KIQSLRHNL-SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
            +++ +  NL + + LI  L N   L  AL++F  +        TA +Y   I   G  G+
Sbjct: 394  RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME-SLGVAPTAYSYVLFIDYYGKLGD 452

Query: 112  VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
             E+     + M K        A  + ++S     R+  A  +  ++++ G       +N+
Sbjct: 453  PEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNM 512

Query: 172  VLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            ++      K G  D    +  EM+  G  P++  +N L++ L++  R++ A   F R+  
Sbjct: 513  MMKCY--SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570

Query: 231  KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
                P   T+ I+I GL    ++  ++ + G M + G       +  ++  LC+ + ++ 
Sbjct: 571  LKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDL 630

Query: 291  AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
            A+++F  M  ++  PD LTY  +I  L +  R   A      M    L+P       ++ 
Sbjct: 631  ALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLP 689

Query: 351  GLCEVGKFDESVNFLED---KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIA 405
            G+ + G+ ++++  + +   + G  TS      L+EC     +   A    E +    I 
Sbjct: 690  GVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSIC 749

Query: 406  DCDSWNIP-IRWLCENEEIRKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYEDALR 463
              D+  +P IR LC+ ++   A +L  +   S    P   +Y+  + G       E AL+
Sbjct: 750  QDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALK 809

Query: 464  VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            +F ++       +  +Y+ L++   + ++I E  E++  M   GC  +  + NI+I  L 
Sbjct: 810  LFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869

Query: 524  VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM---------- 573
                ++KA+ L     S   S T  TY  ++ GL+K  R+++ + +  +M          
Sbjct: 870  KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929

Query: 574  -------------------------LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
                                     + EG   D+++Y IL++ +    ++ D   +F  +
Sbjct: 930  IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL 989

Query: 609  VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
               GL PD  +   +++GL    +L    S  +++ +     +   YN LI      G+ 
Sbjct: 990  KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMV 1049

Query: 669  SQASYLLDLMLGKGWVPDATTHGLLV 694
             QA  + + +   G  P+  T+  L+
Sbjct: 1050 DQAGKMFEELQFMGLEPNVFTYNALI 1075



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 125/608 (20%), Positives = 259/608 (42%), Gaps = 19/608 (3%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            TY  M+     AG +++   L   M+ E        + SL+ +     RV+ A ++   +
Sbjct: 509  TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568

Query: 158  NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                   +V  +N+++  + +E +     + ++  M ++G  PN  T N LL+ L + + 
Sbjct: 569  KDLKLAPTVVTYNILITGLGKEGK-LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA 627

Query: 218  IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            ++ AL  F RM    C P+  T+  +I GLI   R   +     +M        ++ YT 
Sbjct: 628  VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYT- 686

Query: 278  IIPMLCRENKLEEAIRL-FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++P + ++ ++E+AI++  + +    L      + EL+ C+     +++A    E ++  
Sbjct: 687  LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCN 746

Query: 337  GLTPTDDVFVDIVRGLCEVGKFDESVNFLED---KCGYVTSP--HNALLECC--CNAGKF 389
             +   D++ + ++R LC+  K  ++    +      G   +P  +N L++    CN    
Sbjct: 747  SICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCN---- 802

Query: 390  FLAKCILEKMADRKIADC----DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
             + +  L+   + K A C     ++N+ +    +++ I + +EL   M+     P+  T+
Sbjct: 803  -ITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITH 861

Query: 446  SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
            +  +    K  +   AL ++ ++ +        +Y  L+ GL +  +  EA+++F  M  
Sbjct: 862  NIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPD 921

Query: 506  NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
              C  + + +NILI G      V+ A  L       G      +YT ++  L    R  D
Sbjct: 922  YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDD 981

Query: 566  LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
             +    ++ + G   D  +Y ++I  + +  +L++    F+ M   G+ P+  T  +L+ 
Sbjct: 982  AVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALIL 1041

Query: 626  GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
               +   +        +L       +   YN LI G  K G   +A  +   M+  G  P
Sbjct: 1042 HFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSP 1101

Query: 686  DATTHGLL 693
            +A T   L
Sbjct: 1102 NAGTFAQL 1109



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 139/645 (21%), Positives = 271/645 (42%), Gaps = 52/645 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY   I  LG AG +++  G+ + M  E   P+V    + L+ +     +++ A  +   
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV-LIDALCAAGKLDKAKELYTK 322

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFV---YKEMVKAGIVPNVDTLNYLLEVLF 213
           M +   K  +    V    ++ +   + D   V   + EM   G  P+V T   L+E L 
Sbjct: 323 MRASSHKPDL----VTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALC 378

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           ++ +++ A D    M  +G  PN  T+  +I GL+   R+D+++ +   M  LG+     
Sbjct: 379 KSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAY 438

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y   I    +    E+A+  F+ M+   +MP        +  L E  R+ +A DI  D+
Sbjct: 439 SYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI 498

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKF 389
              GL+P    +  +++   + G+ D++   L +       P     N+L++    AG+ 
Sbjct: 499 HNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRV 558

Query: 390 FLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  +  ++ D K+A    ++NI I  L +  ++ KA +L G M  S   P+  T++A 
Sbjct: 559 DEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   CK    + AL++F +++  +   D ++Y+ ++ GL +  +   A   +  M K   
Sbjct: 619 LDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-L 677

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           S    +   L+ G+    +V+ AI++     + SG   +   + ++M  ++     ++ +
Sbjct: 678 SPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAI 737

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA-GLVPDRETMLSLLHG 626
                ++      D      LI+ + +Q K  D    F+   K+ G  P  E+   L+ G
Sbjct: 738 SFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDG 797

Query: 627 LADGS------------------------QLHLVSSGINKLVSDSEVLDSSM-------- 654
           L   +                         L L + G +K + +   L + M        
Sbjct: 798 LLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPN 857

Query: 655 ---YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              +NI+I+ L K    ++A  L   ++   + P   T+G L+G 
Sbjct: 858 IITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 211/492 (42%), Gaps = 39/492 (7%)

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           + +  ++E   E  R++ A++    MH +G  PN+RT   +IK       V+ +  +  E
Sbjct: 136 EVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEE 195

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G+Q +   Y  ++ M C+   + EA +   +M     + D  T+  +I+       
Sbjct: 196 MCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGY 255

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
              A      ++ +GL P    F  ++ GLC+ G   ++   LE+  G    P    H +
Sbjct: 256 TTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTS 315

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS-S 437
           L++  C  G                      W              KA+ L  ++V S +
Sbjct: 316 LIDGLCKKG----------------------WT------------EKAFRLFLKLVRSEN 341

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P+  TY+A + G C+      A  +  ++  Q LV ++ +Y+ L++G C+      A 
Sbjct: 342 HKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAY 401

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           ++   MS  G S +  ++N ++ GLC   +V +A ++    + +G      TY  +M   
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEH 461

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K +  +  L +  +ML  G   D+ +Y  LI     +N++K+  +FF   V+ G++P  
Sbjct: 462 CKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN 521

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           +T  S++ G      L L     ++L       DS  Y  +I+GL K+    +A  L D 
Sbjct: 522 KTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDS 581

Query: 678 MLGKGWVPDATT 689
           M+ KG VP   T
Sbjct: 582 MIEKGLVPCEVT 593



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 199/440 (45%), Gaps = 6/440 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM   G+VPN  TLN++++V  E   +E A   F  M  +G  P+S ++ +++       
Sbjct: 160 EMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIG 219

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            + ++   L  M + G  ++ + +T II     +     A+  F+ +  + L P+ + + 
Sbjct: 220 NILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFT 279

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCG 370
            +I  LC+   +  A ++LE+M+  G  P       ++ GLC+ G  +++   FL+    
Sbjct: 280 CMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRS 339

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
               P    + A++   C   K   A+ +L +M ++  + + +++   I   C+     +
Sbjct: 340 ENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFER 399

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AY+L+  M      P+  TY+A V G CK    ++A ++        L  D  +Y+ L+ 
Sbjct: 400 AYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMS 459

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+ E I +A+ +F  M K G      S+  LI   C   ++ ++      A   G   
Sbjct: 460 EHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP 519

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TYT ++ G  +       +    ++   GCA D   Y  +I  + +Q+K  +    +
Sbjct: 520 TNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLY 579

Query: 606 NVMVKAGLVPDRETMLSLLH 625
           + M++ GLVP   T ++L +
Sbjct: 580 DSMIEKGLVPCEVTRITLAY 599



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 206/508 (40%), Gaps = 98/508 (19%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
            L  F W     +F+H    Y  ++  + L GN    E  C            E +  +V
Sbjct: 98  TLSFFHWAIGYPKFRHFMRLY--IVCAMSLIGN-RNSEKAC------------EVMRCMV 142

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAG 197
            SF    R+  A+ +++ M++ G   +    N ++   V  + G  ++   +++EM   G
Sbjct: 143 ESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIK--VTSEMGLVEYAELLFEEMCVRG 200

Query: 198 IVPNVDTLNY------------------LLEVLFETNRI-------------------ES 220
           + P  D+++Y                   L V+ E   +                     
Sbjct: 201 VQP--DSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTR 258

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL  FRR+   G  PN   F  +I+GL     +  +  +L EM   G +  +  +T +I 
Sbjct: 259 ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLID 318

Query: 281 MLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
            LC++   E+A RLF K++R+ +  P+ LTY  +I+  C   +L+ A  +L  M   GL 
Sbjct: 319 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 378

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           P  + +  ++ G C+ G F+ + + +        SP    +NA++   C  G+   A  +
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKM 438

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC------------ 442
           LE      +  D  ++NI +   C+ E IR+A  L  +M+   + PD             
Sbjct: 439 LEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCR 498

Query: 443 -----------------------ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
                                   TY++ + G C+  N   A++ F ++S      DSI+
Sbjct: 499 ENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSIT 558

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           Y  ++ GLC+  K  EA  ++  M + G
Sbjct: 559 YGAIISGLCKQSKRDEARSLYDSMIEKG 586



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 197/442 (44%), Gaps = 7/442 (1%)

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C++       +L+EA+ +   M    L+P+  T   +I    E   ++ A  + E+M V 
Sbjct: 140 CMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR 199

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHNALLECCCNAGKFFLAKC 394
           G+ P    +  +V   C++G   E+  +L    + G+V       L     +GK +  + 
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259

Query: 395 I--LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           +    ++ D  +  +  ++   I  LC+   I++A+E+L  MV     P+  T+++ + G
Sbjct: 260 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 319

Query: 452 KCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
            CK    E A R+F + V +++   + ++Y+ ++ G C+ +K+  A  +   M + G   
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +++++  LI G C     ++A  L +L  S G S    TY  I+ GL K  R ++   +L
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
                 G   D   Y IL+    +Q  ++     FN M+K G+ PD  +  +L+      
Sbjct: 440 EDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRE 499

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           +++        + V    +  +  Y  +I G  +EG  + A      +   G  PD+ T+
Sbjct: 500 NRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITY 559

Query: 691 GLLV-GSSVGEEIDSRRFAFDS 711
           G ++ G     + D  R  +DS
Sbjct: 560 GAIISGLCKQSKRDEARSLYDS 581



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 144/322 (44%), Gaps = 10/322 (3%)

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM-NS 159
           MI  L   G++++   + + MV + + PNV     SL+           A R+ + +  S
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTH-TSLIDGLCKKGWTEKAFRLFLKLVRS 339

Query: 160 GGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
              K +V  +  ++ G   E+K   A+ +     M + G+VPN +T   L++   +    
Sbjct: 340 ENHKPNVLTYTAMISGYCREDKLNRAEMLL--SRMKEQGLVPNTNTYTTLIDGHCKAGNF 397

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E A D    M  +G  PN  T+  ++ GL    RV ++  +L + F  G++ +   Y  +
Sbjct: 398 ERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNIL 457

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +   C++  + +A+ LF  M  + + PD  +Y  LI   C   R+ ++    E+ + IG+
Sbjct: 458 MSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGI 517

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
            PT+  +  ++ G C  G    ++ F      +  +P    + A++   C   K   A+ 
Sbjct: 518 IPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARS 577

Query: 395 ILEKMADRKIADCDSWNIPIRW 416
           + + M ++ +  C+   I + +
Sbjct: 578 LYDSMIEKGLVPCEVTRITLAY 599



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 3/199 (1%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M+S GF  ++  +N ++  +   KRG     + + ++  + G+ P+  T N L+    + 
Sbjct: 407 MSSEGFSPNLCTYNAIVNGLC--KRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQ 464

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             I  AL  F +M K G  P+  ++  +I      +R+ +S     E   +GI      Y
Sbjct: 465 ENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTY 524

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T +I   CRE  L  A++ F  +      PD +TY  +I+ LC+  + D+A  + + MI 
Sbjct: 525 TSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIE 584

Query: 336 IGLTPTDDVFVDIVRGLCE 354
            GL P +   + +    C+
Sbjct: 585 KGLVPCEVTRITLAYEYCK 603


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 130/579 (22%), Positives = 248/579 (42%), Gaps = 15/579 (2%)

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           ER   V + LIS+   F ++  +  A+ V  N    G +  +   N +L  +VE  R   
Sbjct: 244 ERSGVVFDVLISV---FASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANR--V 298

Query: 185 DFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ----FRRMHKKGCCPNSRT 239
           +FV  V++E+   G  PN+ T   ++         ++ + Q      ++++ G  P   T
Sbjct: 299 EFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVT 358

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +   I GL     V+ ++ ++  +      L    +  +I   C+  ++ EA+++ + M+
Sbjct: 359 YSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMK 418

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           +  ++PD  +Y  LIN  C    +    D++E+M    + P+   +  ++ GLC+     
Sbjct: 419 SSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQ 478

Query: 360 ESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPI 414
            +V+         C Y ++ +  L++  C  G    A  +LE+M  +  +    S    I
Sbjct: 479 NAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLI 538

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           R   +     +A E+   M+   + PD    +  + G C+   +++AL +          
Sbjct: 539 RGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFN 598

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           L+  SY+ ++  LC+      A+E+   M K     S  +++ LI G        +A+ L
Sbjct: 599 LNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNL 658

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            +     G ++  +TYT +M       +  +   +  +M   G  LD  +Y  LI     
Sbjct: 659 FTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCN 718

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             ++K     F  M + G  P+  T   ++ G    +++ L +   +K+  DS + D   
Sbjct: 719 NREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVT 778

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           Y +LI+   K G   QA  L D+M  KG +PD  TH +L
Sbjct: 779 YTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/515 (20%), Positives = 226/515 (43%), Gaps = 9/515 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+      G+ P++ T N+LL+ L E NR+E     F  +  +G  PN  T+ I++    
Sbjct: 269 VFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYC 328

Query: 249 ANSRVD----DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           ++   D     +  ILG+++  G +  +  Y+  I  LC+   +E A+ L + +   +  
Sbjct: 329 SDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQP 388

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            +  ++ ++I   C+   + +A  +LE+M   G+ P    +  ++   C  G   + ++ 
Sbjct: 389 LNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDL 448

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCE 419
           +E+       P    + +L+   C       A  I   + A     D   +   I   C 
Sbjct: 449 MEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCM 508

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++  A +LL  M+ + +VP   +  + + G  KL  ++ AL VF  +    +  D+I+
Sbjct: 509 QGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIA 568

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            + +++G C+     EA+ +     ++G +L+  S+N +IY LC     ++A+ L     
Sbjct: 569 CNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRML 628

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                 +   Y+ ++ G  K    K  + +  +M+  G   ++  Y IL+   S  +K+ 
Sbjct: 629 KRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMH 688

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    F  M + GL  D+ +  +L+ G  +  ++    +   ++  +    +   Y  +I
Sbjct: 689 EAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +G  K      A+++ D M     +PD  T+ +L+
Sbjct: 749 DGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLI 783



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 205/524 (39%), Gaps = 70/524 (13%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           T  TY   I  L   GNVE    L +N+     P    +   +++ F     V  A++VL
Sbjct: 355 TVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVL 414

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M S G    V  +++++ A    K      + + +EM  + I P++ +   L+  L +
Sbjct: 415 EEMKSSGILPDVYSYSILINAFC-GKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCK 473

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
            N +++A+D F  +    C  +S  +E +I G      +D ++ +L E            
Sbjct: 474 KNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEE------------ 521

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
                 M+C E                 L+P   +   LI    +    D A ++   M+
Sbjct: 522 ------MICNE-----------------LVPTAFSCRSLIRGYYKLGLFDQALEVFNAML 558

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHNALLECCCNAGKFFLA 392
             G+ P       I+ G C  G F E++  LED  + G+  +PH                
Sbjct: 559 RDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPH---------------- 602

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
                           S+N  I  LC+     +A ELL RM+  +V+P    YS  + G 
Sbjct: 603 ----------------SYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGF 646

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            K  N++ A+ +F ++    +  +  +Y+ L+       K+ EA  +F  M + G  L  
Sbjct: 647 AKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQ 706

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            S+  LI G C  R++ KA  L       G S    TYT I+ G  K  R      V  +
Sbjct: 707 ISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDK 766

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           M  +    DV  Y +LI    +          ++VM   G++PD
Sbjct: 767 MNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPD 810



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/387 (21%), Positives = 154/387 (39%), Gaps = 36/387 (9%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L   N L +A+ IF  +      ++ +  Y  +I    + G+++    L + M+  
Sbjct: 467 LIHGLCKKNMLQNAVDIFHSIGASS-CKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICN 525

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                  +  SL+  +      + A+ V   M   G        N +L         F +
Sbjct: 526 ELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGY-FKE 584

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + + ++  + G   N  + N ++  L +    E AL+   RM K+   P+   +  +I 
Sbjct: 585 ALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLIS 644

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G    S    +V++   M  +GI   ++ YT ++ +    +K+ EA  +FK M+   L  
Sbjct: 645 GFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCL 704

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D+++Y  LI   C N  +  A  + E+M   G +P    +  I+ G C+  + D      
Sbjct: 705 DQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRID------ 758

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIR 424
                                    LA  + +KM  D  I D  ++ + I W  ++    
Sbjct: 759 -------------------------LATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFD 793

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLG 451
           +A++L   M    V+PD  T++  VLG
Sbjct: 794 QAHKLYDVMKDKGVLPDDITHN--VLG 818


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 136/586 (23%), Positives = 250/586 (42%), Gaps = 49/586 (8%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+++     N ++  + + KR       V++ M + G  P+V + N L++ L    + + 
Sbjct: 124 GWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 183

Query: 221 ALDQFRRMHKKG---CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           AL+    M   G   C PN  ++  +I G      VD +  +  EM   G   ++  Y+ 
Sbjct: 184 ALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSS 243

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC+   + +A  + + M    +MP+  TY  +I   C   +L++A  +L+ M   G
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           L P    ++ +++  C++G+  E+ +  +        P    ++ LL      G     +
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 363

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L+ M    I  +  ++NI I    ++  + KA      M  + + PD  +YS  +   
Sbjct: 364 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 423

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV---------------------- 490
           CK+   EDA+  F Q+ ++ L  + IS++ L+ GLC +                      
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 483

Query: 491 -------------EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
                         ++ EA + F  +   G   +  S+N LI G C + K+D++I+    
Sbjct: 484 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDR 543

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML---VEGCALDVEAYCILIQSMSE 594
             S G    + TY  ++ G  K  R +D L +  +M    V+ CA+      I++  + +
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSN---IILHGLFQ 600

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             ++      +  MV  G     ET  ++L GL + S +         L S    LD   
Sbjct: 601 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWT 660

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           +NI+IN L K G   +A  L   M+ +G VP   T+ L++ S + E
Sbjct: 661 FNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEE 706



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 142/634 (22%), Positives = 276/634 (43%), Gaps = 36/634 (5%)

Query: 70  LDNTNDLSSALKIFKWVSIQKRFQH--------TAD----------TYCKMILKLGLAGN 111
           L  T D+ S   + K + ++K+ Q         TAD          +Y  +I      G 
Sbjct: 159 LGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGE 218

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           V++   L   M+ + +P       SL+        +N A  +L +M   G   +   +N+
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278

Query: 172 VLGAIVEEKRGF------ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           ++       RG+       + V + K+M  +G+ P+V T   L++   +  R   A   F
Sbjct: 279 MI-------RGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             M +KG  PNS  + I++ G      + D   +L  M   GI  E   +  +I    + 
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 391

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             +++A+  F  MR   L PD ++Y  +I+ LC+  R++DA      M+  GL+P    F
Sbjct: 392 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMAD 401
             ++ GLC +G++ +      +       P     N +++  C  G+   A+   + +  
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 511

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +  +  S+N  I   C   ++ ++ +   RMV   + PD  TY+A + G  K    ED
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL ++R++  + +   +I+ + ++ GL Q  +I  A E++  M   G  L   ++N ++ 
Sbjct: 572 ALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 631

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC    VD+A+R+     S        T+  ++  L+K+ R  +   + + M++ G   
Sbjct: 632 GLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVP 691

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            V  Y ++I+S  E+  L++    F  M K G   D   +  ++  L +   +    + +
Sbjct: 692 HVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYL 751

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
            K+   +  +++S   +LI  + ++    +  +L
Sbjct: 752 TKIDEKNFSVEASTAALLIPIVSEKKYQKEVKFL 785


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 167/741 (22%), Positives = 299/741 (40%), Gaps = 102/741 (13%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           ++SL   ++P H+  +     D  +AL+   W+S    F+H  D+Y  ++  +     V 
Sbjct: 59  LKSLLPAITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVS 118

Query: 114 EMEGLCQNMVKERYPNVREALISLV--------------------------FSFVNHYR- 146
           ++  +  +M+K  Y       +S +                          F  V+    
Sbjct: 119 DVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQ 178

Query: 147 -VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDT- 204
                +   V+M+   F L ++V+   +G + E K+      F+ K M++AG+ P+  T 
Sbjct: 179 LYTEMLEEFVSMDIYTFNLMINVY-CKMGFVKEAKQ------FMCK-MIQAGLSPDYFTS 230

Query: 205 ------------------------------LNYLLEVLFETNRIESALDQFRRMHKKGCC 234
                                          N L+  L E  RI+ A+  F RM    C 
Sbjct: 231 TSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCY 290

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN  T+  +IKGL     V  ++ +L EM +  +  +L  Y  +I   CR   L+ A RL
Sbjct: 291 PNVYTYTALIKGL-CRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRL 349

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
             +M+   L+PD+ TY   I+ LC++ R+++A  + + +   G++    ++  ++ G C+
Sbjct: 350 LSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCK 409

Query: 355 VGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
           VGK DE+    E       SP+    NAL+   C+AG    A  + ++M    +     +
Sbjct: 410 VGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYT 469

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +NI I  + +  +   A++ L +M+ S   P   TY+AF+   C     ++A  +  Q+ 
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMK 529

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV- 528
            + +  D  +Y+ L++   ++     A +V   M    C  S  +F  LI  L   R V 
Sbjct: 530 EEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVV 589

Query: 529 ----------------------------DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
                                       D  I L       G +  +  Y K++ G+ K+
Sbjct: 590 EKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKV 649

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           +     L +L QM  EG +     +  +I    +  K  + A     M+ +G  P  E  
Sbjct: 650 ENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHC 709

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +L+ GL +  +    +S   KL       D   + ILI+G+ K+GL  + S L + M  
Sbjct: 710 KTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEK 769

Query: 681 KGWVPDATTHGLLVGSSVGEE 701
            G      T+ +L     G++
Sbjct: 770 NGCNFSPRTYSILTQKLHGKD 790


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 212/505 (41%), Gaps = 48/505 (9%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
             PNV     L+    E   +E AL  + +M      P  +   +V+ GL+   R D   
Sbjct: 124 FTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            + G+M   G    +  Y  +I   CR+    +A RLF  M    + P  + Y  LI  L
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C   R+ +A  +   M   G+ P    +  ++ G C++    +++   +           
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ----------- 287

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                              E + D  + +  ++ I I  LC+ +E+  A + L  M    
Sbjct: 288 -------------------EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           VVP+   Y+  + G CK  N  +AL +  ++    ++ D  +YS L++GLC V+++ EA 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +   M K G   ++ ++N LI G C    ++KAI + S     G      T++ ++ G 
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K  + +  + +  +M+++G   DV AY  LI    +    K+       M +AGL P+ 
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 618 ETMLSLLHGL------ADGSQLHLVSSGINKLVSDSEVLDSS-------MYNILINGLWK 664
            T+  L+ GL      +D  +L L  +G +   S +  LD S       MY  LI GL  
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCT 568

Query: 665 EGLTSQASYLLDLMLGKGWVPDATT 689
           +G   +AS     M   G  PD  T
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFT 593



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 237/527 (44%), Gaps = 22/527 (4%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K + +VF V++ A  E      + ++VY +M    ++P +   N +L+ L +  R ++  
Sbjct: 123 KFTPNVFGVLIIAFSEMGL-VEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             +  M  +G  PN  T+  +I G         +  +  EM +  I   +  YT +I  L
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C E+++ EA  +F+ MR   ++P+  TY  +++  C+   +  A ++ ++M+  GL P  
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             F  ++ GLC+  +   +  FL D   +   P    +N L++  C AG    A  +  +
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           +   +I  D  +++I I+ LC  + + +A  LL  M     +P+  TY+  + G CK  N
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            E A+ V  Q++ + +  + I++S L++G C+  K+  A+ ++  M   G      ++  
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL-VVLAQMLVE 576
           LI G        +A RL      +G      T + ++ GL K  R  D + + LA+   +
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538

Query: 577 G------------CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
                        C+ +   Y  LIQ +    ++   + FF+ M  +GL PD  T + ++
Sbjct: 539 TTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVII 598

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            G      L  V      ++    + +SS+Y +L  G  + G    A
Sbjct: 599 QGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 160/352 (45%), Gaps = 5/352 (1%)

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GL + G+FD       D      SP    +  L++ CC  G F  A  + ++M ++K
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I      + I IR LC    I +A  +   M  S ++P+  TY+  + G CK+ + + AL
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +++++    L+ + +++  L++GLC+ +++  A +    M+  G   +   +N LI G 
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C    + +A+ L S            TY+ ++ GL  + R ++   +L +M  +G   + 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LI    ++  ++      + M + G+ P+  T  +L+ G     ++        +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +V    + D   Y  LI+G +K+G T +A  L   M   G  P+  T   L+
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 120/284 (42%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N+ +  L +       +++ G MV     P+  TY   + G C+  ++  A R+F ++  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + +    + Y+ L+ GLC   +I+EA  +F  M  +G   +  ++N ++ G C +  V K
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ L       G      T+  ++ GL K          L  M   G   ++  Y  LI 
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              +   L +     + + K  ++PD  T   L+ GL    ++      + ++     + 
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++  YN LI+G  KEG   +A  +   M  KG  P+  T   L+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 23/316 (7%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG--NVEEMEGLCQNMVKERYPN 129
              +LS AL +   +   ++ +   D +   IL  GL G   +EE +GL Q M K+ +  
Sbjct: 345 KAGNLSEALSLHSEI---EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 130 VREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFV 189
                 +L+  +     +  A+ V   M   G + ++  F+ ++    +  +  A  + +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA-MGL 460

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y EMV  G++P+V     L++  F+    + A    + M + G  PN  T   +I GL  
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 250 NSRVDDSVSILGEMFDLGI--------QLELSF-------YTCIIPMLCRENKLEEAIRL 294
           + R+ D++ +   +   G         +L+ S        YT +I  LC + ++ +A + 
Sbjct: 521 DGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           F  MR   L PD  T   +I      + L D   +  D++ +G+ P   V+  + +G  E
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638

Query: 355 VGKFDESVNFLEDKCG 370
            G    ++   ED  G
Sbjct: 639 SGYLKSALRCSEDLSG 654


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 240/541 (44%), Gaps = 56/541 (10%)

Query: 163 KLSVDVFNVVLGAIVEE---KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           K SV  FN VL  I+ E    RG   + +V    +   I PN  + N +++ L +   ++
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVD 204

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A++ FR M +K C P+  T+  ++ GL    R+D++V +L EM   G       Y  +I
Sbjct: 205 RAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC++  L    +L   M      P+E+TY  LI+ LC   +LD A  +LE M+     
Sbjct: 265 DGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFL---EDKCGYVTSPH--NALLECCCNAGKFFLAKC 394
           P D  +  ++ GL +  +  +    L   E++ GY  + H  + L+      GK   A  
Sbjct: 325 PNDVTYGTLINGLVKQRRAMDGARLLISMEER-GYRLNQHIYSVLISGLFKEGKAEEAMT 383

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           + +KMA++    +   ++  I  LC   +  +A E+L  M+ S  +P+  TYS+ + G  
Sbjct: 384 LWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFF 443

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    E+A++V+R++       +   YS L++GLC V ++ EA+ V+  M   G    + 
Sbjct: 444 KTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +++ +I GLC +  +D A++L               Y +++      +  K         
Sbjct: 504 AYSSMIKGLCGIGSMDAALKL---------------YHEMLCQ----EEPKS-------- 536

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
                  DV  Y IL+  +  Q  +       N M+  G  PD  T  + L+ L++    
Sbjct: 537 -----QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEK--- 588

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                      SDS     S    L+  L K    S A  ++++MLGK   P  +T  ++
Sbjct: 589 -----------SDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMI 637

Query: 694 V 694
           V
Sbjct: 638 V 638



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/541 (23%), Positives = 238/541 (43%), Gaps = 45/541 (8%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNV---DTLNYLLEVLFETN 216
           G FKL     +  L +++E      DF  V K + +  +   V    +   +     + +
Sbjct: 71  GSFKLG----DSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAH 126

Query: 217 RIESALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS-- 273
             E A+D F RM  +  C  S ++F  V+  +I        +     + +  + + +S  
Sbjct: 127 LPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPN 186

Query: 274 --FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
              +  +I  LC+   ++ AI +F+ M     +PD  TY  L++ LC+  R+D+A  +L+
Sbjct: 187 GLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
           +M   G +P+  ++  ++ GLC+ G        +++                      FL
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDN---------------------MFL 285

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             C   ++         ++N  I  LC   ++ KA  LL RMV S  +P+  TY   + G
Sbjct: 286 KGCFPNEV---------TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K     D  R+   +  +   L+   YS L+ GL +  K  EA+ ++  M++ GC  +
Sbjct: 337 LVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPN 396

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              ++ +I GLC   K ++A  + +   SSG      TY+ +M G  K   +++ + V  
Sbjct: 397 IVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWR 456

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M   GC+ +   Y +LI  +    ++K+  + ++ M+  G+ PD     S++ GL    
Sbjct: 457 EMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIG 516

Query: 632 QLHLVSSGINKLVSDSEV---LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
            +       ++++   E     D   YNIL++GL  +   S+A  LL+ ML +G  PD  
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVI 576

Query: 689 T 689
           T
Sbjct: 577 T 577



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 157/391 (40%), Gaps = 94/391 (24%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L    DLS   K+   + ++  F +   TY  +I  L L G +++   L + MV  
Sbjct: 263 LIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV-TYNTLIHGLCLKGKLDKAVSLLERMVSS 321

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE------ 179
           +         +L+   V   R     R+L++M   G++L+  +++V++  + +E      
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEA 381

Query: 180 --------KRGFADFVFVY----------------KE----MVKAGIVPNVDTLNYLLEV 211
                   ++G    + VY                KE    M+ +G +PNV T + L++ 
Sbjct: 382 MTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKG 441

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
            F+T   E A+  +R M + GC  N   + ++I GL    RV +++ +  +M  +GI+ +
Sbjct: 442 FFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMM-----------------------------RALD 302
              Y+ +I  LC    ++ A++L+  M                             RA+D
Sbjct: 502 TVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVD 561

Query: 303 LM---------PDELT---------------------YEELINCLCENLRLDDANDILED 332
           L+         PD +T                      EEL+  L +  R+  A  I+E 
Sbjct: 562 LLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEV 621

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           M+   L P    +  IV  +C+  K + ++N
Sbjct: 622 MLGKYLAPKTSTWAMIVPEICKPKKINAAIN 652


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 227/526 (43%), Gaps = 53/526 (10%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +++ L    D S AL+ F W   +  + HT  +Y  M+  LG   ++        ++ K 
Sbjct: 82  VLQTLGFLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG-FKLSVDVFNVVLGAIVEEKRGFA 184
                   ++ L   F N         ++ N N  G F+ S+ VF +             
Sbjct: 141 S-----RGIVKLEARFFNS--------LMRNFNRAGLFQESIKVFTI------------- 174

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIV 243
                   M   G+ P+V T N LL +L +  R   A   +  M    G  P++ TF I+
Sbjct: 175 --------MKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNIL 226

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RAL 301
           I+G   N  VDD   I  ++   G + ++  Y  ++  LCR  K+  A  + K M  +++
Sbjct: 227 IRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSV 286

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           DL P+ +TY  LI   C    ++ A  + E+M+  GL   +  +  +++GLCE  KF++ 
Sbjct: 287 DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346

Query: 362 VNFLEDKCGYVT-SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
            + LE   G  T SP     N L+ C C+AG    A  + E+M++ KI  D  +++  +R
Sbjct: 347 KDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVR 406

Query: 416 WLCENEEIRKAYELLGRMVVSSVV-------PDCATYSAFVLGKCKLCNYEDALRVFRQV 468
            LC+     KA +LL +++   ++       P  A Y+      C+    + A + FRQ+
Sbjct: 407 SLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQL 466

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    D  SY  L+ G C+        E+   M +        ++  LI GL  M K 
Sbjct: 467 MRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKP 525

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
             A++       S     +ST+  I+  L++  RA +   ++  ML
Sbjct: 526 LLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLML 571



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 192/430 (44%), Gaps = 17/430 (3%)

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++LE  F+  ++    R    +E+I++F +M++  + P  +T+  L+  L +  R + A 
Sbjct: 145 VKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAK 204

Query: 328 DILEDMI-VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
            + ++M+   G+TP    F  ++RG C  G  D+      D   +   P    +N L++ 
Sbjct: 205 KVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDG 264

Query: 383 CCNAGKFFLAKCILEKMADRKI---ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            C AGK  +A  +++ M  + +    +  ++   IR  C   EI KA  +   MV   + 
Sbjct: 265 LCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLK 324

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ-SLVLDSISYSKLVEGLCQVEKITEAVE 498
            +  TY+  + G C+   +E    +    +   +   D+ +++ L+   C    + +A++
Sbjct: 325 ANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALK 384

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-------IRLRSLAYSSGTSYTTSTYT 551
           VF  MS+      S++++ L+  LC     +KA       +  + L    G     + Y 
Sbjct: 385 VFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYN 444

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I   L +  + K       Q++  G   D  +Y  LI    ++   +       +M++ 
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRK 503

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
              PD ET  SL++GL    +  L    + K++  S   +SS ++ ++  L ++G  S++
Sbjct: 504 DFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASES 563

Query: 672 SYLLDLMLGK 681
           + L+ LML K
Sbjct: 564 ASLIQLMLDK 573



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 33/307 (10%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY---- 127
           +  +L  ALK+F+ +S + + Q  + TY  ++  L   G+ E+ E L   +++ +     
Sbjct: 375 HAGNLDDALKVFERMS-ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433

Query: 128 ----PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE--K 180
               P V  A  + +F ++    +   A +    +   G +       +++G   E   +
Sbjct: 434 DGCKPLV--AAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFE 491

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
            G+   V     M++    P+ +T   L+  L   ++   AL    +M +    PNS TF
Sbjct: 492 SGYELLVL----MLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L+   R  +S S++  M D  I+  LSF T  + +L      ++A +L  ++  
Sbjct: 548 HSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYG 607

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD------IVRGLCE 354
                  +  EELI  LC          +++   ++  +     FVD      ++  LCE
Sbjct: 608 KGY---SVKMEELIRYLCH------CRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCE 658

Query: 355 VGKFDES 361
           + K  E+
Sbjct: 659 INKLSEA 665



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 111/298 (37%), Gaps = 53/298 (17%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-------GCCPNS 237
           D + V++ M +  I P+  T + L+  L +    E A D   ++ ++       GC P  
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             +  + K L    +   +     ++   G Q   S+ T I+   C+E   E    L  +
Sbjct: 441 AAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGH-CKEGTFESGYELLVL 499

Query: 298 MRALDLMPDELTYEELINCLCENLRLDD---ANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           M   D  PD  TYE LIN L   L +D    A   LE M+     P    F  I+  L E
Sbjct: 500 MLRKDFXPDFETYESLINGL---LHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLE 556

Query: 355 VGKFDESVNFLE---------------------------DKC----------GYVTSPHN 377
            G+  ES + ++                           DK           GY +    
Sbjct: 557 QGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGY-SVKME 615

Query: 378 ALLECCCNAGKFFL-AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            L+   C+  K    +K +L  +   +  D D  N  I  LCE  ++ +A+ L  ++V
Sbjct: 616 ELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLV 673


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 157/674 (23%), Positives = 288/674 (42%), Gaps = 76/674 (11%)

Query: 50  YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           +E +++ L  +L+P  +  VL +  D  +AL+ F W     R++H +  Y  M+      
Sbjct: 200 FEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVML------ 253

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
             +     LCQ                            GA R+L  M     +L  + F
Sbjct: 254 -EILSKTKLCQ----------------------------GAKRILRLMTRRRIQLCPEAF 284

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             V+ +     R   D + V   M KAG+ PN+   N  + +L   N ++ AL    RM 
Sbjct: 285 GFVMVSYSRAGR-LRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMV 343

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G  PN  T+  +IKG     +VD ++ ++ +M   G   +   Y  ++ +LCR+ +L 
Sbjct: 344 LIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLN 403

Query: 290 EAIRLFKMMRA-LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           E   L K M+    L+PD +TY  LI  L ++   D+A +IL++                
Sbjct: 404 EIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEA--------------- 448

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                      E + F  DK  Y     +A++   C  GK   AK ++ +M  +    D 
Sbjct: 449 -----------EKLRFKVDKVEY-----SAIVHAYCKEGKIQKAKELVSEMFSKGCDPDV 492

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   +   C   ++ +A +++ +M      P+  TY+ F+ G C+     +A ++   
Sbjct: 493 VTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNM 552

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
              +    ++I+YS +V GL +  K+ EA +V   M   G   +    N+L++ LC   K
Sbjct: 553 SEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGK 612

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
             +A +L     + G +     +T ++ G  +    +  L +L  M +     D   Y  
Sbjct: 613 PREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTA 672

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI ++++ +++++       M++ GLVP   T  S++H      ++  +   + K++  S
Sbjct: 673 LIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKS 732

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSR 705
                + YN++I  L K G   +A+ LL  +L      DA T  +L+ S  +VG  + + 
Sbjct: 733 RF--QTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAY 790

Query: 706 RFA---FDSSSFPD 716
           + A   F+ +  PD
Sbjct: 791 KVACRMFNRNLIPD 804



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 9/165 (5%)

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           Q AK +L ++ +  ++ C    EA+  ++ S S   +L+D      +M KAG+ P+    
Sbjct: 263 QGAKRILRLMTRRRIQLCP---EAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSIC 319

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            + +H L  G++L        ++V      +   YN LI G        QA  L+D M  
Sbjct: 320 NTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPS 379

Query: 681 KGWVPDATTH----GLLVGSSVGEEIDS--RRFAFDSSSFPDSVS 719
           KG  PD  ++    GLL       EI    ++   DS   PD V+
Sbjct: 380 KGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVT 424


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 153/617 (24%), Positives = 258/617 (41%), Gaps = 83/617 (13%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           +T+ E+ + SL  ++S     +VL        A + F W S +  F H + +Y  M+  L
Sbjct: 11  STELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWAS-RNGFAHDSRSYFMMLDIL 69

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G  GN+                      I+  F F    R NG++++             
Sbjct: 70  GRNGNLN---------------------IARNFLFSIERRSNGSVKI------------E 96

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           D F   L         F + + ++  M  +G+ P+V T N LL +L +  R   A   F 
Sbjct: 97  DRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFD 156

Query: 227 RM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
            M    G  P++ TF I+I+G   NS VD+      EM     + ++  Y  ++  LCR 
Sbjct: 157 EMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 216

Query: 286 NKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
            K+  A  + K M  +  DL PD +TY  L+   C    +D+A  + E+M+  GL P D 
Sbjct: 217 GKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDI 276

Query: 344 VFVDIVRGLCEVGKFDE----------SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
            +  +++GLCEV KFD+             F+ D C Y     N L+   C+AG F  A 
Sbjct: 277 TYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTY-----NTLMNAQCDAGNFDEAL 331

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV-------PDCATY 445
            + +KM + K+  D  ++++ IR LC+  +  +A +L  ++    ++       P  A Y
Sbjct: 332 KMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAY 391

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +      CK      A RVFRQ+  +    D  SY  L+ G C+        ++   M +
Sbjct: 392 NPIFDFLCKNGKTHKAERVFRQLMKKG-TQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLR 450

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY--TTSTYTKIMLGLVK--LQ 561
                   ++ +LI G   ++K +  +  ++L     +SY   TS +  I+  L+K    
Sbjct: 451 RDYVPDFETYVLLINGF--LQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFA 508

Query: 562 RAKDLLVVL---------------AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
           R     VVL                  L+ G  L ++A+ I ++ + +   + D      
Sbjct: 509 RESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQI-VELLYDNGYMVDMEELIG 567

Query: 607 VMVKAGLVPDRETMLSL 623
            + + G + D + MLS 
Sbjct: 568 FICQNGKLLDAQKMLSF 584



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/481 (21%), Positives = 216/481 (44%), Gaps = 22/481 (4%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM---FDLGIQLELSFYTC 277
           A + F    + G   +SR++ +++  L  N  ++ + + L  +    +  +++E  F   
Sbjct: 43  AFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNT 102

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI-VI 336
           ++          EAI+LF +M++  + P  +T+  L+  L +  R + A+ + ++M    
Sbjct: 103 LLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY 162

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G+TP    F  ++RG C+    DE   F ++   +   P    +N L++  C AGK  +A
Sbjct: 163 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 222

Query: 393 ----KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
               K +++KM D    D  ++   +R  C  +EI +A  +   MV   + P+  TY+  
Sbjct: 223 HNVVKGMVKKMKDLS-PDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTL 281

Query: 449 VLGKCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           + G C++  ++    +    V  +  V D+ +Y+ L+   C      EA+++F  M +  
Sbjct: 282 IKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELK 341

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRS-------LAYSSGTSYTTSTYTKIMLGLVKL 560
               S+++++LI  LC     ++A +L         L    G +   + Y  I   L K 
Sbjct: 342 VQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKN 401

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            +      V  Q++ +G   D  +Y  LI    ++   +        M++   VPD ET 
Sbjct: 402 GKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETY 460

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           + L++G     +  L    + +++  S +  +S+++ +++ L K     +++  + LM+ 
Sbjct: 461 VLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMID 520

Query: 681 K 681
           +
Sbjct: 521 R 521



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 171/434 (39%), Gaps = 22/434 (5%)

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM--IVIGLTPTDDVFVD 347
           +A   F          D  +Y  +++ L  N  L+ A + L  +     G    +D F +
Sbjct: 42  KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCN 101

Query: 348 -IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++R     G F+E++           SP     N+LL      G+  +A  + ++M   
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 161

Query: 403 K--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
                D  ++NI IR  C+N  + + +     M   +  PD  TY+  V G C+      
Sbjct: 162 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRI 221

Query: 461 ALRVFRQV--SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           A  V + +    + L  D ++Y+ LV G C  ++I EA+ VF  M   G   +  ++N L
Sbjct: 222 AHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTL 281

Query: 519 IYGLCVMRKVDKAIRLRSLAYSS-GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           I GLC ++K DK   +   A    G    T TY  +M          + L +  +M    
Sbjct: 282 IKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELK 341

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFN-------VMVKAGLVPDRETMLSLLHGLADG 630
              D   Y +LI+++ ++   +     F+       ++   G  P       +   L   
Sbjct: 342 VQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKN 401

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            + H       +L+      D   Y  LI G  KEG       LL  ML + +VPD  T+
Sbjct: 402 GKTHKAERVFRQLMKKG-TQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETY 460

Query: 691 GLLVGSSV--GEEI 702
            LL+   +  GE I
Sbjct: 461 VLLINGFLQKGEPI 474



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 21/297 (7%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY---- 127
           +  +   ALK+FK +  + + Q  + TY  +I  L   G+ E  E L   +  E      
Sbjct: 323 DAGNFDEALKMFKKMK-ELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRD 381

Query: 128 ----PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE--K 180
               P V  A  + +F F+  + + + A RV   +   G +       +++G   E   +
Sbjct: 382 DGCTPLV--AAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFE 439

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
            G+   +F    M++   VP+ +T   L+    +      A     RM K    P +  F
Sbjct: 440 AGYKLLLF----MLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVF 495

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L+ N    +S S +  M D  I+  ++  T  + +L       +A ++ +++  
Sbjct: 496 HSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYD 555

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
              M D    EELI  +C+N +L DA  +L   +  G     +V   ++ GLC++ +
Sbjct: 556 NGYMVD---MEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKR 609


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 202/464 (43%), Gaps = 39/464 (8%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN  TF ++I GL    R+ ++V    +M +      L     ++  LC+  K+++A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV-IGLTPTDDVFVDIVRGLC 353
           F   R +   P  +T   LIN  CE   LD A ++  +M     L P    +  I++  C
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
           ++ + D++   LE+               CC++                   D  +    
Sbjct: 118 KMDRLDQARQLLEESS-------------CCSS-------------------DVIAITSV 145

Query: 414 IRWLCENEEIRKAYELLGRMV-VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            R  C+ + + +AY+LL  MV   S  PD   ++  + G CK     +A  +   + +  
Sbjct: 146 ARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG 205

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS--SFNILIYGLCVMRKVDK 530
            V ++++Y+ L++G C+   ++EA+++F  +S        +  +FN LI GLC   +++ 
Sbjct: 206 CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEH 265

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A  L     +      T TYT +M GL K  R  ++  V  +ML EGC   V  Y  L+ 
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
           +  +   L+D       MV  G+ PD  T   LL GL +  ++   +    K++ +    
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            + +Y+ L+ G  K  L  +A      ML +   PD  T  LLV
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 197/467 (42%), Gaps = 90/467 (19%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN  T + L+  L +  R+  A++ + +M ++ C PN R   +++  L    ++D +++I
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 260 LGEMFDLGIQLELSFYT--CIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINC 316
                  GIQ   S  T   +I   C    L++A+ LF +M +   L+P+  TY  +I C
Sbjct: 61  FR-----GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 317 LCENLRLDDANDILEDMI-----VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            C+  RLD A  +LE+       VI +T        + RG C+  + DE+   L D    
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAIT-------SVARGFCKAQRVDEAYQLLLD---- 164

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYEL 429
                                      M ++K A  D  +WN+ I   C+   +R+AYE+
Sbjct: 165 ---------------------------MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEM 197

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR----------------------- 466
           L  +V    VP+  TY+  + G CK  N  +AL++F+                       
Sbjct: 198 LETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGL 257

Query: 467 --------------QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                         Q+ A+ L  D+ +Y+ L++GLC+  + +E   VF  M + GC+ S 
Sbjct: 258 CKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSV 317

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++  L++  C    +  A ++     + G     +TYT ++ GL +  + +       +
Sbjct: 318 VTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEK 377

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           +L E C      Y  L++   +   + +   ++  M+   L PD  T
Sbjct: 378 ILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/438 (20%), Positives = 177/438 (40%), Gaps = 81/438 (18%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F+V++  + +  R   + V  Y +M++   VPN+  +N LL  L +  +++ A+  FR +
Sbjct: 6   FSVLIAGLCKAGR-LGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI 64

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENK 287
               C P+  T  I+I G      +D ++ +  EM  +  +  E + YT II   C+ ++
Sbjct: 65  Q---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 288 LEEAIRLFK----------------------------------MMRALDLMPDELTYEEL 313
           L++A +L +                                  M+      PD + +  +
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGY 371
           I+  C+  R+ +A ++LE ++ +G  P    +  ++ G C+ G   E++   +      +
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
              P+    NAL+   C A +   A  ++++M  R + AD  ++   +  LC+     + 
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD---------- 476
             +   M+     P   TY+  V   CK  + +DA +V R + A+ +  D          
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361

Query: 477 -------------------------SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
                                    ++ YS LV G C+   + EAV+ +  M     +  
Sbjct: 362 LFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPD 421

Query: 512 SSSFNILIYGLCVMRKVD 529
            ++  +L+  LC   + D
Sbjct: 422 PATCKLLVEMLCKRGRTD 439



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 6/219 (2%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTAD---TYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
            + +LS AL++FK +S   R  H      T+  +I  L  A  +E    L + M      
Sbjct: 222 KSGNLSEALQLFKVLS--SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLR 279

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
                  +L+       R +   RV   M   G   SV  +  ++ A  +      D   
Sbjct: 280 ADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG-SLQDAQQ 338

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V + MV  GI P+V T   LLE LFE  ++ +A + F ++ ++ C P +  +  +++G  
Sbjct: 339 VIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCC 398

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
             + VD++V    EM D  +  + +    ++ MLC+  +
Sbjct: 399 KAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 1/195 (0%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V  FN ++  + +  R    F  V K+M    +  +  T   L++ L +  R       
Sbjct: 246 NVVTFNALISGLCKADRLEHAFELV-KQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F  M ++GC P+  T+  ++        + D+  ++  M   GI  +++ YT ++  L  
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             K+  A   F+ +      P  + Y  L+   C+   +D+A     +M+   L P    
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424

Query: 345 FVDIVRGLCEVGKFD 359
              +V  LC+ G+ D
Sbjct: 425 CKLLVEMLCKRGRTD 439


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 220/501 (43%), Gaps = 37/501 (7%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +K+M+ AG  P V T N +++ + +   +E+A   F  M  +G  P++ T+  +I G   
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             R+DD+V    EM D+  + ++  Y  +I   C+  KL   +  ++ M+   L P+ ++
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++  C+   +  A     DM  +GL P +  +  ++   C++G   ++        
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA-------- 289

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
                              F L   +L+   +  +    ++   I  LC+ E +++A EL
Sbjct: 290 -------------------FRLGNEMLQVGVEWNVV---TYTALIDGLCDAERMKEAEEL 327

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
            G+M  + V+P+ A+Y+A + G  K  N + AL +  ++  + +  D + Y   + GLC 
Sbjct: 328 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 387

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           +EKI  A  V   M + G   +S  +  L+          + + L           T  T
Sbjct: 388 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 447

Query: 550 YTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
           +  ++ GL K   + +A D    ++     G   +   +  +I  + + N+++     F 
Sbjct: 448 FCVLIDGLCKNKLVSKAVDYFNRISNDF--GLQANAAIFTAMIDGLCKDNQVEAATTLFE 505

Query: 607 VMVKAGLVPDRETMLSLLHG-LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
            MV+ GLVPDR    SL+ G    G+ L  ++   +K+      LD   Y  L+ GL   
Sbjct: 506 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR-DKMAEIGMKLDLLAYTSLVWGLSHC 564

Query: 666 GLTSQASYLLDLMLGKGWVPD 686
               +A   L+ M+G+G  PD
Sbjct: 565 NQLQKARSFLEEMIGEGIHPD 585



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 237/559 (42%), Gaps = 57/559 (10%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI---------------VPN 201
           M   GFK SV+ + +V   I+   R + D   V KEMV +                 VP 
Sbjct: 1   MTRNGFKHSVESYCIV-AHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 59

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
               + L  VL +   +E A+  F +M +    P +R+   ++       + DD      
Sbjct: 60  FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 119

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           +M   G +  +  Y  +I  +C+E  +E A  LF+ M+   L+PD +TY  +I+      
Sbjct: 120 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID------ 173

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HN 377
                                        G  +VG+ D++V F E+       P    +N
Sbjct: 174 -----------------------------GFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 204

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           AL+ C C  GK  +      +M    +  +  S++  +   C+   +++A +    M   
Sbjct: 205 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 264

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            +VP+  TY++ +   CK+ N  DA R+  ++    +  + ++Y+ L++GLC  E++ EA
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            E+F  M   G   + +S+N LI+G    + +D+A+ L +     G       Y   + G
Sbjct: 325 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 384

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L  L++ +   VV+ +M   G   +   Y  L+ +  +     +     + M +  +   
Sbjct: 385 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 444

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLL 675
             T   L+ GL     +       N++ +D  +  +++++  +I+GL K+     A+ L 
Sbjct: 445 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 504

Query: 676 DLMLGKGWVPDATTHGLLV 694
           + M+ KG VPD T +  L+
Sbjct: 505 EQMVQKGLVPDRTAYTSLM 523


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 133/646 (20%), Positives = 267/646 (41%), Gaps = 53/646 (8%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           E K++ L   L P  +  VL + +D   AL  F W   Q R++H    YC M+       
Sbjct: 38  EGKMRHLLRGLKPRLVCAVLLSQSDERVALDFFFWSDRQWRYRHDPIVYCVML------- 90

Query: 111 NVEEMEGLCQNMVK----------ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSG 160
           +V     LCQ   +          +R P   +    ++ S+    ++  AM+VL  M   
Sbjct: 91  DVLSKTKLCQGARRVLRLMVRRGIQRTP---QDFCCVMVSYSRAGKLRNAMQVLTMMQKA 147

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G + ++ V N  +  +V          F+ + M   GI+PNV T N L++   + +R+E 
Sbjct: 148 GIEPNLLVCNTAIHVLVMANMLEKALRFL-ERMQLLGIMPNVVTYNCLIKGYCDLHRVED 206

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A++    M  KGC P+  ++  V+  L  N R+ + + ++ +M D  +  +   Y  +I 
Sbjct: 207 AMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIH 266

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           MLC+    +EA++  +  +      D++ Y  +++  C+  R+D A +I+ +M   G  P
Sbjct: 267 MLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIP 326

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
               +  I+ G  + G+  ++   L+    +   P+                        
Sbjct: 327 DVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTV---------------------- 364

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
                   S+   ++ LC+     +A E++         P+  TYS  + G  +     D
Sbjct: 365 --------SYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSD 416

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  V R++  +      +  + L++ LC++ ++ EA +        GC++++ +F  +I+
Sbjct: 417 ACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIH 476

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
             C    ++ A+ L    Y S       TYT I+  L K  R ++   +  +ML +G   
Sbjct: 477 RFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDP 536

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
               Y  +I    +  +++D     + M+       R     ++  L     L      +
Sbjct: 537 TPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQEC--RTAFNQVIEKLCTFGNLEAADKLL 594

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            K++  +  +D++  ++L+    ++G+   A  +   M  +  +PD
Sbjct: 595 GKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPD 640



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/570 (21%), Positives = 245/570 (42%), Gaps = 41/570 (7%)

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           R+P VRE    +      ++++ G MR L+     G K  + V  V+L     ++R   D
Sbjct: 16  RHPLVREICRLIECRSAWNHKLEGKMRHLLR----GLKPRL-VCAVLLSQ--SDERVALD 68

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
           F F      +    P V  +  +L+VL +T   + A    R M ++G     + F  V+ 
Sbjct: 69  FFFWSDRQWRYRHDPIVYCV--MLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMV 126

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
                 ++ +++ +L  M   GI+  L      I +L   N LE+A+R  + M+ L +MP
Sbjct: 127 SYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMP 186

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + +TY  LI   C+  R++DA +++ +M + G +P    +  ++  LC+  +  E ++  
Sbjct: 187 NVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMD-- 244

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
                                        ++EKM D K+ AD  ++N  I  LC+++   
Sbjct: 245 -----------------------------VIEKMEDTKLLADQVTYNTLIHMLCKHQHAD 275

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A + L          D   YSA V   CK    + A  +  ++  +  + D ++Y+ ++
Sbjct: 276 EALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAII 335

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G  Q  ++ +A ++   M K+GC  ++ S+   + GLC      +A  +   +     +
Sbjct: 336 NGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWT 395

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY+ +M G  +  +  D   V+ +M+ +G         +L+QS+    ++ +   F
Sbjct: 396 PNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKF 455

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
               +  G   +     +++H       +    S ++ +   ++  D+  Y  +I+ L K
Sbjct: 456 MEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGK 515

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +G   +A+ L   ML KG  P   T+  ++
Sbjct: 516 KGRIEEATELTLKMLKKGIDPTPVTYRTVI 545



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 10/303 (3%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I  L     + KA   L RM +  ++P+  TY+  + G C L   EDA+ +  ++  
Sbjct: 157 NTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPL 216

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           +    D +SY  ++  LC+  +I E ++V   M          ++N LI+ LC  +  D+
Sbjct: 217 KGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADE 276

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A++    A   G       Y+ I+    K  R      ++ +M   GC  DV  Y  +I 
Sbjct: 277 ALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIIN 336

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE-- 648
             S+  ++         M K G  P+  +  + L GL         SS   +++  SE  
Sbjct: 337 GFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGN----SSEAREMMKASEEQ 392

Query: 649 --VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDS 704
               ++  Y+++++G  +EG  S A  ++  M+GKG+ P      LL+ S   +G   ++
Sbjct: 393 WWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEA 452

Query: 705 RRF 707
           ++F
Sbjct: 453 KKF 455


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 151/670 (22%), Positives = 284/670 (42%), Gaps = 38/670 (5%)

Query: 34  PLSSETDMIKSHQTTDYEAKIQSLRHNLSP-------DHLIRVLDN-TNDLSSALKIFKW 85
           P  S+TD+++   TT     ++  R  L P        HLI VL N  ND    L +F W
Sbjct: 43  PSISDTDLVRRVTTTLKRRHLEPFRRVLKPYESRFKPSHLIWVLINLKNDYPLVLNLFNW 102

Query: 86  V--SIQKRFQHTADTYCKMILKLGLAGN--------VEEMEGLCQNMVKERYPNVREALI 135
                Q++F  T ++ C +++ L +A N        V E     +  V + +    E LI
Sbjct: 103 AKSQSQQQFHPTLESLC-IVVHLSVASNDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLI 161

Query: 136 ---------SLVFSFVNHYRV-NG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
                     LVF       V NG    A ++   +   G  +SVD  N+ L  +     
Sbjct: 162 YTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFE 221

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           G    V V++E  + G+  N  + N +L  L +  ++  A +   +M  +G  P+  ++ 
Sbjct: 222 GIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYG 281

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           +V+ G      +D  + ++ E+   G++ +   Y  II +LC+  ++ EA +L + MR  
Sbjct: 282 VVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW 341

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + PD + Y  +I+  C+   +  A  + ++M    + P    +  ++ G+C+ GK  E+
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
                +       P    + AL++  C AG+   A  +  +M  + +  +  ++      
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+N EI  A ELL  M    + P+  TY+  V G CK+ N E  +++  ++       D
Sbjct: 462 LCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           +I+Y+ L++  C++ ++ +A E+   M       +  +FN+L+ G C+   ++   RL  
Sbjct: 522 TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIE 581

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G     +T+  +M         +    +   M   G   D   Y ILI+   +  
Sbjct: 582 WMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKAR 641

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            +K+       MV+ G      T  +L+ G     +         ++     V +  +Y+
Sbjct: 642 NMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYD 701

Query: 657 ILINGLWKEG 666
           I ++  ++EG
Sbjct: 702 IFVDVNYEEG 711



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/496 (21%), Positives = 216/496 (43%), Gaps = 41/496 (8%)

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML-CRENKLEEAIRLFKMM 298
           F++  + L+ N  V ++  +  ++   G+ + +      +  L C    ++ A+++F+  
Sbjct: 174 FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEF 233

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
             L +  + ++   +++CLC+  ++ +A+++L  M   G  P    +  +V G C +G+ 
Sbjct: 234 PELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGEL 293

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
           D+ +  +++  G    P    +N ++   C  G+   A+ +L  M    +  D   +   
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I   C+   +  A +L   M    +VPD  TY++ + G CK     +A  +F ++  + L
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D ++Y+ L++G C+  ++ EA  V   M + G + +  ++  L  GLC   ++D A  
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L       G      TY  I+ GL K+   +  + ++ +M + G   D   Y  L+ +  
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG------LADGSQL--HLVSSGI----- 640
           +  ++        +M+   L P   T   L++G      L DG +L   ++  GI     
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593

Query: 641 ------------NKLVSDSEVL----------DSSMYNILINGLWKEGLTSQASYLLDLM 678
                       N + + +E+           DS+ YNILI G  K     +A +L   M
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653

Query: 679 LGKGWVPDATTHGLLV 694
           + KG+   A T+  L+
Sbjct: 654 VEKGYSVTAATYDALI 669


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/516 (22%), Positives = 230/516 (44%), Gaps = 20/516 (3%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRI--ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           + G+ P++   N +L  L  +     +++LD FR + +    PN  TF +++    +   
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + D+++ L  M   G+  +   Y  ++   CR+  L EA  L   M+   + P + TY  
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++       +  A  ++E M   G  P    +  +  GLC+ GK DE+    ++     
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 373 TS-----PHNALLECCCNAGKFFLAKC------ILEKMADRKIADC-DSWNIPIRWLCEN 420
           T+      +N L++ C      F  +C      +LE+M D+ +     + NI ++ LC+ 
Sbjct: 344 TALPDVVTYNTLVDAC------FKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            ++ +A   L ++    + PD  TY+  +   CK  N   A  +  ++  + L +D+ + 
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++  LC++++  +A E+     + G      S+  ++         + A+RL      
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                + STY  ++ GL +++R K+ +  L + + +G   D   Y I+I +  ++  L++
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLEN 577

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              F N MV+    PD  T  +L++GL    +L          V   + +D   YN LI 
Sbjct: 578 AFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQ 637

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            + K G    A +  D M  KG  PDA T+ +++ +
Sbjct: 638 SMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 234/554 (42%), Gaps = 44/554 (7%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           K   AD +     M   G+ P+  T N LL        +  A     RM + G  P   T
Sbjct: 221 KGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPT 280

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++        +  +  ++  M   G + +L  Y  +   LC+  K++EA RL   M 
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEME 340

Query: 300 ALDL-MPDELTYEELINCLCENLRLD-DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            L   +PD +TY  L++  C   R   DA  +LE+M   G+ PT      +V+ LC+ GK
Sbjct: 341 RLGTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
            +E++  LE       +P    +N L++  C AG    A  ++++M  + +  D  + N 
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            +  LC+ +    A ELL        VPD  +Y   +    K  N E ALR++ Q+  + 
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L+    +Y+ L++GLC++E++ EA++      + G     +++NI+I+  C    ++ A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           R  +    +       T   +M GL    +    L +    + +G  +DV  Y  LIQSM
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSM 639

Query: 593 SEQNKLKDCALFFNVMVKAGLVPD----------------RETMLSLLHGLADGSQLHLV 636
            +   +     FF+ M   GL PD                 E   ++LH LAD  +L   
Sbjct: 640 CKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699

Query: 637 ------------------SSGINKLVSDSEVLDSSM--YNILINGLWKEGLTSQASYLLD 676
                               G  +  S  +  D+++  Y   +NGL   G   +A  +LD
Sbjct: 700 FACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLD 759

Query: 677 LMLGKGWVPDATTH 690
            M+ KG   D +T+
Sbjct: 760 EMMQKGMPVDCSTY 773



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 136/594 (22%), Positives = 239/594 (40%), Gaps = 90/594 (15%)

Query: 143 NHYRVN-------------GAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFADFV 187
           NHY  N              A+  L  M   GF LS D   +N +L A    K    +  
Sbjct: 207 NHYTFNLLVHTHCSKGTLADALATLSTMQ--GFGLSPDAVTYNTLLNAHCR-KGMLGEAR 263

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +   M + GI P   T N L+        I+ A      M   G  P+ RT+ ++  GL
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGL 323

Query: 248 IANSRVD------------------------------------DSVSILGEMFDLGIQLE 271
               +VD                                    D++ +L EM D G++  
Sbjct: 324 CQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           L  +  ++  LC+E KLEEA+   + +    L PD +TY  LI+  C+   +  A  +++
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAG 387
           +M+  GL         ++  LC++ +++++   L      G+V     +  ++       
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 388 KFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  + ++M +RK I    ++N  I+ LC  E +++A + L   V   +VPD  TY+
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             +   CK  + E+A R   ++   S   D ++ + L+ GLC   K+ +A+++F    + 
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G  +   ++N LI  +C +  VD A+         G      TY  ++  L +  R+++ 
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMS----------------EQNKLKDCALFFNVMVK 610
             +L + L +   L     C L++  S                   K +D AL       
Sbjct: 684 HNMLHK-LADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL------- 735

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
                  ET +  L+GL  G QL    + +++++     +D S Y  L+ GL K
Sbjct: 736 -------ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/511 (19%), Positives = 212/511 (41%), Gaps = 45/511 (8%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRV 153
           T  TY  ++      G +++   + ++M    + P++R   + L        +V+ A R+
Sbjct: 277 TQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV-LAMGLCQAGKVDEAFRL 335

Query: 154 LVNMNSGGFKLS-VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
              M   G  L  V  +N ++ A  +  R  +D + + +EM   G+ P + T N +++ L
Sbjct: 336 KDEMERLGTALPDVVTYNTLVDACFKW-RCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL 394

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +  ++E AL +  ++ ++G  P+  T+  +I        V  + +++ EM   G++++ 
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDT 454

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
                ++  LC+  + E+A  L         +PDE++Y  ++    +    + A  + + 
Sbjct: 455 FTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQ 514

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECCCNAGK 388
           MI   L P+   +  +++GLC + +  E+++    F+E       + +N ++   C  G 
Sbjct: 515 MIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGD 574

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A     KM +     D  + N  +  LC + ++ KA +L    V      D  TY+ 
Sbjct: 575 LENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNT 634

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   CK+ + + AL  F  +  + L  D+ +Y+ ++  L +  +  EA  +   ++ +G
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694

Query: 508 -------CSLSSSS-----------------------------FNILIYGLCVMRKVDKA 531
                  C L   S                             +   + GLC   ++ +A
Sbjct: 695 KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEA 754

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
             +       G     STY  +M GL+K Q+
Sbjct: 755 KAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 105/514 (20%), Positives = 197/514 (38%), Gaps = 76/514 (14%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV--DDSVSILGEMFDLGIQLELSFYTCII 279
           L   RR  ++G  P+ +    V+  L  +       S+ +   + +L +      +  ++
Sbjct: 158 LHSLRR--RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLV 215

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              C +  L +A+     M+   L PD +TY  L+N  C    L +A  +L  M   G+ 
Sbjct: 216 HTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIA 275

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           PT   +  +V     +G   ++   +E    Y   P                        
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP------------------------ 311

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM-VVSSVVPDCATYSAFVLGKCKLCNY 458
                 D  ++N+    LC+  ++ +A+ L   M  + + +PD  TY+  V    K    
Sbjct: 312 ------DLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCS 365

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            DALR+  ++  + +    ++++ +V+ LC+  K+ EA+     +++ G +    ++N L
Sbjct: 366 SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I   C    V KA  L       G    T T   ++  L K++R +D   +L      G 
Sbjct: 426 IDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGF 485

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D  +Y  ++ +  ++   +     ++ M++  L+P   T                   
Sbjct: 486 VPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST------------------- 526

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
                           YN LI GL +     +A   L+  + KG VPD TT+ +++ +  
Sbjct: 527 ----------------YNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYC 570

Query: 699 GEEIDSRRFAF-----DSSSFPDSVS-DILAEGL 726
            E      F F     ++S  PD V+ + L  GL
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 152/650 (23%), Positives = 278/650 (42%), Gaps = 45/650 (6%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           ++S     +E ++++L  +L P  +  VL + +D   ALK F W   Q R++H    Y  
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYS 212

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           M+        V     LCQ                            G+ RVLV M   G
Sbjct: 213 ML-------EVLSKTKLCQ----------------------------GSRRVLVLMKRRG 237

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
              + + F+ V+ +     +   D + V   M +AG+ PN+   N  ++V    NR+E A
Sbjct: 238 IYRTPEAFSRVMVSYSRAGQ-LRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCIIP 280
           L    RM   G  PN  T+  +I+G     RV++++ +L +M   G +  ++S+YT I+ 
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT-IMG 355

Query: 281 MLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
            LC+E ++ E   L  KM +   L+PD++TY  LI+ L ++   D+A   L+D    G  
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFL-EDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
                +  IV  LC+ G+  E+ + + E  C      + A++   C  G+   AK +L+ 
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 475

Query: 399 MADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M       +  S+   +  +C   +  +A E++         P+  TYS  + G  +   
Sbjct: 476 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 535

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF-CCMSKNGCSLSSSSFN 516
             +A  V R++  +      +  + L++ LC+  +  EA +    C++K GC+++  +F 
Sbjct: 536 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK-GCAINVVNFT 594

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +I+G C   ++D A+ +    Y         TYT ++  L K  R  +   ++ +ML +
Sbjct: 595 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 654

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G       Y  +I    +  K+ D       M+       R     ++  L    +L   
Sbjct: 655 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQVIEKLCVLGKLEEA 712

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            + + K++  +   D+     L+ G  K+G+   A  +   M  +  +PD
Sbjct: 713 DTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPD 762



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/445 (21%), Positives = 198/445 (44%), Gaps = 9/445 (2%)

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           S  +L  M   GI      ++ ++    R  +L +A+++  +M+   + P+ L     I+
Sbjct: 226 SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
                 RL+ A   LE M V+G+ P    +  ++RG C++ + +E++  LED       P
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYEL 429
               +  ++   C   +    + +++KMA     + D  ++N  I  L +++   +A   
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L          D   YSA V   CK     +A  +  ++       D ++Y+ +V G C+
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPP---DVVTYTAVVNGFCR 462

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           + ++ +A ++   M  +G   ++ S+  L+ G+C   K  +A  + +++     S  + T
Sbjct: 463 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 522

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y+ IM GL +  +  +   V+ +M+++G         +L+QS+    +  +   F    +
Sbjct: 523 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 582

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G   +     +++HG     +L    S ++ +   ++  D   Y  L++ L K+G  +
Sbjct: 583 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 642

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           +A+ L+  ML KG  P   T+  ++
Sbjct: 643 EATELMKKMLHKGIDPTPVTYRTVI 667



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 6/300 (2%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I        + KA   L RM V  +VP+  TY+  + G C L   E+A+ +   + +
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK-NGCSLSSSSFNILIYGLCVMRKVD 529
           +  + D +SY  ++  LC+ ++I E  ++   M+K +G      ++N LI+ L      D
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A+     A   G       Y+ I+  L K  R  +   ++ +M    C  DV  Y  ++
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVV 457

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
                  ++        VM   G  P+  +  +LL+G+    +       +N        
Sbjct: 458 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 517

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRF 707
            +S  Y+++++GL +EG  S+A  ++  M+ KG+ P      LL+ S    G   ++R+F
Sbjct: 518 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 577


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 218/470 (46%), Gaps = 27/470 (5%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +LG++V+ K  +   + + ++M   GI P          VLF           F+  
Sbjct: 79  FNKILGSLVKSKH-YHTVLSLSQQMEFEGINP----------VLF----------HFQHP 117

Query: 229 HK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           H+  G  PN+ TF  +IKGL    ++  ++     +  +G QL+   Y  +I  LC+  +
Sbjct: 118 HQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGE 177

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
              A+ L + +    + P+ + Y  +I+ +C++  ++DA D+  +M+  G++P    +  
Sbjct: 178 TRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 237

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G   VG+  ++++           P     N L++  C  GK    K +   M  + 
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 297

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I  +  ++   +   C  +E+ KA  +L  M    V PD  +Y+  + G CK+   ++A+
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F+++  + ++ D ++Y+ L++GLC++ KI+ A+++   M   G      +++ ++  L
Sbjct: 358 NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   +VDKAI L +     G      TYT ++ GL K  R +D   +   +LV+G  + V
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
             Y ++I     +    +     + M     +PD  T   ++  L D  +
Sbjct: 478 NTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE 527



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/489 (21%), Positives = 217/489 (44%), Gaps = 30/489 (6%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N +  A   F R+ ++   P +  F  ++  L+ +      +S+  +M   GI       
Sbjct: 55  NDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGIN------ 108

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLM---PDELTYEELINCLCENLRLDDANDILED 332
               P+L            F       LM   P+ +T+  LI  LC   ++  A    ++
Sbjct: 109 ----PVL------------FHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDN 152

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           ++ +G       +  ++ GLC+VG+   +++ L    G +  P    ++ +++  C    
Sbjct: 153 VVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKH 212

Query: 389 FFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +  +M  + I+ +  +++  I       +++ A +L  +M++ ++ PD  T++ 
Sbjct: 213 VNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNI 272

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            V G CK    ++   VF  +  Q +  + ++Y  L++G C V+++ +A  +   MS+ G
Sbjct: 273 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG 332

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            +    S+NILI G C ++KVD+A+ L    +         TY  ++ GL KL +    L
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            ++ +M   G   D+  Y  ++ ++ + +++         +   G+ P+  T   L+ GL
Sbjct: 393 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
             G +L    +    L+     +  + Y ++I+G   +GL  +A  LL  M     +PDA
Sbjct: 453 CKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDA 512

Query: 688 TTHGLLVGS 696
            T+ +++ S
Sbjct: 513 VTYEIIIRS 521



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 203/457 (44%), Gaps = 28/457 (6%)

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL----EDMIVIG 337
           L R+N    AI   K++ +L     +  +   +  L + +  +  N +L        ++G
Sbjct: 67  LLRQNPTPPAIEFNKILGSLV----KSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMG 122

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGK 388
             P    F  +++GLC  G+  +++ F +         D+ GY T     L+   C  G+
Sbjct: 123 YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGT-----LIHGLCKVGE 177

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +L ++    +  +   ++  I  +C+++ +  A++L   MV   + P+  TYSA
Sbjct: 178 TRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 237

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G   +   +DA+ +F ++  +++  D  +++ LV+G C+  K+ E   VF  M K G
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 297

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              +  ++  L+ G C++++V+KA  +       G +    +Y  ++ G  K+++  + +
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +  +M  +    DV  Y  LI  + +  K+       + M   G+ PD  T  S+L  L
Sbjct: 358 NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               Q+    + + KL       +   Y ILI+GL K G    A  + + +L KG+    
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477

Query: 688 TTHGLLVGSSVGEEIDSRRFAF-----DSSSFPDSVS 719
            T+ +++     + +     A      D+S  PD+V+
Sbjct: 478 NTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVT 514



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 120/238 (50%), Gaps = 32/238 (13%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ P++ + N L++   +  +++ A++ F+ MH K   P+  T+  +I GL    +
Sbjct: 328 MSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGK 387

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +  ++ ++ EM D G+  ++  Y+ I+  LC+ +++++AI L   ++   + P+  TY  
Sbjct: 388 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTI 447

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ LC+  RL+DA++I ED++V G   T + +  ++ G C  G FDE++          
Sbjct: 448 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAL---------- 497

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
                                 +L KM D   I D  ++ I IR L + +E  KA +L
Sbjct: 498 ---------------------ALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/486 (23%), Positives = 219/486 (45%), Gaps = 42/486 (8%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT ++  LC + +  +A+ L + M+   + PD +TY  LI  LC+   +D A ++L +M 
Sbjct: 97  YTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G+ P   V+  ++ G C+ G+++      E+  G    P    + AL++  C  GK  
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVK 216

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +++ M +R +  +  ++N+ I  +C+   +R+A +L   M    V PD  TY+  +
Sbjct: 217 KAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLI 276

Query: 450 LGKCKLCNYEDALRVFRQV--SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            G   +   ++A+ +  ++      +  D ++++ ++ GLC++  + +A++V   M++NG
Sbjct: 277 TGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  +  +FN+LI GL  + KV KA+ L     SSG    + TY+ ++ G  K+++ +   
Sbjct: 337 CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE 396

Query: 568 VVLAQMLVEG----------------------------------CALDVEAYCILIQSMS 593
             L++M  +G                                  C LD  AY  +I    
Sbjct: 397 SYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAF 456

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           +  + K    F   M+  GL+PD  T    ++  A    L      + ++ +   V D +
Sbjct: 457 KSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVA 516

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSS 713
           +++ LI G   +G T +   L   M  K    D      +V +S+G  I+ ++       
Sbjct: 517 VFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIV-TSLGASIEGQKLLQSLPG 575

Query: 714 FPDSVS 719
           F   +S
Sbjct: 576 FDTEIS 581



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 119/520 (22%), Positives = 221/520 (42%), Gaps = 49/520 (9%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +  ++ A+  ++R  A  V + + M   G+ P+V T   L+  L +   +++A++    M
Sbjct: 97  YTTLMRALCADRRA-AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + G  PN   +  ++ G     R +    +  EM   GI+ ++  YT +I  LCR  K+
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKV 215

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++A R+  MM    L P+ +TY  LIN +C+   + +A D+ ++M   G+ P    +  +
Sbjct: 216 KKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTS------PHNALLECCCNAGKFFLAKCILEKMADR 402
           + GL  V + DE++  LE+     T         N+++   C  G    A  +   MA+ 
Sbjct: 276 ITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAEN 335

Query: 403 KIADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
               C+  ++N+ I  L    +++KA EL+  M  S + PD  TYS  + G CK+   E 
Sbjct: 336 G-CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVER 394

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A     ++  Q +  + + Y  L++ +C    + +A ++F  M +N C L +++++ +I+
Sbjct: 395 AESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIH 453

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G                A+ SG       + K                    M+ EG   
Sbjct: 454 G----------------AFKSGEKKIAEEFLK-------------------DMIDEGLIP 478

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D   Y I I   ++   L         M  +G VPD     SL+ G         +    
Sbjct: 479 DAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELT 538

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            ++ +    LD  + + ++  L   G + +   LL  + G
Sbjct: 539 REMTAKDVALDPKIISTIVTSL---GASIEGQKLLQSLPG 575



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 172/358 (48%), Gaps = 7/358 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+ S   H +V  A RV+  M   G + +V  +NV++ ++ +E     + + + K M +
Sbjct: 204 ALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEG-SVREALDLRKNMSE 262

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK--KGCCPNSRTFEIVIKGLIANSRV 253
            G+ P+V T N L+  L     ++ A+     M +      P+  TF  VI GL     +
Sbjct: 263 KGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWM 322

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             ++ +   M + G +  L  +  +I  L R +K+++A+ L   M +  L PD  TY  L
Sbjct: 323 RQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSIL 382

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---VNFLEDKCG 370
           IN  C+  +++ A   L +M   G+ P    ++ +++ +C+ G   ++    N ++  C 
Sbjct: 383 INGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCK 442

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
              + ++ ++     +G+  +A+  L+ M D   I D  +++IPI    ++ ++  A  +
Sbjct: 443 LDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERV 502

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           L +M  S  VPD A + + + G     + E  L + R+++A+ + LD    S +V  L
Sbjct: 503 LKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 8/214 (3%)

Query: 514 SFNILIYGLCVMRKVDKAI---RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           S+N ++  LC    +D A+   R+ S      +     +YT +M  L   +RA   + +L
Sbjct: 58  SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             M   G   DV  Y  LI+ + +   +       N M ++G+ P+      LLHG    
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +   V     ++       D  MY  LI+ L + G   +A+ ++D+M  +G  P+  T+
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237

Query: 691 GLLVGS-----SVGEEIDSRRFAFDSSSFPDSVS 719
            +L+ S     SV E +D R+   +    PD V+
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVT 271


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 140/612 (22%), Positives = 267/612 (43%), Gaps = 12/612 (1%)

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           L   MV+ ++P       + + ++     ++GA  +L  M S G K S   +NV++  + 
Sbjct: 182 LFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLC 241

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
              R   + V V   MV+ GIV +  T   L+     T  +E AL+    M      P+ 
Sbjct: 242 RNNR-VLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSV 300

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            +   ++ GL     +D +  +   + +LG+   L     +I  LC++ +  EA RLF+ 
Sbjct: 301 ASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRG 360

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    L P+E+TY  LI+ LC+   +DDA  + + M   G+  T   +  ++ G C+   
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDN 420

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
           F ++   L +      +P    ++ L+   C  G    A  +  +MA   ++ +  ++  
Sbjct: 421 FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTT 480

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I   C++  + +A  L  +M+ SSVVP+  T++  + G C++ N   A +++ Q+  + 
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  D+ +Y  L+  LC      +A E    +  N   L+S S   L+YG C   ++ +  
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETY 600

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            +     + G      ++T I+   +KL   + + V+  +M  +G   D   +  +I   
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVH 660

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
           S++  +      ++ M+  G  P+  T   L++ L     L        +++    + +S
Sbjct: 661 SKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS 720

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRF 707
             YN  ++ L  EG   +A  L   +L +G + +  T   L+        +   ID  + 
Sbjct: 721 FTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQN 779

Query: 708 AFDSSSFPDSVS 719
             +S  FPD +S
Sbjct: 780 NTESGFFPDCIS 791



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 112/501 (22%), Positives = 206/501 (41%), Gaps = 21/501 (4%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R   A D  R     G      T   ++  LI   +   +  +  EM      L+   YT
Sbjct: 140 RARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYT 199

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             I   C    L+ A  L   M +  +    + Y  L+  LC N R+ +A ++   M+  
Sbjct: 200 AGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER 259

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAG---KF 389
           G+   +  +  +V G C   + + ++   +D       P  A    +++     G   K 
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           F   C L ++    + +  + N  I  LC++   R+A  L   M    + P+  TY+  +
Sbjct: 320 FRLACHLGELG--MVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILI 377

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              CK    +DAL +F ++  + + +    Y+ L+ G CQ +   +A  +   M + G +
Sbjct: 378 HSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLA 437

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            S++S++ LI GLC    +  A+ L      +G S    T+T ++ G  K     +   +
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL 497

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             +M+      +   + ++I+       ++     ++ MV  GL PD  T  SL+  L  
Sbjct: 498 FDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC- 556

Query: 630 GSQLHLVSSGINKLVSDSE----VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
              L L +    + V D E    VL+S     L+ G  KEG  ++  ++ D M  +G   
Sbjct: 557 ---LTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKL 613

Query: 686 DATTHGLLVGSSV----GEEI 702
           D  +  ++V +++    GE+I
Sbjct: 614 DLISFTVIVYAALKLHDGEKI 634



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/486 (22%), Positives = 199/486 (40%), Gaps = 44/486 (9%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDT 204
           R   A R+   M + G + +   + +++ ++   KRG  D    ++  M + GI   V  
Sbjct: 350 RFREAERLFRGMANRGLEPNEVTYAILIHSLC--KRGMMDDALCMFDRMREKGIRVTVYP 407

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N L+    + +    A      M +KG  P++ ++  +I GL     +  ++ +  EM 
Sbjct: 408 YNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMA 467

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G+   +  +T +I   C++  ++EA RLF  M    ++P+E+T+  +I   C    + 
Sbjct: 468 RNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVR 527

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLC-EVG--KFDESVNFLEDKCGYVTS-PHNALL 380
            A  + + M+  GLTP +  +  ++  LC  +G  K  E V+ LE+ C  + S     L+
Sbjct: 528 KAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLM 587

Query: 381 ECCCNAGKFFLAKCILEKMADR-----------------KIADCDSWNIPIRWLCEN--- 420
              C  G+      I ++M  R                 K+ D +  ++  R + E    
Sbjct: 588 YGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVK 647

Query: 421 ----------------EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
                           E I +A     +M+     P+  TY+  +   CK      A  +
Sbjct: 648 PDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQIL 707

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             ++     + +S +Y+  ++ L   E   E  +V       GC  ++ +FN LI G C 
Sbjct: 708 CEEMLVGRFLPNSFTYNCFLDFLAN-EGELEKAKVLHATILEGCLANTVTFNTLIKGFCK 766

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             ++  AI L      SG      +Y+ I+  L K+        +  +ML +G   D+ A
Sbjct: 767 AGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVA 826

Query: 585 YCILIQ 590
           Y ILI+
Sbjct: 827 YNILIR 832



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 182/448 (40%), Gaps = 56/448 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  +  H   + A  +L  M   G   S   ++ ++  +   K   A  + +++EM +
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR-KGDLASAMELHREMAR 468

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+  NV T   L+    +   ++ A   F +M      PN  TF ++I+G      V  
Sbjct: 469 NGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRK 528

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLC-------------------------------- 283
           +  +  +M D G+  +   Y  +I +LC                                
Sbjct: 529 AFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMY 588

Query: 284 ---RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI---LEDMIVIG 337
              +E +L E   ++  MRA  +  D +++  ++      L+L D   I     +M   G
Sbjct: 589 GFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAA---LKLHDGEKISVLFREMKEKG 645

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESV--------NFLEDKCGYVTSPHNALLECCCNAGKF 389
           + P D+VF      + +V   +E++          + D C      +  L+   C +G  
Sbjct: 646 VKP-DNVFHTC---MIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYL 701

Query: 390 FLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A+ + E+M   R + +  ++N  + +L    E+ KA ++L   ++   + +  T++  
Sbjct: 702 SSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTL 760

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G CK    + A+ + +  +      D ISYS ++  LC+V  I +A +++  M   G 
Sbjct: 761 IKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGL 820

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRS 536
                ++NILI    +  + DK + + S
Sbjct: 821 KPDIVAYNILIRWCNIHGEFDKGLGIYS 848



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 83/405 (20%), Positives = 172/405 (42%), Gaps = 11/405 (2%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           ++K    +A +Y  +I  L   G++     L + M +           +L+  F     +
Sbjct: 432 VEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNM 491

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGA---IVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           + A R+   M       +   FNV++     +   ++ F     +Y +MV  G+ P+  T
Sbjct: 492 DEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ----LYDQMVDRGLTPDNYT 547

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
              L+ VL  T     A +    +       NS +   ++ G     R+ ++  I  EM 
Sbjct: 548 YRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMR 607

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G++L+L  +T I+    + +  E+   LF+ M+   + PD + +  +I+   +   + 
Sbjct: 608 ARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIV 667

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
            A +  + MI  G +P    +  ++  LC+ G    +    E+       P    +N  L
Sbjct: 668 QALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFL 727

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
           +   N G+   AK +   + +  +A+  ++N  I+  C+  +I+ A +L+     S   P
Sbjct: 728 DFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFP 787

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           DC +YS  +   CK+ +   A +++ ++  + L  D ++Y+ L+ 
Sbjct: 788 DCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 39/271 (14%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           +L +L++ F    R+     +   M + G KL +  F V++ A ++   G      +++E
Sbjct: 582 SLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDG-EKISVLFRE 640

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ P+      +++V  +   I  AL+ + +M   GC PN  T+ ++I  L  +  
Sbjct: 641 MKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGY 700

Query: 253 VDDSVSILGEMFDLGIQLELSF-YTCIIPMLCRENKLEEA-------------------- 291
           +  S  IL E   +G  L  SF Y C +  L  E +LE+A                    
Sbjct: 701 LS-SAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNT 759

Query: 292 -IRLF----KMMRALDLM---------PDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I+ F    ++  A+DLM         PD ++Y  +IN LC+   ++ A  +  +M+  G
Sbjct: 760 LIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKG 819

Query: 338 LTPTDDVFVDIVRGLCEV-GKFDESVNFLED 367
           L P D V  +I+   C + G+FD+ +    D
Sbjct: 820 LKP-DIVAYNILIRWCNIHGEFDKGLGIYSD 849



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 9/160 (5%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK---KGCCPNSRTFEIVIKGL 247
           +EM+    +PN  T N  L+ L     +E A    + +H    +GC  N+ TF  +IKG 
Sbjct: 709 EEMLVGRFLPNSFTYNCFLDFLANEGELEKA----KVLHATILEGCLANTVTFNTLIKGF 764

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               ++  ++ ++    + G   +   Y+ II  LC+   + +A +L+  M    L PD 
Sbjct: 765 CKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDI 824

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           + Y  LI     +   D    I  DM  + L   DD  V+
Sbjct: 825 VAYNILIRWCNIHGEFDKGLGIYSDM--VNLKYADDTPVN 862


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 1080

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 151/653 (23%), Positives = 278/653 (42%), Gaps = 89/653 (13%)

Query: 141  FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVK 195
            F+N+Y  +G    A++    M S G    V   N VL  + +  R G A  VF   E+  
Sbjct: 411  FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF--HELKA 468

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             G+ P+  T   +++   + ++ + A+  F  M +  C P+      +I  L    R D+
Sbjct: 469  MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 528

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  I  ++ ++ ++     Y  ++  L RE K++E + L + M   +  P+ +TY  +++
Sbjct: 529  AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 588

Query: 316  CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE--------------------- 354
            CLC+N  ++DA D+L  M   G  P    +  ++ GL +                     
Sbjct: 589  CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 648

Query: 355  -------------VGKFDESVNFLEDKCGYVTSPHNALLECCCNA-GKFFLAKCILEK-- 398
                         +G   E+++ ++D   Y   P +      C++  +  L K  +EK  
Sbjct: 649  YATLCTILPSFVKIGLMKEALHIIKD---YFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 705

Query: 399  -----MADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
                 +A   I   D +  P I+ LC+ ++  +A+EL+ +     V      Y++ + G 
Sbjct: 706  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 765

Query: 453  CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                  + A  +F ++       D  +Y+ L++ + +  +I E ++V   M + G   + 
Sbjct: 766  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 825

Query: 513  SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             ++N +I GL   R++++AI L     S G S T  TY  ++ GL+K  R +D   +  +
Sbjct: 826  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885

Query: 573  MLVEGCAL-----------------------------------DVEAYCILIQSMSEQNK 597
            ML  GC                                     D+++Y I+I ++ +  +
Sbjct: 886  MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 945

Query: 598  LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
            L D   +F  +++ GL PD  T   L+ GL    +L    S  N++     V +   YN 
Sbjct: 946  LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1005

Query: 658  LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
            LI  L K G  ++A  + + +L KGW P+  T+  L+ G SV    DS   A+
Sbjct: 1006 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1058



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 145/633 (22%), Positives = 279/633 (44%), Gaps = 30/633 (4%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----GLAGNVEEMEG 117
           + + +I  L + +  + AL+ F+  + + R  HT  + C  +L+L    G  G++ E+  
Sbjct: 56  AAEDVIHALRSADGPAEALERFRSAARKPRVAHTTAS-CNYMLELMRGHGRVGDMAEVFD 114

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVL 173
           + Q         + +A +    +      V G +R     L  M   G  L+   +N ++
Sbjct: 115 VMQR-------QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV 167

Query: 174 GAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
             +V  K GF  + + VY+ M+  G+VP+V T + L+    +   +E+ L   R M   G
Sbjct: 168 YFLV--KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 225

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             PN  ++ I I+ L    R D++  IL +M + G + ++  +T +I +LC   ++ +A 
Sbjct: 226 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 285

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            +F  M+  D  PD +TY  L++   +N       +I   M   G       +  ++  L
Sbjct: 286 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 345

Query: 353 CEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           C+VG+  E++   ++  + G V     +N+L+     A +F  A  + + M D      +
Sbjct: 346 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM-DIHGPKPN 404

Query: 409 SWN--IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
            +   + I +  ++ E  KA +    M    +VPD    +A + G  K      A RVF 
Sbjct: 405 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 464

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++ A  +  D+I+Y+ +++   +  K  EAV++F  M +N C     + N LI  L    
Sbjct: 465 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 524

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           + D+A R+           T  TY  ++ GL +  + K+++ +L +M       ++  Y 
Sbjct: 525 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 584

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK---- 642
            ++  + +   + D       M   G +PD  +  ++++GL    + +   S   +    
Sbjct: 585 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 644

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           L+ D   L + + + +  GL KE L     Y L
Sbjct: 645 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 677



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 115/555 (20%), Positives = 231/555 (41%), Gaps = 42/555 (7%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K  +     + NY+LE++    R+    + F  M ++    N  TF  +  GL     + 
Sbjct: 83  KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 142

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +   L  M + GI L    Y  ++  L +     EA+ ++++M    ++P   TY  L+
Sbjct: 143 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 202

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCG 370
               +   ++    +L +M   G+ P    +   +R L +  +FDE+   L     + C 
Sbjct: 203 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 262

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                H  L++  C+AG+   AK +  KM  +D+K  D  ++   +    +N + +   E
Sbjct: 263 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK-PDRVTYITLLDKFGDNGDSQSVME 321

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   M       +   Y+A +   C++    +AL +F ++  + +V +  SY+ L+ G  
Sbjct: 322 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 381

Query: 489 QVEKITEAVEVFCCM-------------------SKNGCSLSS----------------S 513
           + ++  +A+E+F  M                    K+G S+ +                 
Sbjct: 382 KADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 441

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           + N +++GL    ++  A R+     + G S  T TYT ++    K  +  + + +   M
Sbjct: 442 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 501

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           +   C  DV A   LI ++ +  +  +    F  + +  L P   T  +LL GL    ++
Sbjct: 502 IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 561

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
             V   + ++   +   +   YN +++ L K G  + A  +L  M  KG +PD +++  +
Sbjct: 562 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 621

Query: 694 VGSSVGEEIDSRRFA 708
           +   V EE  +  F+
Sbjct: 622 IYGLVKEERYNEAFS 636



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 134/664 (20%), Positives = 269/664 (40%), Gaps = 88/664 (13%)

Query: 4    KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSP 63
            +L ++ +S   I +  +  C S  S  +   +    DMI+++   D           L+ 
Sbjct: 465  ELKAMGVSPDTITYTMMIKCCSKASKFDEA-VKIFYDMIENNCVPDV----------LAV 513

Query: 64   DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            + LI  L        A +IF  +  +   + T  TY  ++  LG  G V+E+  L + M 
Sbjct: 514  NSLIDTLYKAGRGDEAWRIFYQLK-EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 572

Query: 124  KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               YP       +++     +  VN A+ +L +M + G    +  +N V+  +V+E+R +
Sbjct: 573  HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER-Y 631

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL----DQFRR------------ 227
             +   ++ +M K  ++P+  TL  +L    +   ++ AL    D F +            
Sbjct: 632  NEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHS 690

Query: 228  -----MHKKGCCPNSRTFEIV---------------IKGLIANSRVDDSVSILGEMFDLG 267
                 + K G   +    EI+               IK L    +  ++  ++ +    G
Sbjct: 691  LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 750

Query: 268  IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
            + L+   Y  +I  L  EN ++ A  LF  M+ L   PDE TY  L++ + +++R+++  
Sbjct: 751  VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 810

Query: 328  DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECC 383
             + E+M   G   T   +  I+ GL +  + +++++   +    G+  +P  +  LL+  
Sbjct: 811  KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 870

Query: 384  CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
              AG+                                  I  A  L   M+      +C 
Sbjct: 871  LKAGR----------------------------------IEDAENLFNEMLEYGCKANCT 896

Query: 444  TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
             Y+  + G     N E    +F+ +  Q +  D  SY+ +++ LC+  ++ + +  F  +
Sbjct: 897  IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 956

Query: 504  SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
             + G      ++N+LI GL   +++++A+ L +     G      TY  ++L L K  +A
Sbjct: 957  LEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1016

Query: 564  KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
             +   +  ++L +G   +V  Y  LI+  S           +  M+  G +P+  T + L
Sbjct: 1017 AEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076

Query: 624  LHGL 627
             + L
Sbjct: 1077 PNQL 1080



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 126/634 (19%), Positives = 245/634 (38%), Gaps = 78/634 (12%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  MI     A   +E   +  +M++    P+V  A+ SL+ +     R + A R+   
Sbjct: 477  TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVL-AVNSLIDTLYKAGRGDEAWRIFYQ 535

Query: 157  MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
            +     + +   +N +L  +  E +   + + + +EM  +   PN+ T N +L+ L +  
Sbjct: 536  LKEMNLEPTDGTYNTLLAGLGREGK-VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 594

Query: 217  RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM------------- 263
             +  ALD    M  KGC P+  ++  VI GL+   R +++ SI  +M             
Sbjct: 595  AVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCT 654

Query: 264  ----------------------FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                                     G + + S    ++  + ++  +E++I   +++ + 
Sbjct: 655  ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 714

Query: 302  DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             +  D+     LI  LC+  +  +A+++++     G++    ++  ++ GL +    D +
Sbjct: 715  GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 774

Query: 362  VN-FLEDK---CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRW 416
               F E K   CG     +N LL+    + +      + E+M  +       ++N  I  
Sbjct: 775  EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 834

Query: 417  LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
            L ++  + +A +L   ++     P   TY   + G  K    EDA  +F ++       +
Sbjct: 835  LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 894

Query: 477  SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
               Y+ L+ G        +   +F  M   G +    S+ I+I  LC             
Sbjct: 895  CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC------------- 941

Query: 537  LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                                  K  +  D L    Q+L  G   D+  Y +LI  + +  
Sbjct: 942  ----------------------KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSK 979

Query: 597  KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            +L++    FN M K G+VP+  T  SL+  L    +         +L++     +   YN
Sbjct: 980  RLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYN 1039

Query: 657  ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             LI G    G T  A      M+  G +P+++T+
Sbjct: 1040 ALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/529 (22%), Positives = 232/529 (43%), Gaps = 68/529 (12%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +LG++V+ K  +   +++ ++M   GI PN+   N L+    +   I  A   F ++
Sbjct: 88  FNKILGSLVKSKH-YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 146

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  + KGL    ++  +     ++  LG   +   Y  +I  LC+  + 
Sbjct: 147 LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A+ L + +    + P+ + Y  +I+ +C+   +++A D+  +M+  G++P    +  +
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           + G C +GK  ++++                             K ILE +      D  
Sbjct: 267 ISGFCILGKLKDAIDLFN--------------------------KMILENIK----PDVY 296

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++NI +   C++ ++++   +   M+   + P+  TY++ + G C +     A  +F  +
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           +   +  D  SYS ++ G C+++K  EA+ +F  M +        +++ LI GL    ++
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A++L    +  G      TY  I+  L K  +    + +L +   +G   D+  Y IL
Sbjct: 417 SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476

Query: 589 IQSMSEQNKLKDC-ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           I+ + +  KL+D   +F +++VK                            G N      
Sbjct: 477 IKGLCQSGKLEDARKVFEDLLVK----------------------------GYN------ 502

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             LD   Y I+I G   EGL ++A  LL  M   G +PDA T+ +++ S
Sbjct: 503 --LDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 132/271 (48%), Gaps = 7/271 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    + G +++   L   M+ E   P+V    I LV +F    ++     V   
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI-LVNAFCKDGKMKEGKTVFDM 320

Query: 157 MNSGGFKLSVDVFNVVLGA--IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           M   G K +   +N ++    +V+E         ++  M + G+ P++ + + ++    +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS---IFNTMAQGGVNPDIQSYSIMINGFCK 377

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             + + A++ F+ MH+K   P+  T+  +I GL  + R+  ++ ++ +M D G+   +  
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICT 437

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  I+  LC+ +++++AI L    +     PD  TY  LI  LC++ +L+DA  + ED++
Sbjct: 438 YNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL 497

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           V G       +  +++G C  G F+E++  L
Sbjct: 498 VKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 1/207 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
            VN A  +   M  GG    +  +++++    + K+ F + + ++KEM +  I+P+V T 
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK-FDEAMNLFKEMHRKNIIPDVVTY 403

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L++ L ++ RI  AL    +MH +G  PN  T+  ++  L    +VD ++++L +  D
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKD 463

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G Q ++S Y+ +I  LC+  KLE+A ++F+ +       D   Y  +I   C     ++
Sbjct: 464 KGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNE 523

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGL 352
           A  +L  M   G  P    +  I+  L
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIIILSL 550



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 133/293 (45%), Gaps = 1/293 (0%)

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N ++  A  L  R++  +  P    ++  +    K  +Y   L + +++  + +  + ++
Sbjct: 63  NNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 122

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            + L+   CQ+  I  A  VF  + K G    + +F  L  GLC+  ++ +A        
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVV 182

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + G  +   +Y  ++ GL K+   +  L +L ++       +V  Y  +I SM +   + 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    F+ MV  G+ PD  T  +L+ G     +L       NK++ ++   D   +NIL+
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVGEEIDSRRFAFDS 711
           N   K+G   +   + D+M+ +G  P+  T+  L+ G  + +E++  +  F++
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 3/178 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L  +G +     L   M     P       S++ +    ++V+ A+ +L   
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              GF+  +  +++++  + +  +   D   V+++++  G   +V     +++       
Sbjct: 462 KDKGFQPDISTYSILIKGLCQSGK-LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGL 520

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
              AL    +M   GC P+++T+EI+I  L      D +  +L EM   G  L L+FY
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG--LPLNFY 576


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 225/478 (47%), Gaps = 22/478 (4%)

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            RR+ + G  P+      V+  L     +D+++ +   + D  +      Y  ++ +LC 
Sbjct: 223 LRRVRQYGISPSPEACNAVLSRLP----LDEAIELFQGLPDKNV----CSYNILLKVLCG 274

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             ++E+A +LF  M +    PD +TY  LI+  C    L++A  +L+DM+  G+ P   V
Sbjct: 275 AGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATV 331

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVT----SPHNALLECCCNAGKFFLAKCILEKMA 400
           +  +V  LC+ G+  +++  +ED   +      + +  +L   CN G    A+   ++M 
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQ 391

Query: 401 DRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            + +A D  ++   I  LC   E+++A ++L  M+   +  D  TY+  V G CK     
Sbjct: 392 RKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMA 451

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A +V   +  + +  + ++Y+ L +GLC+   +  A E+   MS  G  L++ ++N LI
Sbjct: 452 EAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 511

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVE 576
            GLC    +D+A+R  +   ++G      TYT ++  L K   L RA DL   L +ML  
Sbjct: 512 NGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL---LQEMLDN 568

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G    +  Y +L+       +++        M++  + P+  T  SL+     G+ +   
Sbjct: 569 GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKST 628

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +     + S +   + + YNILI G  K     +A Y  + M+ KG+   A+++  L+
Sbjct: 629 TEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 230/517 (44%), Gaps = 18/517 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + + + GI P+ +  N +L  L     ++ A++ F+ +  K  C    ++ I++K L   
Sbjct: 224 RRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDKNVC----SYNILLKVLCGA 275

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            RV+D+  +  EM       ++  Y  +I   C   +LE A++L   M A  + P+   Y
Sbjct: 276 GRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVY 332

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--K 368
             ++  LC+  R+ DA  ++EDM+   +   + V+  ++ G C  G    +  + ++  +
Sbjct: 333 TSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQR 392

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIR 424
            G  T    +  L+   C AG+   A+ +L++M  R++ D D  ++ + +   C+  ++ 
Sbjct: 393 KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL-DVDEVTYTVLVDGYCKRGKMA 451

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+++   MV   V P+  TY+A   G CK  + + A  +  ++S + L L++ +Y+ L+
Sbjct: 452 EAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 511

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+   + +A+     M   G      ++  LI  LC   ++D+A  L      +G  
Sbjct: 512 NGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIK 571

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
            T  TY  +M G     R +    +L  ML +    +   Y  L++     N +K     
Sbjct: 572 PTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEI 631

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           +  M    + P+  T   L+ G      +       N+++     L +S Y+ LI  L K
Sbjct: 632 YKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNK 691

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           +    +A  L   M  +G+  +   +   +  +  E+
Sbjct: 692 KKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNED 728



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/512 (20%), Positives = 218/512 (42%), Gaps = 34/512 (6%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           AG VE+   L   M     P+V    I L+  +     +  A+++L +M + G + +  V
Sbjct: 275 AGRVEDARQLFDEMASP--PDVVTYGI-LIHGYCALGELENAVKLLDDMVARGVEPNATV 331

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +  V+  + ++ R  +D + V ++MV   ++ +      +L        + SA   F  M
Sbjct: 332 YTSVVALLCDKGR-VSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            +KG   +  T+  +I GL     + ++  +L EM    + ++   YT ++   C+  K+
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA ++   M    + P+ +TY  L + LC+   +  AN++L +M   GL      +  +
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           + GLC+ G  D+++  + D       P                              D  
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKP------------------------------DVY 540

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++   I  LC++ E+ +A++LL  M+ + + P   TY+  + G C     E   ++   +
Sbjct: 541 TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM 600

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +++  ++ +Y+ L++  C    +    E++  M       + +++NILI G C  R +
Sbjct: 601 LEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSM 660

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
            +A    +     G   T S+Y+ ++  L K ++  +   +   M  EG   + + Y   
Sbjct: 661 KEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFY 720

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           I     ++ L+      + +V+A +V  +  M
Sbjct: 721 IDFNFNEDNLEATLALCDELVEASIVKSKAEM 752



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 196/449 (43%), Gaps = 40/449 (8%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           +L +A+K+   + + +  +  A  Y  ++  L   G V +   + ++MV  +   + EA+
Sbjct: 309 ELENAVKLLDDM-VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKV-ILDEAV 366

Query: 135 ISLVFS-FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
            + V S F N   +  A R    M   G       +  ++  +        +   V +EM
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGE-LKEAEKVLQEM 425

Query: 194 VKAGIVPNVDTLNY--LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +   +  +VD + Y  L++   +  ++  A      M ++G  PN  T+  +  GL    
Sbjct: 426 LARRL--DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG 483

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V  +  +L EM + G++L    Y  +I  LC+   L++A+R    M A  L PD  TY 
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+ LC++  LD A+D+L++M+  G+ PT      IV                      
Sbjct: 544 TLIDALCKSGELDRAHDLLQEMLDNGIKPT------IVT--------------------- 576

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               +N L+   C +G+    K +LE M ++ I  +  ++N  ++  C    ++   E+ 
Sbjct: 577 ----YNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIY 632

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M   +V P+  TY+  + G CK  + ++A     ++  +   L + SYS L+  L + 
Sbjct: 633 KGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKK 692

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +K  EA ++F  M K G +     +N  I
Sbjct: 693 KKFVEARKLFHDMRKEGFTAEPDVYNFYI 721


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 211/505 (41%), Gaps = 48/505 (9%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
             PNV     L+    E   +E AL  + +M      P  +   +V+ GL+   R D   
Sbjct: 124 FTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            + G+M   G    +  Y  +I   CR+    +A RLF  M    + P  + Y  LI  L
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C   R+ +A  +   M   G+ P    +  ++ G C++    +++               
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY------------ 286

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                              E + D  + +  ++ I I  LC+ +E+  A + L  M    
Sbjct: 287 ------------------XEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           VVP+   Y+  + G CK  N  +AL +  ++    ++ D  +YS L++GLC V+++ EA 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +   M K G   ++ ++N LI G C    ++KAI + S     G      T++ ++ G 
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K  + +  + +  +M+++G   DV AY  LI    +    K+       M +AGL P+ 
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 618 ETMLSLLHGL------ADGSQLHLVSSGINKLVSDSEVLDSS-------MYNILINGLWK 664
            T+  L+ GL      +D  +L L  +G +   S +  LD S       MY  LI GL  
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCT 568

Query: 665 EGLTSQASYLLDLMLGKGWVPDATT 689
           +G   +AS     M   G  PD  T
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFT 593



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 236/527 (44%), Gaps = 22/527 (4%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K + +VF V++ A  E      + ++VY +M    ++P +   N +L+ L +  R ++  
Sbjct: 123 KFTPNVFGVLIIAFSEMGL-VEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             +  M  +G  PN  T+  +I G         +  +  EM +  I   +  YT +I  L
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C E+++ EA  +F+ MR   ++P+  TY  +++  C+   +  A ++  +M+  GL P  
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNV 298

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             F  ++ GLC+  +   +  FL D   +   P    +N L++  C AG    A  +  +
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           +   +I  D  +++I I+ LC  + + +A  LL  M     +P+  TY+  + G CK  N
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            E A+ V  Q++ + +  + I++S L++G C+  K+  A+ ++  M   G      ++  
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL-VVLAQMLVE 576
           LI G        +A RL      +G      T + ++ GL K  R  D + + LA+   +
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538

Query: 577 G------------CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
                        C+ +   Y  LIQ +    ++   + FF+ M  +GL PD  T + ++
Sbjct: 539 TTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVII 598

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            G      L  V      ++    + +SS+Y +L  G  + G    A
Sbjct: 599 QGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 159/352 (45%), Gaps = 5/352 (1%)

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GL + G+FD       D      SP    +  L++ CC  G F  A  + ++M ++K
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I      + I IR LC    I +A  +   M  S ++P+  TY+  + G CK+ + + AL
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            ++ ++    L+ + +++  L++GLC+ +++  A +    M+  G   +   +N LI G 
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C    + +A+ L S            TY+ ++ GL  + R ++   +L +M  +G   + 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LI    ++  ++      + M + G+ P+  T  +L+ G     ++        +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +V    + D   Y  LI+G +K+G T +A  L   M   G  P+  T   L+
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 139/322 (43%), Gaps = 29/322 (9%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG--NVEEMEGLCQNMVKERY-P 128
              +LS AL +   +   ++ +   D +   IL  GL G   +EE +GL Q M K+ + P
Sbjct: 345 KAGNLSEALSLHSEI---EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
           N      +L+  +     +  A+ V   M   G + ++  F+ ++    +  +  A  + 
Sbjct: 402 NA-VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA-MG 459

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +Y EMV  G++P+V     L++  F+    + A    + M + G  PN  T   +I GL 
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519

Query: 249 ANSRVDDSVSILGEMFDLGI--------QLELSF-------YTCIIPMLCRENKLEEAIR 293
            + R+ D++ +   +   G         +L+ S        YT +I  LC + ++ +A +
Sbjct: 520 KDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASK 577

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
            F  MR   L PD  T   +I      + L D   +  D++ +G+ P   V+  + +G  
Sbjct: 578 FFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYE 637

Query: 354 EVGKFDESVNFLEDKCGYVTSP 375
           E G    +++F    CG    P
Sbjct: 638 ESGYLKSALSF----CGEGVQP 655


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 225/513 (43%), Gaps = 10/513 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           + +MV    +P       L  ++ +     + +   + ++  G  P+  T  I+I  L  
Sbjct: 59  FHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCH 118

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            +      S+LG MF +G+   +  +  +I  LC E  +  A R    +  +    +  T
Sbjct: 119 LNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYT 178

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV---DIVRGLCEVGKFDESVNFLE 366
           Y  +IN LC+    D +  IL    + G     DV +    I+  LC+ G   E++N   
Sbjct: 179 YGAIINGLCK--AGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFS 236

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
                   P    +N+L+   CN G++  A  +L  M  + I  +  ++N+ +   C++ 
Sbjct: 237 GMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDG 296

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            I +A  ++G MV   V PD  TY++ + G C L    DA++VF  +  +  + + ++YS
Sbjct: 297 MISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYS 356

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ G C+ + I +A+ +   M  +G +    +++ LI G C   K + A  L    +  
Sbjct: 357 SLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEH 416

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
                  T   I+ GL K Q   + + +  +M      L+V  Y I++  M    KL D 
Sbjct: 417 DQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDA 476

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ +   G+  D     +++ GL     L    + + K+  +  + +   YN+ + G
Sbjct: 477 QELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRG 536

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L +    S+++  L LM GKG   DATT  LL+
Sbjct: 537 LLQRYDISRSTKYLLLMKGKGLSADATTTELLI 569



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 115/492 (23%), Positives = 194/492 (39%), Gaps = 79/492 (16%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  + G IV+ K  +A  + + K +   GI P+V TL  ++  L   N           M
Sbjct: 74  FTKLFGIIVKMKH-YATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVM 132

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ------------------- 269
            K G  P   TF  +I GL A   V  +      + D+G Q                   
Sbjct: 133 FKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDT 192

Query: 270 ------LE-----------LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
                 LE           +  Y+ I+  LC++  + EA+ LF  M +  + PD + Y  
Sbjct: 193 SGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNS 252

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ LC   R  +A  +L +M+  G+ P    F  +V   C+ G    +   +       
Sbjct: 253 LIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVG 312

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAY 427
             P    +N+++   C   +   A  + E M  +  + +  +++  I   C+ + I KA 
Sbjct: 313 VEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKAL 372

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCK----------LCN-------------------- 457
            LLG MV S + PD  T+S  + G CK           C                     
Sbjct: 373 FLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGL 432

Query: 458 -----YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                + +A+ +FR++   +L L+ + Y+ +++G+C   K+ +A E+F C+   G  +  
Sbjct: 433 FKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDV 492

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++  +I GLC    +D A  L      +G      TY   + GL  LQR          
Sbjct: 493 VAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL--LQRYDISRSTKYL 550

Query: 573 MLVEGCALDVEA 584
           +L++G  L  +A
Sbjct: 551 LLMKGKGLSADA 562



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/388 (20%), Positives = 169/388 (43%), Gaps = 33/388 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  M   GI P++   N L+  L    R + A      M +KG  PN +TF +++    
Sbjct: 234 LFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFC 293

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +  +  + +I+G M  +G++ ++  Y  +I   C  +++ +A+++F++M     +P+ +
Sbjct: 294 KDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLV 353

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI+  C+   ++ A  +L +M+  GL P    +  ++ G C+ GK + +       
Sbjct: 354 TYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELF--- 410

Query: 369 CG-YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
           C  +    H  L  C       F  KC     A     + +  N+ +             
Sbjct: 411 CTMHEHDQHPNLQTCAIILDGLF--KCQFHSEAISLFREMEKMNLEL------------- 455

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
                +V+ ++V D         G C      DA  +F  + ++ + +D ++Y+ +++GL
Sbjct: 456 ----NVVIYNIVLD---------GMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGL 502

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+   + +A  +   M +NGC  +  ++N+ + GL     + ++ +   L    G S   
Sbjct: 503 CKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADA 562

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +T T++++      +    L V  Q  V
Sbjct: 563 TT-TELLISYFSANKENSALHVFLQEFV 589



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 118/292 (40%), Gaps = 1/292 (0%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  +  I I  LC        + +LG M    V P   T++  + G C   N   A R  
Sbjct: 105 DVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFA 164

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS-SFNILIYGLCV 524
             +       +S +Y  ++ GLC+    + A+     +    C L    +++ ++  LC 
Sbjct: 165 DSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCK 224

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              V +A+ L S   S G       Y  ++ GL    R K+   +L  M+ +G   +V+ 
Sbjct: 225 DGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQT 284

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           + +L+ +  +   +         MV  G+ PD  T  S++ G    SQ+         ++
Sbjct: 285 FNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMI 344

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               + +   Y+ LI+G  K    ++A +LL  M+  G  PD  T   L+G 
Sbjct: 345 HKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGG 396



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 153/373 (41%), Gaps = 48/373 (12%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKR--GFADFV 187
           SL+    N  R   A  +L NM   G   +V  FNV++      G I   K   GF    
Sbjct: 252 SLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGF---- 307

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
                MV  G+ P+V T N ++      +++  A+  F  M  KG  PN  T+  +I G 
Sbjct: 308 -----MVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGW 362

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
                ++ ++ +LGEM + G+  ++  ++ +I   C+  K E A  LF  M   D  P+ 
Sbjct: 363 CKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNL 422

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            T   +++ L +     +A  +  +M  + L     ++  ++ G+C  GK +++      
Sbjct: 423 QTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDA------ 476

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                      L  C  + G               KI D  ++   I+ LC+   +  A 
Sbjct: 477 ---------QELFSCLPSKG--------------IKI-DVVAYTTMIKGLCKEGLLDDAE 512

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            LL +M  +  +P+  TY+ FV G  +  +   + +    +  + L  D+ + ++L+   
Sbjct: 513 NLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATT-TELLISY 571

Query: 488 CQVEKITEAVEVF 500
               K   A+ VF
Sbjct: 572 FSANKENSALHVF 584



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 36/281 (12%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A     +MVV + +P    ++       K+ +Y   + + + + +  +  D  + + ++ 
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC +        V   M K G   +  +F  LI GLC    V +A R        G   
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQS 174

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE-AYCILIQSMSEQNKLKDCALF 604
            + TY  I+ GL K       ++ L ++    C LDV  AY  ++ S+ +   + +    
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ M   G+ PD                          LV+         YN LI+GL  
Sbjct: 235 FSGMTSKGIQPD--------------------------LVA---------YNSLIHGLCN 259

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
            G   +A+ LL  M+ KG +P+  T  +LV +   + + SR
Sbjct: 260 FGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISR 300


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 187/760 (24%), Positives = 312/760 (41%), Gaps = 129/760 (16%)

Query: 55  QSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           +S + +LS   + RVL +  D  S+   FK V+      HT +T   M+  L + G +EE
Sbjct: 79  KSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEE 138

Query: 115 ME---GLCQNMVKERYPN--------------VREALISLV----FSFV-NHYRVNG--- 149
           M     L Q  + +R  N              +R+A  +L     F FV N Y  NG   
Sbjct: 139 MAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIH 198

Query: 150 ----------AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
                     AM V   M   GF+ S+  ++ ++  +  ++R     + + KEM   G+ 
Sbjct: 199 LLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGL-GKRRDIESVMGLLKEMETLGLK 257

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD----- 254
           PNV T    + VL    +I  A +  +RM  +GC P+  T+ ++I  L    ++D     
Sbjct: 258 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 317

Query: 255 -----------------------------DSVS-ILGEMFDLGIQLELSFYTCIIPMLCR 284
                                        DSV+    EM   G   ++  +T ++  LC+
Sbjct: 318 FAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCK 377

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
                EA     +MR   ++P+  TY  LI  L    RLDDA +I ++M  +G+ PT   
Sbjct: 378 AGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYT 437

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVT---SPH----NALLECCCNAGKFFLAKCILE 397
           ++  +      GK  +SV+ LE      T   +P+    NA L     AG+   AK I  
Sbjct: 438 YIVFID---YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 494

Query: 398 KMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            + D   + D  ++N+ ++   +  EI +A +LL  MV +   PD    ++ +    K  
Sbjct: 495 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKAD 554

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ++A ++F ++    L    ++Y+ L+ GL +  KI EA+E+F  M + GC  ++ +FN
Sbjct: 555 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 614

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM--- 573
            L   LC   +V  A+++       G      TY  I+ GLVK  + K+ +    QM   
Sbjct: 615 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 674

Query: 574 ----------LVEG---CALDVEAYCI-------------------LIQSMSEQNKLKDC 601
                     L+ G     L  +AY I                   L+ S+  +  + + 
Sbjct: 675 VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNA 734

Query: 602 ALFFNVMVKAGLVPDRETML------SLLHGLADGSQLHLVSSGINKLVSDSEVLDS-SM 654
             F   +V  G+  D +++L      S  H  A G+++        K   D  V      
Sbjct: 735 VSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLF-----EKFTKDLGVQPKLPT 789

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           YN+LI GL +  +   A  +   +   G +PD  T+  L+
Sbjct: 790 YNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLL 829



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 265/607 (43%), Gaps = 20/607 (3%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY----RVNGAMRV 153
            TY  M+      G ++E   L   MV+    N  E  + +V S +N      RV+ A ++
Sbjct: 507  TYNMMMKCYSKVGEIDEAIKLLSEMVE----NCCEPDVIVVNSLINTLYKADRVDEAWKM 562

Query: 154  LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
             + M     K +V  +N +L  + +  +   + + +++ MV+ G  PN  T N L + L 
Sbjct: 563  FMRMKEMKLKPTVVTYNTLLAGLGKNGK-IQEAIELFEGMVQKGCPPNTITFNTLFDCLC 621

Query: 214  ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
            + + +  AL    +M   GC P+  T+  +I GL+ N +V +++    +M  L +  +  
Sbjct: 622  KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFV 680

Query: 274  FYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
                ++P + +   +E+A ++    + +    P  L +E+L+  +     +D+A    E 
Sbjct: 681  TLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSER 740

Query: 333  MIVIGL-TPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSP-HNALLECCCNA 386
            ++  G+    D + V I+R   +      +      F +D       P +N L+     A
Sbjct: 741  LVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEA 800

Query: 387  GKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                +A+ +  ++ +   I D  ++N  +    ++ +I + +E+   M      P+  T+
Sbjct: 801  DMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITH 860

Query: 446  SAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
            +  + G  K  N +DAL ++  + S +     + +Y  L++GL +  ++ EA ++F  MS
Sbjct: 861  NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMS 920

Query: 505  KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
              GC  + + +NILI G     + D A  L       G      TY+ ++  L  + R  
Sbjct: 921  DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 980

Query: 565  DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA-GLVPDRETMLSL 623
            + L    ++   G   DV  Y ++I  + + ++L++  + FN M K+ G+ PD  T  SL
Sbjct: 981  EGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSL 1040

Query: 624  LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
            +  L     +       N++       +   +N LI G    G    A  +   M+  G+
Sbjct: 1041 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1100

Query: 684  VPDATTH 690
             P+  T+
Sbjct: 1101 SPNTGTY 1107



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 157/727 (21%), Positives = 298/727 (40%), Gaps = 87/727 (11%)

Query: 52   AKIQSLRHNLSPDHL--IRVLDNTNDLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLG 107
            AK+++ RH   PD +  I +LD  +D      + ++ S  ++  H  D  T+  ++  L 
Sbjct: 319  AKMKTGRH--KPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALC 376

Query: 108  LAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
             AGN  E       M  +   PN+     +L+   +  +R++ A+ +  NM S G K + 
Sbjct: 377  KAGNFGEAFAKLDVMRDQGILPNL-HTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTA 435

Query: 167  DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
              + V +    +     +     +++M   GI PN+   N  L  L +  R   A   F 
Sbjct: 436  YTYIVFIDYYGKSGDSVSALE-TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 494

Query: 227  RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
             +   G  P+S T+ +++K       +D+++ +L EM +   + ++     +I  L + +
Sbjct: 495  GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKAD 554

Query: 287  KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
            +++EA ++F  M+ + L P  +TY  L+  L +N ++ +A ++ E M+  G  P    F 
Sbjct: 555  RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF- 613

Query: 347  DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IA 405
                                          N L +C C   +  LA  +L KM D   + 
Sbjct: 614  ------------------------------NTLFDCLCKNDEVTLALKMLFKMMDMGCVP 643

Query: 406  DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
            D  ++N  I  L +N ++++A     +M    V PD  T    + G  K    EDA ++ 
Sbjct: 644  DVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKII 702

Query: 466  RQ--------------------VSAQSLVLDSISYSK--LVEGLC--------------- 488
                                  + A++ + +++S+S+  +  G+C               
Sbjct: 703  ANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSF 762

Query: 489  QVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            +    + A  +F   +K+ G      ++N+LI GL     ++ A  +     ++G     
Sbjct: 763  KHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDV 822

Query: 548  STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA-LFFN 606
            +TY  ++    K  +  +L  +  +M    C  +   + I+I  + +   + D   L+++
Sbjct: 823  ATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYD 882

Query: 607  VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            +M      P   T   L+ GL+   +L+        +       + ++YNILING  K G
Sbjct: 883  LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAG 942

Query: 667  LTSQASYLLDLMLGKGWVPDATTHGLLVG-----SSVGEEIDSRRFAFDSSSFPDSV-SD 720
                A  L   M+ +G  PD  T+ +LV        V E +   R   +S   PD V  +
Sbjct: 943  EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYN 1002

Query: 721  ILAEGLG 727
            ++  GLG
Sbjct: 1003 LIINGLG 1009



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 123/567 (21%), Positives = 236/567 (41%), Gaps = 48/567 (8%)

Query: 64   DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            + LI  L   + +  A K+F  +  + + + T  TY  ++  LG  G ++E   L + MV
Sbjct: 544  NSLINTLYKADRVDEAWKMFMRMK-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 602

Query: 124  KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
            ++  P       +L      +  V  A+++L  M   G    V  +N ++  +V  K G 
Sbjct: 603  QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV--KNGQ 660

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEI 242
                  +   +K  + P+  TL  LL  + +   IE A       ++     P +  +E 
Sbjct: 661  VKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWED 720

Query: 243  VIKGLIANSRVDDSVS-----------------------------------ILGEMF--D 265
            ++  ++A + +D++VS                                   +L E F  D
Sbjct: 721  LMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKD 780

Query: 266  LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            LG+Q +L  Y  +I  L   + +E A  +F  ++    +PD  TY  L++   ++ ++D+
Sbjct: 781  LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDE 840

Query: 326  ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-----KCGYVTSPHNALL 380
              +I ++M      P       ++ GL + G  D++++   D             +  L+
Sbjct: 841  LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 900

Query: 381  ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            +    +G+ + AK + E M+D     +C  +NI I    +  E   A  L  RMV   V 
Sbjct: 901  DGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 960

Query: 440  PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            PD  TYS  V   C +   ++ L  FR++    L  D + Y+ ++ GL +  ++ EA+ +
Sbjct: 961  PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVL 1020

Query: 500  FCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
            F  M K+ G +    ++N LI  L +   V++A ++ +    +G      T+  ++ G  
Sbjct: 1021 FNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1080

Query: 559  KLQRAKDLLVVLAQMLVEGCALDVEAY 585
               + +    V   M+  G + +   Y
Sbjct: 1081 LSGKPEHAYAVYQTMVTGGFSPNTGTY 1107


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 153/654 (23%), Positives = 280/654 (42%), Gaps = 91/654 (13%)

Query: 141  FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVK 195
            F+N+Y  +G    A++    M S G    V   N VL  + +  R G A  VF   E+  
Sbjct: 490  FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF--HELKA 547

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             G+ P+  T   +++   + ++ + A+  F  M +  C P+      +I  L    R D+
Sbjct: 548  MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDE 607

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  I  ++ ++ ++     Y  ++  L RE K++E + L + M   +  P+ +TY  +++
Sbjct: 608  AWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 667

Query: 316  CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN--------FLED 367
            CLC+N  ++DA D+L  M   G  P    +  ++ GL +  +++E+ +         + D
Sbjct: 668  CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 727

Query: 368  ------------KCG-----------YVTSPHNALLECCCNAGKFFLAKCILEKMADRK- 403
                        K G           Y   P +      C++    L + IL+K    K 
Sbjct: 728  YATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHS----LMEGILKKAGTEKS 783

Query: 404  ------IADC-----DSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                  IA       D +  P I+ LC+ ++  +A+EL+ +     V     +Y++ + G
Sbjct: 784  IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICG 843

Query: 452  KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
                   + A  +F ++       D  +Y+ L++ + +  +I E ++V   M + G   +
Sbjct: 844  LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYEST 903

Query: 512  SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              ++N +I GL   R++++AI L     S G S T  TY  ++ GL+K  R +D   +  
Sbjct: 904  YVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFN 963

Query: 572  QMLVEGCAL-----------------------------------DVEAYCILIQSMSEQN 596
            +ML  GC                                     D+++Y I+I ++ +  
Sbjct: 964  EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023

Query: 597  KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            +L D   +F  +++ GL PD  T   L+ GL    +L    S  N++     V +   YN
Sbjct: 1024 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1083

Query: 657  ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
             LI  L K G  ++A  + + +L KGW P+  T+  L+ G SV    DS   A+
Sbjct: 1084 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1137



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 153/675 (22%), Positives = 283/675 (41%), Gaps = 69/675 (10%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----GLAGNVEEMEG 117
           + + +I  L + +  + AL+ F+  + + R  HT  + C  +L L    G  G++ E+  
Sbjct: 135 AAEDVIHALRSADGPAEALERFRSAARRPRVVHTTAS-CNYMLDLMRDHGRVGDMAEVFD 193

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVL 173
           + Q         + +A +    +      V G +R     L  M   G  L+   +N ++
Sbjct: 194 VMQR-------QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV 246

Query: 174 GAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
             +V  K GF  + + VYK M+  G+VP+V T + L+    +   +E+ L   R M   G
Sbjct: 247 YFLV--KSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 304

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             PN  ++ I I+ L    R D++  IL EM + G + ++  +T +I +LC   ++ +A 
Sbjct: 305 VKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAK 364

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            +F  M+  D  PD +TY  L++   +N       +I   M   G       +  ++  L
Sbjct: 365 DVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDAL 424

Query: 353 CEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           C+VG+  E++   ++  + G V     +N+L+     A +F  A  + + M D      +
Sbjct: 425 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYM-DIHGPKPN 483

Query: 409 SWN--IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
            +   + I +  ++ E  KA +    M    +VPD    +A + G  K      A RVF 
Sbjct: 484 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 543

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC------------------ 508
           ++ A  +  D+I+Y+ +++   +  K  EAV++F  M +N C                  
Sbjct: 544 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAG 603

Query: 509 -----------------SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
                              +  ++N L+ GL    KV + + L    Y S       TY 
Sbjct: 604 RGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 663

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I+  L K     D L +L  M  +GC  D+ +Y  +I  + ++ +  +    F  M K 
Sbjct: 664 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 723

Query: 612 GLVPDRETMLSLLHGLAD----GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
            L+PD  T+ ++L            LH++       +      D S  + L+ G+ K+  
Sbjct: 724 -LIPDYATLCTILPSFVKIGLMKEALHIIK---EYFLQPGSKTDRSSCHSLMEGILKKAG 779

Query: 668 TSQASYLLDLMLGKG 682
           T ++    +++   G
Sbjct: 780 TEKSIEFAEIIASSG 794



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/552 (21%), Positives = 227/552 (41%), Gaps = 42/552 (7%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           +V    + NY+L+++ +  R+    + F  M ++    N  TF  +  GL     +  + 
Sbjct: 165 VVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 224

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
             L  M + GI L    Y  ++  L +     EA+ ++K+M    ++P   TY  L+   
Sbjct: 225 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAF 284

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVT 373
            +   ++    +L +M   G+ P    +   +R L +  +FDE+   L     + C    
Sbjct: 285 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDV 344

Query: 374 SPHNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
             H  L++  C+AG+   AK +  KM  +D+K  D  ++   +    +N E +   E+  
Sbjct: 345 ITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK-PDRVTYITLLDKFADNGESQSVMEIWN 403

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M       +   Y+A +   C++    +AL +F ++  + +V +  SY+ L+ G  + +
Sbjct: 404 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 463

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +  +A+E+F  M  +G   +  +  + I       +  KAI+   L  S G         
Sbjct: 464 RFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 523

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ GL K  R      V  ++   G + D   Y ++I+  S+ +K  +    F  M++ 
Sbjct: 524 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 583

Query: 612 GLVPD---------------------------RE--------TMLSLLHGLADGSQLHLV 636
             VPD                           +E        T  +LL GL    ++  V
Sbjct: 584 NCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 643

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              + ++   +   +   YN +++ L K G  + A  +L  M  KG +PD +++  ++  
Sbjct: 644 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 703

Query: 697 SVGEEIDSRRFA 708
            V EE  +  F+
Sbjct: 704 LVKEERYNEAFS 715



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 126/628 (20%), Positives = 252/628 (40%), Gaps = 88/628 (14%)

Query: 57   LRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
            + +N  PD      LI  L        A +IF  +  +   + T  TY  ++  LG  G 
Sbjct: 581  IENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLK-EMNLEPTDGTYNTLLAGLGREGK 639

Query: 112  VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
            V+E+  L + M    YP       +++     +  VN A+ +L +M + G    +  +N 
Sbjct: 640  VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNT 699

Query: 172  VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR---- 227
            V+  +V+E+R + +   ++ +M K  ++P+  TL  +L    +   ++ AL   +     
Sbjct: 700  VIYGLVKEER-YNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQ 757

Query: 228  -----------------MHKKGCCPNSRTFEIV---------------IKGLIANSRVDD 255
                             + K G   +    EI+               IK L    +  +
Sbjct: 758  PGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALE 817

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  ++ +    G+ L+   Y  +I  L  EN ++ A  LF  M+ L   PDE TY  L++
Sbjct: 818  AHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 877

Query: 316  CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT 373
             + +++R+++   + E+M   G   T   +  I+ GL +  + +++++   +    G+  
Sbjct: 878  AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 937

Query: 374  SP--HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
            +P  +  LL+    AG+                                  I  A  L  
Sbjct: 938  TPCTYGPLLDGLLKAGR----------------------------------IEDAENLFN 963

Query: 432  RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
             M+      +C  Y+  + G     N E    +F+ +  Q +  D  SY+ +++ LC+  
Sbjct: 964  EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023

Query: 492  KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            ++ + +  F  + + G      ++N+LI GL   +++++A+ L +     G      TY 
Sbjct: 1024 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1083

Query: 552  KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
             ++L L K  +A +   +  ++L +G   +V  Y  LI+  S           +  M+  
Sbjct: 1084 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1143

Query: 612  GLVPD------RETMLSLLHGLADGSQL 633
            G +P+       E M + L G +D  ++
Sbjct: 1144 GCLPNSSTCHIHELMKTFLKGDSDSYEI 1171


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 151/653 (23%), Positives = 278/653 (42%), Gaps = 89/653 (13%)

Query: 141  FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVK 195
            F+N+Y  +G    A++    M S G    V   N VL  + +  R G A  VF   E+  
Sbjct: 536  FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF--HELKA 593

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             G+ P+  T   +++   + ++ + A+  F  M +  C P+      +I  L    R D+
Sbjct: 594  MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 653

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  I  ++ ++ ++     Y  ++  L RE K++E + L + M   +  P+ +TY  +++
Sbjct: 654  AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 713

Query: 316  CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE--------------------- 354
            CLC+N  ++DA D+L  M   G  P    +  ++ GL +                     
Sbjct: 714  CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 773

Query: 355  -------------VGKFDESVNFLEDKCGYVTSPHNALLECCCNA-GKFFLAKCILEK-- 398
                         +G   E+++ ++D   Y   P +      C++  +  L K  +EK  
Sbjct: 774  YATLCTILPSFVKIGLMKEALHIIKD---YFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 830

Query: 399  -----MADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
                 +A   I   D +  P I+ LC+ ++  +A+EL+ +     V      Y++ + G 
Sbjct: 831  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 890

Query: 453  CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                  + A  +F ++       D  +Y+ L++ + +  +I E ++V   M + G   + 
Sbjct: 891  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 950

Query: 513  SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             ++N +I GL   R++++AI L     S G S T  TY  ++ GL+K  R +D   +  +
Sbjct: 951  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 1010

Query: 573  MLVEGCAL-----------------------------------DVEAYCILIQSMSEQNK 597
            ML  GC                                     D+++Y I+I ++ +  +
Sbjct: 1011 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 1070

Query: 598  LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
            L D   +F  +++ GL PD  T   L+ GL    +L    S  N++     V +   YN 
Sbjct: 1071 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1130

Query: 658  LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
            LI  L K G  ++A  + + +L KGW P+  T+  L+ G SV    DS   A+
Sbjct: 1131 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1183



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 145/633 (22%), Positives = 279/633 (44%), Gaps = 30/633 (4%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----GLAGNVEEMEG 117
           + + +I  L + +  + AL+ F+  + + R   T  + C  +L+L    G  G++ E+  
Sbjct: 181 AAEDVIHALRSADGPAEALERFRSAARKPRVAQTTAS-CNYMLELMRGHGRVGDMAEVFD 239

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVL 173
           + Q         + +A +    +      V G +R     L  M   G  L+   +N ++
Sbjct: 240 VMQR-------QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV 292

Query: 174 GAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
             +V  K GF  + + VY+ M+  G+VP+V T + L+    +   +E+ L   R M   G
Sbjct: 293 YFLV--KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 350

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             PN  ++ I I+ L    R D++  IL +M + G + ++  +T +I +LC   ++ +A 
Sbjct: 351 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 410

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            +F  M+  D  PD +TY  L++   +N       +I   M   G       +  ++  L
Sbjct: 411 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 470

Query: 353 CEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           C+VG+  E++   ++  + G V     +N+L+     A +F  A  + + M D      +
Sbjct: 471 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM-DIHGPKPN 529

Query: 409 SWN--IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
            +   + I +  ++ E  KA +    M    +VPD    +A + G  K      A RVF 
Sbjct: 530 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 589

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++ A  +  D+I+Y+ +++   +  K  EAV++F  M +N C     + N LI  L    
Sbjct: 590 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 649

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           + D+A R+           T  TY  ++ GL +  + K+++ +L +M       ++  Y 
Sbjct: 650 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 709

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS---GINK- 642
            ++  + +   + D       M   G +PD  +  ++++GL    + +   S    + K 
Sbjct: 710 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 769

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           L+ D   L + + + +  GL KE L     Y L
Sbjct: 770 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 802



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 115/555 (20%), Positives = 231/555 (41%), Gaps = 42/555 (7%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K  +     + NY+LE++    R+    + F  M ++    N  TF  +  GL     + 
Sbjct: 208 KPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 267

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +   L  M + GI L    Y  ++  L +     EA+ ++++M    ++P   TY  L+
Sbjct: 268 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 327

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCG 370
               +   ++    +L +M   G+ P    +   +R L +  +FDE+   L     + C 
Sbjct: 328 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 387

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                H  L++  C+AG+   AK +  KM  +D+K  D  ++   +    +N + +   E
Sbjct: 388 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK-PDRVTYITLLDKFGDNGDSQSVME 446

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   M       +   Y+A +   C++    +AL +F ++  + +V +  SY+ L+ G  
Sbjct: 447 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 506

Query: 489 QVEKITEAVEVFCCM-------------------SKNGCSLSS----------------S 513
           + ++  +A+E+F  M                    K+G S+ +                 
Sbjct: 507 KADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 566

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           + N +++GL    ++  A R+     + G S  T TYT ++    K  +  + + +   M
Sbjct: 567 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 626

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           +   C  DV A   LI ++ +  +  +    F  + +  L P   T  +LL GL    ++
Sbjct: 627 IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 686

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
             V   + ++   +   +   YN +++ L K G  + A  +L  M  KG +PD +++  +
Sbjct: 687 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 746

Query: 694 VGSSVGEEIDSRRFA 708
           +   V EE  +  F+
Sbjct: 747 IYGLVKEERYNEAFS 761



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/596 (19%), Positives = 243/596 (40%), Gaps = 77/596 (12%)

Query: 61   LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
            L+ + LI  L        A +IF  +  +   + T  TY  ++  LG  G V+E+  L +
Sbjct: 636  LAVNSLIDTLYKAGRGDEAWRIFYQLK-EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 694

Query: 121  NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
             M    YP       +++     +  VN A+ +L +M + G    +  +N V+  +V+E+
Sbjct: 695  EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 754

Query: 181  RGFADFVFVYKEMVKAGIVPNVDTL---------------------NYLLEVLFETNR-- 217
            R + +   ++ +M K  ++P+  TL                     +Y L+   +T+R  
Sbjct: 755  R-YNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSS 812

Query: 218  -------------IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
                         IE +++    +   G   +      +IK L    +  ++  ++ +  
Sbjct: 813  CHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFK 872

Query: 265  DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
              G+ L+   Y  +I  L  EN ++ A  LF  M+ L   PDE TY  L++ + +++R++
Sbjct: 873  SFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIE 932

Query: 325  DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALL 380
            +   + E+M   G   T   +  I+ GL +  + +++++   +    G+  +P  +  LL
Sbjct: 933  EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 992

Query: 381  ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
            +    AG+                                  I  A  L   M+      
Sbjct: 993  DGLLKAGR----------------------------------IEDAENLFNEMLEYGCKA 1018

Query: 441  DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
            +C  Y+  + G     N E    +F+ +  Q +  D  SY+ +++ LC+  ++ + +  F
Sbjct: 1019 NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 1078

Query: 501  CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
              + + G      ++N+LI GL   +++++A+ L +     G      TY  ++L L K 
Sbjct: 1079 RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1138

Query: 561  QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
             +A +   +  ++L +G   +V  Y  LI+  S           +  M+  G +P+
Sbjct: 1139 GKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 239/524 (45%), Gaps = 12/524 (2%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR- 238
           +R   + V +++ ++  G  P+    +  ++   +T  +  ALD  R M  K   P S+ 
Sbjct: 252 ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQE 311

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  VI   +    ++++V ++ EM   GI + +   T ++   C+ N+L +A+ LF  M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               L PD++ +  ++   C+N+ ++ A +    M  + + P+  +   +++G  +    
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431

Query: 359 DESVNFLEDKC------GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
           + ++    D        G++    N +    C  GK   A   L+ M  + I  +   +N
Sbjct: 432 EAALEIFNDSFESWIAHGFMC---NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             +   C  + +  A  +   M+   + P+  TYS  + G  K  + ++A  V  Q++A 
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-CSLSSSSFNILIYGLCVMRKVDK 530
           +   + + Y+ ++ GLC+V + ++A E+   + K    S+S +S+N +I G   +   D 
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+        +G S    T+T ++ G  K  R    L +  +M      LD+ AY  LI 
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              ++N +K     F+ + + GL+P+     SL+ G  +  ++        K+V+D    
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           D   Y  +I+GL K+G  + AS L   +L  G VPD   H +LV
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 143/639 (22%), Positives = 255/639 (39%), Gaps = 92/639 (14%)

Query: 73  TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           T DL  AL + + +  +     + +TY  +I+     GN+EE   +   MV    P    
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           A  SLV  +     +  A+               D+FN                      
Sbjct: 347 AATSLVNGYCKGNELGKAL---------------DLFN---------------------R 370

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G+ P+    + ++E   +   +E A++ + RM      P+S     +I+G +    
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430

Query: 253 VDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            + ++ I  + F+  I      + C  I  + C++ K++ A    KMM    + P+ + Y
Sbjct: 431 PEAALEIFNDSFESWIA---HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC----EVGKFD-----ES 361
             ++   C    +D A  I  +M+  GL P +  +  ++ G      E   +D      +
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCE 419
            NF  ++  Y     N ++   C  G+   AK +L+ +    R    C S+N  I    +
Sbjct: 548 SNFEANEVIY-----NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             +   A E    M  +   P+  T+++ + G CK    + AL +  ++ +  L LD  +
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y  L++G C+   +  A  +F  + + G   + S +N LI G   + K+D AI L     
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + G S    TYT ++ GL+     KD  + LA  L                         
Sbjct: 723 NDGISCDLFTYTTMIDGLL-----KDGNINLASDL------------------------- 752

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                ++ ++  G+VPD    + L++GL+   Q    S  + ++       +  +Y+ +I
Sbjct: 753 -----YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            G  +EG  ++A  L D ML KG V D T   LLV   V
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRV 846



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 108/533 (20%), Positives = 214/533 (40%), Gaps = 43/533 (8%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
             NYLL       R++ A+D F  M  +   P       V+  L+ ++ +D++  I  +M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
             +G+  +      ++    RE K EEA+++F+ + +    PD L +   +   C+   L
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290

Query: 324 DDANDILEDMI-VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----PHNA 378
             A D+L +M   +G+  + + +  ++    + G  +E+V  +++  G+          +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C   +   A  +  +M +  +A D   +++ + W C+N E+ KA E   RM    
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P        + G  K  + E AL +F   S +S +      +K+    C+  K+  A 
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAAT 469

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
                M + G   +   +N ++   C M+ +D A  + S     G      TY+ ++ G 
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE-----------QNKLKD------ 600
            K +  ++   V+ QM       +   Y  +I  + +           QN +K+      
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589

Query: 601 CALF-------------------FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           C  +                   +  M + G  P+  T  SL++G    +++ L     +
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++ S    LD   Y  LI+G  K+     A  L   +   G +P+ + +  L+
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 96/469 (20%), Positives = 186/469 (39%), Gaps = 18/469 (3%)

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
           R F  ++   I N R+D +V   G M D  +   + +   ++  L R N ++EA  ++  
Sbjct: 170 RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M  + +  D +T + L+       + ++A  I   ++  G  P   +F   V+  C+   
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP---- 413
              +++ L +  G +  P  A  E   +    F+ +  +E+ A R + +   + IP    
Sbjct: 290 LVMALDLLREMRGKLGVP--ASQETYTSVIVAFVKEGNMEE-AVRVMDEMVGFGIPMSVI 346

Query: 414 -----IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
                +   C+  E+ KA +L  RM    + PD   +S  V   CK    E A+  + ++
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF--NILIYGLCVMR 526
            +  +   S+    +++G  + E    A+E+F   + +  S  +  F  N +    C   
Sbjct: 407 KSVRIAPSSVLVHTMIQGCLKAESPEAALEIF---NDSFESWIAHGFMCNKIFLLFCKQG 463

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           KVD A     +    G       Y  +ML   +++       + ++ML +G   +   Y 
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           ILI    +    ++     N M  +    +     ++++GL    Q       +  L+ +
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583

Query: 647 SEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               +  + YN +I+G  K G T  A      M   G  P+  T   L+
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 87/439 (19%), Positives = 179/439 (40%), Gaps = 14/439 (3%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I  ++ N+ VD S          G +L    +  ++    R  +++ A+  F +M    
Sbjct: 147 LIPNVMVNNLVDSSKR-------FGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRK 199

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           ++P       +++ L  +  +D+A +I   M++IG+   +     ++R      K +E+V
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAV 259

Query: 363 NFLEDKCGYVTSPHNAL----LECCCNAGKFFLAKCILEKMADR--KIADCDSWNIPIRW 416
                       P   L    ++  C      +A  +L +M  +    A  +++   I  
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
             +   + +A  ++  MV   +       ++ V G CK      AL +F ++  + L  D
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            + +S +VE  C+  ++ +A+E +  M     + SS   + +I G       + A+ + +
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
            ++ S  ++      KI L   K  +       L  M  +G   +V  Y  ++ +     
Sbjct: 440 DSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            +      F+ M++ GL P+  T   L+ G             IN++ + +   +  +YN
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558

Query: 657 ILINGLWKEGLTSQASYLL 675
            +INGL K G TS+A  +L
Sbjct: 559 TIINGLCKVGQTSKAKEML 577



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 134/282 (47%), Gaps = 9/282 (3%)

Query: 77  SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE-RYPNVREALI 135
           S A ++ + +  +KR+  +  +Y  +I      G+ +      + M +  + PNV     
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV-TFT 629

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKE 192
           SL+  F    R++ A+ +   M S   KL +  +    GA+++   +K        ++ E
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY----GALIDGFCKKNDMKTAYTLFSE 685

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           + + G++PNV   N L+       ++++A+D +++M   G   +  T+  +I GL+ +  
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           ++ +  +  E+ DLGI  +   +  ++  L ++ +  +A ++ + M+  D+ P+ L Y  
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           +I        L++A  + ++M+  G+   D VF  +V G  E
Sbjct: 806 VIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/399 (19%), Positives = 162/399 (40%), Gaps = 7/399 (1%)

Query: 180 KRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K+G  D    + K M + GI PNV   N ++        ++ A   F  M +KG  PN+ 
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-M 297
           T+ I+I G   N    ++  ++ +M     +     Y  II  LC+  +  +A  + + +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           ++         +Y  +I+   +    D A +   +M   G +P    F  ++ G C+  +
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640

Query: 358 FDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
            D ++    +    +       + AL++  C       A  +  ++ +  +  +   +N 
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I       ++  A +L  +MV   +  D  TY+  + G  K  N   A  ++ ++    
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           +V D I +  LV GL +  +  +A ++   M K   + +   ++ +I G      +++A 
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           RL       G  +  + +  ++ G V+   A   +  LA
Sbjct: 821 RLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLA 859


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 150/677 (22%), Positives = 279/677 (41%), Gaps = 55/677 (8%)

Query: 39  TDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDN-TNDLSSALKIFKWVSIQKRFQHTAD 97
           T +IK  ++      +++   N   DHLI VL N  ND +  L  F W  +++  + + +
Sbjct: 78  TAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVLAFFDWARVRR--EPSLE 135

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
             C +I+ + +  N                       + L    V+ Y +N  + + V M
Sbjct: 136 ARC-IIIHIAVVSND----------------------LRLAHELVHDYFLNSKLEIGVKM 172

Query: 158 NS------------GGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVD 203
                         G   ++ D+F  VL  I  + E R   D +  Y      G+V  VD
Sbjct: 173 TQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSY------GLVVTVD 226

Query: 204 TLN-YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           + N +L  +   +  IE A+  F    + G   N+ ++ I+I  L    +V ++  +L +
Sbjct: 227 SCNAFLSRIANNSEGIEMAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ 283

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M       ++  Y+ +I   C   +L++A++L   M+   L P+  TY  +I  LC+  +
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
             +A  +L +M+   + P + V+  ++ G  ++G    +  + ++      SP    +  
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L++     GK    + +  +M  R +  D  ++   I   C+  E+  A+ L   MV   
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+  TY A + G CK    + A  +  ++  + L L+   Y+ +V G+C+   I +A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           ++   M   G    + ++  +I   C +  +DKA +L       G   T  T+  +M G 
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
             L   +D   +L  ML +G   D   Y  L++    +N +      +  M   G+ PD 
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
            T   L+ G      L        +++    V   + YN LI   +K+    +A  L + 
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEE 703

Query: 678 MLGKGWVPDATTHGLLV 694
           M G G V D   +   V
Sbjct: 704 MRGHGLVADGEIYNFFV 720



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 232/531 (43%), Gaps = 37/531 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VK 124
           L R+ +N+  +  A+K+F    I         +Y  +I  L   G V+E   L   M  +
Sbjct: 232 LSRIANNSEGIEMAIKVFCEYGIS----WNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR 287

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
              P+V  +  +++  + +   +  A++++ +M   G K +   +N ++  + +  + F 
Sbjct: 288 SSTPDV-VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSF- 345

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           +   V +EM+   I+P+      L+   F+   + +A   F  M  K   P+  T+  +I
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           +G     +V +  ++  EM   G++ +   YT +I + C+  ++  A  L   M  + + 
Sbjct: 406 QGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMT 465

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  LI+ LC++  LD AN++L++M   GL     ++  +V G+C+ G  ++++  
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           +++       P                              D  ++   I   C   +I 
Sbjct: 526 MKEMEVAGIDP------------------------------DAITYTTVIDAYCRLGDID 555

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           KA++LL  M+   + P   T++  + G C L   ED  R+   +  + +V D+I+Y+ L+
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +  C    +    +++  M   G +  S+++NILI G C  R + +A  L       G  
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            T ++Y  ++    K ++  +   +  +M   G   D E Y   +    E+
Sbjct: 676 PTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEE 726



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 201/449 (44%), Gaps = 22/449 (4%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           +L  ALK+   + I K  +    TY  +IL L   G   E E + + M+ ++        
Sbjct: 308 ELKKALKLMDDMQI-KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVF 188
            +L+  F     V  A +    M S         +  ++      G ++E +        
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN------- 419

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EM+  G+ P+  T   L++V  +   + +A      M + G  PN  T+  +I GL 
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +  +D +  +L EM   G+QL +  Y  ++  +C+   +E+AI+L K M    + PD +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF---DESVNFL 365
           TY  +I+  C    +D A+ +L++M+  GL PT   F  ++ G C +G     D  + ++
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 366 EDKCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEE 422
            +K G V     +N L++  C          I ++M ++ +A D +++NI I+  C+   
Sbjct: 600 LEK-GIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +++A+ L   M+    VP   +Y+A +    K   + +A  +F ++    LV D   Y+ 
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNF 718

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            V+ +C  E   E     C  +   C L+
Sbjct: 719 FVD-MCYEEGDVEITLNLCDEAIEKCLLN 746


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 227/493 (46%), Gaps = 10/493 (2%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M +  I+P++ + N ++  L +  R+E A+D    M    C PNS T+ I++ GL    R
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V++++ +LGEM   G+++++  Y+ +I   C +  L+    LF  M    + P+ + Y  
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN  C+     +A  +L  M   G+ P    +  ++ GLC+ G+  ++++  +      
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAY 427
             P    +N L+   C  G    A  I E M ++ K  +  S+N  I  LC N ++ +A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 428 ELLGRMVVSS--VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           +L   ++     V PD  T++  + G CK    + A+ ++  +  +    +  +   L+ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
              +   I +A+E++  + K G   SS++++++I G C M  ++ A  L S    SG S 
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T   Y  +M  L K    +    +  +M    C  D  ++ I+I    +   +       
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           N M + GL PD  T  S ++ L+   Q+       + +++     D+ +Y+ LI G    
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGF--- 477

Query: 666 GLTSQASYLLDLM 678
           GL  +   +++L+
Sbjct: 478 GLNDEIEEVINLL 490



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 223/504 (44%), Gaps = 14/504 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N ++  + +EKR     V +  EM  +   PN  T   L++ L +  R+E A+     M
Sbjct: 13  YNTIINGLCKEKR-LEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEM 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            +KG   +   +  +I G  +   +D   ++  EM + GI   +  Y+C+I   C++   
Sbjct: 72  KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLW 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA  +   M    + PD  TY  +I  LC++ R   A D+ + M   G  P+   +  +
Sbjct: 132 REATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVL 191

Query: 349 VRGLCEVGKFDESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRK 403
           + GLC+ G   ++       LE         +N L+   CN GK   A K     + D  
Sbjct: 192 INGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGN 251

Query: 404 IADCD--SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
             + D  ++N  I+ LC+   + KA E+   M+      +  T    +    K    + A
Sbjct: 252 YVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKA 311

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           + ++++V    LV  S +YS +++G C++  +  A  +F  M  +G S +   +N L+  
Sbjct: 312 MELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMAS 371

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGC 578
           LC    +++A RL      S     T ++  ++ G +K   +  AK+LL  + QM   G 
Sbjct: 372 LCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQM---GL 428

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D   Y   I  +S+  ++++    F+ M+ +G+ PD     SL+ G     ++  V +
Sbjct: 429 TPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVIN 488

Query: 639 GINKLVSDSEVLDSSMYNILINGL 662
            + ++     +LD  + N ++  L
Sbjct: 489 LLRQMADMGVILDLEITNSILTFL 512



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 226/511 (44%), Gaps = 13/511 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++       R+  A+ +LV M     + +   + +++  + +E R   + + +  EM +
Sbjct: 15  TIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR-VEEAMRLLGEMKR 73

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+  +V   + L+        ++     F  M +KG  PN   +  +I G        +
Sbjct: 74  KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWRE 133

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + ++L  M + GIQ ++  YTC+I  LC++ +  +A+ LF +M      P  +TY  LIN
Sbjct: 134 ATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLIN 193

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGY 371
            LC+   + DA  I E M+  G       +  ++ GLC  GK DE++    + LED  G 
Sbjct: 194 GLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED--GN 251

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKA 426
              P     N +++  C  G+   A  I + M +R    +  + +I I    ++  I KA
Sbjct: 252 YVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKA 311

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            EL  R+    +VP   TYS  + G CK+     A  +F ++    L      Y+ L+  
Sbjct: 312 MELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMAS 371

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+   + +A  +F  M ++ C   + SFNI+I G      +  A  L +     G +  
Sbjct: 372 LCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPD 431

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY+  +  L KL + ++       M+  G   D   Y  LI+     +++++      
Sbjct: 432 AYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLR 491

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQ-LHLV 636
            M   G++ D E   S+L  L + ++ LH++
Sbjct: 492 QMADMGVILDLEITNSILTFLCNSAEHLHVM 522



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 147/304 (48%), Gaps = 12/304 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEM 193
           +L+    N+ +++ AM++  ++   G  +  DV  FN V+  + +E R     V +Y  M
Sbjct: 225 TLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGR-LDKAVEIYDTM 283

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G   N+ T + L+    ++  I+ A++ ++R+HK G  P+S T+ ++I G      +
Sbjct: 284 IERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHML 343

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           + +  +   M   G+   L  Y  ++  LC+E+ LE+A RLF+ M+  +  PD +++  +
Sbjct: 344 NFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIM 403

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+   +   +  A ++L DM  +GLTP    +   +  L ++G+ +E+    +       
Sbjct: 404 IDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGI 463

Query: 374 SPHNALLECCCNAGKFFLAKCI------LEKMADRK-IADCDSWNIPIRWLCENEEIRKA 426
           +P N + +       F L   I      L +MAD   I D +  N  + +LC + E    
Sbjct: 464 TPDNHVYDSLIKG--FGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHV 521

Query: 427 YELL 430
            ELL
Sbjct: 522 MELL 525



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 167/378 (44%), Gaps = 15/378 (3%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R   A+ +   M   G + S   +NV++  + +E     D   +++ M++ G    V + 
Sbjct: 165 RARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEG-CIGDAFKIFETMLEKGKRLEVVSY 223

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N L+  L    +++ A+  F  + + G    P+  TF  VI+GL    R+D +V I   M
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283

Query: 264 FDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            + G    L  +TC  +I    +   +++A+ L+K +  L L+P   TY  +I+  C+  
Sbjct: 284 IERGSFGNL--FTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHN 377
            L+ A  +   M + GL+PT   +  ++  LC+    +++        E  C   T   N
Sbjct: 342 MLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFN 401

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            +++    AG    AK +L  M    +  D  +++  I  L +  ++ +A      M+ S
Sbjct: 402 IMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIAS 461

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK---I 493
            + PD   Y + + G       E+ + + RQ++   ++LD    + ++  LC   +   +
Sbjct: 462 GITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHV 521

Query: 494 TEAVEVFCCMSKNGCSLS 511
            E +  F   S  G S+S
Sbjct: 522 MELLPNFSSESSGGTSIS 539


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 215/462 (46%), Gaps = 9/462 (1%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           A K FKWV  Q+    +      ++  LG+A    E E +   + K RY       I L 
Sbjct: 2   AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAG 197
             + +   +  ++  L  M      L+   +N ++ A V  K G+      VY+ M ++G
Sbjct: 62  RGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFV--KAGYTQKALAVYRVMGQSG 119

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P+  T N L+    +  R++S    F  M  + C PN  T+ I+I  +     V+ ++
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +  +M   G +  +  YT +I  L +   +++A  LF+ M +  L+   + Y  LI+ L
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK----CGYVT 373
             + R D A  +  +M+  GL P    F  +V GL   G+  E+    ++     C    
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 374 SPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
           + +N L++  C + +   A  I  ++  D  + D  ++N  +  LC++  I  A+ LLG 
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M  +   PD   Y+  + G  K    E+A ++  ++ +     D ++Y+ L++  C+  +
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           I +A+ +F  +S  G + ++ ++N ++ GLC+  +VD+A +L
Sbjct: 420 IEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKL 460



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 174/381 (45%), Gaps = 16/381 (4%)

Query: 344 VFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           +F+++ RG    G  ++SV  L+     +C    S +N+L++    AG    A  +   M
Sbjct: 56  IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               +  D  ++N+ +    + + +   ++L   M   +  P+  TYS  +   CK    
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E AL+VF  + ++    +  +Y+ +++GL +   + +A  +F  M+  G   +   +N L
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I+GL    + D A +L     S G      T+T ++ GL    RA +   +  +    GC
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
           ALDV  Y +LI ++ +  +L +    F  + + GLVPD  T  +L+ GL    ++H    
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS- 697
            +  +       D ++YN LI+GL K G   +A  LL  M   G+ PD  T+  L+  S 
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESC 415

Query: 698 ----------VGEEIDSRRFA 708
                     + EEI ++ FA
Sbjct: 416 KGGRIEDALRLFEEISAKGFA 436



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 156/314 (49%), Gaps = 11/314 (3%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTL 205
           V  A++V ++M S G + ++  +  ++  +   K G  D   F+++EM   G+V      
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGL--GKSGHVDKAFFLFEEMTSEGLVATRVVY 232

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L+  L  + R ++A   FR M  KG  P+  TF  ++ GL    R  ++  I  E  D
Sbjct: 233 NSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARD 292

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           +G  L+++ Y  +I  LC+  +L+EA  +F  +    L+PD  T+  L++ LC++ R+ D
Sbjct: 293 VGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHD 352

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A  +L DM   G TP   V+  ++ GL + G+ +E+   L +       P    +N L++
Sbjct: 353 AFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM---VVSSV 438
             C  G+   A  + E+++ +  A+  ++N  +  LC    + +AY+L   M    V  V
Sbjct: 413 ESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGV 472

Query: 439 V-PDCATYSAFVLG 451
           + PD  TY+  + G
Sbjct: 473 IDPDFVTYTTLLNG 486


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 150/677 (22%), Positives = 279/677 (41%), Gaps = 55/677 (8%)

Query: 39  TDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDN-TNDLSSALKIFKWVSIQKRFQHTAD 97
           T +IK  ++      +++   N   DHLI VL N  ND +  L  F W  +++  + + +
Sbjct: 78  TAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVLAFFDWARVRR--EPSLE 135

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
             C +I+ + +  N                       + L    V+ Y +N  + + V M
Sbjct: 136 ARC-IIIHIAVVSND----------------------LRLAHELVHDYFLNSKLEIGVKM 172

Query: 158 NS------------GGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVD 203
                         G   ++ D+F  VL  I  + E R   D +  Y      G+V  VD
Sbjct: 173 TQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSY------GLVVTVD 226

Query: 204 TLN-YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           + N +L  +   +  IE A+  F    + G   N+ ++ I+I  L    +V ++  +L +
Sbjct: 227 SCNAFLSRIANNSEGIEMAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ 283

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M       ++  Y+ +I   C   +L++A++L   M+   L P+  TY  +I  LC+  +
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
             +A  +L +M+   + P + V+  ++ G  ++G    +  + ++      SP    +  
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L++     GK    + +  +M  R +  D  ++   I   C+  E+  A+ L   MV   
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P+  TY A + G CK    + A  +  ++  + L L+   Y+ +V G+C+   I +A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           ++   M   G    + ++  +I   C +  +DKA +L       G   T  T+  +M G 
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
             L   +D   +L  ML +G   D   Y  L++    +N +      +  M   G+ PD 
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
            T   L+ G      L        +++    V   + YN LI   +K+    +A  L + 
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEE 703

Query: 678 MLGKGWVPDATTHGLLV 694
           M G G V D   +   V
Sbjct: 704 MRGHGLVADGEIYNFFV 720



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 232/531 (43%), Gaps = 37/531 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VK 124
           L R+ +N+  +  A+K+F    I         +Y  +I  L   G V+E   L   M  +
Sbjct: 232 LSRIANNSEGIEMAIKVFCEYGIS----WNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR 287

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
              P+V  +  +++  + +   +  A++++ +M   G K +   +N ++  + +  + F 
Sbjct: 288 SSTPDV-VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSF- 345

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           +   V +EM+   I+P+      L+   F+   + +A   F  M  K   P+  T+  +I
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           +G     +V +  ++  EM   G++ +   YT +I + C+  ++  A  L   M  + + 
Sbjct: 406 QGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMT 465

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  LI+ LC++  LD AN++L++M   GL     ++  +V G+C+ G  ++++  
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           +++       P                              D  ++   I   C   +I 
Sbjct: 526 MKEMEVAGIDP------------------------------DAITYTTVIDAYCRLGDID 555

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           KA++LL  M+   + P   T++  + G C L   ED  R+   +  + +V D+I+Y+ L+
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +  C    +    +++  M   G +  S+++NILI G C  R + +A  L       G  
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            T ++Y  ++    K ++  +   +  +M   G   D E Y   +    E+
Sbjct: 676 PTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEE 726


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/537 (23%), Positives = 232/537 (43%), Gaps = 66/537 (12%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +LG++V+ K  +   + +++ M   GI  N  TLN L+       +I SA   F ++
Sbjct: 52  FGKILGSLVKTKH-YPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKI 110

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P+  T+  +I+GL  N +V +S++    +   GI+L+   Y  +I  LC+  + 
Sbjct: 111 LKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQT 170

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A+RL + +      PD + Y  +I+ LC++  + DA D+  +M    + P    +  +
Sbjct: 171 GPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSL 230

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           + G C VG+ D++   L +      +P+                 C    + D       
Sbjct: 231 IYGFCIVGQLDKAFGLLNEMVLKNVNPN----------------VCTFNTLVDG------ 268

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
                   LC+  ++R+A  L+  M+   V PD  TY+A + G   +     A  VF  +
Sbjct: 269 --------LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIM 320

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           +   +  D  SYS ++ GL +++ + EA+++F  M          +++ LI GLC   ++
Sbjct: 321 AQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRI 380

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           + A++     +  G      TYT ++  L K  +    + +L ++  +G   ++  Y IL
Sbjct: 381 NSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL 440

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           +  + +  +L D    F  ++  G                                    
Sbjct: 441 VDGLCKDGRLTDAQKVFQDLLMKG-----------------------------------H 465

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
            +D   Y+I+INGL KE L  +A  LL  M  KG VPDA  +  ++ +   ++++ +
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDK 522



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 122/272 (44%)

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A +   RM+     P    +   +    K  +Y   + +F+++    +  + I+ + 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+   C + +I  A  VF  + K G      ++  LI GLC+  +V +++       S G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 +Y  ++ GL K+ +    L +L ++  E C  DV  Y  +I  + +   ++D  
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             +  M +  + P+  T  SL++G     QL      +N++V  +   +   +N L++GL
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            KEG   +A  L+ +M+ +G  PD  T+  L+
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALM 301



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 38/238 (15%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  MI  L     ++E   L + M  E   P+V  A  SL+       R+N A++ +  
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVV-AYSSLIDGLCKSGRINSALKYV-- 387

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
                                              EM   G  PNV T   L++ L +++
Sbjct: 388 ----------------------------------DEMHDRGQPPNVITYTSLIDALCKSH 413

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+   +++  +G   N  T+ I++ GL  + R+ D+  +  ++   G  +++  Y+
Sbjct: 414 QVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYS 473

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
            +I  LC+E+  +EA+ L   M     +PD + YE +IN   E    D A  +L +MI
Sbjct: 474 IMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 2/138 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     SL+ +    ++V+ A+ +L  +   G + ++  +N+++  + ++ R   D  
Sbjct: 397 PNVI-TYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGR-LTDAQ 454

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            V+++++  G   +V T + ++  L + +  + AL    +M  KGC P++  +E +I   
Sbjct: 455 KVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF 514

Query: 248 IANSRVDDSVSILGEMFD 265
                 D +  +L EM D
Sbjct: 515 FEKDMNDKAEKLLREMID 532


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 259/586 (44%), Gaps = 32/586 (5%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE--RYPNVREALIS 136
           +L  F WV    +F+H    Y           N++    + Q MV+       ++EA ++
Sbjct: 121 SLSFFNWVIGFSKFRHFMRLYIVCATTFLNNDNLDRATEVMQCMVRSFSEIGKLKEA-VN 179

Query: 137 LVFSFVNHYRVNGAMRVL-----VNMNSGGFKLSVDVFNVVLG-AIVEEKRGFADFVFVY 190
           +V    NH  V  A R+L     V +  G    +  VF+ +L  A+V +   +   V  Y
Sbjct: 180 MVIEMQNHGLVLKA-RILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGY 238

Query: 191 -------------KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
                        K+M++ G   +  T   ++    E   +  A   F++  + G  PN 
Sbjct: 239 CRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNL 298

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-K 296
             F  +I GL     +  +  +L EM   G +  +  +T +I  LC++   E+A RLF K
Sbjct: 299 INFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 358

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           ++R+ +  P+  TY  +IN  C+  +L+ A  +L  M   GL P  + +  ++ G C+ G
Sbjct: 359 LVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAG 418

Query: 357 KFDESVNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
            F  +   ++   K G+  +   +NA+++  C  G+F  A  +L +     + AD  ++ 
Sbjct: 419 NFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYT 478

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           I I   C   + ++A  +  RM    + PD  TY+  +   C+    E++ ++F +    
Sbjct: 479 ILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGL 538

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            L+    +Y+ ++ G C+   I+ A++ F  M   GC   S ++  LI GLC   K+D+A
Sbjct: 539 GLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEA 598

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
            +L      +G S    T   +     K   +   +++L ++  +   L +     LI+ 
Sbjct: 599 CQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK---LWIRTVNTLIRK 655

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           +  + K+   ALFF+ ++   L  DR T+ +      + ++  LVS
Sbjct: 656 LCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVS 701



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 214/486 (44%), Gaps = 22/486 (4%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM   G+V     LN++++V      ++ A   F  M  +   P+S ++++++ G     
Sbjct: 183 EMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMG 242

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R+ D    L +M + G  ++ +  T +I     +  +  A   FK    + L P+ + + 
Sbjct: 243 RISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFS 302

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLE---- 366
            LIN LC+   +  A ++LE+M+  G  P       ++ GLC+ G  +++   FL+    
Sbjct: 303 SLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 362

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
           D        +  ++   C   K   A+ +L +M ++  + + +++   I   C+     +
Sbjct: 363 DNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGR 422

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AYEL+  M      P+  TY+A + G CK   + +A ++ R+     L  D ++Y+ L+ 
Sbjct: 423 AYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILIS 482

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+     +A+ +F  M K G      ++N+LI   C  +KV+++ +L   A   G   
Sbjct: 483 EFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLP 542

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TYT ++ G  +       +    +M   GC  D   Y  LI  +  ++KL +    +
Sbjct: 543 TKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLY 602

Query: 606 NVMVKAGLVP----------------DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
             M+  GL P                D  T + +L  L     +  V++ I KL S+ +V
Sbjct: 603 ETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKV 662

Query: 650 LDSSMY 655
             ++++
Sbjct: 663 GVAALF 668



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 123/539 (22%), Positives = 216/539 (40%), Gaps = 55/539 (10%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL------- 212
            G  +S+  FN V+G        F  F+ +Y  +V A    N D L+   EV+       
Sbjct: 116 AGSVVSLSFFNWVIGF-----SKFRHFMRLY--IVCATTFLNNDNLDRATEVMQCMVRSF 168

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            E  +++ A++    M   G    +R    VI   +A   VD +  +  EM D  +  + 
Sbjct: 169 SEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDS 228

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + Y  ++   CR  ++ +  R  K M       D  T   +I+   E   ++ A    + 
Sbjct: 229 TSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKK 288

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
            + +GL P    F  ++ GLC++G   ++   LE+       P    H AL++  C  G 
Sbjct: 289 WVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGW 348

Query: 389 FFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
              A  +  K+  +D    +  ++   I   C+ E++ +A  LL RM    +VP+  TY+
Sbjct: 349 TEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYT 408

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             + G CK  N+  A  +   +  +    +  +Y+ +++GLC+  +  EA ++     K+
Sbjct: 409 CLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKS 468

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G      ++ ILI   C  R+ D                                  K  
Sbjct: 469 GLHADKVTYTILISEFC--RQTDN---------------------------------KQA 493

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L + ++M   G   D+  Y +LI +   Q K+++    F   V  GL+P +ET  S++ G
Sbjct: 494 LAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICG 553

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                 +       +K+       DS  Y  LI+GL  E    +A  L + M+  G  P
Sbjct: 554 YCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSP 612



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 184/444 (41%), Gaps = 31/444 (6%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++ ++V+++ EM + G+ L+      +I +      ++ A ++F  M    ++PD  +Y+
Sbjct: 173 KLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYK 232

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            ++   C   R+ D +  L+DMI  G        VD       +  F E         G+
Sbjct: 233 LMVVGYCRMGRISDVDRWLKDMIERGYA------VDNATCTLMISTFSEK--------GF 278

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
           V            N   ++  K +   +    I    +++  I  LC+   I++A+E+L 
Sbjct: 279 V------------NRAFWYFKKWVQMGLNPNLI----NFSSLINGLCKIGSIKQAFEMLE 322

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQV 490
            MV     P+  T++A + G CK    E A R+F + V + +   +  +Y+ ++ G C+ 
Sbjct: 323 EMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKE 382

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
           EK+  A  +   M + G   +++++  LI G C      +A  L  L    G +    TY
Sbjct: 383 EKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTY 442

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+ GL K  R  +   +L + L  G   D   Y ILI     Q   K     F+ M K
Sbjct: 443 NAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFK 502

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            GL PD  T   L+       ++        + V    +     Y  +I G  ++G  S 
Sbjct: 503 VGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISS 562

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A      M   G  PD+ T+G L+
Sbjct: 563 AIKFFHKMRDYGCKPDSITYGALI 586



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 5/292 (1%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A ++   M+  +VVPD  +Y   V+G C++    D  R  + +  +   +D+ + + ++ 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
              +   +  A   F    + G + +  +F+ LI GLC +  + +A  +       G   
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 546 TTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
              T+T ++ GL K    ++A  L + L +   +    +V  Y  +I    ++ KL    
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVR--SDNYKPNVYTYTCMINGYCKEEKLNRAE 389

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
           +    M + GLVP+  T   L+ G             ++ +  +    +   YN +I+GL
Sbjct: 390 MLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGL 449

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSF 714
            K+G   +A  LL   L  G   D  T+ +L+     +  + +  A  S  F
Sbjct: 450 CKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMF 501


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 210/468 (44%), Gaps = 26/468 (5%)

Query: 165 SVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           +V  FN+V+      G +VE +  F         M   G  P+V T N L++   +   +
Sbjct: 198 NVFTFNIVIDFLCKQGELVEARALFV-------RMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E        M K GC  +  T+  +I        ++ + S  GEM  LG+   +   +  
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +   C+E  + EA++LF  MR   +MP+E TY  L++  C+  RLDDA  +L++M+  GL
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370

Query: 339 TPTDDVFVDIVRGLCEVGKF---DESVNFLEDKCGYVTSPHNALLECCCNAGKFF----- 390
            P    +  +V GLC+ GK    D+ ++ +E + G      N LL      G F      
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLME-RAGVKA---NELLYTTLIHGHFMNKNSE 426

Query: 391 LAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +L +M ++ +  D   +   I  LC+ +++ +A  LL +M    + P+   Y+  +
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
               K     +A+ +  ++    L  + ++Y  L++GLC+   I EA+  F  M + G  
Sbjct: 487 DAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLD 546

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            +   +  LI G C +  + KA+ L +     G S     YT ++ G +K    +    +
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            A+M+  G  LD+  Y   I      N +++     + M+  G+ PD+
Sbjct: 607 KAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDK 654



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/664 (20%), Positives = 270/664 (40%), Gaps = 54/664 (8%)

Query: 42  IKSHQTTDYEAKIQSLR--HNLSPDHLIRVLDNTNDLSSALKI---FKWVSIQKRFQHTA 96
           + S   T    +++ LR  H ++PDHL+     ++ L S+  I       +  + F H+ 
Sbjct: 41  VASAVVTPISDRLRVLRSLHAVAPDHLL-----SHPLPSSAHICLAAHLAARARLFAHSR 95

Query: 97  DTYCKMI---LKLGLAGNVEEM---EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
               +++    +  LA ++ ++     L     +   P+V + L+SL+    +H  ++ A
Sbjct: 96  RLLSRLLGAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLL---ADHGLLDDA 152

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           +R L  +       +    N +L  +   ++G      + + + +    PNV T N +++
Sbjct: 153 VRALARVRQLRVPPNTRTCNHILLRLARNRQGG-----LVRRLFEHLPAPNVFTFNIVID 207

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
            L +   +  A   F RM   GC P+  T+  +I G      +++   ++ EM   G   
Sbjct: 208 FLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAA 267

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           ++  Y  +I    +   +E+A   F  M+ L +M + +T    ++  C+   + +A  + 
Sbjct: 268 DVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLF 327

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
             M V G+ P +  +  +V G C+ G+ D+++  L++        H  L           
Sbjct: 328 AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV------HQGL----------- 370

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                        + +  ++ + +  LC+  ++  A ++L  M  + V  +   Y+  + 
Sbjct: 371 -------------VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH 417

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G     N E AL +  ++  + + LD   Y  L+ GLC+V+K+ EA  +   M   G   
Sbjct: 418 GHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRP 477

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           ++  +  ++       K  +A+ L      SG      TY  ++ GL K     + +   
Sbjct: 478 NTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF 537

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M   G   +V+ Y  LI    +   L       N MV  G+  D+    SL+ G    
Sbjct: 538 DKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQ 597

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             L    +   K++     LD   Y   I+G     +  +A  +L  M+G G  PD T +
Sbjct: 598 GDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAY 657

Query: 691 GLLV 694
             L+
Sbjct: 658 NCLI 661


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 224/512 (43%), Gaps = 18/512 (3%)

Query: 198 IVPNVDTLNYLLEVLFETNRI--ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           + P++   N +L  L  +     +++LD FR +      PN  TF +++    +   + D
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++S L  M   G+  +   Y  ++   CR+  L EA  L   M+   + P   TY  L++
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----------NFL 365
                  +  A  ++E M   G  P    +  +  GLC+ GK DE+             L
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
            D   Y T   +A  +C C++    L    LE+M ++ + A   + NI I+ LC++ E+ 
Sbjct: 343 PDVVTYNTL-ADACFKCRCSSDALRL----LEEMREKGVKATLVTHNIVIKGLCKDGELE 397

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A   L +M    + PD  TY+  +   CK  N   A  +  ++  + L LD+ + + ++
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL 457

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
             LC+ ++  EA  +     + G      S+  ++         + A+RL         +
Sbjct: 458 YNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLT 517

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
            + STY  ++ GL ++ R K+ +  L +++ +G   D   Y I+I +  ++  L++   F
Sbjct: 518 PSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQF 577

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            N MV+    PD  T  +L++GL    +L          V   + +D   YN LI  + K
Sbjct: 578 HNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCK 637

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +G    A +    M  +G  PDA T+ +++ +
Sbjct: 638 DGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 231/556 (41%), Gaps = 49/556 (8%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           K   AD +     M   G+ P+  T N LL        +  A     RM K G  P   T
Sbjct: 217 KGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPT 276

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++        +  +  ++  M   G + +L  Y  +   LC+  K++EA RL   M 
Sbjct: 277 YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEME 336

Query: 300 ALD-LMPDELTYEELIN----CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            L  L+PD +TY  L +    C C +    DA  +LE+M   G+  T      +++GLC+
Sbjct: 337 RLGTLLPDVVTYNTLADACFKCRCSS----DALRLLEEMREKGVKATLVTHNIVIKGLCK 392

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDS 409
            G+ + ++  L        +P    +N L+   C AG    A  ++++M  R +  D  +
Sbjct: 393 DGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFT 452

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
            N  +  LC+ +   +A  LL        +PD  +Y   +    K  N E ALR++ ++ 
Sbjct: 453 LNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMI 512

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            + L     +Y+ L++GL ++ ++ EA++    + + G     +++NI+I+  C    ++
Sbjct: 513 EKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLE 572

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A +  +    +       T   +M GL    +    L +    + +G  +DV  Y  LI
Sbjct: 573 NAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLI 632

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPD----------------RETMLSLLHGLADGSQL 633
           Q+M +   +     FF  M   GL PD                 E   ++LH LA+   L
Sbjct: 633 QTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTL 692

Query: 634 H-------LVSSGINK------------LVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
                   L  S +++             V + +   S  Y  L+NGL   G   +A  +
Sbjct: 693 SQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAI 752

Query: 675 LDLMLGKGWVPDATTH 690
           LD M+ KG   D++T+
Sbjct: 753 LDEMMQKGMSVDSSTY 768



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 140/623 (22%), Positives = 266/623 (42%), Gaps = 32/623 (5%)

Query: 25  SSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRH----NLSPDH-----LIRVLDNTND 75
            SL  AN + LS+    +    +T  +A + + R      L P+H     L+    +   
Sbjct: 165 PSLQAANAV-LSA----LARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGT 219

Query: 76  LSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           L+ AL     +S  + F  + D  TY  ++      G + E   L   M K+     R  
Sbjct: 220 LADALST---LSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPT 276

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK-E 192
             +LV ++     +  A +V+  M + GF+  +  +NV+   + +   G  D  F  K E
Sbjct: 277 YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQA--GKVDEAFRLKDE 334

Query: 193 MVKAG-IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           M + G ++P+V T N L +  F+      AL     M +KG      T  IVIKGL  + 
Sbjct: 335 MERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDG 394

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            ++ ++  L +M D G+  ++  Y  +I   C+   + +A  L   M    L  D  T  
Sbjct: 395 ELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLN 454

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LED 367
            ++  LC+  R ++A  +L+     G  P +  +  ++    +    + ++      +E 
Sbjct: 455 TVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEK 514

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKA 426
           K     S +N L++     G+   A   L ++ ++  + D  ++NI I   C+  ++  A
Sbjct: 515 KLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENA 574

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           ++   +MV +S  PD  T +  + G C     + AL++F     +   +D I+Y+ L++ 
Sbjct: 575 FQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQT 634

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR-LRSLAYSSGTSY 545
           +C+   +  A+  F  M   G    + ++N+++  L    + ++A   L  LA S   S 
Sbjct: 635 MCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQ 694

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV-EAYCILIQSMSEQNKLKDCALF 604
           + S+       + + +  KD      +  VE       EAY  L+  +    + K+    
Sbjct: 695 SFSSPLLKPSSVDEAESGKD--AKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAI 752

Query: 605 FNVMVKAGLVPDRETMLSLLHGL 627
            + M++ G+  D  T ++L+ GL
Sbjct: 753 LDEMMQKGMSVDSSTYITLMEGL 775



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 188/452 (41%), Gaps = 51/452 (11%)

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + ++  F+ + AL L P+  T+  L++  C    L DA   L  M   GL+P    +  +
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 349 VRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRK 403
           +   C  G   E+   L    +D        +N L+      G    A  ++E M A+  
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRM-VVSSVVPDCATYSAFVLG--KCKLCNYED 460
             D  ++N+    LC+  ++ +A+ L   M  + +++PD  TY+       KC+ C+  D
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCR-CS-SD 363

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           ALR+  ++  + +    ++++ +++GLC+  ++  A+     M+ +G +    ++N LI+
Sbjct: 364 ALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIH 423

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
             C    + KA  L       G    T T   ++  L K +R ++   +L      G   
Sbjct: 424 AHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMP 483

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           D  +Y  ++ +  ++   +     ++ M++  L P   T                     
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST--------------------- 522

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
                         YN LI GL + G   +A   L+ ++ KG VPD TT+ +++ +   E
Sbjct: 523 --------------YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKE 568

Query: 701 EIDSRRFAF-----DSSSFPDSVS-DILAEGL 726
                 F F     ++S  PD V+ + L  GL
Sbjct: 569 GDLENAFQFHNKMVENSFKPDVVTCNTLMNGL 600



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 163/364 (44%), Gaps = 10/364 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I     AGN+ +   L   MV+         L +++++     R   A  +L + 
Sbjct: 417 TYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSP 476

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              GF      +  V+ A  +E       + ++ EM++  + P++ T N L++ L    R
Sbjct: 477 PQRGFMPDEVSYGTVMAAYFKEYNS-EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGR 535

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A+D+   + +KG  P+  T+ I+I        ++++     +M +   + ++     
Sbjct: 536 LKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNT 595

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  LC   KL++A++LF+         D +TY  LI  +C++  +D A     DM   G
Sbjct: 596 LMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARG 655

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT-SPHNALLECC----CNAGKFF 390
           L P    +  ++  L E G+ +E+ N L    + G ++ S  + LL+        +GK  
Sbjct: 656 LQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKD- 714

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            AK   E + + + +  +++   +  LC + + ++A  +L  M+   +  D +TY   + 
Sbjct: 715 -AKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLME 773

Query: 451 GKCK 454
           G  K
Sbjct: 774 GLVK 777


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 241/605 (39%), Gaps = 68/605 (11%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   GF  S    N +L  +V+  R F   + V+ +++ +G  P+       ++      
Sbjct: 113 MRKDGFVPSTRSVNRLLRTLVDS-RHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLK 171

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            ++   +  + M K G  P+   + +V+ GL    R+ D+  +  EM    +      Y 
Sbjct: 172 DLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYN 231

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C+   +EEA+   + M+  ++  + +TY  L+N LC + R+DDA ++L +M   
Sbjct: 232 TLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGS 291

Query: 337 GLTPT---------------DDVFVD-------------IVRGLCEVGKFDESVNFLEDK 368
           G  P                DD   D             ++ GLC VG+ +++   L   
Sbjct: 292 GFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKL 351

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                +P    +N L+   C  G    A    E+M +R +  +  ++N  I   CE  E+
Sbjct: 352 VENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEV 411

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A   + RMV   V P   TY++ + G  +  ++        ++    +  + ISY  L
Sbjct: 412 DHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSL 471

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +  LC+  K+ +A  V   M   G S ++  +N+LI   C + K+  A R       SG 
Sbjct: 472 INCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI 531

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC-- 601
             T  TY  ++ GL +  R K    +  QM  +GC  DV  Y  LI   ++    + C  
Sbjct: 532 DATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE 591

Query: 602 --------------------------------ALFFNVMVKAGLVPDRETMLSLLHGLAD 629
                                              F  M++  LVPD+     +++  A+
Sbjct: 592 LYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAE 651

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              +    S   ++V      D   YN LI    ++   S+  +L+D M  KG VP   T
Sbjct: 652 DGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDT 711

Query: 690 HGLLV 694
           + +L+
Sbjct: 712 YNILI 716



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 244/590 (41%), Gaps = 68/590 (11%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
              ++ +M   G   SV  +N+VLG + + +R   D   ++ EM++  +VPN  T N L+
Sbjct: 176 GFELMKSMVKDGMGPSVFAYNLVLGGLCKVRR-IKDARKLFDEMIQRNMVPNTVTYNTLI 234

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-- 267
           +   +   IE AL    RM ++    N  T+  ++ GL  + RVDD+  +L EM   G  
Sbjct: 235 DGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFL 294

Query: 268 --------------------------IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                                     I+++   Y  ++  LCR  ++E+A  +   +   
Sbjct: 295 PGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN 354

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + P +++Y  L+N  C+   +  A    E M   GL P    F  ++   CE G+ D +
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
             ++        SP    +N+L+      G F      L++M    I  +  S+   I  
Sbjct: 415 ETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINC 474

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC++ ++  A  +L  M+   V P+   Y+  +   C L   +DA R F ++    +   
Sbjct: 475 LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDAT 534

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++Y+ L+ GL +  ++ +A ++F  M+  GC+    ++N LI G        K + L  
Sbjct: 535 LVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYD 594

Query: 537 LAYSSGTSYTTSTYTKIML-----GLVKLQR------------------------AKDLL 567
                G   T  T+  ++      G+V + +                        A+D  
Sbjct: 595 KMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGN 654

Query: 568 VVLA-----QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
           V+ A     QM+ +G   D   Y  LI +     ++ +     + M   GLVP  +T   
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           L+ GL D    +       ++V    +L+ SM   LI+GL +EG+  +A 
Sbjct: 715 LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQ 764



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 114/512 (22%), Positives = 214/512 (41%), Gaps = 72/512 (14%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A D +  M K G  P++R+   +++ L+ +   + ++++  ++ D G + +   Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            +        L++   L K M    + P    Y  ++  LC+  R+ DA  + ++MI   
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFL 391
           + P    +  ++ G C+VG  +E++ F E       +C  VT  +N+LL   C +G+   
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVT--YNSLLNGLCGSGRVDD 280

Query: 392 AKCILEKM----------------------ADRKIADCDSWNIPIR-------WLCENEE 422
           A+ +L +M                       D  + D     I  R        LC    
Sbjct: 281 AREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGR 340

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I KA E+L ++V + V P   +Y+  V   C+  + + A+    Q+  + L  + I+++ 
Sbjct: 341 IEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNT 400

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++   C+  ++  A      M + G S +  ++N LI G        +          +G
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 +Y  ++  L K ++  D  +VLA M+  G + + E Y +LI++    +KLKD  
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAF 520

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
            FF+ M+++G+                                D+ ++    YN LINGL
Sbjct: 521 RFFDEMIQSGI--------------------------------DATLV---TYNTLINGL 545

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            + G   +A  L   M GKG  PD  T+  L+
Sbjct: 546 GRNGRVKKAEDLFLQMAGKGCNPDVITYNSLI 577



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/590 (20%), Positives = 232/590 (39%), Gaps = 67/590 (11%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           +  A K+F  + IQ+       TY  +I      G +EE  G  + M ++   NV   L+
Sbjct: 208 IKDARKLFDEM-IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ---NVECNLV 263

Query: 136 ---SLVFSFVNHYRVNGAMRVLVNMNSGGF----------------------------KL 164
              SL+       RV+ A  VL+ M   GF                            ++
Sbjct: 264 TYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRI 323

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
               + ++L  +    R       V  ++V+ G+ P+  + N L+    +   ++ A+  
Sbjct: 324 DERTYCILLNGLCRVGR-IEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILT 382

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             +M ++G  PN  TF  VI        VD + + +  M + G+   +  Y  +I    +
Sbjct: 383 TEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQ 442

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           +            M    + P+ ++Y  LINCLC++ +L DA  +L DMI  G++P  ++
Sbjct: 443 KGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEI 502

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  ++   C + K  ++  F ++    + S  +A L                        
Sbjct: 503 YNMLIEASCSLSKLKDAFRFFDE---MIQSGIDATLV----------------------- 536

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
               ++N  I  L  N  ++KA +L  +M      PD  TY++ + G  K  N +  L +
Sbjct: 537 ----TYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLEL 592

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           + ++    +     ++  L+   C+ E +    ++F  M +         +N +IY    
Sbjct: 593 YDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAE 651

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              V KA+ L       G      TY  ++L  ++ +R  ++  ++  M  +G    V+ 
Sbjct: 652 DGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDT 711

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           Y ILI+ + +         ++  MV+ GL+ +      L+ GL +   L 
Sbjct: 712 YNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLR 761



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 121/283 (42%), Gaps = 10/283 (3%)

Query: 416 WLCE-NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           WLC  ++ + +A +L   M     VP   + +  +       ++E  L VF  V      
Sbjct: 95  WLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTR 154

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            D+++Y K V+    ++ + +  E+   M K+G   S  ++N+++ GLC +R++  A +L
Sbjct: 155 PDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKL 214

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                       T TY  ++ G  K+   ++ L    +M  +    ++  Y  L+  +  
Sbjct: 215 FDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCG 274

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSS 653
             ++ D       M  +G +P        L  + D    H   +G + L    E+ +D  
Sbjct: 275 SGRVDDAREVLLEMEGSGFLPG-----GFLSFVFDD---HSNGAGDDGLFDGKEIRIDER 326

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            Y IL+NGL + G   +A  +L  ++  G  P   ++ +LV +
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNA 369



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 5/264 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREAL 134
           L  A + F  + IQ     T  TY  +I  LG  G V++ E L   M  K   P+V    
Sbjct: 516 LKDAFRFFDEM-IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI-TY 573

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            SL+  +         + +   M   G K +V  F+ ++ A    K G      +++EM+
Sbjct: 574 NSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYAC--RKEGVVTMDKMFQEML 631

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           +  +VP+    N ++    E   +  A+   ++M  +G   +  T+  +I   + + RV 
Sbjct: 632 QMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVS 691

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +   ++ +M   G+  ++  Y  +I  LC       A   ++ M    L+ +     +LI
Sbjct: 692 EIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751

Query: 315 NCLCENLRLDDANDILEDMIVIGL 338
           + L E   L +A  +  ++ + GL
Sbjct: 752 SGLREEGMLREAQIVSSELSIGGL 775


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 214/505 (42%), Gaps = 41/505 (8%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           +RG  D       +V +   P+  T   L++ L  + R   A     R     C P+   
Sbjct: 77  RRGELDEAL---RLVGSARRPDAGTCAALIKKLSASGRTAEA-----RRVLAACGPDVMA 128

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++ G     ++D +  ++ EM    ++ +   Y  +I  LC   +   A+ +   M 
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 185

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
               +PD +TY  L+   C+      A  +L++M   G TP    +  +V G+C+ G+ D
Sbjct: 186 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 245

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
           +++ FL++   Y   P+                                S+NI ++ LC 
Sbjct: 246 DAIEFLKNLPSYGCEPNTV------------------------------SYNIVLKGLCT 275

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            E    A EL+G M      P+  T++  +   C+    E AL V  Q+       +S+S
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+   C+ +K+ +A+     M   GC     S+N L+  LC   +VD A+ L     
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
             G +    +Y  ++ GL K  + K+ L +L +M+ +G   D+  Y  +   +  +++++
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           D    F  +   G+ P+     +++ GL    + H        ++ +  + + S Y ILI
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWV 684
            GL  EGL  +A  LLD +  +G V
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 182/388 (46%), Gaps = 33/388 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+       R   A+ VL  M        V  + ++L A  + + G+   + +  EM  
Sbjct: 163 TLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK-RSGYKQAMKLLDEMRD 221

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P++ T N ++  + +  R++ A++  + +   GC PN+ ++ IV+KGL    R +D
Sbjct: 222 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 281

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++GEM   G    +  +  +I  LCR+  +E A+ + + +      P+ L+Y  L++
Sbjct: 282 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLH 341

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C+  ++D A   L+ M+  G  P      DIV                          
Sbjct: 342 AFCKQKKMDKAMAFLDLMVSRGCYP------DIVS------------------------- 370

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N LL   C +G+  +A  +L ++ D+  A    S+N  I  L +  + ++A ELL  MV
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              + PD  TYS    G C+    EDA+R F +V    +  +++ Y+ ++ GLC+  +  
Sbjct: 431 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 490

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            A+++F  M  NGC  + S++ ILI GL
Sbjct: 491 SAIDLFAYMIGNGCMPNESTYTILIEGL 518



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 193/453 (42%), Gaps = 52/453 (11%)

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           L R  +L+EA+RL    R     PD  T   LI  L  + R  +A  +L         P 
Sbjct: 75  LVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPD 125

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  +V G C  G+ D +   + +       P    +N L+   C  G+   A  +L+
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAE---MPVEPDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 398 KMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M  R+ + D  ++ I +   C+    ++A +LL  M      PD  TY+  V G C+  
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK------------------------ 492
             +DA+   + + +     +++SY+ +++GLC  E+                        
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302

Query: 493 -----------ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
                      +  A+EV   + K GC+ +S S+N L++  C  +K+DKA+    L  S 
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      +Y  ++  L +       + +L Q+  +GCA  + +Y  +I  +++  K K+ 
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 422

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
               N MV  GL PD  T  ++  GL    ++        K+       ++ +YN +I G
Sbjct: 423 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 482

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L K   T  A  L   M+G G +P+ +T+ +L+
Sbjct: 483 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 161/381 (42%), Gaps = 46/381 (12%)

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           D +R L   G+ DE++  +            AL++    +G+   A+ +L         D
Sbjct: 70  DRLRSLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG----PD 125

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  +   C   ++  A  L+  M V    PD  TY+  + G C      +AL V  
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++  +  V D ++Y+ L+E  C+     +A+++   M   GC+    ++N+++ G+C   
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD--------------------- 565
           +VD AI       S G    T +Y  ++ GL   +R +D                     
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302

Query: 566 --------------LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
                          L VL Q+   GC  +  +Y  L+ +  +Q K+     F ++MV  
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD--SEVLDSSMYNILINGLWKEGLTS 669
           G  PD  +  +LL  L    ++ +    +++L     + VL S  YN +I+GL K G T 
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS--YNTVIDGLTKAGKTK 420

Query: 670 QASYLLDLMLGKGWVPDATTH 690
           +A  LL+ M+ KG  PD  T+
Sbjct: 421 EALELLNEMVSKGLQPDIITY 441



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 4/243 (1%)

Query: 128 PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           PNV     +++ SF+     V  A+ VL  +   G   +   +N +L A  ++K+     
Sbjct: 296 PNV--VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 353

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            F+   MV  G  P++ + N LL  L  +  ++ A++   ++  KGC P   ++  VI G
Sbjct: 354 AFL-DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 412

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    +  +++ +L EM   G+Q ++  Y+ I   LCRE+++E+AIR F  ++ + + P+
Sbjct: 413 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 472

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            + Y  +I  LC+      A D+   MI  G  P +  +  ++ GL   G   E+ + L+
Sbjct: 473 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 532

Query: 367 DKC 369
           + C
Sbjct: 533 ELC 535



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 3/204 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF-VFVYKEMV 194
            L+ +F    +++ AM  L  M S G    +  +N +L A+   + G  D  V +  ++ 
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC--RSGEVDVAVELLHQLK 395

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G  P + + N +++ L +  + + AL+    M  KG  P+  T+  +  GL    R++
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D++   G++ D+GI+     Y  II  LC+  +   AI LF  M     MP+E TY  LI
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 315 NCLCENLRLDDANDILEDMIVIGL 338
             L     + +A D+L+++   G+
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGV 539


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 195/421 (46%), Gaps = 8/421 (1%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G  + +  +  ++  + + K+   + V + +++   G  P + T N LL  L +  R
Sbjct: 26  TTNGCTIDIHTYTTIVDWLAKNKK-IQEAVALMEKITANGCTPTIATYNALLNGLCKMGR 84

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +E A+D  R++   GC P+  T+  +I GL    R  ++  +  EM   G+ L+   YT 
Sbjct: 85  LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTA 144

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  L +  K+ +A  ++K M +   +PD +T   +I+ LC+  R+  A  I + M   G
Sbjct: 145 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 204

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDK----CGYVTSPHNALLECCCNAGKFFLAK 393
           L P + V+  ++ GLC+  K D ++  L       C   T  +N L++  C +G    A+
Sbjct: 205 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAAR 264

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              ++M +     D  ++NI I   C+      A  +   M  S   P+  TY   + G 
Sbjct: 265 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGL 324

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK      A   ++ +  +    DS  YS LV+GLC+  K+     +F  M ++G + +S
Sbjct: 325 CKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NS 383

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +   LI+ LC   +VD+A+ L +     G  +  + Y  I+  L+K  +  +   V  +
Sbjct: 384 QTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA-YNSIISALIKSGKVNEGQAVYQE 442

Query: 573 M 573
           M
Sbjct: 443 M 443



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 197/426 (46%), Gaps = 13/426 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +E    G   ++ T   +++ L +  +I+ A+    ++   GC P   T+  ++ GL   
Sbjct: 23  QETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 82

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R+++++ +L ++ D G   ++  YT +I  L ++ +  EA +LFK M +  L  D + Y
Sbjct: 83  GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCY 142

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI  L +  ++  A+ + + M   G  P       ++ GLC+ G+   +V   +    
Sbjct: 143 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 202

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEE 422
              +P    ++AL+   C A K     C LE +A  K A C     ++NI I  LC++ +
Sbjct: 203 RGLAPNEVVYSALIHGLCKARKM---DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 259

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A      M+ +   PD  TY+  + G CK  N + A  VF  +S+     + ++Y  
Sbjct: 260 VAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGT 319

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ GLC+  ++T+A   +  M + GC   S  ++ L+ GLC   K++    L      SG
Sbjct: 320 LISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 379

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +  + T T+++  L K  R  + + +   +  EG      AY  +I ++ +  K+ +  
Sbjct: 380 VA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNEGQ 437

Query: 603 LFFNVM 608
             +  M
Sbjct: 438 AVYQEM 443



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 197/445 (44%), Gaps = 7/445 (1%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TF I+I GL+    +  + S+  E    G  +++  YT I+  L +  K++EA+ L + +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
            A    P   TY  L+N LC+  RL++A D+L  ++  G TP    +  ++ GL +  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 359 DESVNFLEDKC----GYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIP 413
            E+    ++         T  + AL+     AGK   A  + + M  +  + D  + +  
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC+   I  A  +   M    + P+   YSA + G CK    + AL +  Q+     
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D+I+Y+ L++GLC+   +  A   F  M + GC     ++NILI G C     D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +     SS  S    TY  ++ GL K ++     +    M   GC  D   Y  L+  + 
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           +  KL+   + F+ M ++G V + +T   L+  L   +++    S  N +  +  +    
Sbjct: 361 KSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPY 418

Query: 654 MYNILINGLWKEGLTSQASYLLDLM 678
            YN +I+ L K G  ++   +   M
Sbjct: 419 AYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 171/394 (43%), Gaps = 41/394 (10%)

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D  TY  +++ L +N ++ +A  ++E +   G TPT   +  ++ GLC++G+ +E+++ L
Sbjct: 33  DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 92

Query: 366 ----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
               ++ C      + +L++      + F A  + ++MA R +A D   +   IR L + 
Sbjct: 93  RKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQA 152

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            +I +A  +   M     VPD  T S  + G CK      A+R+F+ + A+ L  + + Y
Sbjct: 153 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           S L+ GLC+  K+  A+E+   M K  C+  + ++NILI GLC    V  A         
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           +G      TY  ++ G  K         V   M    C+ +V  Y  LI  + ++ +L  
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
            +L++  M + G  PD                                   S +Y+ L++
Sbjct: 333 ASLYYQHMKERGCPPD-----------------------------------SFVYSSLVD 357

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL K G       L D M   G V ++ T   L+
Sbjct: 358 GLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLI 390



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 30/386 (7%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           T+  LIN L +   L  A+ + ++    G T     +  IV  L +  K  E+V  +E  
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                +P  A                              ++N  +  LC+   + +A +
Sbjct: 61  TANGCTPTIA------------------------------TYNALLNGLCKMGRLEEAID 90

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL ++V +   PD  TY++ + G  K     +A ++F++++++ L LD++ Y+ L+ GL 
Sbjct: 91  LLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL 150

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           Q  KI +A  V+  M+  GC     + + +I GLC   ++  A+R+     + G +    
Sbjct: 151 QAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEV 210

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y+ ++ GL K ++    L +LAQM    C  D   Y ILI  + +   +     FF+ M
Sbjct: 211 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEM 270

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           ++AG  PD  T   L+ G              + + S     +   Y  LI+GL K    
Sbjct: 271 LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQL 330

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV 694
           ++AS     M  +G  PD+  +  LV
Sbjct: 331 TKASLYYQHMKERGCPPDSFVYSSLV 356


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 152/667 (22%), Positives = 264/667 (39%), Gaps = 96/667 (14%)

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN-------- 111
            ++P+   RVL    D   A   F+W   +  FQH A T C ++L   +           
Sbjct: 40  TVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYT-CAVLLNAFVKAKRHEEAHRL 98

Query: 112 -VEEMEGLCQNMVKERYPNVREALISLVFS-FVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
             EE+E LC       +PN  E + + V + F    +V+ A  +L  M   G K+ V + 
Sbjct: 99  LKEELEPLC-------FPN--EIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLH 149

Query: 170 NVVLGAIVEEKR---GFADF----------VFVYKEMVKA-------------------- 196
           + ++  +  + R       F          V  Y  +V                      
Sbjct: 150 STLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKR 209

Query: 197 -----GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
                G  P+V + + +++ L +  R++ A + F+RM   GC PN  T+  +I GL    
Sbjct: 210 YEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVD 269

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R  + + +L  M + G  + +  +  ++  L + ++ E+A + F+ +      P+ +TY 
Sbjct: 270 RPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYN 329

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
             ++ LC+  R+D+A  IL +M+   +TP    +  I+ G C+ G+ D++ +       +
Sbjct: 330 VAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVH 389

Query: 372 VTSPHN----ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKA 426
              PH      LL       K   A  + E M +   I    ++N+ +  +C  + +  A
Sbjct: 390 ECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESA 449

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            E+  +M      PDC TY+  +   C+    ++A      + A ++V +      LVE 
Sbjct: 450 LEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEV 509

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI--------------------------- 519
           LC+  ++ EA  V   + + GC     +F IL+                           
Sbjct: 510 LCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAAT 569

Query: 520 YGLCVMR-----KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           Y LCV       K D+A+ +       G      TY  ++  L  L R +  +    +M 
Sbjct: 570 YSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMA 629

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD-GSQL 633
             GCA  +  Y +LI      +   +    F  MV AG  P  +TM +L   L D G Q 
Sbjct: 630 SRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 689

Query: 634 HLVSSGI 640
            LV   I
Sbjct: 690 LLVRQRI 696



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 229/511 (44%), Gaps = 14/511 (2%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K G   N  T   LL    +  R E A    +   +  C PN   +  VI G     +VD
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +  +L EM + G+++++  ++ +I  LCR+ +++EA+  FK M   +  P+ +TY  ++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVV 187

Query: 315 NCLCENLRLDDANDILEDM-----IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           N LC+  R+D+A ++ +DM        G  P    +  ++  LC+  + D++  + +   
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
               +P    +++L++  C   +      +L  M ++    +   +N  +  L +N+E  
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           KA +   R++ S   P+  TY+  V G CK    ++A R+  ++    +  D I+YS ++
Sbjct: 308 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSII 367

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +G C+  ++ +A +VF  M  + C     +F  L++G    +K  +A R+     ++G  
Sbjct: 368 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 427

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  +M  +      +  L +  +M  +    D   Y  LIQ +    ++ +   F
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            +VM    +VP+     +L+  L    ++    S ++ +V          + IL+  L+ 
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
                 AS LL      G+V DA T+ L V 
Sbjct: 548 RKKWEAASKLLR---SPGFVADAATYSLCVA 575



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 207/467 (44%), Gaps = 18/467 (3%)

Query: 275 YTCIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           YTC + +    +  + EEA RL K        P+E+ Y  +IN  C+  ++D A ++L++
Sbjct: 77  YTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDE 136

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---DKCGYVTSPHNALLECCCNAGKF 389
           M   G+     +   +++GLC  G+ DE++   +   ++C      +N ++   C A + 
Sbjct: 137 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRI 196

Query: 390 FLAKCILEKMADRKIA------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             A  + + M  R  A      D  S++  I  LC+ + + KAYE   RM      P+  
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TYS+ + G CK+    + L +   +  +   ++ I ++ ++  L + ++  +A + F  +
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            K+G   +  ++N+ ++GLC   +VD+A R+      S  +    TY+ I+ G  K  R 
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
                V  +M+V  C      +  L+   SE  K ++       MV AG +P  +T   L
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  +     +       +K+       D + Y  LI  L +     +A   LD+M     
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNV 496

Query: 684 VPD-ATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGNT 729
           VP+ A  H L+       E+D      ++ S  D+V ++  + LG T
Sbjct: 497 VPNGAICHALVEVLCKQGEVD------EACSVLDNVVEVGCQPLGET 537


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 238/542 (43%), Gaps = 22/542 (4%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           +S  H+++VL   +D+ S+L+ FK +S    F+HT  TY  MI KLG    ++ +  L Q
Sbjct: 39  VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQ 98

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M  E  P  +E    ++  +         +++   +   G + SV ++N+VL A++ + 
Sbjct: 99  QMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQN 158

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
             F     +Y  M   G+ PNV T N LL+ L +  +++ A      M  KGC P+  ++
Sbjct: 159 L-FKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSY 217

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLE--LSFYTCIIPMLCRENKLEEAIRLFKMM 298
             VI  +     VD +        +L ++ E  +  Y  +I  +C+E + +EA  L   M
Sbjct: 218 TTVISSMCKLGDVDKAR-------ELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEM 270

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               + P+ ++Y  +I+CL +   ++ +  +   M V G  P    F  +++G    G+ 
Sbjct: 271 VDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRV 330

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
            ++V           SP    +N L+   C+ G    A  +  +M    I  +  +++  
Sbjct: 331 GDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTI 390

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I    ++ ++  A E   +M+     P+   Y+  V   C++  ++ A  +   + +   
Sbjct: 391 IYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGC 450

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
               I+++  ++GLC+  ++  A+ V   M K  C  +  ++N L+ GL       +A  
Sbjct: 451 PPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACG 510

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD-------VEAYC 586
           L          +   TY  IM G       + +L +L +MLV G  LD       V AYC
Sbjct: 511 LIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYC 570

Query: 587 IL 588
            L
Sbjct: 571 KL 572



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 190/402 (47%), Gaps = 42/402 (10%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           F+  V V+N ++  + +E R F +   +  EMV  G+ PNV + + ++  L +   +E +
Sbjct: 240 FEPVVPVYNALIHGVCKECR-FKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELS 298

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           L  F RM  +GC PN +TF  +IKG     RV D+V +   M   G+   +  Y  +I  
Sbjct: 299 LAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHG 358

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTY--------------------EELINC----- 316
           LC +  ++EAI ++  M    + P+  TY                     ++INC     
Sbjct: 359 LCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPN 418

Query: 317 ----------LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
                     LC+    D A D++++MI  G  PT   F + ++GLC  G+ + ++N L+
Sbjct: 419 VVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLD 478

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENE 421
               Y   P    +N LL+    A  F  A  ++ ++ +RK+  DC ++N  +     N 
Sbjct: 479 QMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNG 538

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS-LVLDSISY 480
             ++  +LLG+M+V+ +  D  T +  V   CKL   + A++V   +SA+     D I++
Sbjct: 539 MHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITH 598

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           + ++ G+C      EAV     M K G   + +++N+L+ G 
Sbjct: 599 TIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/544 (20%), Positives = 231/544 (42%), Gaps = 14/544 (2%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP-NVDTLNYLLEVLFETN 216
           NSG FK +   +  ++  +        D V    + +K   VP + +   ++++    +N
Sbjct: 66  NSGTFKHTHLTYETMIDKLGRNNE--MDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSN 123

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             E  L  F R+ + GC P+ + + +V+  L++ +      ++   M   G++  +  Y 
Sbjct: 124 LGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYN 183

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC+  K++ A +L   M      PD+++Y  +I+ +C+   +D A ++      +
Sbjct: 184 VLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL-----AM 238

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
              P   V+  ++ G+C+  +F E+ + + +       P    ++ ++ C  + G   L+
Sbjct: 239 KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELS 298

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +  +M  R    +  ++   I+       +  A  L   M+   V P+   Y+  + G
Sbjct: 299 LAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHG 358

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C   N ++A+ V+ Q+   S+  +  +YS ++ G  +   +  A E +  M   GC  +
Sbjct: 359 LCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPN 418

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              +  ++  LC M   D+A  L     S G   T  T+   + GL +  R +  + VL 
Sbjct: 419 VVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLD 478

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           QM    C  ++  Y  L+  +   N  ++       + +  +  D  T  ++++G +   
Sbjct: 479 QMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNG 538

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD-LMLGKGWVPDATTH 690
               V   + K++ +   LD+   N  +N   K G    A  +LD +   K +  D  TH
Sbjct: 539 MHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITH 598

Query: 691 GLLV 694
            +++
Sbjct: 599 TIIL 602



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/520 (21%), Positives = 208/520 (40%), Gaps = 47/520 (9%)

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSR-TFEIVIKGLIANSRVDDSVSILGEMFD 265
           ++++VL + + I S+L+ F+ +   G   ++  T+E +I  L  N+ +D    +L +M  
Sbjct: 43  HVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKL 102

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             +      +  +I    R N  E+ +++F  +R     P    Y  +++ L        
Sbjct: 103 ENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKM 162

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
            N +  +M   GL P    +  +++ LC+ GK D +   L +       P +        
Sbjct: 163 INALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDV------- 215

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                                  S+   I  +C+  ++ KA EL   M    VVP    Y
Sbjct: 216 -----------------------SYTTVISSMCKLGDVDKAREL--AMKFEPVVP---VY 247

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +A + G CK C +++A  +  ++  + +  + ISYS ++  L  +  +  ++ VF  M  
Sbjct: 248 NALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFV 307

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            GC  +  +F  LI G  V  +V  A+ L +L    G S     Y  ++ GL       +
Sbjct: 308 RGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDE 367

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            + V  QM  +    +V  Y  +I   ++   L      +N M+  G  P+      ++ 
Sbjct: 368 AISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVD 427

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            L   S        I+ ++SD        +N  I GL + G    A  +LD M     +P
Sbjct: 428 VLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLP 487

Query: 686 DATTH-----GLLVGSSVGE------EIDSRRFAFDSSSF 714
           +  T+     GL   ++  E      E++ R+  FD  ++
Sbjct: 488 NIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTY 527


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/476 (23%), Positives = 207/476 (43%), Gaps = 40/476 (8%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   G+ P++ T N L         I  A    +RM   G  P+  T+ I+I G     
Sbjct: 330 DMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMG 389

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            +++S  +  +M   G++L +  YT ++  LC+  +++EA+ L   M  + L PD LTY 
Sbjct: 390 NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS 449

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC-- 369
            LI+ LC+   +++A ++ E+M    + P   V   I+ GL E G   E+  + +     
Sbjct: 450 VLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS 509

Query: 370 --------------GYVT-------------------SP----HNALLECCCNAGKFFLA 392
                         GY                     SP     N+L+   C  GK   A
Sbjct: 510 DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEA 569

Query: 393 KCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L+ +    +     ++   +   CE  ++   +++L  M   ++ P   TY+  V G
Sbjct: 570 VKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKG 629

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK     +++++ + + A+ L  D I+Y+ +++  C+   + +A ++   M ++    S
Sbjct: 630 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 689

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             ++N+LI GLCV   +  A RL           T   YT I+         ++ LV   
Sbjct: 690 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 749

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           QM+  G  + +  Y  +I  + ++N + D   FF +M+  G+ PD++  L +L+  
Sbjct: 750 QMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAF 805



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 148/638 (23%), Positives = 275/638 (43%), Gaps = 48/638 (7%)

Query: 70  LDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER--- 126
           +DN++   SAL +F  +  +  F+H+  ++  +   +   G  +E+  +   MV+E    
Sbjct: 92  VDNSD---SALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSG 148

Query: 127 -YPNVREALIS--------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
             P++ E L +              L  ++     V+ A+ VL  M     ++S+  +N 
Sbjct: 149 SAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNS 208

Query: 172 VLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           +L  +        D ++ VY E+  +G+  N  T   L++ L   +R++ A+   R    
Sbjct: 209 LLYNLRH-----TDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGG 263

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           +   P+  +F  ++ G      VD + S    M   G+  ++  Y  ++  LC    +EE
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEE 323

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+     M    + PD +TY  L N       +  A  +++ M++ GL P    +  ++ 
Sbjct: 324 ALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILIC 383

Query: 351 GLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           G C++G  +ES    E       K   VT  +  LL   C +G+   A  +L +M    +
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVT--YTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++++ I  LC+   + +A EL   M    + P+    SA + G  +     +A  
Sbjct: 442 KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            F  V+   +  + I Y+ +++G  ++  I EAV  +  + + G S +  +FN LIYG C
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              K+ +A++L       G   T+ TYT +M G  +      +  +L +M  +       
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL------HGLADGSQLHLVS 637
            Y ++++ + ++ +L +       M   GL PD+ T  +++      H L    QLH   
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLH--- 678

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
              N+++  S       YN+LINGL   G    A  LL
Sbjct: 679 ---NQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 713



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 133/600 (22%), Positives = 247/600 (41%), Gaps = 52/600 (8%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDT 204
           R+  A+  L       F  SV  FN ++      K G  D     +  M+K G++P+V +
Sbjct: 250 RLQDAVTFLRETGGEEFGPSVVSFNALMSGFC--KMGSVDVAKSFFCMMIKYGLLPDVYS 307

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N LL  L     +E AL+    M   G  P+  T+ I+  G      +  +  ++  M 
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G+  +L  YT +I   C+   +EE+ +L + M +  L    +TY  L++ LC++ R+D
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALL 380
           +A  +L +M VIGL P    +  ++ GLC+ G  +E++   E+ C     P++    A++
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAII 487

Query: 381 ECCCNAGKFFLAKCILEKMADRKIAD-CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                 G    A+   + +    +A+    +NI I    +   I +A     +++   + 
Sbjct: 488 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 547

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P   T+++ + G CK     +A+++   +    LV  S++Y+ L+ G C+   +    ++
Sbjct: 548 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 607

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M       +  ++ +++ GLC   ++ ++++L    Y+ G      TY  ++    K
Sbjct: 608 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 667

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC---------------ALF 604
               +    +  QML          Y +LI  +     LKD                 + 
Sbjct: 668 AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVA 727

Query: 605 FNVMVKAGLVP-DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
           +  ++KA     D +  L   H         +V  G    + D        Y+ +IN L 
Sbjct: 728 YTTIIKAHCAKGDVQNALVFFH--------QMVERGFEVSIRD--------YSAVINRLC 771

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILA 723
           K  L + A +   +ML  G  PD     +++             AF  S  P+SV +I A
Sbjct: 772 KRNLITDAKFFFCMMLTHGIPPDQDICLVMLN------------AFHRSGDPNSVFEIFA 819



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/484 (22%), Positives = 212/484 (43%), Gaps = 43/484 (8%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V D++ +L +M  L +Q+ ++ Y  ++  L   + + +   ++  ++A  +  +E T   
Sbjct: 184 VHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNEYTNPI 240

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ LC   RL DA   L +       P+   F  ++ G C++G  D + +F      Y 
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    +N LL   C AG    A      M +  +  D  ++NI          I  A+
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +++ RM+++ + PD  TY+  + G C++ N E++ ++  ++ +Q L L  ++Y+ L+  L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL------------- 534
           C+  +I EAV +   M   G      ++++LI+GLC    V++AI L             
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480

Query: 535 -----------RSLAYSSGTSYTTST-----------YTKIMLGLVKLQRAKDLLVVLAQ 572
                         A S    Y  S            Y  ++ G  KL    + +    Q
Sbjct: 481 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 540

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ++ +G +  +  +  LI    ++ KL +     + +   GLVP   T  +L++G  +   
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           +H +   ++++ + +       Y +++ GL KEG   ++  LL  M  +G  PD  T+  
Sbjct: 601 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 660

Query: 693 LVGS 696
           ++ S
Sbjct: 661 VIQS 664


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 200/440 (45%), Gaps = 9/440 (2%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G VPN++T N +L +  + NR + A   +  M +     +  TF I+I  L    ++ 
Sbjct: 174 EKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLK 233

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +   +G M  LG++  +  Y  II   C   K + A  +F+ M+   L PD  TY   I
Sbjct: 234 KAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFI 293

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYV 372
           + LC+  RL++A+ ++  M+  GL P    +  ++ G C  G  D++  + ++    G +
Sbjct: 294 SGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIM 353

Query: 373 TS--PHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYEL 429
            S   +N  +      G+   A  ++++M ++  + D  + NI I   C   + ++A+ L
Sbjct: 354 ASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGL 413

Query: 430 LGRMVVSSVVPDCATYSA--FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           L  MV   + P   TY++  +VLGK       DAL  F ++  + L+ D I ++ L++G 
Sbjct: 414 LDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL--FSKIQQEGLLPDIIVFNALIDGH 471

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C    I  A ++   M          ++N L+ G C   KV++A +L       G     
Sbjct: 472 CANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDH 531

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +Y  ++ G  K    KD   V  +M+  G    +  Y  LIQ + +  + +        
Sbjct: 532 ISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKE 591

Query: 608 MVKAGLVPDRETMLSLLHGL 627
           MV  G+ PD  T LS++  +
Sbjct: 592 MVSKGITPDDSTYLSIIEAM 611



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 213/468 (45%), Gaps = 6/468 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV ++    + N A+     +   GF  +++  N +L   ++  R    +V +Y EM + 
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV-LYAEMFRM 210

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            I  ++ T N ++ VL +  +++ A +    M   G  PN  T+  +I G     +   +
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             I   M D G++ +   Y   I  LC+E +LEEA  L   M    L+P+ +TY  LI+ 
Sbjct: 271 RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
            C    LD A    ++MI  G+  +   +   +  L   G+  ++ N +++       P 
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLG 431
              HN L+   C  G    A  +L++M  + I     ++   I  L +   +++A  L  
Sbjct: 391 AVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFS 450

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           ++    ++PD   ++A + G C   N + A ++ +++    ++ D I+Y+ L++G C+  
Sbjct: 451 KIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREG 510

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K+ EA ++   M + G      S+N LI G      +  A R+R    ++G   T  TY 
Sbjct: 511 KVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYN 570

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            ++ GL K Q  +    +L +M+ +G   D   Y  +I++M   + L+
Sbjct: 571 ALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/489 (21%), Positives = 206/489 (42%), Gaps = 22/489 (4%)

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
           VL+     + +++  +R+     C N   F+ +    +A  RVD   +++   FDL    
Sbjct: 102 VLYRLPSPKPSINLIQRLILSPTCTNRTIFDELA---LARDRVDAKTTLI---FDL---- 151

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
                  ++   C   K  EA+  F +++    +P+  T  ++++   +  R   A  + 
Sbjct: 152 -------LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNA 386
            +M  + +  +   F  ++  LC+ GK  ++  F+         P    +N ++   C  
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           GKF  A+ I + M D+ +  DC ++N  I  LC+   + +A  L+ +M+   +VP+  TY
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +A + G C   + + A     ++ ++ ++   ++Y+  +  L    ++ +A  +   M +
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G    + + NILI G C      +A  L       G   T  TYT ++  L K  R K+
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
              + +++  EG   D+  +  LI        +         M    ++PD  T  +L+ 
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           G     ++      ++++       D   YN LI+G  K G    A  + D M+  G+ P
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564

Query: 686 DATTHGLLV 694
              T+  L+
Sbjct: 565 TILTYNALI 573



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 184/412 (44%), Gaps = 56/412 (13%)

Query: 344 VFVDIVRGLCEVGKFDESVN--FLEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKM 399
           +F  +VR  CE+ K +E++   +L  + G+V +    N +L       +  +A  +  +M
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
               I +   ++NI I  LC+  +++KA E +G M    V P+  TY+  + G C    +
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           + A  +F+ +  + L  D  +Y+  + GLC+  ++ EA  + C M + G   ++ ++N L
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL------------VKLQRAKDL 566
           I G C    +DKA   R    S G   +  TY   +  L            +K  R K +
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387

Query: 567 LV-----------------------VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           +                        +L +M+ +G    +  Y  LI  + ++N++K+   
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN------KLVSDSEVL-DSSMYN 656
            F+ + + GL+PD    + + + L DG   H  +  I+      K + + +VL D   YN
Sbjct: 448 LFSKIQQEGLLPD----IIVFNALIDG---HCANGNIDRAFQLLKEMDNMKVLPDEITYN 500

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRR 706
            L+ G  +EG   +A  LLD M  +G  PD  ++  L+   S  G+  D+ R
Sbjct: 501 TLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFR 552


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 201/464 (43%), Gaps = 39/464 (8%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN  TF ++I GL    R+ ++V    +M +      L     ++  LC+   +++A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV-IGLTPTDDVFVDIVRGLC 353
           F   R +   P  +T   LIN  CE   LD A ++  +M     L P    +  I++  C
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
           ++ + D++   LE+               CC++                   D  +    
Sbjct: 118 KMDRLDQARQLLEESS-------------CCSS-------------------DVIAITSV 145

Query: 414 IRWLCENEEIRKAYELLGRMV-VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            R  C+ + + +AY+LL  MV   S  PD   ++  + G CK     +A  +   + +  
Sbjct: 146 ARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG 205

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS--SFNILIYGLCVMRKVDK 530
            V ++++Y+ L++G C+   ++EA+++F  +S        +  +FN LI GLC   +++ 
Sbjct: 206 CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEH 265

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A  L     +      T TYT +M GL K  R  ++  V  +ML EGC   V  Y  L+ 
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
           +  +   L+D       MV  G+ PD  T   LL GL +  ++   +    K++ +    
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            + +Y+ L+ G  K  L  +A      ML +   PD  T  LLV
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 196/467 (41%), Gaps = 90/467 (19%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PN  T + L+  L +  R+  A++ + +M ++ C PN R   +++  L     +D +++I
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 260 LGEMFDLGIQLELSFYT--CIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINC 316
                  GIQ   S  T   +I   C    L++A+ LF +M +   L+P+  TY  +I C
Sbjct: 61  FR-----GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 317 LCENLRLDDANDILEDMI-----VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            C+  RLD A  +LE+       VI +T        + RG C+  + DE+   L D    
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAIT-------SVARGFCKAQRVDEAYQLLLD---- 164

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRKAYEL 429
                                      M ++K A  D  +WN+ I   C+   +R+AYE+
Sbjct: 165 ---------------------------MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEM 197

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR----------------------- 466
           L  +V    VP+  TY+  + G CK  N  +AL++F+                       
Sbjct: 198 LETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGL 257

Query: 467 --------------QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                         Q+ A+ L  D+ +Y+ L++GLC+  + +E   VF  M + GC+ S 
Sbjct: 258 CKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSV 317

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++  L++  C    +  A ++     + G     +TYT ++ GL +  + +       +
Sbjct: 318 VTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEK 377

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           +L E C      Y  L++   +   + +   ++  M+   L PD  T
Sbjct: 378 ILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/438 (20%), Positives = 176/438 (40%), Gaps = 81/438 (18%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F+V++  + +  R   + V  Y +M++   VPN+  +N LL  L +   ++ A+  FR +
Sbjct: 6   FSVLIAGLCKAGR-LGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI 64

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENK 287
               C P+  T  I+I G      +D ++ +  EM  +  +  E + YT II   C+ ++
Sbjct: 65  Q---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 288 LEEAIRLFK----------------------------------MMRALDLMPDELTYEEL 313
           L++A +L +                                  M+      PD + +  +
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGY 371
           I+  C+  R+ +A ++LE ++ +G  P    +  ++ G C+ G   E++   +      +
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
              P+    NAL+   C A +   A  ++++M  R + AD  ++   +  LC+     + 
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD---------- 476
             +   M+     P   TY+  V   CK  + +DA +V R + A+ +  D          
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361

Query: 477 -------------------------SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
                                    ++ YS LV G C+   + EAV+ +  M     +  
Sbjct: 362 LFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPD 421

Query: 512 SSSFNILIYGLCVMRKVD 529
            ++  +L+  LC   + D
Sbjct: 422 PATCKLLVEMLCKRGRTD 439



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 6/219 (2%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTAD---TYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
            + +LS AL++FK +S   R  H      T+  +I  L  A  +E    L + M      
Sbjct: 222 KSGNLSEALQLFKVLS--SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLR 279

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
                  +L+       R +   RV   M   G   SV  +  ++ A  +      D   
Sbjct: 280 ADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG-SLQDAQQ 338

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V + MV  GI P+V T   LLE LFE  ++ +A + F ++ ++ C P +  +  +++G  
Sbjct: 339 VIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCC 398

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
             + VD++V    EM D  +  + +    ++ MLC+  +
Sbjct: 399 KAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 1/195 (0%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V  FN ++  + +  R    F  V K+M    +  +  T   L++ L +  R       
Sbjct: 246 NVVTFNALISGLCKADRLEHAFELV-KQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F  M ++GC P+  T+  ++        + D+  ++  M   GI  +++ YT ++  L  
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             K+  A   F+ +      P  + Y  L+   C+   +D+A     +M+   L P    
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424

Query: 345 FVDIVRGLCEVGKFD 359
              +V  LC+ G+ D
Sbjct: 425 CKLLVEMLCKRGRTD 439


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 215/470 (45%), Gaps = 31/470 (6%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT ++  LC   +  EA+ L + M+A  +  D +TY  LI  LC+   LD A ++L++M 
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC 185

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFF 390
             G+ P   V+  ++RG C  G++ +     ED       P       L++  C  GK  
Sbjct: 186 GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTG 245

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  + + M  R +  +  ++N+ I  LC+   +R+A  L   M    V PD  TY+  +
Sbjct: 246 KAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLI 305

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVL--DSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            G   +   ++A+    ++     V+  D ++++ ++ GLC++ ++T+AV+V   M++ G
Sbjct: 306 AGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERG 365

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL---QRAK 564
           C  +  ++N LI G   + KV  A+ L      SG    + TY+ ++ G  K+    RA+
Sbjct: 366 CMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAE 425

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK-AGLVPDRETMLSL 623
             L  + Q    G   ++  Y  L+ +M +Q  ++     FN M K  GL  D     ++
Sbjct: 426 KFLCTMRQ---RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTM 480

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +HG      +  V   I  ++ +    D+  Y++LIN   K G   +A  +L  M   G+
Sbjct: 481 IHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGF 540

Query: 684 VPDATTHGLLVGSSVGE-----------EIDSRRFAFDSSSFPDSVSDIL 722
           VPD      L+     E           E+ ++  AFD    P  +S I+
Sbjct: 541 VPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFD----PKIISTII 586



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 129/550 (23%), Positives = 239/550 (43%), Gaps = 57/550 (10%)

Query: 128 PNVREA------LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLS----VDVFNVVLGAIV 177
           P+VR+A      L +L     +H R   A  +LV+M+      +    V    V+ G   
Sbjct: 78  PDVRDAVSYNTVLAALCRRGGDHLR--QARSLLVDMSREAHPAARPNAVSYTTVMRGLCA 135

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
             + G A  V + + M  +G+  +V T   L+  L + + +++AL+    M   G  PN 
Sbjct: 136 SRRTGEA--VALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNV 193

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             +  +++G   + R  D   +  +M   GI+ ++  +T +I  LC+E K  +A ++  M
Sbjct: 194 VVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDM 253

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M    L P+ +TY  LIN LC+   + +A  + ++M   G+ P    +  ++ GL  V +
Sbjct: 254 MVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLE 313

Query: 358 FDESVNFLED--KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK-IADCDSW 410
            DE+++FLE+  +   V  P     N+++   C  G+   A  + E MA+R  + +  ++
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I       +++ A  L+  + +S + PD  TYS  + G  K+   + A +    +  
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + +  +   Y  L+  +CQ   +  A+ +F  M KN C L + +++ +I+G C       
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGAC------- 485

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
                     SG   T                      ++  ML EG A D   Y +LI 
Sbjct: 486 ---------KSGDMKTVKQ-------------------LIQDMLDEGLAPDAVTYSMLIN 517

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
             ++   L++       M  +G VPD     SL+ G +   Q   V   I+++ + +   
Sbjct: 518 MYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAF 577

Query: 651 DSSMYNILIN 660
           D  + + +I 
Sbjct: 578 DPKIISTIIR 587



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 3/298 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+   +R LC +    +A  LL  M  S V  D  TY   + G C     + AL +  ++
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               +  + + YS L+ G C+  +  +  +VF  MS+ G       F  LI  LC   K 
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
            KA +++ +    G      TY  ++  L K    ++ L +  +M  +G A DV  Y  L
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTL 304

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLV--PDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           I  +S   ++ +   F   M++   V  PD  T  S++HGL    ++         +   
Sbjct: 305 IAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAER 364

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEID 703
             + +   YN LI G  +      A  L+D +   G  PD+ T+ +L+ G S   E+D
Sbjct: 365 GCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVD 422


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/529 (23%), Positives = 233/529 (44%), Gaps = 26/529 (4%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  +++ G+ P+V + N L++   +   ++ A D F +M ++G  PN  T+  +I GL 
Sbjct: 140 VFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLC 199

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +D +  +L +M   G++     Y C+I         +E++R+FK M +  L+PD  
Sbjct: 200 KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVG 259

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG---KFDESVNFL 365
                +  LC++ R+ +A DI + M++ G  P    +  ++ G    G     D   N +
Sbjct: 260 NCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVM 319

Query: 366 EDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
             + G V   H  N L+      G    +  + E M  + +  D  +++  I   C    
Sbjct: 320 VCE-GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGR 378

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS--- 479
           +  A E    M+ + V PD A YS  + G+   CN  D       V A+ L+ D +S   
Sbjct: 379 LDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ---CNRRDL------VKAKELISDMLSKGI 429

Query: 480 -------YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
                  ++ ++  LC+  ++ E  +V   +   G   +  +FN L+ G C++  + +A+
Sbjct: 430 PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAV 489

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L     S G      TY  ++ G  K  R  D L +   ML +   L   +Y I++  +
Sbjct: 490 GLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 549

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +  +       F+ M+++G+     T  ++L GL   +     +  + KL S +   D 
Sbjct: 550 FQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 609

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             +NI+I  ++K G   +A  L   +   G VP   T+ +++ + + EE
Sbjct: 610 LTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 658



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/547 (21%), Positives = 234/547 (42%), Gaps = 41/547 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +M + GI+PNV T + L+  L +T  ++ A    R+M   G  PN+ T+  +I G  
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI---------------- 292
            +    +SV +  EM    +  ++      +  LC+  +++EA                 
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 293 -------------------RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
                               LF +M    ++PD   +  LIN       +D +  + EDM
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC----CNAGKF 389
              G+ P    F  ++   C +G+ D+++            P  A+  C     CN    
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 414

Query: 390 FLAKCILEKMADRKIAD--CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             AK ++  M  + I       +   I  LC+   + +  +++  ++ +   P+  T+++
Sbjct: 415 VKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNS 474

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            V G C + N ++A+ +   + +  +  D  +Y+ LV+G C+  +I +A+ +F  M    
Sbjct: 475 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 534

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            +L+S S+NI+++GL   R+   A  +      SG + +  TY  ++ GL +     +  
Sbjct: 535 VTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEAN 594

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           ++L ++       D+  + I+I++M +  + ++    F  +   GLVP   T   ++  L
Sbjct: 595 MLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 654

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                     +  + +   S   DS + N +I  L  +G  ++A   L  +  KG +P+A
Sbjct: 655 IKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEA 714

Query: 688 TTHGLLV 694
           TT  LL+
Sbjct: 715 TTTSLLI 721



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 208/485 (42%), Gaps = 9/485 (1%)

Query: 221 ALDQFRRMHKKGC---CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           A++ F+RM +  C    P   T+ I+I       R D  + + G +   G+  ++  Y  
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +E ++++A  LF  M    +MP+ +TY  LIN LC+   +D A  +L  M+  G
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAK 393
           + P +  +  ++ G    G + ESV   ++    +  P     N+ +   C  G+   A+
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278

Query: 394 CILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I + M  +    D  S+   +        I     L   MV   VVPD   ++  +   
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            +L   + +L +F  ++ Q +  D I++S ++   C++ ++ +A+E F  M   G    +
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 398

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT-TSTYTKIMLGLVKLQRAKDLLVVLA 571
           + ++ LI G C  R + KA  L S   S G        +T I+  L K  R  +   V+ 
Sbjct: 399 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 458

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            ++  G   ++  +  L+        +K+     + M   G+ PD  T  +L+ G     
Sbjct: 459 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 518

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           ++    +    ++     L S  YNI+++GL++   T  A  +   M+  G      T+ 
Sbjct: 519 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYA 578

Query: 692 LLVGS 696
            ++G 
Sbjct: 579 TVLGG 583



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/570 (21%), Positives = 240/570 (42%), Gaps = 44/570 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  +I      G V++   L   M ++   PNV     SL+        ++ A RVL  
Sbjct: 155 SYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNV-VTYSSLINGLCKTKEMDKAERVLRQ 213

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G + +   +N ++         + + V V+KEM  + +VP+V   N  +  L +  
Sbjct: 214 MVGAGVRPNNMTYNCLIHGYSTSGM-WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHG 272

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           RI+ A D F  M  KG  P+  ++  ++ G      +    ++   M   G+  +   + 
Sbjct: 273 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 332

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I    R   +++++ +F+ M    + PD +T+  +I+  C   RLDDA +    MI  
Sbjct: 333 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 392

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH-----NALLECCCNAGKFFL 391
           G+ P   V+  +++G C      ++   + D       P       +++   C  G+   
Sbjct: 393 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE 452

Query: 392 AKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            K +++ +    +  +  ++N  +   C    +++A  LL  M    V PD  TY+  V 
Sbjct: 453 GKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVD 512

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    +DAL +FR +  + + L S+SY+ ++ GL Q  +   A E+F  M ++G ++
Sbjct: 513 GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAV 572

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           S  ++  ++ GLC     D+A  L    +S    +   T+  ++  + K+ R ++   + 
Sbjct: 573 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELF 632

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA------------------- 611
           A +   G    +  Y ++I ++ ++   +D    F+ M K+                   
Sbjct: 633 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 692

Query: 612 ----------------GLVPDRETMLSLLH 625
                           G++P+  T   L++
Sbjct: 693 GEVAKAGNYLSKIDKKGILPEATTTSLLIY 722



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 84/414 (20%), Positives = 177/414 (42%), Gaps = 44/414 (10%)

Query: 168 VFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           VFN ++ A    + G  D  + ++++M K G+ P++ T + ++       R++ A+++F 
Sbjct: 330 VFNTLINAYA--RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE-LSFYTCIIPMLCRE 285
            M   G  P++  +  +I+G      +  +  ++ +M   GI    + F+T II  LC+E
Sbjct: 388 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 447

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++ E   +  ++      P+ +T+  L++  C    + +A  +L+ M  +G+ P    +
Sbjct: 448 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 507

Query: 346 VDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             +V G C+ G+ D+++    D    +    +  +N +L     A +  +AK +  +M +
Sbjct: 508 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 567

Query: 402 RKIA------------------------------------DCDSWNIPIRWLCENEEIRK 425
             +A                                    D  ++NI IR + +    ++
Sbjct: 568 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 627

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A EL   +    +VP   TY   +    K  ++EDA  +F  +   S   DS   ++++ 
Sbjct: 628 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 687

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            L    ++ +A      + K G    +++ ++LIY   V  K  + I+L    Y
Sbjct: 688 MLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKY 741


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/548 (22%), Positives = 255/548 (46%), Gaps = 17/548 (3%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A RVL  M   G + +   +N ++         + + V V+K+M   G++P VD  N  +
Sbjct: 279 AERVLEQMVEAGTRPNSITYNSLIHGYSISGM-WNESVRVFKQMSSCGVIPTVDNCNSFI 337

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA--NSRVDDSVSILGEMFDLG 267
             LF+  R   A   F  M  KG  P+  ++  ++ G     +S + D  +I   M   G
Sbjct: 338 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 397

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I      +  +I    R   +++A+ +F+ M+   ++PD +T+  +I+ LC   RLDDA 
Sbjct: 398 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 457

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH-----NALLEC 382
                M+ IG+ P++ V+  +++G C  G+  ++   + +       P      ++++  
Sbjct: 458 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 517

Query: 383 CCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+    K I++ M    +  +  ++N  +   C    + +A+ LL  M    + P+
Sbjct: 518 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 577

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
           C  Y   V G CK    +DAL VFR +  + +   S+ YS ++ GL Q  + T A ++F 
Sbjct: 578 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 637

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M ++G ++S  ++ +++ GLC     D+A  L    ++    +   T+  ++  + K+ 
Sbjct: 638 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 697

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R ++   +   +   G   +++ Y ++I ++ ++   ++    F  + K+G   D   + 
Sbjct: 698 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 757

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL--------TSQASY 673
            ++  L + +++   S+ ++ +  ++  L++S  ++L +   +EG+         + A  
Sbjct: 758 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTAPAPAPA 817

Query: 674 LLDLMLGK 681
           LL+L L +
Sbjct: 818 LLELELSQ 825



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 122/580 (21%), Positives = 234/580 (40%), Gaps = 79/580 (13%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P + T N L++     +R +  L    R+ K G  P+  ++ + I G + +  VD +  +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKAHCL 212

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G+  ++     II  LC+  ++++A  + + M    + PD  TY  +I+ LC+
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPH- 376
           +  +D A  +LE M+  G  P    +  ++ G    G ++ESV   +    CG + +   
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 377 -NALLECCCNAGKFFLAKCILEKM----------------------ADRKIADCDS---- 409
            N+ +      G+   AKCI + M                       D  +AD  +    
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 410 ------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                       +NI I        + KA  +   M    ++PD  T++  +   C++  
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 458 YEDALRVFRQ--------------------------VSAQSLVLDSIS----------YS 481
            +DAL  F                            V A+ L+ + ++          +S
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC+  ++ E  ++   M + G   +  +FN L+ G C++  +++A  L     S 
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  ++ G  K  R  D L V   ML +G       Y I++  + +  +    
Sbjct: 573 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ M+++G      T   +L GL   +     +  + KL + +   D   +NI+I+ 
Sbjct: 633 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 692

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           ++K G   +A  L D +   G VP+  T+ +++ + + EE
Sbjct: 693 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 732


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 226/526 (42%), Gaps = 53/526 (10%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +++ L    D S AL+ F W   +  + HT  +Y  M+  LG   ++        ++ K 
Sbjct: 82  VLQTLGFLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG-FKLSVDVFNVVLGAIVEEKRGFA 184
                   ++ L   F N         ++ N N  G F+ S+ VF +             
Sbjct: 141 S-----RGIVKLEARFFNS--------LMRNFNRAGLFQESIKVFTI------------- 174

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIV 243
                   M   G+ P+V T N LL +L +  R   A   +  M    G  P++ TF I+
Sbjct: 175 --------MKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNIL 226

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RAL 301
           I+G   N  VDD   I  ++   G + ++  Y  ++  LCR  K+  A  + K M  +++
Sbjct: 227 IRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSV 286

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           DL P+ +TY  LI   C    ++ A  + E+M+  GL   +  +  +++GLCE  KF++ 
Sbjct: 287 DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346

Query: 362 VNFLEDKCGYVT-SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
            + LE   G  T SP     N L+ C C+AG    A  + E+M++ KI  D  +++  +R
Sbjct: 347 KDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVR 406

Query: 416 WLCENEEIRKAYELLGRMVVSSVV-------PDCATYSAFVLGKCKLCNYEDALRVFRQV 468
            LC+     KA +LL +++   ++       P  A Y+      C+    + A + FRQ+
Sbjct: 407 SLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQL 466

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    D  SY  L+ G C+        E+   M +        ++  LI GL  M K 
Sbjct: 467 MRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKP 525

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
             A++       S     +ST+  I+  L++  R  +   ++  ML
Sbjct: 526 LLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLML 571



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 194/430 (45%), Gaps = 17/430 (3%)

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++LE  F+  ++    R    +E+I++F +M++  + P  +T+  L+  L +  R + A 
Sbjct: 145 VKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAK 204

Query: 328 DILEDMI-VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
            + ++M+   G+TP    F  ++RG C  G  D+      D   +   P    +N L++ 
Sbjct: 205 KVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDG 264

Query: 383 CCNAGKFFLAKCILEKMADRKI---ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            C AGK  +A  +++ M  + +    +  ++   IR  C   EI KA  +   MV   + 
Sbjct: 265 LCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLK 324

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ-SLVLDSISYSKLVEGLCQVEKITEAVE 498
            +  TY+  + G C+   +E    +    +   +   D+ +++ L+   C    + +A++
Sbjct: 325 ANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALK 384

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-------IRLRSLAYSSGTSYTTSTYT 551
           VF  MS+      S++++ L+  LC     +KA       +  + L    G     + Y 
Sbjct: 385 VFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYN 444

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I   L +  + K       Q++  G   D  +Y  LI    ++   +       +M++ 
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRK 503

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
             +PD ET  SL++GL    +  L    + K++  S   +SS ++ ++  L ++G TS++
Sbjct: 504 DFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSES 563

Query: 672 SYLLDLMLGK 681
           + L+ LML K
Sbjct: 564 ASLIQLMLDK 573



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 129/307 (42%), Gaps = 33/307 (10%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY---- 127
           +  +L  ALK+F+ +S + + Q  + TY  ++  L   G+ E+ E L   +++ +     
Sbjct: 375 HAGNLDDALKVFERMS-ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433

Query: 128 ----PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE--K 180
               P V  A  + +F ++    +   A +    +   G +       +++G   E   +
Sbjct: 434 DGCKPLV--AAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFE 491

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
            G+   V     M++   +P+ +T   L+  L   ++   AL    +M +    PNS TF
Sbjct: 492 SGYELLVL----MLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L+   R  +S S++  M D  I+  LSF T  + +L      ++A +L  ++  
Sbjct: 548 HSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYG 607

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD------IVRGLCE 354
                  +  EELI  LC          +++   ++  +     FVD      ++  LCE
Sbjct: 608 KGY---SVKMEELIRYLCH------CRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCE 658

Query: 355 VGKFDES 361
           + K  E+
Sbjct: 659 INKLSEA 665



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 112/298 (37%), Gaps = 53/298 (17%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-------GCCPNS 237
           D + V++ M +  I P+  T + L+  L +    E A D   ++ ++       GC P  
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             +  + K L    +   +     ++   G Q   S+ T I+   C+E   E    L  +
Sbjct: 441 AAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGH-CKEGTFESGYELLVL 499

Query: 298 MRALDLMPDELTYEELINCLCENLRLDD---ANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           M   D +PD  TYE LIN L   L +D    A   LE M+     P    F  I+  L E
Sbjct: 500 MLRKDFLPDFETYESLINGL---LHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLE 556

Query: 355 VGKFDESVNFLE---------------------------DKC----------GYVTSPHN 377
            G+  ES + ++                           DK           GY +    
Sbjct: 557 QGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGY-SVKME 615

Query: 378 ALLECCCNAGKFFL-AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            L+   C+  K    +K +L  +   +  D D  N  I  LCE  ++ +A+ L  ++V
Sbjct: 616 ELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLV 673


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 150/617 (24%), Positives = 248/617 (40%), Gaps = 82/617 (13%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKR---GFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           +    +G    +V  + +++G      R   GFA        +VK G      T   LL+
Sbjct: 75  MARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAAL----GNVVKKGFRVEAITFTPLLK 130

Query: 211 VLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL--- 266
            L    R   A+D   RRM +  C P+  +  I++KGL   +R  +++ +   M D    
Sbjct: 131 GLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGG 190

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G   ++  YT +I    +E    +A   +  M    + PD +TY  +I  LC+   +D A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN--------- 377
            ++L  M+  G+ P    +  I+ G C  G+  E++ FL+        P           
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            LL+     G       +L+ M    I  D   +NI I    +  ++ +A  +  +M   
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            + PD  TY A +   CK    EDA+  F Q+  + L   +I Y+ L+ GLC   K   A
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 430

Query: 497 VEVFCCMSKNGCSLSSSSFN-----------------------------------ILIYG 521
            E+   M   G  L++  FN                                    LI G
Sbjct: 431 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            C+  K+D+A++L S   S G    T TY  ++ G  K+ R  D LV+  +M   G + D
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  Y I++Q + +  +       +  + ++G   +  T   +LHGL             N
Sbjct: 551 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK-----------N 599

Query: 642 KLVSDS-----------EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           KL  D+             L++  +NI+I+ L K G   +A  L       G VP+  T+
Sbjct: 600 KLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTY 659

Query: 691 GLL----VGSSVGEEID 703
            L+    +G  + EE+D
Sbjct: 660 RLMAENIIGQGLLEELD 676



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/468 (22%), Positives = 213/468 (45%), Gaps = 42/468 (8%)

Query: 50  YEAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMIL 104
           Y    + L   +SPD      +I  L     +  A+++   + ++        TY  ++ 
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSM-VKNGVMPNCRTYTSIMH 274

Query: 105 KLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGA---MRVLVN-MNS 159
               +G  +E  G  + +  +   P+  E  I+   + +  Y   GA   M  L++ M  
Sbjct: 275 GYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVR 334

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
            G      V+N+++ A  ++ +   + + V+ +M + G+ P+  T   ++ +L ++ R+E
Sbjct: 335 NGIHPDHYVYNILICAYAKQGK-VDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVE 393

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A+  F +M  +G  P +  +  +I GL   ++ + +  ++ EM D GI L   F+  II
Sbjct: 394 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 453

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              C+E ++ E+ +LF +M  + + PD +TY  LI+  C   ++D+A  +L  M+ +GL 
Sbjct: 454 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLK 513

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           P    +  ++ G C++ +  +++   ++      SP                        
Sbjct: 514 PNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP------------------------ 549

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
                 D  ++NI ++ L +      A EL  R+  S    + +TY+  + G CK    +
Sbjct: 550 ------DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 603

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           DALR+F+ +    L L++ +++ +++ L +V +  EA ++F   S NG
Sbjct: 604 DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNG 651



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 123/615 (20%), Positives = 233/615 (37%), Gaps = 138/615 (22%)

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            ++ +   GG    V  +  V+    +E      +   Y EM+   I P+V T + ++  
Sbjct: 182 HMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYS-TYHEMLDRRISPDVVTYSSIIAA 240

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE--------- 262
           L +   ++ A++    M K G  PN RT+  ++ G  ++ +  +++  L +         
Sbjct: 241 LCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300

Query: 263 ---------------------------MFDL----GIQLELSFYTCIIPMLCRENKLEEA 291
                                      + DL    GI  +   Y  +I    ++ K++EA
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           + +F  MR   L PD +TY  +I  LC++ R++DA    E MI  GL+P + V+  ++ G
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420

Query: 352 LCEVGKFDESVNFLED---------------------KCGYVTSP--------------- 375
           LC   K++ +   + +                     K G V                  
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
              ++ L++  C AGK   A  +L  M    +  +  ++   I   C+   +  A  L  
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFK 540

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M  S V PD                                    I+Y+ +++GL Q  
Sbjct: 541 EMESSGVSPDI-----------------------------------ITYNIILQGLFQTR 565

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +   A E++  ++++G  +  S++NI+++GLC  +  D A+R+              T+ 
Sbjct: 566 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 625

Query: 552 KIMLGLVKLQR---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            ++  L+K+ R   AKDL V  +     G   +   Y ++ +++  Q  L++    F  M
Sbjct: 626 IMIDALLKVGRNGEAKDLFVAFSS---NGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 682

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G   D   ML+ +               + +L+   E+  +  Y  +I+        
Sbjct: 683 EDNGCTVD-SGMLNFI---------------VRELLQRGEITRAGTYLSMIDEKHFSLEA 726

Query: 669 SQASYLLDLMLGKGW 683
           S AS  +DL+ G  +
Sbjct: 727 STASLFIDLLSGGKY 741


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/526 (22%), Positives = 247/526 (46%), Gaps = 9/526 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A RVL  M   G + +   +N ++         + + V V+K+M   G++P VD  N  +
Sbjct: 223 AERVLEQMVEAGTRPNSITYNSLIHGYSISGM-WNESVRVFKQMSSCGVIPTVDNCNSFI 281

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA--NSRVDDSVSILGEMFDLG 267
             LF+  R   A   F  M  KG  P+  ++  ++ G     +S + D  +I   M   G
Sbjct: 282 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 341

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I      +  +I    R   +++A+ +F+ M+   ++PD +T+  +I+ LC   RLDDA 
Sbjct: 342 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 401

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-----HNALLEC 382
                M+ IG+ P++ V+  +++G C  G+  ++   + +       P      ++++  
Sbjct: 402 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 461

Query: 383 CCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+    K I++ M    +  +  ++N  +   C    + +A+ LL  M    + P+
Sbjct: 462 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 521

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
           C  Y   V G CK    +DAL VFR +  + +   S+ YS ++ GL Q  + T A ++F 
Sbjct: 522 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 581

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M ++G ++S  ++ +++ GLC     D+A  L    ++    +   T+  ++  + K+ 
Sbjct: 582 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 641

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R ++   +   +   G   +++ Y ++I ++ ++   ++    F  + K+G   D   + 
Sbjct: 642 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 701

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
            ++  L + +++   S+ ++ +  ++  L++S  ++L +   +EG+
Sbjct: 702 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGM 747



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 122/580 (21%), Positives = 234/580 (40%), Gaps = 79/580 (13%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P + T N L++     +R +  L    R+ K G  P+  ++ + I G + +  VD +  +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKAHCL 156

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G+  ++     II  LC+  ++++A  + + M    + PD  TY  +I+ LC+
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHN 377
           +  +D A  +LE M+  G  P    +  ++ G    G ++ESV   +    CG + +  N
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 378 --ALLECCCNAGKFFLAKCILEKM----------------------ADRKIADCDS---- 409
             + +      G+   AKCI + M                       D  +AD  +    
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 410 ------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                       +NI I        + KA  +   M    ++PD  T++  +   C++  
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 458 YEDALRVFRQ--------------------------VSAQSLVLDSIS----------YS 481
            +DAL  F                            V A+ L+ + ++          +S
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC+  ++ E  ++   M + G   +  +FN L+ G C++  +++A  L     S 
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  ++ G  K  R  D L V   ML +G       Y I++  + +  +    
Sbjct: 517 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ M+++G      T   +L GL   +     +  + KL + +   D   +NI+I+ 
Sbjct: 577 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 636

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           ++K G   +A  L D +   G VP+  T+ +++ + + EE
Sbjct: 637 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 676



 Score = 38.9 bits (89), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 163 KLSVDVFNVVLGAIV-----EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           K  +  FN+V+ A+      +E +   D +  Y      G+VPN+ T + ++  L +   
Sbjct: 624 KFDIITFNIVISAMFKVGRRQEAKELFDAISTY------GLVPNIQTYSMMITNLIKEES 677

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            E A + F  + K G   +SR    +++ L+  + V  + + L  + +  + LE S  + 
Sbjct: 678 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISL 737

Query: 278 IIPMLCRENKLE 289
           +  +  RE  ++
Sbjct: 738 LASLFSREGMIK 749


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 158/618 (25%), Positives = 266/618 (43%), Gaps = 52/618 (8%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           +S D ++ VL +  D   AL  F  +S      HT +T   M+  L +   VE+M  + +
Sbjct: 87  VSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFE 146

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVLGAI 176
            M K+    +R  L + +  F     + G +R    VL  M   GF L+   +N ++  +
Sbjct: 147 FMQKKI---IRRDLDTYLTIF-KALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 177 VEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
           ++   GF  + + VY+ MV  G+ P++ T + L+  L +    E  +   + M   G  P
Sbjct: 203 IQS--GFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  TF I I+ L    ++D++  I   M D G   +L  YT +I  LC   +LE A  LF
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M+A    PD++ Y  L++   +   LD   +    M   G  P    F  +V  LC+ 
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 356 GKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
             FDE+    +   K G + + H  N L+     AG+   A  +L+ M    +       
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTY 440

Query: 412 IP-IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           I  I +  ++ E  KA E   +M    +VP+    +A +    ++    +A  +F  +  
Sbjct: 441 ITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
             L  DS++Y+ +++   +V ++ EAV +   M +NGC       N LI  L    +VD+
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDL--------------------- 566
           A ++         S T  TY  ++ GL K   +Q+A +L                     
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620

Query: 567 -----------LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
                      L + ++M V  C  DV  Y  +I  + ++NK+     FF+  +K  + P
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH-QLKKSMHP 679

Query: 616 DRETMLSLLHGLADGSQL 633
           D  T+ +LL GL    Q+
Sbjct: 680 DHVTICTLLPGLVKCGQI 697



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 143/653 (21%), Positives = 269/653 (41%), Gaps = 49/653 (7%)

Query: 93   QHTADTYCKMILKLGLAGNV-EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
            Q TA TY   I   G +G   + +E   +   K   PN+     SL +S     R+  A 
Sbjct: 434  QPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL-YSLAEMGRLREAK 492

Query: 152  RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLE 210
             +   +   G       +N+++      K G  D  V +  EM++ G  P+V  +N L++
Sbjct: 493  TMFNGLRENGLAPDSVTYNMMMKCY--SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 211  VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
             L++  R++ A   F RM      P   T+  ++ GL    RV  ++ +   M       
Sbjct: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP 610

Query: 271  ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
                +  ++   C+ +++E A+++F  M  +D  PD LTY  +I  L +  +++ A    
Sbjct: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 331  EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
              +    + P       ++ GL + G+  ++++   D    V    N         G   
Sbjct: 671  HQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 391  LA---KCIL--EKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVS-SVVPDCA 443
             A   K I+  E++    I   DS+ IP +R LC+++    AY++  +      + P  A
Sbjct: 730  EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789

Query: 444  TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            +Y+  +    ++   E A  +F+ +       D+ +++ L+    +  KITE  E++  M
Sbjct: 790  SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849

Query: 504  SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
                C   + ++NI+I  L     +DKA+       SS    T  TY  ++ GL K+ R 
Sbjct: 850  ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 564  KDLLVVLAQM-----------------------------------LVEGCALDVEAYCIL 588
            ++ + +  +M                                   + EG   D+++Y IL
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 589  IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
            +  +    ++ +   +FN +   GL PD      +++GL    ++    +  N++ +   
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 649  VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGE 700
            V D   YN L+  L   G+  QA  + + +   G  PD  T+  L+ G S+ E
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 138/616 (22%), Positives = 270/616 (43%), Gaps = 29/616 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+   I  LG AG ++E   + + M  E           L+ +  N  ++  A  + V M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFAD---FVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
            + G K       V+   ++++   F D   F   + +M   G +P+V T   L++VL +
Sbjct: 324 KANGHKPD----QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
               + A   F  M K+G  PN  T+  +I GL+   R++D++ +L  M  +G+Q     
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y   I    +  +  +A+  F+ M+A  ++P+ +     +  L E  RL +A  +   + 
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFF 390
             GL P    +  +++   +VG+ DE+VN L +       P     N+L++    AG+  
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559

Query: 391 LAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  + ++M D K++    ++N  +  L +   ++KA EL   M+     P+  +++  +
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLL 619

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
              CK    E AL++F +++      D ++Y+ ++ GL +  K+  A   F  + K   S
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK---S 676

Query: 510 LSSSSFNI--LIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           +      I  L+ GL    ++  AI + R   Y        S +  +M G + ++   D 
Sbjct: 677 MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL-VEAEMDK 735

Query: 567 LVVLAQMLVEGCALDVEAYCI-LIQSMSEQNK-LKDCALFFNVMVKAGLVPDRETMLSLL 624
            ++ A+ LV       +++ I L++ + +  + L    +F     K G+ P   +   L+
Sbjct: 736 AIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLI 795

Query: 625 HGLADGSQLHLVSSGINKLVSDSE----VLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             L    ++H      + L  D +      D+  +N+L+    K G  ++   L   M+ 
Sbjct: 796 GELL---EVHYTEKAWD-LFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851

Query: 681 KGWVPDATTHGLLVGS 696
           +   PDA T+ +++ S
Sbjct: 852 RRCKPDAITYNIVISS 867



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 118/566 (20%), Positives = 226/566 (39%), Gaps = 44/566 (7%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           ++   +T N++LE L   +++E     F  M KK    +  T+  + K L     +    
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
           ++L +M   G  L    Y  +I +L +     EA+ +++ M +  L P   TY  L+  L
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVT 373
            +    +    +L++M  +GL P    F   +R L   GK DE+        ++ CG   
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDL 297

Query: 374 SPHNALLECCCNAGKFFLAKCILEKM---------------------------------- 399
             +  L++  CNAG+   AK +  KM                                  
Sbjct: 298 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357

Query: 400 --ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
             AD  + D  ++ I +  LC+  +  +A+     M    ++P+  TY+  + G  +   
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            EDAL++   + +  +   + +Y   ++   +  +  +AVE F  M   G   +  + N 
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            +Y L  M ++ +A  + +    +G +  + TY  +M    K+ +  + + +L++M+  G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           C  DV     LI S+ +  ++ +    F+ M    L P   T  +LL GL    ++    
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
                ++      ++  +N L++   K      A  +   M      PD  T+  ++   
Sbjct: 598 ELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 698 VGEEIDSRRFAF----DSSSFPDSVS 719
           + E   +  F F      S  PD V+
Sbjct: 658 IKENKVNHAFWFFHQLKKSMHPDHVT 683



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 168/411 (40%), Gaps = 65/411 (15%)

Query: 178  EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            + KR    +    K   K GI P + + N L+  L E +  E A D F+ M   GC P++
Sbjct: 764  KHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823

Query: 238  RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             TF +++             ++ G                      +  K+ E   L+K 
Sbjct: 824  FTFNMLL-------------AVHG----------------------KSGKITELFELYKE 848

Query: 298  MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            M +    PD +TY  +I+ L ++  LD A D   D++     PT   +  ++ GL +VG+
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 358  FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
             +E++   E+   Y   P+ A+     N                 KI D ++        
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYG--------------KIGDTET-------- 946

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                    A +L  RMV   + PD  +Y+  V   C     ++AL  F ++ +  L  D 
Sbjct: 947  --------ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            I+Y++++ GL + +++ EA+ ++  M   G      ++N L+  L +   V++A R+   
Sbjct: 999  IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058

Query: 538  AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
               +G      TY  ++ G    +  +    V   M+V+GC  ++  Y  L
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 160/346 (46%), Gaps = 21/346 (6%)

Query: 4    KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRH-NLS 62
            +L +  I +K  K + ++  ++S +C     L  E  +++ H T       + +++   +
Sbjct: 768  ELYAYQIFDKFTKKLGISPTLASYNC-----LIGE--LLEVHYTEKAWDLFKDMKNVGCA 820

Query: 63   PDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
            PD      L+ V   +  ++   +++K + I +R +  A TY  +I  L  + N+++   
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEM-ISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 118  LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL---G 174
               ++V   +         L+       R+  AMR+   M+  G K +  +FN+++   G
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 175  AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
             I + +        ++K MV  GI P++ +   L++ L    R++ AL  F  +   G  
Sbjct: 940  KIGDTETACQ----LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLD 995

Query: 235  PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
            P+   +  +I GL  + R+++++++  EM + GI  +L  Y  ++  L     +E+A R+
Sbjct: 996  PDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRM 1055

Query: 295  FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            ++ ++   L PD  TY  LI     +   + A  + ++M+V G  P
Sbjct: 1056 YEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 216/510 (42%), Gaps = 5/510 (0%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y +MV     P V   N L  ++ +     +A+   + M   G  PN  T  IVI  L  
Sbjct: 66  YHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCR 125

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            +      S+LG MF +G++  +  +T I+  LC E  + +AIR    ++ +    D  T
Sbjct: 126 LNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYT 185

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
              +IN LC+      A   L+ M           +  +V GLC+ G   E+ +      
Sbjct: 186 RGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMT 245

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
           G    P    +N L+   CN  ++  A  +L  M  + I  D  ++N+      +   I 
Sbjct: 246 GKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMIS 305

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  +   M    +  D  TYS+ +   C L   +DA+ VF  +  +  + + ++Y+ L+
Sbjct: 306 RAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLI 365

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G C+++ + +A+     M  NG   +  ++N LI G C   K   A  L  + +  G  
Sbjct: 366 HGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQL 425

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               T   I+ GL K     + + +  ++      LD+  Y I++  M    KL D    
Sbjct: 426 PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALEL 485

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ +   G+  D  T   +++GL     L      + K+  +    D   YN+ + GL +
Sbjct: 486 FSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLR 545

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               S+++  L  M GKG+  +ATT  LL+
Sbjct: 546 RYEISKSTKYLMFMKGKGFRANATTTKLLI 575



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 115/496 (23%), Positives = 223/496 (44%), Gaps = 13/496 (2%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR-VDDSVSILGEMFDL 266
            L+ L     ++ ALD + +M      P  + F ++  G++A  +    ++S++  M  +
Sbjct: 49  FLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLF-GIVAKMKHYTTAISLIKHMSYI 107

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  +  +I  LCR N       +  +M  + + P  +T+  ++N LC    +  A
Sbjct: 108 GVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQA 167

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLEC 382
              ++ +  +G          I+ GLC+VG    ++++L    E  C    + +NA+++ 
Sbjct: 168 IRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDG 227

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G  F A  +  +M  + I  D  ++N  I  LC  +  ++A  LL  M+   ++PD
Sbjct: 228 LCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 287

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T++       K      A  +F  +    +  D ++YS ++   C + ++ +A+EVF 
Sbjct: 288 VQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFD 347

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + GC  +  ++  LI+G C ++ ++KA+       ++G      T+  ++ G  K  
Sbjct: 348 LMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAG 407

Query: 562 R---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           +   AK+L  V+ +    G   D++   I++  + + +   +    F  + K     D  
Sbjct: 408 KPVAAKELFFVMHK---HGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDII 464

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
               +L+G+    +L+      + L S    +D   YNI+INGL KEGL   A  LL  M
Sbjct: 465 IYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKM 524

Query: 679 LGKGWVPDATTHGLLV 694
              G  PD  T+ + V
Sbjct: 525 EENGCPPDECTYNVFV 540



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/479 (21%), Positives = 203/479 (42%), Gaps = 34/479 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+  ++  L + GNV +      ++    Y + R    +++         + A+  L  M
Sbjct: 150 TFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKM 209

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                 L V  +N V+  + ++   F  +  ++ +M   GI P++ T N L+  L   +R
Sbjct: 210 EEQNCNLDVTAYNAVVDGLCKDGMVFEAWD-LFSQMTGKGIQPDLFTYNCLIHGLCNFDR 268

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            + A      M +KG  P+ +TF ++    +    +  + SI   M  +GI+ ++  Y+ 
Sbjct: 269 WKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSS 328

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II + C  N++++A+ +F +M     +P+ +TY  LI+  CE   ++ A   L +M+  G
Sbjct: 329 IIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNG 388

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           L P    +  ++ G C+ GK   +         +V   H  L                  
Sbjct: 389 LDPNIVTWNTLIGGFCKAGKPVAAKELF-----FVMHKHGQL------------------ 425

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                   D  +  I +  L +     +A  L   +   +   D   YS  + G C    
Sbjct: 426 -------PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGK 478

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
             DAL +F  +S++ + +D ++Y+ ++ GLC+   + +A ++   M +NGC     ++N+
Sbjct: 479 LNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNV 538

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSY-TTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            + GL  +R+ + +   + L +  G  +   +T TK+++      +      V  Q  V
Sbjct: 539 FVQGL--LRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQVFLQKFV 595



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 200/500 (40%), Gaps = 59/500 (11%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN++ G IV + + +   + + K M   G+ PNV T N ++  L   N           M
Sbjct: 81  FNLLFG-IVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLM 139

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ------------------- 269
            K G  P+  TF  ++ GL     V  ++  +  + D+G +                   
Sbjct: 140 FKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHS 199

Query: 270 ----------------LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
                           L+++ Y  ++  LC++  + EA  LF  M    + PD  TY  L
Sbjct: 200 SAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCL 259

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+ LC   R  +A  +L +M+  G+ P    F  I       G+F ++      K  +  
Sbjct: 260 IHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIG------GRFLKTGMISRAKSIFSF 313

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMAD---------RK--IADCDSWNIPIRWLCENEE 422
             H  +              C+L +M D         RK  + +  ++   I   CE + 
Sbjct: 314 MGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKN 373

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + KA   LG MV + + P+  T++  + G CK      A  +F  +     + D  + + 
Sbjct: 374 MNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAI 433

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +++GL +    +EA+ +F  + K    L    ++I++ G+C   K++ A+ L S   S G
Sbjct: 434 ILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKG 493

Query: 543 TSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                 TY  ++ GL K   L  A+DLL+   +M   GC  D   Y + +Q +  + ++ 
Sbjct: 494 VKIDVVTYNIMINGLCKEGLLDDAEDLLM---KMEENGCPPDECTYNVFVQGLLRRYEIS 550

Query: 600 DCALFFNVMVKAGLVPDRET 619
               +   M   G   +  T
Sbjct: 551 KSTKYLMFMKGKGFRANATT 570



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 141/361 (39%), Gaps = 48/361 (13%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           HN ++ C C          +L  M    +     ++   +  LC    + +A   +  + 
Sbjct: 116 HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 175

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                 D  T  A + G CK+ +   AL   +++  Q+  LD  +Y+ +V+GLC+   + 
Sbjct: 176 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVF 235

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA ++F  M+  G      ++N LI+GLC   +  +A  L +     G      T+  I 
Sbjct: 236 EAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIG 295

Query: 555 LGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
              +K   + RAK +   +  M +E    DV  Y  +I      N++KD    F++M++ 
Sbjct: 296 GRFLKTGMISRAKSIFSFMGHMGIEH---DVVTYSSIIGVHCMLNQMKDAMEVFDLMIRK 352

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G +P+  T  SL+HG  +   +                                   ++A
Sbjct: 353 GCLPNIVTYTSLIHGWCEIKNM-----------------------------------NKA 377

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAF---DSSSFPD-SVSDILAEG 725
            Y L  M+  G  P+  T   L+G     G+ + ++   F        PD     I+ +G
Sbjct: 378 MYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDG 437

Query: 726 L 726
           L
Sbjct: 438 L 438



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 4/272 (1%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A +   +MV     P    ++       K+ +Y  A+ + + +S   +  +  +++ ++ 
Sbjct: 62  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVIN 121

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC++        V   M K G   S  +F  ++ GLCV   V +AIR   + +     Y
Sbjct: 122 CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRF--VDHLKDMGY 179

Query: 546 TTSTYTK--IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
            +  YT+  I+ GL K+  +   L  L +M  + C LDV AY  ++  + +   + +   
Sbjct: 180 ESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWD 239

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F+ M   G+ PD  T   L+HGL +  +    +  +  ++    + D   +N++     
Sbjct: 240 LFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFL 299

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           K G+ S+A  +   M   G   D  T+  ++G
Sbjct: 300 KTGMISRAKSIFSFMGHMGIEHDVVTYSSIIG 331


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 209/418 (50%), Gaps = 17/418 (4%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N +L   V+ +R   D    ++  +K    P+  + N L+   F+   ++ AL  F  M 
Sbjct: 106 NNLLSVYVKARR-VEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMK 164

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G     R+  IV++GL +  ++  +  +  +M  +     L  YT +I  LC+  K++
Sbjct: 165 DSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVD 222

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +AI LFK M    + PD +TY  LI+ L +  R+ +A D+ E+    G  PT   +  ++
Sbjct: 223 KAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI 282

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPH--------NALLECCCNAGKFFLAKCILEKMAD 401
            GLC+ G+ + ++   +D    V  PH        +AL+     + +   A  + E+M D
Sbjct: 283 DGLCKCGRIENALTLYDD---MVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLD 339

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV-PDCATYSAFVLGKCKLCNYE 459
              + D  ++N  +  LC++    KA E+  +M V +V  P+  TY+  +   CK+    
Sbjct: 340 TGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLG 399

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           DA+++ +++  +SL+ D+++++ +++ LC+  +I EA E+F  + K  C   S  FN ++
Sbjct: 400 DAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTML 458

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            G C + ++D A +L      SG + T +TYT ++ G  +  R  D L++  +M+  G
Sbjct: 459 AGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMG 516



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 219/477 (45%), Gaps = 42/477 (8%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL-AGNVEEMEGLC 119
           L PD + +V+    D ++A ++F+W   Q +F H   T C  +L + + A  VE+     
Sbjct: 67  LVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFT-CNNLLSVYVKARRVEDAHLFF 125

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           Q+ +K  +     +  +L+  F     V  A+ +   M   G  + +   N+VL  +   
Sbjct: 126 QSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSG 184

Query: 180 KRGFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            +  +    V+K+M  +GI  PN+ +   +++ L ++ +++ A+  F++M  K   P+  
Sbjct: 185 GK-ISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVV 241

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KM 297
           T+  +I GL    RV ++  +  E    G    +  Y  +I  LC+  ++E A+ L+  M
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           +R   L PD  TY  LIN L  + R + A ++ E+M+  G +P    +  ++ GLC+ G 
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSG- 360

Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIR 415
                   EDK                       A  I  KM    + D +  ++ + I 
Sbjct: 361 -------CEDK-----------------------AMEIFRKMGVGNVCDPNVITYTVLID 390

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C+ + +  A +L   M   S++PD  T++  +   CK    ++A  +F  +  ++   
Sbjct: 391 RFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKP 449

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           DS+ ++ ++ G C++ +I +A ++   M  +GC+ + +++  L+ G C   +   A+
Sbjct: 450 DSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDAL 506



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 174/397 (43%), Gaps = 12/397 (3%)

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF- 364
           +  T   L++   +  R++DA+   +  +     P +  +  ++ G  + G   +++   
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 365 --LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
             ++D    V   HN +L   C+ GK  +A  + + M+     +  S+ I I  LC++ +
Sbjct: 161 GEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRK 220

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + KA  L  +MV  ++ PD  TY A + G  K    ++A  +F +  A+      ++Y+ 
Sbjct: 221 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 280

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNG-CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           +++GLC+  +I  A+ ++  M +         +++ LI GL +  + +KA  L      +
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT 340

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKD 600
           G S    TY  ++ GL K       + +  +M V   C  +V  Y +LI    + ++L D
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQL---HLVSSGINKLVSDSEVLDSSMYNI 657
                  M    L+PD  T  +++  L   S++   H +   I K        DS ++N 
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKP----DSVLFNT 456

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++ G  K      A  L D ML  G  P   T+  LV
Sbjct: 457 MLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALV 493



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 150 AMRVLVNMNSGGF-KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
           AM +   M  G     +V  + V++    +  R   D V + KEM    ++P+  T   +
Sbjct: 365 AMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDR-LGDAVKLAKEMEGRSLLPDAVTFTTV 423

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L + +RI+ A + F  + K  C P+S  F  ++ G    +R+DD+  +   M D G 
Sbjct: 424 IQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGC 482

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
              L+ YT ++   CR  +  +A+ ++  M  +   P E    EL++
Sbjct: 483 APTLATYTALVTGFCRTGRYSDALIMYHEMIEMGF-PPERHLAELVD 528


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 155/691 (22%), Positives = 287/691 (41%), Gaps = 96/691 (13%)

Query: 43  KSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKM 102
           +S      E  ++ L  +L P  +  VL   +D   AL  F W   Q R++H    Y  M
Sbjct: 83  RSAWNAKLEGDLRRLLRSLKPRQVCAVLQLQSDERIALDFFYWAGRQWRYRHDPIVYYMM 142

Query: 103 ILKLGLAGNVEEMEGLCQNMVK----------ERYPNVREALISLVFSFVNHYRVNGAMR 152
           +        V     LCQ   +           R P   EA   ++ S+    ++  AM+
Sbjct: 143 L-------QVLSKTKLCQGARRVLRLMVRRGIARRP---EAFAHVMVSYSRAGKLRNAMQ 192

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           VL  M                                     KAG+ PN+   N  + VL
Sbjct: 193 VLTMMQ------------------------------------KAGVEPNLLICNTAIHVL 216

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
              N++E AL    RM   G  PN  T+  +IKG     +V+ ++ ++ EM   G   + 
Sbjct: 217 VMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDK 276

Query: 273 SFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
             Y  ++  LC++ +++E   L  KM++   L PD++TY  L++ L ++   D+A + L 
Sbjct: 277 VSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLR 336

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
           +                           E   F  DK GY     +A++   C  G+   
Sbjct: 337 ET--------------------------EERGFQVDKVGY-----SAIVNSFCMQGRMDR 365

Query: 392 AKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           AK I+ +M  +  + D  ++   +  LC+  ++ +A ++L +M      P+  +Y+A + 
Sbjct: 366 AKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLN 425

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G C+  N  +A  +           ++I+YS ++ GL +  K++EA +V   M   G   
Sbjct: 426 GLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFP 485

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +    N+LI  LC+ +K+++A +      + G +     +T ++ G  +       L +L
Sbjct: 486 TPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLL 545

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             M +     D   +  +I ++ ++ ++++  ++   M+K GL P   T  +++H     
Sbjct: 546 DDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKM 605

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++  +   + K++S S+    + YN +I  L   G    A  ++ L+L      DA T 
Sbjct: 606 GRVEELIKLLGKMLSRSKC--RTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTC 663

Query: 691 GLLVGS--SVGEEIDSRRFA---FDSSSFPD 716
            +L+ S  S G  + + + A   FD +  PD
Sbjct: 664 HMLMESYLSKGIPLSAYKVACRMFDRNLIPD 694


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/529 (23%), Positives = 233/529 (44%), Gaps = 26/529 (4%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  +++ G+ P+V + N L++   +   ++ A D F +M ++G  PN  T+  +I GL 
Sbjct: 211 VFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLC 270

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               +D +  +L +M   G++     Y C+I         +E++R+FK M +  L+PD  
Sbjct: 271 KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVG 330

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG---KFDESVNFL 365
                +  LC++ R+ +A DI + M++ G  P    +  ++ G    G     D   N +
Sbjct: 331 NCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVM 390

Query: 366 EDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
             + G V   H  N L+      G    +  + E M  + +  D  +++  I   C    
Sbjct: 391 VCE-GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGR 449

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS--- 479
           +  A E    M+ + V PD A YS  + G+   CN  D       V A+ L+ D +S   
Sbjct: 450 LDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ---CNRRDL------VKAKELISDMLSKGI 500

Query: 480 -------YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
                  ++ ++  LC+  ++ E  +V   +   G   +  +FN L+ G C++  + +A+
Sbjct: 501 PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAV 560

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L     S G      TY  ++ G  K  R  D L +   ML +   L   +Y I++  +
Sbjct: 561 GLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 620

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +  +       F+ M+++G+     T  ++L GL   +     +  + KL S +   D 
Sbjct: 621 FQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 680

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             +NI+I  ++K G   +A  L   +   G VP   T+ +++ + + EE
Sbjct: 681 LTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 729



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 131/598 (21%), Positives = 259/598 (43%), Gaps = 32/598 (5%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  +I      G V++   L   M ++   PNV     SL+        ++ A RVL  
Sbjct: 226 SYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNV-VTYSSLINGLCKTKEMDKAERVLRQ 284

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G + +   +N ++         + + V V+KEM  + +VP+V   N  +  L +  
Sbjct: 285 MVGAGVRPNNMTYNCLIHGYSTSGM-WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHG 343

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           RI+ A D F  M  KG  P+  ++  ++ G      +    ++   M   G+  +   + 
Sbjct: 344 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 403

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I    R   +++++ +F+ M    + PD +T+  +I+  C   RLDDA +    MI  
Sbjct: 404 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 463

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+ P   V+  +++G C      ++   + D       P      C     KFF +    
Sbjct: 464 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP-----PCI----KFFTSI--- 511

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
                            I  LC+   + +  +++  ++ +   P+  T+++ V G C + 
Sbjct: 512 -----------------INNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 554

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           N ++A+ +   + +  +  D  +Y+ LV+G C+  +I +A+ +F  M     +L+S S+N
Sbjct: 555 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 614

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           I+++GL   R+   A  +      SG + +  TY  ++ GL +     +  ++L ++   
Sbjct: 615 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM 674

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
               D+  + I+I++M +  + ++    F  +   GLVP   T   ++  L         
Sbjct: 675 NVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDA 734

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +  + +   S   DS + N +I  L  +G  ++A   L  +  KG +P+ATT  LL+
Sbjct: 735 DNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 208/485 (42%), Gaps = 9/485 (1%)

Query: 221 ALDQFRRMHKKGC---CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           A++ F+RM +  C    P   T+ I+I       R D  + + G +   G+  ++  Y  
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +E ++++A  LF  M    +MP+ +TY  LIN LC+   +D A  +L  M+  G
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAK 393
           + P +  +  ++ G    G + ESV   ++    +  P     N+ +   C  G+   A+
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349

Query: 394 CILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I + M  +    D  S+   +        I     L   MV   VVPD   ++  +   
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            +L   + +L +F  ++ Q +  D I++S ++   C++ ++ +A+E F  M   G    +
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 469

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT-TSTYTKIMLGLVKLQRAKDLLVVLA 571
           + ++ LI G C  R + KA  L S   S G        +T I+  L K  R  +   V+ 
Sbjct: 470 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 529

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            ++  G   ++  +  L+        +K+     + M   G+ PD  T  +L+ G     
Sbjct: 530 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 589

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           ++    +    ++     L S  YNI+++GL++   T  A  +   M+  G      T+ 
Sbjct: 590 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYA 649

Query: 692 LLVGS 696
            ++G 
Sbjct: 650 TVLGG 654



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/414 (20%), Positives = 177/414 (42%), Gaps = 44/414 (10%)

Query: 168 VFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           VFN ++ A    + G  D  + ++++M K G+ P++ T + ++       R++ A+++F 
Sbjct: 401 VFNTLINAYA--RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE-LSFYTCIIPMLCRE 285
            M   G  P++  +  +I+G      +  +  ++ +M   GI    + F+T II  LC+E
Sbjct: 459 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 518

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++ E   +  ++      P+ +T+  L++  C    + +A  +L+ M  +G+ P    +
Sbjct: 519 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 578

Query: 346 VDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
             +V G C+ G+ D+++    D    +    +  +N +L     A +  +AK +  +M +
Sbjct: 579 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 638

Query: 402 RKIA------------------------------------DCDSWNIPIRWLCENEEIRK 425
             +A                                    D  ++NI IR + +    ++
Sbjct: 639 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 698

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A EL   +    +VP   TY   +    K  ++EDA  +F  +   S   DS   ++++ 
Sbjct: 699 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 758

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            L    ++ +A      + K G    +++ ++LIY   V  K  + I+L    Y
Sbjct: 759 MLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKY 812


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 224/526 (42%), Gaps = 22/526 (4%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G VP     N L++       +   L     M  KG  P   T+  +I  L   S +   
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
            S+L EM + G+   +  Y  +I  LC+     +A+ +   M A    PD +T+  LI  
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAA 425

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
            C    +++A  +L + I   L P    +  ++ G C  G+   + + L +  G   +P 
Sbjct: 426 FCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPD 485

Query: 377 ----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
                AL+     +G+   A  + EKMA+R++  D + +N+ I  LC+   +  A  LL 
Sbjct: 486 VVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLV 545

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M+   V PD   Y+  + G  +     DA ++F  +  +    D ++Y+ +++G C+  
Sbjct: 546 EMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSG 605

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EAV     M K GC     ++  LI G      +  A+R               TY 
Sbjct: 606 MMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYA 665

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G   +       V+ A M  EG   +V  Y +LI S+ +++K    A +F  M+  
Sbjct: 666 SLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLN 725

Query: 612 GLVPDRETMLSLLHGL------------ADGSQLHLVSSGIN---KLVSDSEVLDSSMYN 656
              P+  TM  L++GL            +D  Q H  S+ ++    L+SD      S YN
Sbjct: 726 HCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYN 785

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG-SSVGE 700
            +I  L +  +  +A  L + M  KG +PD  T   LL G SSVG+
Sbjct: 786 AIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 207/483 (42%), Gaps = 30/483 (6%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           +L  M   G   +V ++N V+ A+ +  R  +  + V  +MV +   P+V T N L+   
Sbjct: 368 LLWEMKERGLSPNVQIYNTVIYALCK-CRSASQALAVLNQMVASRFDPDVVTFNTLIAAF 426

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
                +E AL   R   ++   PN  ++  +I G      V  +  +L EM   G   ++
Sbjct: 427 CREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDV 486

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
                +I  L    +++EA+ + + M    +MPD   Y  LI+ LC+   L  A ++L +
Sbjct: 487 VTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVE 546

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDES---VNFLEDKCGYV-TSPHNALLECCCNAGK 388
           M+   + P   V+  ++ G     K  ++     F+E+K GY     +NA+++  C +G 
Sbjct: 547 MLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGM 606

Query: 389 FFLAKCILEKMADRK---IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
              A   +  M  RK   I D  ++   I    +  +I+ A   L  M+     P+  TY
Sbjct: 607 MNEAVMCMSSM--RKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTY 664

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           ++ + G C + N + A  +F  + ++ L  + + Y+ L+  L + +K  +A   F  M  
Sbjct: 665 ASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLL 724

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           N CS + ++ + L+ GL            R    +S  S T   + K             
Sbjct: 725 NHCSPNDATMHYLVNGL---------TNCRYGMINSNCSDTDQAHKK-----------SA 764

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           LL V   ++ +G    + AY  +I S+   N L         M   G +PD  T LSLL+
Sbjct: 765 LLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLY 824

Query: 626 GLA 628
           G +
Sbjct: 825 GFS 827



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 176/426 (41%), Gaps = 39/426 (9%)

Query: 274 FYTCI-IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + TC+ +  LC E ++EE  RL +       +P  + Y  LI+  C    +     +L +
Sbjct: 277 YSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGE 336

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           M + G+ PT   +  I+  L   G+  +                                
Sbjct: 337 MEMKGIMPTVVTYGAIIHWL---GRKSDLTKI---------------------------- 365

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           + +L +M +R ++ +   +N  I  LC+     +A  +L +MV S   PD  T++  +  
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAA 425

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+  + E+AL++ R+   + L  + +SY+ L+ G C   ++  A ++   M   G +  
Sbjct: 426 FCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPD 485

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLV 568
             +   LI+GL V  +VD+A+ +R            + Y  ++ GL K   L  AK+LLV
Sbjct: 486 VVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLV 545

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
              +ML +    D   Y  LI      +KL D    F  M + G   D     +++ G  
Sbjct: 546 ---EMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYC 602

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               ++     ++ +     + D   Y  LI+G  K+G    A   L  M+ +   P+  
Sbjct: 603 KSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIV 662

Query: 689 THGLLV 694
           T+  L+
Sbjct: 663 TYASLI 668



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/497 (21%), Positives = 204/497 (41%), Gaps = 58/497 (11%)

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRV 147
           K    T  TY  +I  LG   ++ ++E L   M KER   PNV +   +++++       
Sbjct: 340 KGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEM-KERGLSPNV-QIYNTVIYALCKCRSA 397

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE--------------KRGFADFVFVYK-- 191
           + A+ VL  M +  F   V  FN ++ A   E              +R        Y   
Sbjct: 398 SQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPL 457

Query: 192 ------------------EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
                             EM+  G  P+V TL  L+  L  + +++ AL    +M ++  
Sbjct: 458 IHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQV 517

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P++  + ++I GL     +  + ++L EM +  +Q +   YT +I    R +KL +A +
Sbjct: 518 MPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARK 577

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           +F+ M       D + Y  +I   C++  +++A   +  M  +G  P +  +  ++ G  
Sbjct: 578 IFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYA 637

Query: 354 EVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCD 408
           + G    ++ FL D    +C      + +L+   CN G    A+ +   M    +  +  
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVV 697

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG--KCKL------CNYED 460
            + + I  L + ++  +A      M+++   P+ AT    V G   C+       C+  D
Sbjct: 698 HYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTD 757

Query: 461 A-------LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                   L VF+ + +  L     +Y+ ++  LC+   + +A+E+   MS  GC     
Sbjct: 758 QAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPV 817

Query: 514 SFNILIYGLCVMRKVDK 530
           +F  L+YG   + K  K
Sbjct: 818 TFLSLLYGFSSVGKSGK 834



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 156/373 (41%), Gaps = 8/373 (2%)

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCE---VGKFDESVNFLEDKCGYVT-SPH-NALLECCC 384
           L  M + G+TPT      +     +     K  E+     D  G +  +PH N LL    
Sbjct: 191 LRSMSLAGVTPTRGSLGALAAAYADAGMEAKAAEACARARDLHGALPDAPHCNRLLRLLV 250

Query: 385 NAGKFFLAKCILEKMADRKI---ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
           +  ++  A+ +  +M  R     AD  S  + +R LC    + +   L+        VP 
Sbjct: 251 DRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPG 310

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              Y+  + G C+  +    L +  ++  + ++   ++Y  ++  L +   +T+   +  
Sbjct: 311 AVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLW 370

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G S +   +N +IY LC  R   +A+ + +   +S       T+  ++    +  
Sbjct: 371 EMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREG 430

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
             ++ L +L + +      +  +Y  LI     + ++   +     M+  G  PD  T+ 
Sbjct: 431 DVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLG 490

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           +L+HGL    Q+        K+     + D+++YN+LI+GL K+ + S A  LL  ML +
Sbjct: 491 ALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQ 550

Query: 682 GWVPDATTHGLLV 694
              PD   +  L+
Sbjct: 551 KVQPDKFVYTTLI 563


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 141/600 (23%), Positives = 258/600 (43%), Gaps = 48/600 (8%)

Query: 141  FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
            F+++Y  +G    A++    M + G   ++   N  L ++ E+ R   +    +  + K 
Sbjct: 443  FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGR-LEEAKEFFNGLKKC 501

Query: 197  GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            G+ P+  T N L+    +  R++ A+     M + GC P       +I  L    RVD++
Sbjct: 502  GLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEA 561

Query: 257  VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
              +   M ++ +   +  Y  ++  L +E +++EA  LFK M A D  P+ +++  L++C
Sbjct: 562  WKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDC 621

Query: 317  LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
            LC+N  +D A  +L  M  +   P    +  ++ GL +  + + +  +L  +   V  P 
Sbjct: 622  LCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAF-WLFHQMKKVIYPD 680

Query: 377  N----ALLECCCNAGK----FFLAKCILEKMADRK------------------------- 403
                  LL      G+    F +AK  +  + D                           
Sbjct: 681  YVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFA 740

Query: 404  -------IADCDSWNIP-IRWLCENEEIRKAYELLGRMVVS-SVVPDCATYSAFVLGKCK 454
                   I + DS  IP +++LC++ +   AY +  ++  S  + P    Y++ + G  K
Sbjct: 741  ESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLK 800

Query: 455  LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                E A  +F ++       D  +Y+  ++ L +  KI E  +++  M   GC  ++ +
Sbjct: 801  ARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTIT 860

Query: 515  FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
             NI+I+GL     +DKAI L     S   S T  TY  ++ GL+KL R ++      +ML
Sbjct: 861  HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML 920

Query: 575  VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
              GC  +   Y IL+    +Q  ++     F  MVK G+ PD ++   ++  L    ++ 
Sbjct: 921  DYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980

Query: 635  LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                   +L       D   YN++INGL +     +A  L D M  +G  PD  T+  L+
Sbjct: 981  DALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALI 1040



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 257/581 (44%), Gaps = 24/581 (4%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN-VEEME--- 116
           +S + + RVL + +D + A   F  V+   R  HT +T C  +L++  A   VE+M    
Sbjct: 87  MSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTET-CNYVLEMLRAHRRVEDMVVVF 145

Query: 117 GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVV 172
            L Q  + +R  N    +  +++       + G +R     L  M   GF L+   +  +
Sbjct: 146 NLMQKQIIKRSINTYLTIFKVLY-------IRGGLREAPVALEKMRKVGFVLNGYSYIGL 198

Query: 173 LGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           +  ++  K GF  + + VY+ MV  GI P++ T + L+  L +   IE+ +   + M   
Sbjct: 199 IHLLL--KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  PN  TF I I+ L    ++D++  IL  M D G   ++  YT +I  LC   KL  A
Sbjct: 257 GLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNA 316

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             LF  M+A    PD +TY  L++   ++  LD   +   +M   G  P    F  ++  
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376

Query: 352 LCEVGKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-AD 406
           LC+VGK DE+   L+   K G   + H  N L+       +   A  +   M    +   
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++ + I +  ++ E  KA +   +M  + +VP+    +A +    +    E+A   F 
Sbjct: 437 AYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFN 496

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +    L  D+I+Y+ L+    +  ++ +A+++   M +NGC       N LI  L    
Sbjct: 497 GLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKAD 556

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           +VD+A ++         + T  TY  ++ GL K  R ++   +   M+ + C  +  ++ 
Sbjct: 557 RVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFN 616

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            L+  + +  ++         M +    PD  T  ++++GL
Sbjct: 617 TLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGL 657



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 128/569 (22%), Positives = 241/569 (42%), Gaps = 43/569 (7%)

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           VL +I +  + F+ F  V  EM +  ++   +T NY+LE+L    R+E  +  F  M K+
Sbjct: 95  VLKSISDPNQAFSFFNSV-AEMPR--VIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQ 151

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
               +  T+  + K L     + ++   L +M  +G  L    Y  +I +L +     EA
Sbjct: 152 IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREA 211

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           +++++ M +  + P   TY  L+  L +   ++    +L++M  +GL P    F   +R 
Sbjct: 212 LKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRI 271

Query: 352 LCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-------- 399
           L   GK DE+   L    +  CG     +  L++  CNAGK   AK +  KM        
Sbjct: 272 LGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPD 331

Query: 400 ----------------------------ADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
                                       AD  + D  ++ I I  LC+  ++ +A+  L 
Sbjct: 332 RVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLD 391

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    V P+  TY+  + G  +L   ++AL +F  + +  L   + +Y   ++   +  
Sbjct: 392 VMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSG 451

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +  +A++ F  M  NG   +  + N  +Y L    ++++A    +     G +    TY 
Sbjct: 452 ESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYN 511

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +M    K  R  D + +L++M   GC  +V     LI ++ + +++ +    F  M + 
Sbjct: 512 ILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEM 571

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            L P   T  +LL GL    ++   ++    +++D    ++  +N L++ L K G    A
Sbjct: 572 KLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLA 631

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
             +L  M      PD  T+  ++   + E
Sbjct: 632 LKMLFRMTEMNCFPDVLTYNTVIYGLIKE 660



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 121/573 (21%), Positives = 247/573 (43%), Gaps = 44/573 (7%)

Query: 96   ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
            A TY  ++   G AG V++   L   M +         + SL+ +     RV+ A ++  
Sbjct: 507  AITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQ 566

Query: 156  NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
             M       +V  +N +L  + +E R   +   ++K M+     PN  + N LL+ L + 
Sbjct: 567  RMKEMKLAPTVVTYNTLLAGLGKEGR-VQEATALFKGMIADDCPPNTISFNTLLDCLCKN 625

Query: 216  NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
              ++ AL    RM +  C P+  T+  VI GLI  +RV+ +  +  +M  + I  +    
Sbjct: 626  GEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTL 684

Query: 276  TCIIPMLCRENKLEEAIRLFK-MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
              ++P + ++ ++E+A R+ K  +  +    D   +E+L+  +     +  +    E ++
Sbjct: 685  CTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLV 744

Query: 335  VIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTSP----HNALLECCCNAGKF 389
               +   D V + +V+ LC+ GK  ++ N FL+    +  +P    +N+L++    A   
Sbjct: 745  CNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLT 804

Query: 390  FLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             +A  +  KM +     D  ++N+ +  L ++ +I++ ++L   M+     P+  T++  
Sbjct: 805  EMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIV 864

Query: 449  VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
            + G  K  + + A+ ++  + +        +Y  L++GL ++ ++ EA + F  M   GC
Sbjct: 865  IFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC 924

Query: 509  SLSSSSFNILIYG-----------------------------------LCVMRKVDKAIR 533
              +   +NIL+ G                                   LC++ KVD A+ 
Sbjct: 925  MPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALH 984

Query: 534  LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                   SG       Y  ++ GL + QR ++ L +  +M   G   D+  Y  LI ++ 
Sbjct: 985  YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLG 1044

Query: 594  EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                +++    +  +   GL P+  T  +L+ G
Sbjct: 1045 IAGMVEEAGKMYEELQLKGLEPNVFTYNALIRG 1077



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 130/601 (21%), Positives = 241/601 (40%), Gaps = 78/601 (12%)

Query: 64   DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            + LI  L   + +  A K+F+ +  + +   T  TY  ++  LG  G V+E   L + M+
Sbjct: 546  NSLIDTLYKADRVDEAWKMFQRMK-EMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604

Query: 124  KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
             +  P    +  +L+     +  V+ A+++L  M        V  +N V+  +++E R  
Sbjct: 605  ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENR-- 662

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEI 242
             ++ F     +K  I P+  TL  LL  + +  RIE A    +  +H  G   +   +E 
Sbjct: 663  VNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWED 722

Query: 243  VIKGLIANSRV-----------------DDSVSIL--------GEMFD-LGIQLELSFYT 276
            ++ G++  + +                 DDSV I         G+  D   + L+L+   
Sbjct: 723  LMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSF 782

Query: 277  CIIPMLCRENKL----------EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
            CI P L   N L          E A  LF  M+     PD  TY   ++ L ++ ++ + 
Sbjct: 783  CITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKEL 842

Query: 327  NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             D+ E+M+  G  P       ++ GL +    D++++   D      SP    +  L++ 
Sbjct: 843  FDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDG 902

Query: 383  CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
                G+   AK   E+M D                                     +P+C
Sbjct: 903  LLKLGRLEEAKQFFEEMLD----------------------------------YGCMPNC 928

Query: 443  ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
              Y+  + G  K  + E A  +FR++  + +  D  SYS +V+ LC V K+ +A+  F  
Sbjct: 929  PLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEE 988

Query: 503  MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
            +  +G       +N++I GL   ++V++A+ L     + G +    TY  ++L L     
Sbjct: 989  LKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGM 1048

Query: 563  AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             ++   +  ++ ++G   +V  Y  LI+  S           +  M+  G  P+  T   
Sbjct: 1049 VEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQ 1108

Query: 623  L 623
            L
Sbjct: 1109 L 1109


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 220/530 (41%), Gaps = 38/530 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  + G IV+ K  +A  + + K     G+ P+V TL  ++  L               M
Sbjct: 10  FATLFGVIVKMKH-YATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAM 68

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P   TF  +I GL A   V  +      + D+G +     +  II  LC+    
Sbjct: 69  FKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDT 128

Query: 289 EEAIRLFKMM----RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             AI   + +    R  DL+   + Y  +++ LC++  L  A +    M   G+ P    
Sbjct: 129 AGAISYLEKIEGRNRGFDLL---IAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVA 185

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  ++ GLC  G+++E+   L +                               M    +
Sbjct: 186 YNSLIHGLCSFGRWNEATTLLGNM------------------------------MRKGIM 215

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  ++N+ +   C+  +I +A  ++  MV   V PD  TY++ + G C L    DA++V
Sbjct: 216 PNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKV 275

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +  + L+ + ++YS L+ G C+   I +A+ V   M  NG +L   +++ LI G C 
Sbjct: 276 FELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCK 335

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             + + AI L    +         T   I+ GL K Q   + + +  +M      L++  
Sbjct: 336 AGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVT 395

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y I++  M    K  D    F+ +   G+  D     +++ GL     L      + K+ 
Sbjct: 396 YNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKME 455

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +    +   YN+L+ GL +    S+++  L LM GKG   DATT  LL+
Sbjct: 456 ENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLI 505



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 150/343 (43%), Gaps = 19/343 (5%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE-KRGFADFVFVYKEMV 194
           SL+    +  R N A  +L NM   G   +V  FNV++    +E K   A  +  +  MV
Sbjct: 188 SLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCF--MV 245

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G+ P+V T N ++      +++  A+  F  M  KG  PN  T+  +I G      ++
Sbjct: 246 HVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNIN 305

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            ++ +L EM + G+ L++  ++ +I   C+  + E AI LF  M     +P+  T   ++
Sbjct: 306 KAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIIL 365

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-------- 366
           + L +     +A  +   M  + L      +  ++ G+C  GKF+++             
Sbjct: 366 DGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQ 425

Query: 367 -DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIR 424
            D   Y T     +++  C  G    A+ +L KM +      + ++N+ +R L +  +I 
Sbjct: 426 IDVVAYTT-----MIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDIS 480

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
           ++ + L  M    +  D AT +  ++          AL+VF Q
Sbjct: 481 RSTKYLMLMKGKGLSAD-ATTTELLISYFSANKENSALQVFLQ 522



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 11/297 (3%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  +  I I  LC  +     + +LG M    V P   T++  + G C   N   A R  
Sbjct: 41  DVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFA 100

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
             +       +S ++  ++ GLC+V     A+              +  F++LI    +M
Sbjct: 101 DSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYL-----EKIEGRNRGFDLLIAYSTIM 155

Query: 526 RKVDK------AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             + K      A+   S     G       Y  ++ GL    R  +   +L  M+ +G  
Sbjct: 156 DSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIM 215

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +V+ + +L+ +  ++ K+         MV  G+ PD  T  S++ G    SQ++     
Sbjct: 216 PNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKV 275

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              ++    + +   Y+ LI+G  K    ++A ++LD M+  G   D  T   L+G 
Sbjct: 276 FELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGG 332


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 215/471 (45%), Gaps = 19/471 (4%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           R   S D L RVL    DL  A+++ +  S+       A     +I KL  +G   E   
Sbjct: 55  RSAASNDRL-RVLVRRGDLEEAIRLVE--SMAGLEPSAAGPCAALIKKLCASGRTAE--- 108

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
             + ++    P+V  +  ++V  +    +++ A R++  M     +     +N ++  + 
Sbjct: 109 -ARRVLASCEPDVM-SYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLC 163

Query: 178 EEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
              RG  D    V  +M++ G VP+V T   LLE   + +  + A+     M  KGC P+
Sbjct: 164 --GRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPD 221

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
             T+ +V+ G+    RVDD++  L  +   G +     Y  ++  LC   + E+A +L  
Sbjct: 222 IVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 281

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M      P+ +T+  LI+ LC    ++ A +IL+ +   G TP    +  I+   C+  
Sbjct: 282 EMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQK 341

Query: 357 KFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWN 411
           K D ++ F+E      C      +N LL   C  G+   A  +L ++ D+       S+N
Sbjct: 342 KMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYN 401

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I  L +  +  +A ELL  MV   + PD  TYS    G C+    E+A++ F +V   
Sbjct: 402 TVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM 461

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  +++ Y+ ++ GLC+      A+++F  M  NGC  + S++ ILI GL
Sbjct: 462 GIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGL 512



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 179/383 (46%), Gaps = 5/383 (1%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+  T N L+  L    R ++AL     M ++GC P+  T+ I+++     S    +V +
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L EM D G   ++  Y  ++  +C+E ++++A+   K + +    P+ ++Y  ++  LC 
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             R +DA  ++ +M   G  P    F  ++  LC  G  + ++  L+    Y  +P    
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N +L   C   K   A   +E M       D  S+N  +  LC   E+  A ELL ++ 
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P   +Y+  + G  K    E+AL +  ++  + L  D I+YS +  GLC+  +I 
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA++ FC +   G   ++  +N ++ GLC  R    AI L +   S+G     STYT ++
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 555 LGLVKLQRAKDLLVVLAQMLVEG 577
            GL      K+   ++A++   G
Sbjct: 510 EGLAYEGLVKEAREMMAELCSRG 532



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 216/504 (42%), Gaps = 17/504 (3%)

Query: 188 FVYKEMVKAGIVPNVDTL-NYLLEVLFETNRIESALDQFRRMHKKGCCPNSR-TFEIVIK 245
             Y   V    VP+     N  L VL     +E A+     M   G  P++      +IK
Sbjct: 41  LAYAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIK 98

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L A+ R  ++  +L        + ++  Y  ++   C   +L+ A RL     A+ + P
Sbjct: 99  KLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVA---AMPMEP 150

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D  TY  LI  LC   R D+A  +L+DM+  G  P    +  ++   C+   + ++V  L
Sbjct: 151 DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLL 210

Query: 366 ED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
           ++     C      +N ++   C  G+   A   L+ +       +  S+NI ++ LC  
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA 270

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           E    A +L+  M      P+  T++  +   C+    E A+ +  Q+       +S+SY
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++   C+ +K+  A+     M  +GC     S+N L+  LC   +VD A+ L      
Sbjct: 331 NPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G +    +Y  ++ GL K  + ++ L +L +M+ +G   D+  Y  +   +  + ++++
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEE 450

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F  +   G+ P+     ++L GL      H        +VS+  + + S Y ILI 
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510

Query: 661 GLWKEGLTSQASYLLDLMLGKGWV 684
           GL  EGL  +A  ++  +  +G V
Sbjct: 511 GLAYEGLVKEAREMMAELCSRGVV 534



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 201/448 (44%), Gaps = 37/448 (8%)

Query: 281 MLCRENKLEEAIRLFKMMRALDLM-----------------------------PDELTYE 311
           +L R   LEEAIRL + M  L+                               PD ++Y 
Sbjct: 65  VLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDVMSYN 124

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            ++   C   +LD+A  ++  M    + P    +  ++RGLC  G+ D ++  L+D    
Sbjct: 125 AMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR 181

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
              P    +  LLE  C    +  A  +L++M D+  A D  ++N+ +  +C+   +  A
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA 241

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            E L  +      P+  +Y+  + G C    +EDA ++  ++S +    + ++++ L+  
Sbjct: 242 MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+   +  A+E+   + K GC+ +S S+N +++  C  +K+D+A+    L  SSG    
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             +Y  ++  L +       + +L Q+  +GC   + +Y  +I  +++  K ++     N
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            MV  GL PD  T  ++  GL    ++        K+       ++ +YN ++ GL K  
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRR 481

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
            T  A  L   M+  G +P+ +T+ +L+
Sbjct: 482 ATHSAIDLFTYMVSNGCMPNESTYTILI 509



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 128/259 (49%), Gaps = 5/259 (1%)

Query: 113 EEMEGLCQNMVKE-RYPNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           E+ E L   M ++ R PNV     +++ SF+     V  AM +L  +   G   +   +N
Sbjct: 274 EDAEKLMAEMSRKGRPPNV--VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            +L A  ++K+      FV + MV +G  P++ + N LL  L     +++A++   ++  
Sbjct: 332 PILHAFCKQKKMDRAMAFV-ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           KGC P   ++  VI GL    + ++++ +L EM   G+Q ++  Y+ I   LCRE ++EE
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEE 450

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           AI+ F  ++ + + P+ + Y  ++  LC+      A D+   M+  G  P +  +  ++ 
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510

Query: 351 GLCEVGKFDESVNFLEDKC 369
           GL   G   E+   + + C
Sbjct: 511 GLAYEGLVKEAREMMAELC 529



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 16/312 (5%)

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK-CKLCNYEDALRVFRQVSAQS 472
           +R L    ++ +A  L+  M  + + P  A   A ++ K C      +A RV       S
Sbjct: 63  LRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVL-----AS 115

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
              D +SY+ +V G C   ++  A  +   M        + ++N LI GLC   + D A+
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEP---DTYTYNTLIRGLCGRGRTDNAL 172

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            +       G      TYT ++    K    K  + +L +M  +GCA D+  Y +++  +
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            ++ ++ D   F   +   G  P+  +   +L GL    +       + ++       + 
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF--- 709
             +N+LI+ L + GL   A  +LD +   G  P++ ++  ++ +   ++   R  AF   
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 352

Query: 710 --DSSSFPDSVS 719
              S  +PD VS
Sbjct: 353 MVSSGCYPDIVS 364


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 226/523 (43%), Gaps = 58/523 (11%)

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
            M+K  Y   R   + L+     + + + A+++   M   G   +  ++ ++L  + + K
Sbjct: 191 QMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAK 250

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R   D   +   M  +G  P+  T N LL+   +  +I+ A    +   K+G     + +
Sbjct: 251 RT-DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGY 309

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I GL    R D+      +MF  GI+ ++  YT +I   C    ++ A+ +   M  
Sbjct: 310 SSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQ 369

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             L PD   Y  LI   C+   LD A  +  ++      PT   +  ++ G+C  G  DE
Sbjct: 370 RGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDE 429

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM---------------AD 401
           +            SP     NAL++  C AG+   A+ +  KM               AD
Sbjct: 430 ARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGAD 489

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           R + D  S    +  LCE+  I KAY+LL ++  S VVPD  TY+  + G CK  N   A
Sbjct: 490 R-VMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGA 548

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
            ++FR++  +    DS++Y  L++G  +V++  +A  V   M KNGC+ SS+ +  L+  
Sbjct: 549 FKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTW 608

Query: 522 LCVMRKV------------------DKAIRLRSLAYSSG----------------TSYTT 547
            C   K+                  D+ ++L    +  G                 ++  
Sbjct: 609 SCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEI 668

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV-EAYCILI 589
           + YT  ++GL + +R+++ L +   ++++ C +DV    C+++
Sbjct: 669 APYTIWLIGLCQARRSEEALKIF--LVLKECQMDVNPPSCVML 709



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 123/533 (23%), Positives = 238/533 (44%), Gaps = 28/533 (5%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N+V+  + ++  GF  +  + +E+  + I     T + L+    ++   E A++ F +M 
Sbjct: 100 NLVIDMLAKDD-GFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             GC P+  T+  ++  ++       ++++  +M  L      + +  ++  LC+  K +
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A+++F  M    + P+ + Y  +++ LC+  R DD + +L  M V G  P       ++
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 350 RGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI- 404
            G C++G+ DE+   L+  +K GYV     +++L++    A ++   +    KM    I 
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D   + I IR  CE   +  A  +L  M    + PD   Y+A + G C +   + A  +
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             ++S       S +Y+ L+ G+C+   + EA ++F  M   GCS S  +FN LI GLC 
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             ++++A   R L Y        S + ++  G  ++     L  ++ ++   G  L ++A
Sbjct: 459 AGELEEA---RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESG--LILKA 513

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y +L+Q                 +  +G+VPD  T   L++G      ++       +L 
Sbjct: 514 YKLLMQ-----------------LADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQ 556

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
                 DS  Y  LI+G  +      A  +LD M+  G  P +  +  L+  S
Sbjct: 557 LKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWS 609



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 219/521 (42%), Gaps = 28/521 (5%)

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +V+ E  R E     F    ++    +  T  +VI  L  +   D    IL E+ +  IQ
Sbjct: 69  DVMREQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQ 128

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
           +    ++ +I    +    E+A+  F  M+     PD  TY  +++ + +      A  +
Sbjct: 129 IPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAV 188

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
              M+ +   P    FV ++ GLC+ GK D+++   ++       P    +  +L   C 
Sbjct: 189 YNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQ 248

Query: 386 AGKFFLAKCILEKMADRKIADC--DSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
           A +      +L  M   K++ C  DS   N  +   C+  +I +A+ LL        V  
Sbjct: 249 AKRTDDVHRLLNTM---KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLG 305

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              YS+ + G  +   Y++     R++    +  D + Y+ L+ G C+V  +  A+ +  
Sbjct: 306 IKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLN 365

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-TYTKIMLGLVKL 560
            M++ G S  +  +N LI G C +  +DKA  L+ L  S    + TS TYT ++ G+ + 
Sbjct: 366 DMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQ-LEISKNDCFPTSCTYTILICGMCRN 424

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL-------------KDCALFFNV 607
               +   +  QM   GC+  +  +  LI  + +  +L             K+ +LF  +
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRL 484

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
              A  V D  ++ +++  L +   +      + +L     V D   YN+LING  K   
Sbjct: 485 SQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKN 544

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRR 706
            + A  L   +  KG  PD+ T+G L+     V  E D+ R
Sbjct: 545 INGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 1/306 (0%)

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++N  +  + + E    A  +  +M+  +  P+ AT+   + G CK    +DAL++
Sbjct: 164 PDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKM 223

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F +++ + +  +++ Y+ ++ GLCQ ++  +   +   M  +GC   S + N L+ G C 
Sbjct: 224 FDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCK 283

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
           + ++D+A  L  L    G       Y+ ++ GL + +R  ++     +M   G   DV  
Sbjct: 284 LGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVL 343

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y ILI+   E   +       N M + GL PD     +L+ G  D   L    S   ++ 
Sbjct: 344 YTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEIS 403

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEID 703
            +     S  Y ILI G+ + GL  +A  + + M   G  P   T   L+ G     E++
Sbjct: 404 KNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463

Query: 704 SRRFAF 709
             R  F
Sbjct: 464 EARHLF 469



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 109/523 (20%), Positives = 208/523 (39%), Gaps = 62/523 (11%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D +CK+       G ++E   L Q   KE Y    +   SL+       R +        
Sbjct: 279 DGFCKL-------GQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRK 331

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M   G +  V ++ +++    E   G  D+   +  +M + G+ P+    N L++   + 
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEV--GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDV 389

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             ++ A      + K  C P S T+ I+I G+  N  +D++  I  +M +LG    +  +
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTF 449

Query: 276 TCIIPMLCRENKLEEAIRLFKMM-----------------RALD---------------- 302
             +I  LC+  +LEEA  LF  M                 R +D                
Sbjct: 450 NALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGL 509

Query: 303 ---------------LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
                          ++PD +TY  LIN  C+   ++ A  +  ++ + G +P    +  
Sbjct: 510 ILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGT 569

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC----CCNAGKFFLAKCILEKMADRK 403
           ++ G   V + +++   L+       +P +A+ +C     C  GK  +A  +  K     
Sbjct: 570 LIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSL 629

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
            +  D          E  E+ KA   L  M       + A Y+ +++G C+    E+AL+
Sbjct: 630 PSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALK 689

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +F  +    + ++  S   L+ GLC+   +  AV++F    + G  L     N L+  L 
Sbjct: 690 IFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLI 749

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           +  K+  A+ L +   S+G       + +I   L+ + +A+++
Sbjct: 750 LQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQEM 792


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 153/692 (22%), Positives = 290/692 (41%), Gaps = 66/692 (9%)

Query: 40  DMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNT-NDLSSALKIFKWVSIQKRFQHTADT 98
           D+++  Q+        S+   L P H+ +VL NT +D   AL+ F ++ + K   H+  +
Sbjct: 46  DIVRGKQSWKVAFNDASISSTLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTS 105

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS-FVNHYRVNGAMRVLVNM 157
           Y  M+  L  +        L   ++      +RE+    VFS F++ Y+     R   + 
Sbjct: 106 YAIMVHALVHSRLFWPANSLLHTLL------LRESHPKCVFSHFLDSYK-----RCKFSS 154

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
             G        FN+++   V   R F D V + K M    ++P V TL+ LL  L +  +
Sbjct: 155 TLG--------FNLLVQNYVLSSRIF-DAVVIVKLMFANNLLPEVRTLSALLNGLLKVRK 205

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
             +  + F      G  P+  T   V++ +        +   +  M   G  L +  Y  
Sbjct: 206 FITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNV 265

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LC+ +++ EA+ + + +    L  D +TY  L+   C   + +    ++++M+ +G
Sbjct: 266 LIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELG 325

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
            +PT+     +V GL + GK D++                   E     G+F        
Sbjct: 326 FSPTEAAVSGLVDGLRKQGKIDDAY------------------ELVVKVGRFGF------ 361

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                 + +   +N  I  LC+  ++ KA  L   M + ++ P+  TYS  +   C+   
Sbjct: 362 ------VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGR 415

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A+  F ++    +     +Y+ L+ G C+   ++ A  +F  M+  G   ++++F  
Sbjct: 416 LDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTS 475

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQML 574
           LI G C   +V KA +L +    +G +    T+T ++ GL    K+  A +L   L +  
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           ++   +    Y +LI+      K+         M + GLVPD  T   L+ GL    ++ 
Sbjct: 536 IKPTEV---TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                I+ L   +  L+   Y+ L++G  +EG   +A      M+ +G   D   H +L+
Sbjct: 593 KAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652

Query: 695 GSSVGEEIDSRRFAFDSSSFPDSVSDILAEGL 726
             ++ +         D  +F D + D+  +GL
Sbjct: 653 DGALKQP--------DRKTFFDLLKDMHDQGL 676



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/543 (21%), Positives = 236/543 (43%), Gaps = 7/543 (1%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M + GF LS+  +NV++  + +  R  ++ V V + +   G+  +V T   L+       
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDR-VSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQ 309

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           + E+ +     M + G  P       ++ GL    ++DD+  ++ ++   G    L  Y 
Sbjct: 310 QFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYN 369

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC+   L++A  L+  M  ++L P+ +TY  LI+  C + RLD A    + MI  
Sbjct: 370 ALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQD 429

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
           G+  T   +  ++ G C+ G    + +   +       P      +L+   C   +   A
Sbjct: 430 GIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKA 489

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +  KM D  I  +  ++   I  LC   ++ +A EL   +V   + P   TY+  + G
Sbjct: 490 FKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEG 549

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+    + A  +   +  + LV D+ +Y  L+ GLC   ++++A +    + K    L+
Sbjct: 550 YCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN 609

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              ++ L++G C   ++ +A+         G +     +  ++ G +K    K    +L 
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M  +G   D   Y  +I + S++   K     +++MV     P+  T  +L++GL    
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAG 729

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           ++        ++ + +   +S  Y   ++ L KEG   +A  L   ML KG + +  TH 
Sbjct: 730 EMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHN 788

Query: 692 LLV 694
           +++
Sbjct: 789 III 791



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 145/630 (23%), Positives = 249/630 (39%), Gaps = 79/630 (12%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TYC ++L        E    L   MV+  +     A+  LV       +++ A  ++V +
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV 356

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
              GF  ++ V+N ++ ++   K G  D    +Y  M    + PN  T + L++    + 
Sbjct: 357 GRFGFVPNLFVYNALINSLC--KGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSG 414

Query: 217 RIESALDQFRRM-----------------------------------HKKGCCPNSRTFE 241
           R++ A+  F RM                                     KG  P + TF 
Sbjct: 415 RLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFT 474

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I G   + +V  +  +  +M D GI   +  +T +I  LC  NK+ EA  LF  +   
Sbjct: 475 SLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER 534

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            + P E+TY  LI   C + ++D A ++LEDM   GL P    +  ++ GLC  G+  ++
Sbjct: 535 KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA 594

Query: 362 VNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            +F++D            ++ALL   C  G+   A     +M  R I  D     + I  
Sbjct: 595 KDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDG 654

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
             +  + +  ++LL  M    + PD   Y++ +    K  +++ A   +  +  +    +
Sbjct: 655 ALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN 714

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++Y+ L+ GLC+  ++  A  +F  M       +S ++   +  L     + +AI L  
Sbjct: 715 VVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHH 774

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
            A   G    T T+  I+ G  KL R  +   VL++M   G   D   Y  LI       
Sbjct: 775 -AMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSG 833

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            +      ++ M+  GL PD                          LV+         YN
Sbjct: 834 NVGASVKLWDTMLNRGLEPD--------------------------LVA---------YN 858

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           +LI G    G   +A  L D ML +G +PD
Sbjct: 859 LLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/460 (21%), Positives = 200/460 (43%), Gaps = 21/460 (4%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           IQ     T   Y  +I      G++   E L   M  +          SL+  +    +V
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
             A ++   M   G   +V  F  ++  +    +  A+   ++ E+V+  I P   T N 
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK-MAEASELFDELVERKIKPTEVTYNV 545

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L+E      +I+ A +    MH+KG  P++ T+  +I GL +  RV  +   + ++    
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++L    Y+ ++   C+E +L EA+     M    +  D + +  LI+   +        
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFF 665

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECC 383
           D+L+DM   GL P + ++  ++    + G F ++       + ++C      + AL+   
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIP---IRWLCENEEIRKAYEL-----LGRMVV 435
           C AG+   A  + ++M         + N+P   I + C  + + K   +     L   ++
Sbjct: 726 CKAGEMDRAGLLFKRM--------QAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML 777

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             ++ +  T++  + G CKL  + +A +V  +++   +  D ++YS L+   C+   +  
Sbjct: 778 KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +V+++  M   G      ++N+LIYG CV  ++DKA  LR
Sbjct: 838 SVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELR 877



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 182/387 (47%), Gaps = 20/387 (5%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L +TN ++ A ++F  + ++++ + T  TY  +I      G +++   L ++M ++
Sbjct: 511 LISGLCSTNKMAEASELFDEL-VERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK 569

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                      L+    +  RV+ A   + +++    KL+   ++ +L    +E R   +
Sbjct: 570 GLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR-LME 628

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            +    EM++ GI  ++     L++   +    ++  D  + MH +G  P++    ++  
Sbjct: 629 ALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDN----VIYT 684

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLE----LSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I     + S     E +DL +  E    +  YT ++  LC+  +++ A  LFK M+A 
Sbjct: 685 SMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAA 744

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMI--VIGLTPTDDVFVDIVRGLCEVGKFD 359
           ++ P+ +TY   ++ L +   + +A  +   M+  ++  T T ++   I+RG C++G+F 
Sbjct: 745 NVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNI---IIRGFCKLGRFH 801

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E+   L +       P    ++ L+   C +G    +  + + M +R +  D  ++N+ I
Sbjct: 802 EATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLI 861

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPD 441
              C N E+ KA+EL   M+   ++PD
Sbjct: 862 YGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 1/189 (0%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV     PNV T   L+  L +   ++ A   F+RM      PNS T+   +  L     
Sbjct: 706 MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGN 765

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + +++ +   M   G+      +  II   C+  +  EA ++   M    + PD +TY  
Sbjct: 766 MKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYST 824

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI   C +  +  +  + + M+  GL P    +  ++ G C  G+ D++    +D     
Sbjct: 825 LIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884

Query: 373 TSPHNALLE 381
             P N  L+
Sbjct: 885 IIPDNKYLQ 893


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 212/466 (45%), Gaps = 11/466 (2%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           + N LL  L +          +++MH  G  PN  T  I+I  L   +RV + +S +  +
Sbjct: 93  SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGI 152

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G   ++  YT +I  LC E+++ EA RLF  M+ L   P+ +TY  LI  LC    +
Sbjct: 153 MRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNI 212

Query: 324 DDANDILEDMI------VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
           + A  + ++M+       I   P    +  I+  LC++GK+ E+     +       P  
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDV 272

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
              +AL++  C  G    AK  LE M  R I  D  ++   I   C   ++  A EL   
Sbjct: 273 VTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLS 332

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M      PD  +Y+  + G CK  N E+A++++ ++       D  ++  L++GL    K
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + +A ++F  +  +    +    ++ + GLC    + +A+ L +   S        ++  
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ GL K ++ +    +  ++  EG   DV  YCI+I    +  ++ +  + F +M + G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
             P+  T  +LLHG    ++L  V   ++K++     L +S+Y I+
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 216/482 (44%), Gaps = 47/482 (9%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+  FN++LGA+ + K  ++    +YK+M  AG+ PN  TLN L+  L   NR+   L  
Sbjct: 90  SIISFNLLLGALAKIKH-YSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSA 148

Query: 225 -----------------------------------FRRMHKKGCCPNSRTFEIVIKGLIA 249
                                              F RM K GC PN  T+  +IKGL  
Sbjct: 149 MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCR 208

Query: 250 NSRVDDSVSILGEM------FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
              ++ ++ +  EM      + +  +  +  Y  II  LC+  K +EA RLF  M    +
Sbjct: 209 TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 268

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD +T+  LI+ LC+   + +A   LE M++ G+ P    F  ++ G C VG  D +  
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 328

Query: 364 FLEDKCGYVTSP----HNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLC 418
                      P    +  L+   C       A K   E +   K  D  ++ + ++ L 
Sbjct: 329 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 388

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
              ++  A +L G +   +V  +    S F+ G CK     +A+ +F ++ + ++ LD  
Sbjct: 389 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 448

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           S++ L++GLC+  K+  A E+F  +S+ G      ++ I+I G C   +VD A  L  + 
Sbjct: 449 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 508

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +G +    TY+ ++ G  K  + ++++ +L +M+ +  +L    Y I+   +S+  K 
Sbjct: 509 EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKC 568

Query: 599 KD 600
           ++
Sbjct: 569 RE 570



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 223/520 (42%), Gaps = 59/520 (11%)

Query: 200 PNVDTLNYL--LEVLFETNRIESALDQFRRMHKKGCCPNSRT---FEIVIKGLIANSRVD 254
           P + + N+   L  L E   ++  L  F    KKG   +++    F+++++ +I+ + + 
Sbjct: 39  PQISSANHPKSLHALSERISLQHGLPMFIHNCKKGNITSTQALQFFDLMMRSIISFNLLL 98

Query: 255 DSVSIL---GEMFDLGIQLELS-----FYT--CIIPMLCRENKLEEAIRLFKMMRALDLM 304
            +++ +    ++F L  ++ L+     F+T   +I  LC  N++ E +     +     +
Sbjct: 99  GALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYI 158

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +TY  LI  LC   R+ +A  +   M  +G  P    +  +++GLC  G  + ++  
Sbjct: 159 PDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKL 218

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
            ++     TSP+       C    F                   S+NI I  LC+  + +
Sbjct: 219 HQEMLN-GTSPY----AINCKPNIF-------------------SYNIIIDELCKIGKWK 254

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  L   MV   V PD  T+SA +   CK     +A +    +  + +V D  +++ L+
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           EG C V  +  A E+F  M   G      S+ +LIYG C    V++A++L +     G  
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 545 YTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEG----CALDVEAYC---ILIQSMSE 594
               T+  ++ GL    K+  AK L  V+    V      C++ ++  C    L ++M  
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            N+LK     +N+ +      D E+   L+ GL    +L        KL  +    D   
Sbjct: 435 FNELKS----YNMKL------DIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVT 484

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           Y I+ING  K G    A+ L  +M   G  P+  T+  L+
Sbjct: 485 YCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALL 524



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 9/294 (3%)

Query: 81  KIFKWVSIQKRFQHTAD--------TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
           KI KW   ++ F    D        T+  +I  L   G V E +   + M+         
Sbjct: 249 KIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLF 308

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
              SL+  F     ++ A  + ++M S G++  V  + V++    +      + + +Y E
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT-FNVEEAMKLYNE 367

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G  P++ T   LL+ LF   ++  A   F  +       N     + + GL  N  
Sbjct: 368 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 427

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + +++ +  E+    ++L++  + C+I  LC+  KLE A  LF+ +    L PD +TY  
Sbjct: 428 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           +IN  C+N ++D+AN + + M   G TP    +  ++ G  +  K +E V  L 
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLH 541


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 154/647 (23%), Positives = 272/647 (42%), Gaps = 101/647 (15%)

Query: 58  RHNLSPDHLIRVLDN----TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           R +LS  +++++L++    + D + AL  F+W       +HT ++ C MI  L ++GN+ 
Sbjct: 55  RIDLSQFNVMKILNDLFEESTDAALALYFFRWSEYCMGSKHTVESVCTMIHIL-VSGNMN 113

Query: 114 E------MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
                  +  +  N  +E + N+          F+  +  +   RVL             
Sbjct: 114 HKAMDLLLHLISYNSGEEGWHNI----------FLKIHETHTKRRVLET----------- 152

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V+ +++   V+E         + K M    I P +   N LL+ L E+ ++  A D  + 
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICK-MRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKE 211

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +G   N+    + I G  +   +D    +L EM  LGI+ ++  YT +I  LC+ + 
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA  +   M  + +  D ++   +++  C+  + ++A D+LE   V  L+P   VF  
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLE---VFNLSPNIFVFNS 328

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
            +  LC  G   ++    +D C     P                              DC
Sbjct: 329 FISKLCTDGNMLKAAKVFQDMCEMGLIP------------------------------DC 358

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S+   +   C+ ++I  A + LG+M+   + P  ATY+  +   CK  N E A  +F++
Sbjct: 359 FSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQR 418

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  + LV D +SY+ L+ G  +   + +A E+   M   G S    ++NILI+GL     
Sbjct: 419 MITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGL----- 473

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
                                    I  GLV    AKD+L  L +    G + DV  +  
Sbjct: 474 -------------------------IKRGLV--NEAKDILDELTR---RGFSPDVVTFTN 503

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I   S +   ++  L F  M +  L PD  T  +LL+G      +   +   +K++   
Sbjct: 504 IIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAG 563

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              D  +YN LI+G    G    A +L+ +M+  G +P+  TH  LV
Sbjct: 564 LKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALV 610



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 4/321 (1%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N+LL+    + +  LA   L++M  + +  +    ++ I   C    I   ++LL  M  
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKY 249

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + PD   Y+  +   CK+   ++A  +  +++   + LDS+S S +V+G C+V K  E
Sbjct: 250 LGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEE 309

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A++V    +    S +   FN  I  LC    + KA ++       G      +YT +M 
Sbjct: 310 AMDVLEVFN---LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMA 366

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K++   + L  L +ML  G    V  Y +LI S  +   ++     F  M+  GLVP
Sbjct: 367 GYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVP 426

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  +  +L++G      L      ++ + S     D   YNILI+GL K GL ++A  +L
Sbjct: 427 DVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDIL 486

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
           D +  +G+ PD  T   ++G 
Sbjct: 487 DELTRRGFSPDVVTFTNIIGG 507


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 148/651 (22%), Positives = 280/651 (43%), Gaps = 75/651 (11%)

Query: 51  EAKIQSLRHNLSPDHLIRVL--DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           EA+++ L   LSP  +  VL      D+  A + F+W   Q R++H  + + +M+  L  
Sbjct: 80  EAQLRQLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSN 139

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
               +    + + M++       E    L+ S+    ++  AMRVL  M           
Sbjct: 140 TRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQ---------- 189

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
                                     K G  P++   N  + VL    R++ AL+   RM
Sbjct: 190 --------------------------KDGCAPDISICNMAVNVLVVAGRVDKALEFAERM 223

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE-LSFYTCIIPMLCRENK 287
            + G  P+  T+  +IKGL    RV D++ ++G M   G   + +S+YT ++  LC+E +
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYT-VMSFLCKEKR 282

Query: 288 LEEAIRLFKMMRA-LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +EE   L + MR    L PD++TY  LI+ L ++   D+A + L +              
Sbjct: 283 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE-------------- 328

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-A 405
                        E   F  D+ GY     +A++   C  G+   AK I+ +M  +    
Sbjct: 329 ------------SEGKRFRVDEVGY-----SAIVHSFCLNGRMAEAKEIVGEMISKGCQP 371

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  +++  +   C   E+ +A +++  M  +   P+  T++A + G CK+    +A  + 
Sbjct: 372 DVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELL 431

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            +   +      I+YS ++ G  +  K+ E+ +V   M + G   ++   N+LI+ LC  
Sbjct: 432 NKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKD 491

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           RK  +A        S G +     +T ++ G  +    +  L ++  M +     DV  Y
Sbjct: 492 RKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTY 551

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            +++ ++ ++ +LK+       M+  G++P   T  +++H   +   L  + + + K+++
Sbjct: 552 TVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLA 611

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             E+   S YN ++  L   G  ++A  LL  +L    V DA T  +L+ S
Sbjct: 612 RQEM--KSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMES 660


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 272/638 (42%), Gaps = 30/638 (4%)

Query: 75  DLSSALKIFKWVSIQ-KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER---YPNV 130
           DL   LK    VS     F+H++ +   M+  L     + E +     MV++       V
Sbjct: 113 DLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKV 172

Query: 131 REALIS--------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
            E+LIS              LV ++V   ++         +   G  +S++  N +LG +
Sbjct: 173 VESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGL 232

Query: 177 VEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
           V  + G+ D  + +Y E+V+ GI  NV TLN ++  L +  + E+ +     M  KG   
Sbjct: 233 V--RTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFA 290

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           +  T+  +I        V+++  +L      G++  L  Y  I+  LC+  K + A  + 
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M  L L P+  TY  L+  +C    + +A +I ++M   G+ P    F  ++  L   
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410

Query: 356 GKFDESV-NFLE-DKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRK-IADCD 408
           G   +++ +F E ++ G V  P N     L++  C  G    A  + ++M  R    D  
Sbjct: 411 GHLYQALMHFREMERSGIV--PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  +  LC+ +    A  L   MV   +VPD  T++  + G CK  N + AL +F  +
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
              +L  D ++Y+ L++G C+  ++  A E++  M +        S+  ++ G C    +
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
            +A+ L       G      T   ++ G  +          L++M+  G   D  +Y  L
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I    ++  L+   +  N M K GL  +  T   +L+G     ++      + K++    
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGI 708

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
             D + Y+ LING   +    +A    D ML +G VPD
Sbjct: 709 NPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 185/427 (43%), Gaps = 9/427 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++    +  KL E    F+++R   +        +L+  L     +D A +I  +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG------YVTSPHNALLECCCNAGK 388
             G+         +V  LC+  KF+  + FL D  G       VT  +N L+   C  G 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVT--YNTLINAYCREGL 307

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +L   + R +     ++N  +  LC+  +  +A ++L  M+   + P+ ATY+ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            ++  C+  N  +A  +F ++S + ++ D +S+S L+  L +   + +A+  F  M ++G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
               +  + ILI G C    +  A+++R    + G      TY   + GL K +   D  
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           ++  +M+  G   D   +  LI+   +   +      F  MV+  L PD+ T  +L+ G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               ++       + ++    + D   Y  ++NG    GL  +A  L D ML KG  P+ 
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 688 TTHGLLV 694
            T   L+
Sbjct: 608 VTCNTLI 614



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 76/151 (50%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M++ GI PN+ T N L++    +  +  A +   +M   G  P+S ++  +I G +  +
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            ++ +  ++ EM   G+Q  +  Y  I+   C E K++EA ++ + M  + + PD  TY 
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            LIN       + +A    ++M+  GL P D
Sbjct: 717 SLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 208/487 (42%), Gaps = 75/487 (15%)

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
           C PN+ ++  ++K L    ++D + S + EM    +  ++  Y  +I  LC+  ++  AI
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
             F+ M      PD +TY  L+  LC+N R+  A  +   M   G+TP+D  +  ++   
Sbjct: 66  EFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121

Query: 353 CEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWN 411
           C++ +F+ +                                 +L+ MA RK +    S+ 
Sbjct: 122 CKMCQFETAYG-------------------------------LLQLMASRKCSPTVYSYC 150

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC---KLCNYEDALRVFRQV 468
             I  LC+N ++ +AY+L   M ++   PD  TY+  + G C   +L   +D L V  + 
Sbjct: 151 SIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVEN 210

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           S Q    D I+++ L+EGLC  ++I EA  +F  M+K GC+    +  +L+  LC+ RK+
Sbjct: 211 SFQP---DKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKL 267

Query: 529 ---------------------------------DKAIRLRSLAYSSGTSYTTSTYTKIML 555
                                            D+A RL       G +    TYT    
Sbjct: 268 RPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFK 327

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL   +          +ML +G   D+ AY +L+    + N+L         M ++GL P
Sbjct: 328 GLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPP 387

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  +L+       ++  +   ++ +VS     D + ++ L+ GL++ G    A   L
Sbjct: 388 NIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFL 447

Query: 676 DLMLGKG 682
           +L + +G
Sbjct: 448 NLAMSQG 454



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 180/415 (43%), Gaps = 58/415 (13%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM +  +VP+V T N +++ L +  RI  A++ F  M +    P+  T+  ++ GL  N 
Sbjct: 35  EMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNG 90

Query: 252 RVDDSVSILGEMFDLGI------------------QLELSF-----------------YT 276
           RV  + S+ G M   GI                  Q E ++                 Y 
Sbjct: 91  RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYC 150

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            II  LC+  K+++A +LF+ M+     PD +TY  LI+ LC   RL +A D+L  M+  
Sbjct: 151 SIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVEN 210

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
              P    F  ++ GLC   +  E+    +       +P    H  L+   C   K   A
Sbjct: 211 SFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPA 270

Query: 393 KCILEKMADRKIADCDSWNI---PI-RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             ++     R    C    I   PI R L       +A  LL +M    V P+  TY+AF
Sbjct: 271 LSVV-----RNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAF 325

Query: 449 VLGKCKLCNYEDALRV---FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
             G   L ++++ +R    FR++  Q +  D ++Y+ LV+G C+  ++  A ++   M +
Sbjct: 326 FKG---LGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQ 382

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
           +G   +  ++N L+   C   KV+    L     S G     +T++ ++ GL ++
Sbjct: 383 SGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRV 437



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/427 (21%), Positives = 169/427 (39%), Gaps = 67/427 (15%)

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           D  P+ L+Y  L+  LC   ++D A   + +M    L P    +  ++  LC+  +   +
Sbjct: 5   DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA 64

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
           + F E      T P                              D  ++N  +  LC+N 
Sbjct: 65  IEFFE------TMPE----------------------------PDVVTYNTLLGGLCKNG 90

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + +A  L G M  + + P   TY+  +   CK+C +E A  + + ++++       SY 
Sbjct: 91  RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYC 150

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++ GLC+  K+ +A ++F  M   GC     ++N LI+GLCV +++ +A  L ++   +
Sbjct: 151 SIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVEN 210

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD- 600
                  T+T ++ GL    R K+  V+   M  +GCA D+  + +L+  +  + KL+  
Sbjct: 211 SFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPA 270

Query: 601 --------------------------------CALFFNVMVKAGLVPDRETMLSLLHGLA 628
                                            A     M + G+ P+  T  +   GL 
Sbjct: 271 LSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLG 330

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
           D  +         +++      D   YN+L++G  K      A  ++  M   G  P+  
Sbjct: 331 DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIV 390

Query: 689 THGLLVG 695
           T+  LVG
Sbjct: 391 TYNTLVG 397



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 200/464 (43%), Gaps = 30/464 (6%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSF-------VNHY 145
           +  A +YC ++  L   G +++       M        RE L+  VF++           
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMA-------REKLVPDVFTYNVVIDTLCKAR 59

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++ A+     M     +  V  +N +LG + +  R  A    ++  M  AGI P+  T 
Sbjct: 60  RISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR-VAQACSLFGSMEGAGITPSDVTY 114

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++V  +  + E+A    + M  + C P   ++  +I GL  N +VD +  +  EM  
Sbjct: 115 TTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKL 174

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G + +   Y  +I  LC + +L EA  L  +M      PD++T+  LI  LC   R+ +
Sbjct: 175 AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKE 234

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL----- 380
           A  + + M   G  P       +V  LC   K   +++ + +   Y   P   +L     
Sbjct: 235 AFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRN---YPACPEAVILYTPIF 291

Query: 381 -ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
            E     G F  A  +L+KMA R +A +  ++    + L + +E  +AY    RM+   +
Sbjct: 292 RELGRRRG-FDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGI 350

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD   Y+  V G CK    + A ++ R +    L  + ++Y+ LV   C+  K+    E
Sbjct: 351 EPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGE 410

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +   M   G     ++++ L+ GL  + +VD A    +LA S G
Sbjct: 411 LLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 31/258 (12%)

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           + +Q    +++SY  LV+ LC+  KI +A      M++        ++N++I  LC  R+
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 528 VDKAIRLRS-------LAYSS----------------------GTSYTTS--TYTKIMLG 556
           + +AI           + Y++                      G   T S  TYT ++  
Sbjct: 61  ISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDV 120

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
             K+ + +    +L  M    C+  V +YC +I  + +  K+      F  M  AG  PD
Sbjct: 121 FCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPD 180

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
           R T  +L+HGL    +LH     +  +V +S   D   +  LI GL       +A  L  
Sbjct: 181 RVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQ 240

Query: 677 LMLGKGWVPDATTHGLLV 694
            M  +G  PD  TH +LV
Sbjct: 241 GMAKQGCAPDLVTHTVLV 258


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 148/651 (22%), Positives = 280/651 (43%), Gaps = 75/651 (11%)

Query: 51  EAKIQSLRHNLSPDHLIRVL--DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL 108
           EA+++ L   LSP  +  VL      D+  A + F+W   Q R++H  + + +M+  L  
Sbjct: 80  EAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSN 139

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
               +    + + M++       E    L+ S+    ++  AMRVL  M           
Sbjct: 140 TRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQ---------- 189

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
                                     K G  P++   N  + VL    R++ AL+   RM
Sbjct: 190 --------------------------KDGCAPDISICNMAVNVLVVAGRVDKALEFAERM 223

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE-LSFYTCIIPMLCRENK 287
            + G  P+  T+  +IKGL    RV D++ ++G M   G   + +S+YT ++  LC+E +
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYT-VMSFLCKEKR 282

Query: 288 LEEAIRLFKMMRA-LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +EE   L + MR    L PD++TY  LI+ L ++   D+A + L +              
Sbjct: 283 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE-------------- 328

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-A 405
                        E   F  D+ GY     +A++   C  G+   AK I+ +M  +    
Sbjct: 329 ------------SEGKRFRVDEVGY-----SAIVHSFCLNGRMAEAKEIVGEMISKGCQP 371

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  +++  +   C   E+ +A +++  M  +   P+  T++A + G CK+    +A  + 
Sbjct: 372 DVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELL 431

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            +   +      I+YS ++ G  +  K+ E+ +V   M + G   ++   N+LI+ LC  
Sbjct: 432 NKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKD 491

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           RK  +A        S G +     +T ++ G  +    +  L ++  M +     DV  Y
Sbjct: 492 RKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTY 551

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            +++ ++ ++ +LK+       M+  G++P   T  +++H   +   L  + + + K+++
Sbjct: 552 TVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLA 611

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             E+   S YN ++  L   G  ++A  LL  +L    V DA T  +L+ S
Sbjct: 612 RQEM--KSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMES 660


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 252/562 (44%), Gaps = 47/562 (8%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V+N +L A ++E R F     +YK+++ +G  P+V T N LL+ L    R+E A   F  
Sbjct: 117 VYNRLLLAALQEAR-FDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDA 175

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M ++    N  +F I+ +G     R  D++ +L  M      + L     ++   CRE +
Sbjct: 176 MPER----NEFSFGILARGYCRAGRSMDALGVLDSM----PTMNLVVCNTVVAGFCREGQ 227

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM---IVIGLTPTDDV 344
           ++EA RL + MR   L P+ +T+   I+ LC+  R+ DA  I  DM      GL   D V
Sbjct: 228 VDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQV 287

Query: 345 FVDI-VRGLCEVGKFDESVNFLE-DKCGYV---TSPHNALLECCCNAGKFFLAKCILEKM 399
             D+ + G CE G  DE+   ++  +CG        +N  L      G    A+ +L +M
Sbjct: 288 TFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREM 347

Query: 400 ADRKI-ADCDSWNIPIRWLCENE---EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           A   +  +  ++NI +  LC+     ++RK  + +   V++   PD  TY++ +   C  
Sbjct: 348 AHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMT---PDVVTYTSLLHAYCSE 404

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N   A R+  +++ +    +S +Y+ L++ L +  +ITEA  +   MS+ G SL ++S 
Sbjct: 405 GNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASC 464

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGT------SYTTS-----------------TYTK 552
           NI+I GLC   K+D A+ +    ++ G+       Y+                   TY+ 
Sbjct: 465 NIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYST 524

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++  L K  R  +    L +M+ +  + D   Y   I    +  K          M K G
Sbjct: 525 LVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKG 584

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
             P   T   L+ G  +      +   I+++       +   YN LI    + G+ ++A 
Sbjct: 585 CKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAM 644

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            LLD ML    VP+ T+  LL+
Sbjct: 645 PLLDEMLQNEIVPNITSFELLI 666



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 206/467 (44%), Gaps = 35/467 (7%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
             V +  V  A  +L  M   G + +   +N+++  + +E + F   V   ++ VK+G++
Sbjct: 330 GLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFD--VRKVEDFVKSGVM 387

Query: 200 -PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            P+V T   LL          +A      M +KGC PNS T+ ++++ L    R+ ++  
Sbjct: 388 TPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAER 447

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM---RALDL------------ 303
           +L  M + G  L+ +    II  LCR NKL+ A+ +   M    +L L            
Sbjct: 448 LLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLT 507

Query: 304 --------MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
                   +PD +TY  L++ LC+  R D+A   L +MI   ++P   ++   + G C+ 
Sbjct: 508 DSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKH 567

Query: 356 GKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSW 410
           GK   +V  L D     C   T  +N L+              ++ +M  + I  +  ++
Sbjct: 568 GKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTY 627

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I+  CE   + KA  LL  M+ + +VP+  ++   +   CK  ++  A RVF   S 
Sbjct: 628 NSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF-DASL 686

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
            +     + YS +   L    +  EA+ +   + +   S+    +  +I GLC + +VD 
Sbjct: 687 STCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDH 746

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV-VLAQMLVE 576
             RL  L    G S+  + +  ++  L   +R K   V +L+Q ++E
Sbjct: 747 GHRLLKLLMVKGYSFDPAAFMPVIDALS--ERGKKQHVDMLSQKMME 791



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 120/533 (22%), Positives = 222/533 (41%), Gaps = 37/533 (6%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG----CCPNSRTFEIVIKG 246
           + M   G+ PNV T N  +  L +  R+  A   F  M +K       P+  TF++++ G
Sbjct: 236 ERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSG 295

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 VD++  ++  M   G    +  Y   +  L R   + EA  L + M    + P+
Sbjct: 296 FCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPN 355

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFL 365
             TY  +++ LC+  +  D   + ED +  G +TP    +  ++   C  G    +   L
Sbjct: 356 SYTYNIIVDGLCKEGKAFDVRKV-EDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRIL 414

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
           ++      +P    +N LL+    AG+   A+ +LE+M+++  + D  S NI I  LC N
Sbjct: 415 DEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRN 474

Query: 421 EEIRKAYEL-----------LGRM------------VVSSVVPDCATYSAFVLGKCKLCN 457
            ++  A ++           LGR+                 +PD  TYS  V   CK   
Sbjct: 475 NKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGR 534

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           +++A +   ++  + +  DS+ Y   + G C+  K + AV+V   M K GC  S+ ++N+
Sbjct: 535 FDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNL 594

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI+G       D+ ++L S     G      TY  ++    +       + +L +ML   
Sbjct: 595 LIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNE 654

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              ++ ++ +LI++  + +        F+  +       +E + SL+          L +
Sbjct: 655 IVPNITSFELLIKAFCKTSDFSAAQRVFDASLST--CGQKEVLYSLMCTQLSTYGRWLEA 712

Query: 638 SGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             I + V +  + +    Y  +I GL K         LL L++ KG+  D   
Sbjct: 713 MNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAA 765



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 10/276 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           + +  +  H + + A++VL +M   G K S   +N+++     EK    + + +  EM  
Sbjct: 559 TFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGF-REKHNSDEILKLISEMKG 617

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            GI PNV T N L++   E   +  A+     M +    PN  +FE++IK     S    
Sbjct: 618 KGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSA 677

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +         Q E+  Y+ +   L    +  EA+ + + +  L +      Y+++I 
Sbjct: 678 AQRVFDASLSTCGQKEV-LYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIE 736

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+   +D  + +L+ ++V G +     F+ ++  L E GK  + V+ L  K   +   
Sbjct: 737 GLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGK-KQHVDMLSQKMMEMAER 795

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
            N L      +G+F   K   +K    K A+ D W+
Sbjct: 796 DNGL---AAPSGEF---KPRSQKHGQDKHAESD-WH 824



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/389 (20%), Positives = 143/389 (36%), Gaps = 73/389 (18%)

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD--IVRGLCEVGKFDESVNFLED 367
           Y  L+    +  R D    + +D+++ G  P  DVF    +++ LC  G+ + +    + 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAP--DVFTRNILLQALCAAGRMELARRVFDA 175

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                      L    C AG+   A  +L+ M    +  C   N  +   C   ++ +A 
Sbjct: 176 MPERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVC---NTVVAGFCREGQVDEAE 232

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L+ RM    + P+  T++A +   CK     DA R+F  +             K   GL
Sbjct: 233 RLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQ-----------EKWERGL 281

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            + +++T                    F++++ G C    VD+A  L  +    G     
Sbjct: 282 PRPDQVT--------------------FDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRV 321

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +Y + + GLV+     +   +L +M  EG   +   Y I++  + ++ K  D     + 
Sbjct: 322 ESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDF 381

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +    + PD  T  SLLH                                       EG 
Sbjct: 382 VKSGVMTPDVVTYTSLLHAYCS-----------------------------------EGN 406

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            + A+ +LD M  KG  P++ T+ +L+ S
Sbjct: 407 AAAANRILDEMAQKGCAPNSFTYNVLLQS 435



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 12/272 (4%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +++S   PD  T +  +   C     E A RVF  +  +    +  S+  L  G C+  +
Sbjct: 141 LLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPER----NEFSFGILARGYCRAGR 196

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
             +A+ V   M     +++    N ++ G C   +VD+A RL       G +    T+  
Sbjct: 197 SMDALGVLDSMP----TMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNA 252

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEG----CALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            +  L K  R  D   +   M  +        D   + +++    E   + +  +  ++M
Sbjct: 253 RISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIM 312

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G +   E+    L GL     +      + ++  +    +S  YNI+++GL KEG  
Sbjct: 313 RCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKA 372

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
                + D +      PD  T+  L+ +   E
Sbjct: 373 FDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSE 404


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/525 (22%), Positives = 246/525 (46%), Gaps = 9/525 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A RVL  M   G + +   +N ++         + + V V+K+M   G++P VD  N  +
Sbjct: 299 AERVLEQMVEAGTRPNSITYNSLIHGYSISGM-WNESVRVFKQMSSCGVIPTVDNCNSFI 357

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA--NSRVDDSVSILGEMFDLG 267
             LF+  R   A   F  M  KG  P+  ++  ++ G     +S + D  +I   M   G
Sbjct: 358 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 417

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I      +  +I    R   +++A+ +F+ M+   ++PD +T+  +I+ LC   RLDDA 
Sbjct: 418 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 477

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-----HNALLEC 382
                M+ IG+ P++ V+  +++G C  G+  ++   + +       P      ++++  
Sbjct: 478 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 537

Query: 383 CCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+    K I++ M    +  +  ++N  +   C    + +A+ LL  M    + P+
Sbjct: 538 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 597

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
           C  Y   V G CK    +DAL VFR +  + +   S+ YS ++ GL Q  + T A ++F 
Sbjct: 598 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 657

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M ++G ++S  ++ +++ GLC     D+A  L    ++    +   T+  ++  + K+ 
Sbjct: 658 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 717

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R ++   +   +   G   +++ Y ++I ++ ++   ++    F  + K+G   D   + 
Sbjct: 718 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 777

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            ++  L + +++   S+ ++ +  ++  L++S  ++L +   +EG
Sbjct: 778 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 822



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/580 (21%), Positives = 234/580 (40%), Gaps = 79/580 (13%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P + T N L++     +R +  L    R+ K G  P+  ++ + I G + +  VD +  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKAHCL 232

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G+  ++     II  LC+  ++++A  + + M    + PD  TY  +I+ LC+
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHN 377
           +  +D A  +LE M+  G  P    +  ++ G    G ++ESV   +    CG + +  N
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 378 --ALLECCCNAGKFFLAKCILEKM----------------------ADRKIADCDS---- 409
             + +      G+   AKCI + M                       D  +AD  +    
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 410 ------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                       +NI I        + KA  +   M    ++PD  T++  +   C++  
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 458 YEDALRVFRQ--------------------------VSAQSLVLDSIS----------YS 481
            +DAL  F                            V A+ L+ + ++          +S
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC+  ++ E  ++   M + G   +  +FN L+ G C++  +++A  L     S 
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  ++ G  K  R  D L V   ML +G       Y I++  + +  +    
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ M+++G      T   +L GL   +     +  + KL + +   D   +NI+I+ 
Sbjct: 653 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 712

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           ++K G   +A  L D +   G VP+  T+ +++ + + EE
Sbjct: 713 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 752



 Score = 45.8 bits (107), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 163 KLSVDVFNVVLGAIV-----EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           K  +  FN+V+ A+      +E +   D +  Y      G+VPN+ T + ++  L +   
Sbjct: 700 KFDIITFNIVISAMFKVGRRQEAKELFDAISTY------GLVPNIQTYSMMITNLIKEES 753

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            E A + F  + K G   +SR    +++ L+  + V  + + L  + +  + LE S  + 
Sbjct: 754 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISL 813

Query: 278 IIPMLCRENKLEEAIRLF 295
           +  +  RE K  E I+L 
Sbjct: 814 LASLFSREGKYREHIKLL 831


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 153/631 (24%), Positives = 287/631 (45%), Gaps = 30/631 (4%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----GLAGNVEEMEGLC 119
           + ++ +L +    + AL++F   + Q    HT ++ C  +L+L    G  G++ ++  L 
Sbjct: 76  ESVVHMLRSAPGPAEALELFTAAARQPTAVHTTES-CNYMLELMRAHGRVGDMAQVFDLM 134

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVLGA 175
           Q  + +   NV     + VFS V    V G +R     L  M   G  L+   +N ++  
Sbjct: 135 QKQIVK--ANV--GTFATVFSGVG---VQGGLRSAPVALPVMREAGMSLNGYTYNGLIYF 187

Query: 176 IVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
           +V  K GF A+ + VYK MV+ GI P+V T + L+    +   +++ L     M  +G  
Sbjct: 188 LV--KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVK 245

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN  ++ I I+ L   +R D++  ILG+M D G + ++  +T +I +LC   +L +A  +
Sbjct: 246 PNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDV 305

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           F  M+A D  PD +TY  L++   ++       +I   M+  G       +  +V  LC+
Sbjct: 306 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQ 365

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDS 409
           VG+ DE++   ++      SP    +N+L+     A  F  A  +   M A     +  +
Sbjct: 366 VGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYT 425

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
             + I +  ++ +  KA +    M    +VPD A  +A +    +      A RVF ++ 
Sbjct: 426 HVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELK 485

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
              +  D+I+Y+ +++   +  K  EA+  F  M + GC     + N LI  L    K +
Sbjct: 486 DMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGN 545

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A +L           T  TY  ++ GL +  + K+++ +L +M       ++  Y  ++
Sbjct: 546 EAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVL 605

Query: 590 QSMSEQNKLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLV 644
             +S+  ++ +CA+     M + G  PD  +  ++++GL    +      +       L 
Sbjct: 606 DCLSKNGEV-NCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILA 664

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
            D   L + + + + NGL KE L +   Y+L
Sbjct: 665 PDYATLCTILPSFVKNGLMKEALHTVKEYIL 695



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 147/667 (22%), Positives = 279/667 (41%), Gaps = 83/667 (12%)

Query: 141  FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVK 195
            F+N+Y  +G    A++   +M S G    V   N VL ++    R G A  VF   E+  
Sbjct: 429  FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFY--ELKD 486

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             G+ P+  T   +++   + ++ + A++ F  M + GC P+      +I  L    + ++
Sbjct: 487  MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNE 546

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  +  ++ ++ I+     Y  ++  L RE K++E + L + M      P+ +TY  +++
Sbjct: 547  AWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLD 606

Query: 316  CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----------- 364
            CL +N  ++ A  +L  M   G TP    +  ++ GL +  +F+E+              
Sbjct: 607  CLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPD 666

Query: 365  ----------------------------LEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
                                        L+  C    S  ++L+E   N      +    
Sbjct: 667  YATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFA 726

Query: 397  EKMADRKIADCDSWNIP-IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            E +A R I   D +  P IR LC++++  +A++L  +     V     +Y++ + G    
Sbjct: 727  ENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDE 786

Query: 456  CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               + A  +F ++       D  +Y+ +++ + +  +I E + V   M + G   +  ++
Sbjct: 787  NLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTY 846

Query: 516  NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            N +I GL   +++++AI L     S G S T  TY  ++ GL+K  +  D   +  +ML 
Sbjct: 847  NTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLE 906

Query: 576  EGCAL-----------------------------------DVEAYCILIQSMSEQNKLKD 600
             GC                                     D+++Y +LI ++    +L D
Sbjct: 907  YGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLND 966

Query: 601  CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               +F  +++ GL PD      L+ GL    ++       N++     V +   YN LI 
Sbjct: 967  GLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLIL 1026

Query: 661  GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSFPDSVS 719
             L K G  S+A+ + + +L KGW P+  T+  L+ G SV    D+   A+D  +   S+ 
Sbjct: 1027 HLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLK 1086

Query: 720  DILAEGL 726
              L  GL
Sbjct: 1087 TALISGL 1093



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 156/722 (21%), Positives = 288/722 (39%), Gaps = 110/722 (15%)

Query: 4    KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSP 63
            +L  + +S   I +  +  C S  S A+   ++  +DM+++    D           L+ 
Sbjct: 483  ELKDMGVSPDTITYTMMIKCCSKASKADEA-MNFFSDMVETGCVPDV----------LAL 531

Query: 64   DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            + LI  L      + A K+F  +  + + + T  TY  ++  LG  G V+E+  L + M 
Sbjct: 532  NSLIDTLYKGGKGNEAWKLFHQLK-EMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMT 590

Query: 124  KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               +P       +++     +  VN A+ +L +M   G    +  +N V+  +++E+R F
Sbjct: 591  HSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEER-F 649

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEI 242
             +   ++ +M K  + P+  TL  +L    +   ++ AL   +  + K  C  +  +F  
Sbjct: 650  EEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHS 708

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +++G++  + V+ S+     +   GI L   F   +I  LC+  K  EA +LF   + L 
Sbjct: 709  LMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 768

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +     +Y  LI  L +   +D A D+  +M  +G  P +                    
Sbjct: 769  VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDE-------------------- 808

Query: 363  NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
                                       F    IL+ M         S  I      + E 
Sbjct: 809  ---------------------------FTYNLILDAMGK-------SMRIEEMLRVQAEM 834

Query: 423  IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
             RK YE       S+ V    TY+  + G  K    E A+ ++  + ++       +Y  
Sbjct: 835  HRKGYE-------STYV----TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGP 883

Query: 483  LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
            L++GL +  K+ +A  +F  M + GC  + + +NIL+ G  +    +   ++       G
Sbjct: 884  LLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQG 943

Query: 543  TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
             +    +YT ++  L    R  D L    Q+L  G   D+  Y +LI  + +  ++++  
Sbjct: 944  INPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAV 1003

Query: 603  LFFNVMVKAGLVPDRETMLSLLHGL------ADGSQLH--LVSSG-------INKLVSDS 647
              FN M K G+VP+  T  SL+  L      ++ +Q++  L+  G        N L+   
Sbjct: 1004 CLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGY 1063

Query: 648  EVLDS---------------SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
             V  S               S+   LI+GL  E L + A  L   M  +G  PD  T+ L
Sbjct: 1064 SVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNL 1123

Query: 693  LV 694
            ++
Sbjct: 1124 IL 1125



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 120/543 (22%), Positives = 222/543 (40%), Gaps = 40/543 (7%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           V   ++ NY+LE++    R+      F  M K+    N  TF  V  G+     +  +  
Sbjct: 105 VHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPV 164

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
            L  M + G+ L    Y  +I  L +     EA+ ++K M    + P   TY  L+    
Sbjct: 165 ALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFG 224

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTS 374
           +   +D    +L +M   G+ P    +   +R L +  +FDE+   L    +  C     
Sbjct: 225 KKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVV 284

Query: 375 PHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
            H  +++  C+AG+   AK +  KM A  +  D  ++   +    ++ + +   E+   M
Sbjct: 285 THTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAM 344

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           V      +  +Y+A V   C++   ++AL VF ++  + +  +  SY+ L+ G  + +  
Sbjct: 345 VADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMF 404

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR-------------------- 533
             A+E+F  M+  G S +  +  + I       +  KAI+                    
Sbjct: 405 DRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAV 464

Query: 534 LRSLAYSS---------------GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           L SLA S                G S  T TYT ++    K  +A + +   + M+  GC
Sbjct: 465 LSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGC 524

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV A   LI ++ +  K  +    F+ + +  + P   T  +LL GL    ++  V  
Sbjct: 525 VPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMH 584

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            + ++       +   YN +++ L K G  + A  +L  M  KG  PD +++  ++   +
Sbjct: 585 LLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLI 644

Query: 699 GEE 701
            EE
Sbjct: 645 KEE 647



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 94/426 (22%), Positives = 185/426 (43%), Gaps = 10/426 (2%)

Query: 180  KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            K G    +   + +   GI+ N   L  L+  L +  +   A   F +    G    + +
Sbjct: 716  KAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGS 775

Query: 240  FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
            +  +I+GL+  + +D +  +  EM  LG   +   Y  I+  + +  ++EE +R+   M 
Sbjct: 776  YNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMH 835

Query: 300  ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                    +TY  +I+ L ++ RL+ A D+  +++  G +PT   +  ++ GL + GK  
Sbjct: 836  RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMV 895

Query: 360  ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
            ++ N   +   Y   P    +N LL     AG       I EKM ++ I  D  S+ + I
Sbjct: 896  DAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLI 955

Query: 415  RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              LC    +        +++   + PD   Y+  + G  K    E+A+ +F ++  + +V
Sbjct: 956  DTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIV 1015

Query: 475  LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
             +  +Y+ L+  L +  K +EA +++  +   G   +  ++N LI G  V    D A   
Sbjct: 1016 PNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAY-- 1073

Query: 535  RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
               AY    +   S  T ++ GLV          + A+M   GC  D   Y +++ ++ +
Sbjct: 1074 --AAYDC-VAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGK 1130

Query: 595  QNKLKD 600
              ++++
Sbjct: 1131 SMRIEE 1136



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/513 (19%), Positives = 211/513 (41%), Gaps = 51/513 (9%)

Query: 73   TNDLSSALKIFKWVSIQKRFQHTADTYCKM--ILKLGLAGNVEEMEGLCQN-MVKERYPN 129
            T DLSS   +   +  ++RF+     +C+M  IL    A     +    +N ++KE    
Sbjct: 630  TPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHT 689

Query: 130  VREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
            V+E ++            SL+   +N   V  ++    N+ S G  L+      ++  + 
Sbjct: 690  VKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLC 749

Query: 178  EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
            + K+       ++ +    G+     + N L+  L + N I+ A D F  M + GC P+ 
Sbjct: 750  KHKKALEAHQ-LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDE 808

Query: 238  RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             T+ +++  +  + R+++ + +  EM   G +     Y  II  L +  +LE+AI L+  
Sbjct: 809  FTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYN 868

Query: 298  MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
            + +    P   TY  L++ L +  ++ DA ++  +M+  G  P   ++  ++ G    G 
Sbjct: 869  LMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGN 928

Query: 358  FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
             +      E       +P    +  L++  C AG+         ++ +  +  D   +N+
Sbjct: 929  TENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNL 988

Query: 413  PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
             I  L ++E I +A  L   M    +VP+  TY++ +L   K     +A +++ ++  + 
Sbjct: 989  LIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKG 1048

Query: 473  LVLDSISY------------------------------SKLVEGLCQVEKITEAVEVFCC 502
               +  +Y                              + L+ GL     I  A  +F  
Sbjct: 1049 WKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAE 1108

Query: 503  MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
            M + GC     ++N+++  +    ++++ ++++
Sbjct: 1109 MKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQ 1141



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 16/267 (5%)

Query: 76   LSSALKIFKWVSIQKRFQHTADTYCKM------ILKLG--LAGNVEEMEGLCQNMVKERY 127
            L   LK  K V  +  F    +  CK       IL  G  +AGN E +  + + MV++  
Sbjct: 885  LDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGI 944

Query: 128  -PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
             P+++   + L+ +     R+N  +     +   G +  + ++N+++  + + +R   + 
Sbjct: 945  NPDIKSYTV-LIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSER-IEEA 1002

Query: 187  VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            V ++ EM K GIVPN+ T N L+  L +  +   A   +  +  KG  PN  T+  +I+G
Sbjct: 1003 VCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRG 1062

Query: 247  LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
               +   D++ +     +D  + + +S  T +I  L  EN +  A  LF  M+     PD
Sbjct: 1063 YSVSGSTDNAYAA----YDC-VAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPD 1117

Query: 307  ELTYEELINCLCENLRLDDANDILEDM 333
            + TY  +++ + +++R+++   + E++
Sbjct: 1118 QFTYNLILDAIGKSMRIEEMLKVQEEI 1144


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 218/501 (43%), Gaps = 43/501 (8%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           + S+  +L+PD +++VL+   D  +AL+ F+W   Q+ + H  D Y  MI  LG A    
Sbjct: 174 LNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFT 233

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV--DVFNV 171
           E++ L Q M  +     R  L S V S+    R   ++     M   G++  +    +N 
Sbjct: 234 ELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNS 293

Query: 172 VLGAIVEEKR------GFADFV-----------------FVYKE-----------MVKAG 197
           VL ++V+ K+       FA  +                 F  KE           M++  
Sbjct: 294 VLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNN 353

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
             P+V T   ++  L +   IE A    ++M + GC PN  T+  +I+GL A  R ++++
Sbjct: 354 YAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEAL 413

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            ++  M   G+   +  YT +   LC+  +L+ A  +F    A  L P+ +TY  L+N  
Sbjct: 414 ELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGY 473

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---LEDKCGYVTS 374
           C   RL +A DIL++M     TP    +  +++GL +  +  +++     +E+K GY  +
Sbjct: 474 CRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK-GYDVN 532

Query: 375 --PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
               N L       G    A     +M DR  A     + + I  L    E+ +A  LL 
Sbjct: 533 FDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLY 592

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M+     P+  TY+  + G C+    +DA  +   +    +  D+ SY+ L++      
Sbjct: 593 EMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQG 652

Query: 492 KITEAVEVFCCMSKNGCSLSS 512
           +  +A +++    + G  L+ 
Sbjct: 653 RTQDADQLYATALERGVVLNP 673



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 195/452 (43%), Gaps = 16/452 (3%)

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD--ELTYEELIN 315
           S+L +M   G ++  S     +    R  + +E++  F +M+ +   P   +  Y  ++ 
Sbjct: 237 SLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLV 296

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L +N +LD A ++   MI  G++  +  +  +++      K ++++  L+D      +P
Sbjct: 297 SLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAP 356

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               +  ++   C       A  +L+KM +     +  ++N  I+ LC      +A EL+
Sbjct: 357 DVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELV 416

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    V P+  TY+    G CKL   + A  +F +  A+ L  + ++Y+ L+ G C+ 
Sbjct: 417 TLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRG 476

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            ++ EA+++   M +N C+    ++  LI GL    ++  A+R+     + G      T 
Sbjct: 477 SRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTL 536

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             +  GL ++   KD  +   +M   G A     Y + I  +S   ++++       M+ 
Sbjct: 537 NILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMIN 596

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G  P+  T  +++ G     +L    + +N ++ +    D+  YNILI     +G T  
Sbjct: 597 KGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQD 656

Query: 671 ASYLLDLMLGKGWV---------PDATTHGLL 693
           A  L    L +G V         PD    GL+
Sbjct: 657 ADQLYATALERGVVLNPKPVIQEPDELPEGLV 688


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 215/497 (43%), Gaps = 52/497 (10%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P     N + +VL +   I  AL  + RM   GC PNS T+ +++ GL       D++ +
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKM 236

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + GI  ++  YT ++  LC E ++E+A RL   M+     PDE+TY   ++ LC+
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
             R+D+A    E +   G T     +  ++ GL + G+FDE +++  +  G   SP    
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISP---- 352

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                                     D   + I IR   E    + A+ LL  M     V
Sbjct: 353 --------------------------DITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFV 386

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD   Y+  +     + N + A  +  ++   ++VLDS +++ ++ GLC+   I +A++V
Sbjct: 387 PDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQV 446

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M ++GC  +  ++N LI GL     +++A   R L +        S + ++ LG  +
Sbjct: 447 FDEMGEHGCHPTVMTYNALIDGLYRAGMLEEA---RMLFHKMEMGNNPSLFLRLTLGANQ 503

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           ++                   D E+   L+  M +  ++         ++++G+VPD  T
Sbjct: 504 VR-------------------DTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVT 544

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             +L++GL     L        +L       D   Y  LI+GLW+    + A+ L   +L
Sbjct: 545 YNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNIL 604

Query: 680 GKGWVPDATTHGLLVGS 696
             G  P    +  ++ S
Sbjct: 605 RSGGFPSLPIYNTMMRS 621



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 186/409 (45%), Gaps = 54/409 (13%)

Query: 180 KRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           KRG A D + ++ EM++ GIVP+V     LL  L    RIE A      M + GC P+  
Sbjct: 226 KRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEV 285

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ + + GL    RVD++      + D G  L L  Y+C+I  L +  + +E +  +  M
Sbjct: 286 TYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEM 345

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP------------------ 340
               + PD   Y  LI    E  R  DA  +L++M   G  P                  
Sbjct: 346 LGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNI 405

Query: 341 -----------TDDVFVD------IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNAL 379
                       ++V +D      ++ GLC+ G  D+++       E  C      +NAL
Sbjct: 406 DRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNAL 465

Query: 380 LECCCNAGKFFLAKCILEKM--------------ADRKIADCDSWNIPIRWLCENEEIRK 425
           ++    AG    A+ +  KM                 ++ D +S    +  +C++ ++ K
Sbjct: 466 IDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLK 525

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AY+LL  ++ S VVPD  TY+  + G CK  N + ALR+F+++  + +  D I+Y  L++
Sbjct: 526 AYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLID 585

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           GL +  +  +A  +F  + ++G   S   +N ++  LC M+K+ +AI L
Sbjct: 586 GLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINL 634



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 130/560 (23%), Positives = 249/560 (44%), Gaps = 32/560 (5%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P    A  +LV +  +  R   A+     M     + +  V+N V   +V+  RG     
Sbjct: 141 PAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVD--RGVILLA 198

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             +Y  MV +G +PN  T   L++ L +      AL  F  M ++G  P+ + + +++  
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R++D+  +L  M + G   +   YT  +  LC+  +++EA   F++++       
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---VN 363
            + Y  LI+ L +  R D+      +M+   ++P   ++  ++R   E G+  ++   ++
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLD 378

Query: 364 FLEDKCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
            ++DK G+V  T  +N LL+   + G    A+ ++ +M    +  D  + NI I  LC+ 
Sbjct: 379 EMKDK-GFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKK 437

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS----------- 469
             I KA ++   M      P   TY+A + G  +    E+A  +F ++            
Sbjct: 438 GLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRL 497

Query: 470 --AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
               + V D+ S  KLV+G+CQ  ++ +A ++   + ++G      ++N LI GLC  + 
Sbjct: 498 TLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKN 557

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D A+RL       G S    TY  ++ GL +  R  D  ++   +L  G    +  Y  
Sbjct: 558 LDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNT 617

Query: 588 LIQSMSEQNKLKDCA-LFFNVMVKA-GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
           +++S+    KL     L+ + + K   L P+ E + +      DG     +   + +L+ 
Sbjct: 618 MMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDG----FLDETVKELIK 673

Query: 646 DSEV---LDSSMYNILINGL 662
             +V   L+ + Y I + GL
Sbjct: 674 IDQVYGSLNPNPYTIWVIGL 693



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 155/326 (47%), Gaps = 7/326 (2%)

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS----WNIPIRWLCENEEIRKAYE 428
           ++   AL+    +AG+   A     +M D    DC      +N   + L +   I  A  
Sbjct: 144 SAAFRALVLAHSSAGRHQEAVEAFSRMGD---FDCRPTAFVYNAVFQVLVDRGVILLALA 200

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L  RMV S  +P+  TY   + G CK     DAL++F ++  + +V D   Y+ L+  LC
Sbjct: 201 LYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLC 260

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              +I +A  + C M +NGC     ++ + + GLC   +VD+A     L    G +    
Sbjct: 261 NEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI 320

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y+ ++ GL +  R  + L    +ML +  + D+  Y ILI+  +E  + KD  L  + M
Sbjct: 321 GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G VPD     +LL  L D   +    S +++++ ++ VLDS+ +NI+I GL K+GL 
Sbjct: 381 KDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLI 440

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV 694
            +A  + D M   G  P   T+  L+
Sbjct: 441 DKAMQVFDEMGEHGCHPTVMTYNALI 466



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 199/484 (41%), Gaps = 60/484 (12%)

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             R + A++ F RM    C P +  +  V + L+    +  ++++   M   G     + 
Sbjct: 157 AGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTT 216

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++  LC+     +A+++F  M    ++PD   Y  L++ LC   R++DA  +L  M 
Sbjct: 217 YIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMK 276

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAGKFF 390
             G  P +  +   + GLC+ G+ DE+ +  E     G+      ++ L++    AG+F 
Sbjct: 277 ENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRF- 335

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                                        +E +    E+LG+    S+ PD   Y+  + 
Sbjct: 336 -----------------------------DEGLSYYTEMLGK----SISPDITLYTILIR 362

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
              +    +DA  +  ++  +  V D+  Y+ L++ L  V  I  A  +   M +N   L
Sbjct: 363 RFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVL 422

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
            S++ NI+I GLC    +DKA+++       G   T  TY  ++ GL +           
Sbjct: 423 DSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYR----------- 471

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
           A ML E          +L   M   N   + +LF  + + A  V D E++  L+ G+   
Sbjct: 472 AGMLEEAR--------MLFHKMEMGN---NPSLFLRLTLGANQVRDTESLRKLVDGMCQS 520

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            Q+      +  ++    V D   YN LINGL K      A  L   +  KG  PD  T+
Sbjct: 521 GQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITY 580

Query: 691 GLLV 694
           G L+
Sbjct: 581 GTLI 584



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 49/362 (13%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP--- 235
           K+G  D    V+ EM + G  P V T N L++ L+    +E A   F +M + G  P   
Sbjct: 436 KKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLF 494

Query: 236 -----------NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
                      ++ +   ++ G+  + +V  +  +L  + + G+  ++  Y  +I  LC+
Sbjct: 495 LRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCK 554

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              L+ A+RLFK ++   + PDE+TY  LI+ L    R +DA  + ++++  G  P+  +
Sbjct: 555 AKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPI 614

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCG--YVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
           +  ++R LC + K  +++N   D     Y  SP +   E   NA      KC  +   D 
Sbjct: 615 YNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPED---EVIANA-----RKCFEDGFLDE 666

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            +                +E+ K  ++ G     S+ P+   Y+ +V+G C++   +DAL
Sbjct: 667 TV----------------KELIKIDQVYG-----SLNPN--PYTIWVIGLCQVRKIDDAL 703

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           R+F  +    +V+     + L+  LC    +  AV++          +S    N L+  L
Sbjct: 704 RIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSL 763

Query: 523 CV 524
           C+
Sbjct: 764 CI 765



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 23/262 (8%)

Query: 455 LCNYEDALRVFRQVS---AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
           L +  DA+ +F  ++   A  L   S ++  LV       +  EAVE F  M    C  +
Sbjct: 119 LASEPDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPT 178

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAY-----SSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           +  +N +   L     VD+ + L +LA      SSG    ++TY  +M GL K   A D 
Sbjct: 179 AFVYNAVFQVL-----VDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDA 233

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L +  +ML  G   DV+ Y +L+ S+  + +++D       M + G  PD  T    L G
Sbjct: 234 LKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSG 293

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L    ++         L      L    Y+ LI+GL++ G   +       MLGK   PD
Sbjct: 294 LCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPD 353

Query: 687 ATTHGLLVGSSVGEEIDSRRFA 708
            T + +L+          RRFA
Sbjct: 354 ITLYTILI----------RRFA 365


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 222/466 (47%), Gaps = 14/466 (3%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
            C PN+ ++ ++++ L A+   D +V +L  M   G++ ++  Y  +I  LC   ++++A
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           + L   M    + P+ + Y  L+   C++ R +D   +  +M   G+ P   ++  ++  
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 352 LCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-D 406
           LC+VGK  ++   ++        P    +N L+ C C  G    A  +L+KM+++ +A D
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSS--VVPDCATYSAFVLGKCKLCNYEDALRV 464
             ++N  I+ L +  E+ +A  LL  MV     V P+  T+++ + G C +     A +V
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
              +     +++ ++Y+ L+ GL +V K+ +A+E+   M+  G    S +++ILI G C 
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALD 581
           M +VD+A  L S     G       Y  +++ + +   ++RA++L       +     LD
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF----NEMDNNFPLD 465

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           V AY  +I    +   LK        +V  GL PD  T   +++  A    +   +  + 
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           ++ +   + D ++++ LI G   +G  ++   L+  M+ K    D+
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 212/433 (48%), Gaps = 17/433 (3%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDL------MPDELTYEELINCLCENLRLDDAND 328
           Y  ++  LCR    +   R   ++RA+ L       P+ ++Y  L+  LC +   D A  
Sbjct: 80  YNTVLTALCRRGHHD---RAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVG 136

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           +L  M   G+      +  ++RGLC+  + D++V  + + C     P    +++LL+  C
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            +G++     +  +M+++ I  D   +   I  LC+  + +KA+ ++  MV   + P+  
Sbjct: 197 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV 256

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY+  +   CK  + ++A+ V +++S + +  D ++Y+ L++GL  V ++ EA+ +   M
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 504 --SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
              KN    +  +FN +I GLC + ++ +A ++R++   +G      TY  ++ GL+++ 
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           + +  + ++ +M   G   D   Y ILI+   +  ++       + M   G+ P+    +
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            LL  + +   +    +  N++  ++  LD   Y+ +I+G  K G    A  LL  ++ +
Sbjct: 437 PLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 682 GWVPDATTHGLLV 694
           G  PDA T+ +++
Sbjct: 496 GLTPDAVTYSIVI 508



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/550 (22%), Positives = 249/550 (45%), Gaps = 55/550 (10%)

Query: 128 PNVREAL-----ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           P+VR+A+     ++ +    +H R    +R +        + +   + V++ A+  ++  
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADR-- 129

Query: 183 FAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            AD  V + + M  AG+  +V T   L+  L +   ++ A++    M + G  PN   + 
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +++G   + R +D   +  EM + GI+ ++  YT +I  LC+  K ++A  +  MM   
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            L P+ +TY  LINC+C+   + +A  +L+ M   G+ P    +  +++GL +V + DE+
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 362 VNFLED--KCGYVTSPH----NALLECCCNAGKF---FLAKCILEKMADRKIADCDSWNI 412
           +  LE+  +   +  P+    N++++  C+ G+    F  + ++E+     + +  ++N+
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG--CMVNLVTYNL 367

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  L    ++RKA EL+  M    + PD  TYS  + G CK+   + A  +   +  + 
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           +  +   Y  L+  +C+   +  A  +F  M  N   L   +++ +I+G C      KA 
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMIHGAC------KAG 480

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L++                          AK+L   L  ++ EG   D   Y I+I   
Sbjct: 481 DLKT--------------------------AKEL---LKSIVDEGLTPDAVTYSIVINMF 511

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
           ++   ++        M  +G +PD     SL+ G +   +++ V   I ++++ +  LDS
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571

Query: 653 SMYNILINGL 662
            + + L   L
Sbjct: 572 KIISTLSTSL 581



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 216/531 (40%), Gaps = 57/531 (10%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMR 152
           A +Y  ++  L   G+ +    L + M  E +P  R   +S   L+ +       + A+ 
Sbjct: 77  AVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVG 136

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK------EMVKAGIVPNVDTLN 206
           +L +M S G +  V  +  ++       RG  D   V K      EM ++GI PNV   +
Sbjct: 137 LLRSMRSAGVRADVVTYGTLI-------RGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LL+   ++ R E     F  M +KG  P+   +  +I  L    +   +  ++  M   
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  Y  +I  +C+E  ++EAI + K M    + PD +TY  LI  L + L +D+A
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 327 NDILEDMIVIG--LTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALL 380
             +LE+M+     + P    F  +++GLC++G+  ++        E  C      +N L+
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                  K   A  ++++M    +  D  +++I I+  C+  ++ +A +LL  M    + 
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 440 P----------------------------------DCATYSAFVLGKCKLCNYEDALRVF 465
           P                                  D   YS  + G CK  + + A  + 
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           + +  + L  D+++YS ++    +   +  A  V   M+ +G     + F+ LI G    
Sbjct: 490 KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTK 549

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +++K + L     +   +  +   + +   LV     K LL  L     E
Sbjct: 550 GEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAE 600



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 65/403 (16%)

Query: 312 ELINCLCENLRL---DDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDESVNFLED 367
           E   CL  +LRL    +A  +L+ +  +     D V +  ++  LC  G  D +   L  
Sbjct: 47  EAAACLNRHLRLLPLGEATSLLDALPSV----RDAVSYNTVLTALCRRGHHDRAGALLR- 101

Query: 368 KCGYVTSPHNALLECCCNAGKF--FLAKCILEKMADRKI------------ADCDSWNIP 413
                  PH A   C  NA  +   +     +++AD+ +            AD  ++   
Sbjct: 102 --AMSLEPHPA---CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           IR LC+  E+ KA EL+G M  S + P+   YS+ + G CK   +ED  +VF ++S + +
Sbjct: 157 IRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGI 216

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D + Y+ L++ LC+V K  +A  V   M + G   +  ++N+LI  +C    V +AI 
Sbjct: 217 EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                                              VL +M  +G A DV  Y  LI+ +S
Sbjct: 277 -----------------------------------VLKKMSEKGVAPDVVTYNTLIKGLS 301

Query: 594 EQNKLKDCALFFNVMVKAGLV--PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +  ++ +       MV+   +  P+  T  S++ GL D  ++         +     +++
Sbjct: 302 DVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVN 361

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              YN+LI GL +     +A  L+D M   G  PD+ T+ +L+
Sbjct: 362 LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 20/379 (5%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDT 204
           ++  A R+   M + G    +  +NV+L      K G+ D  F   +++ K G +  V  
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLITYNVLLNGFC--KSGYLDDAFTLLQLLTKDGHILGVIG 305

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
              L+  LF   R E A   +++M ++   P+   + I+I+GL    RV +++++LGEM 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + G++ +   Y  +I   C    L+EA  L   +   D  P+  TY  LI  +C+N  ++
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCC 384
            A  I ++M  +G  P+   F  ++ GLC+  + +E+   L  +   V  P         
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA-RLLFYQMEIVRKP--------- 475

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                FL    L +  D K+ D  S  + +  LCE+  I KAY+LL ++V S V+PD  T
Sbjct: 476 ---SLFLR---LSQGTD-KVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRT 528

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK  N   A ++F+++  +  + DS++Y  L++GL +  +  +A+E+F  M 
Sbjct: 529 YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV 588

Query: 505 KNGCSLSSSSFNILIYGLC 523
           K GC   SS++  ++   C
Sbjct: 589 KKGCVPESSTYKTIMTWSC 607



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/572 (23%), Positives = 258/572 (45%), Gaps = 34/572 (5%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V ++++G +++E   F  +  V +E+  + I  + +  + L+E   E    E A++ F  
Sbjct: 95  VQDLIIGKLIKEN-AFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSL 153

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M    C P+   F +++  L+       ++++  +M    +  ++  Y  +I  LC+  K
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            ++A+ LF  M    ++P+++ Y  +++ LC+  ++ DA  +   M   G       +  
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 348 IVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C+ G  D++   L+   K G++     +  L+     A ++  A    +KM    
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I  D   + I IR L +   + +A  LLG M    + PD   Y+A + G C +   ++A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++S      ++ +YS L+ G+C+   I +A  +F  M K GC  S  +FN LI GL
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   ++++A   R L Y        S + ++  G  K+     L V++ ++   G  L  
Sbjct: 454 CKANRLEEA---RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMIL-- 508

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
           +AY +L+Q                 +V +G++PD  T   L++G      ++       +
Sbjct: 509 KAYKLLMQ-----------------LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           +     + DS  Y  LI+GL++ G    A  + + M+ KG VP+++T+  ++  S  E  
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENN 611

Query: 703 DS------RRFAFDSSSFPDSVSDILAEGLGN 728
            S       ++  D   + D    ++AE   N
Sbjct: 612 ISLALSVWMKYLRDFRGWEDEKVRVVAESFDN 643



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 201/473 (42%), Gaps = 40/473 (8%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  +I  L  A   EE     Q M++E   P+V    I ++       RV  A+ +L  M
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTI-MIRGLSQEGRVTEALTLLGEM 364

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK------EMVKAGIVPNVDTLNYLLEV 211
              G +     +N ++       +GF D  ++ +      E+ K    PN  T + L+  
Sbjct: 365 TERGLRPDTICYNALI-------KGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-----FDL 266
           + +   I  A   F+ M K GC P+  TF  +I GL   +R++++  +  +M       L
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477

Query: 267 GIQL--------ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
            ++L        +++    ++  LC    + +A +L   +    ++PD  TY  LIN  C
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTS 374
           +   ++ A  + ++M + G  P    +  ++ GL   G+ ++++   E      C   +S
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESS 597

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW-NIPIRWLCE---NEEIRKAYELL 430
            +  ++   C      LA  +  K     + D   W +  +R + E   NEE++ A   L
Sbjct: 598 TYKTIMTWSCRENNISLALSVWMKY----LRDFRGWEDEKVRVVAESFDNEELQTAIRRL 653

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M + S   D A Y+ F++G  +     +A  +F  +    + + S S   L+  LC V
Sbjct: 654 LEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMV 713

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           E +  A++VF    + G  L     N L+  L  + + D A+ L +   +SGT
Sbjct: 714 ENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASGT 766


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 215/473 (45%), Gaps = 28/473 (5%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           YP+ R    SLV ++        A ++L  M   G +    V+N+++G I   +    D 
Sbjct: 109 YPSPR-IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDV 167

Query: 187 V----FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           +      Y EM++AG+V N   ++     L    + E A +  R M  KG  P++ T+  
Sbjct: 168 LDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSK 227

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           VI  L   S+V+ +  +  EM   GI  ++  YT +I   C+   +E+A   F  M    
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG 287

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ +TY  LI+   ++ ++  AN++ E M+  G TP    +  ++ GLC+ GK +++ 
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKAS 347

Query: 363 NFLE-DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
              +  K   V  P    H  +++   N    F                  ++   +  L
Sbjct: 348 QIYKIMKKENVEIPDVDMHFRVVDGASNEPNVF------------------TYGALVDGL 389

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C+  ++++A +LL  M V    P+   Y A + G CK    ++A  VF  +       + 
Sbjct: 390 CKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNV 449

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +YS L++ L + +++  A++V   M +N C+ +   +  +I GLC + K D+A +L  +
Sbjct: 450 YTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVM 509

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
               G +    TYT ++ G  K  R +  L +L QM  +GCA +   Y +LI 
Sbjct: 510 MEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 215/522 (41%), Gaps = 52/522 (9%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K   VP+      ++  L E +  E A+D   RM    C PN  T+ I++ G +   ++ 
Sbjct: 35  KEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLG 94

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
               IL  M   G       +  ++   CR      A +L K M      P  + Y  LI
Sbjct: 95  RCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILI 154

Query: 315 NCLCENLR-----LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
             +C +       LD A     +M+  G+        +  R LC +GKF+++ N      
Sbjct: 155 GGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNV----- 209

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
                                    I E M+   I D  +++  I +LC   ++ KA++L
Sbjct: 210 -------------------------IREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQL 244

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              M  + + PD   Y+  +   CK    E A   F ++       + ++Y+ L+    +
Sbjct: 245 FQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLK 304

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS-------- 541
             K+++A EV+  M   GC+ +  ++  LI GLC   K++KA ++  +            
Sbjct: 305 SRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVD 364

Query: 542 -------GTSYTTS--TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
                  G S   +  TY  ++ GL K  + K+   +L  M VEGC  +   Y  LI   
Sbjct: 365 MHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGC 424

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +  KL +    F  M++ G  P+  T  SL+  L    +L L    ++K++ +S   + 
Sbjct: 425 CKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNV 484

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +Y  +I+GL K G T +A  L+ +M  KG  P+  T+  ++
Sbjct: 485 VIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMI 526



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 132/590 (22%), Positives = 237/590 (40%), Gaps = 63/590 (10%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
           AM  L  M +     +V  + ++L G + +EK G    +     M+  G  P+    N L
Sbjct: 61  AMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRIL--SMMITEGCYPSPRIFNSL 118

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR-----VDDSVSILGEM 263
           +     +     A    ++M + GC P    + I+I G+ ++       +D +    GEM
Sbjct: 119 VHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEM 178

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            + G+ L     +     LC   K E+A  + + M +   +PD  TY ++I  LC   ++
Sbjct: 179 LEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKV 238

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNAL 379
           + A  + ++M   G+ P   V+  ++   C+ G  +++ N+ +    D C      + AL
Sbjct: 239 EKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTAL 298

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                          I   +  RK++                   KA E+   M+     
Sbjct: 299 ---------------IHAYLKSRKVS-------------------KANEVYEMMLSKGCT 324

Query: 440 PDCATYSAFVLGKCKLCNYEDALRV-----------------FRQVSAQSLVLDSISYSK 482
           P+  TY+A + G CK    E A ++                 FR V   S   +  +Y  
Sbjct: 325 PNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGA 384

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           LV+GLC+  ++ EA ++   MS  GC  +   ++ LI G C   K+D+A  + +     G
Sbjct: 385 LVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECG 444

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TY+ ++  L K +R    L VL++ML   CA +V  Y  +I  + +  K  +  
Sbjct: 445 YDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 504

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
               +M + G  P+  T  +++ G     ++      + ++ S     +   Y +LIN  
Sbjct: 505 KLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHC 564

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSS 712
              GL  +A  LL+ M    W      +  ++     E I S   +F+ S
Sbjct: 565 CSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEIS 614



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/429 (21%), Positives = 191/429 (44%), Gaps = 48/429 (11%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +   A  V+  M S GF      ++ V+G +    +    F  +++EM + GI P+V   
Sbjct: 202 KFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ-LFQEMKRNGIAPDVYVY 260

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++   +   IE A + F  M + GC PN  T+  +I   + + +V  +  +   M  
Sbjct: 261 TTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLS 320

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL-----------------MPDEL 308
            G    +  YT +I  LC+  K+E+A +++K+M+  ++                  P+  
Sbjct: 321 KGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVF 380

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  L++ LC+  ++ +A D+L+ M V G  P   V+  ++ G C+ GK DE+       
Sbjct: 381 TYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF--- 437

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                     +LEC  +   +  +  I     DR              L +++ +  A +
Sbjct: 438 --------TTMLECGYDPNVYTYSSLI-----DR--------------LFKDKRLDLALK 470

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +L +M+ +S  P+   Y+  + G CK+   ++A ++   +  +    + ++Y+ +++G  
Sbjct: 471 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFG 530

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  ++ + +E+   MS  GC+ +  ++ +LI   C    +D+A +L      +      +
Sbjct: 531 KSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVA 590

Query: 549 TYTKIMLGL 557
            Y K++ G 
Sbjct: 591 GYRKVIEGF 599



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 222/510 (43%), Gaps = 33/510 (6%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           + K F     TY K+I  L  A  VE+   L Q M +           +L+ SF     +
Sbjct: 214 MSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFI 273

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
             A      M   G   +V  +  ++ A ++ ++  +    VY+ M+  G  PN+ T   
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRK-VSKANEVYEMMLSKGCTPNIVTYTA 332

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCC-----------------PNSRTFEIVIKGLIAN 250
           L++ L +  +IE A   ++ M K+                    PN  T+  ++ GL   
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +V ++  +L  M   G +     Y  +I   C+  KL+EA  +F  M      P+  TY
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTY 452

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----E 366
             LI+ L ++ RLD A  +L  M+     P   ++ +++ GLC+VGK DE+   +    E
Sbjct: 453 SSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE 512

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCI--LEKMADRKIA-DCDSWNIPIRWLCENEEI 423
             C      + A+++    +G+  + KC+  L++M+ +  A +  ++ + I   C    +
Sbjct: 513 KGCNPNVVTYTAMIDGFGKSGR--VEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLL 570

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A++LL  M  +      A Y   + G  +   +  +L +  ++S    V  +  Y  L
Sbjct: 571 DEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR--EFIASLYLSFEISENDSVPVAPVYRVL 628

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI---LIYGLCVMRKVDKAIRLRSLAYS 540
           ++   +  ++  A+E+   +S      S+++ NI   LI  L +  K DKA  L +   S
Sbjct: 629 IDNFIKAGRLEIALELNEELSSFS-PFSAANQNIHITLIENLSLAHKADKAFELYADMIS 687

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
            G+    S    ++ GL+++ R ++ L +L
Sbjct: 688 RGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 171/395 (43%), Gaps = 27/395 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY------------------PNVREALISLVF 139
           TY  +I  L  AG +E+   + + M KE                    PNV     +LV 
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVF-TYGALVD 387

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
                Y+V  A  +L +M+  G + +  V++ ++    +  +   +   V+  M++ G  
Sbjct: 388 GLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGK-LDEAQEVFTTMLECGYD 446

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV T + L++ LF+  R++ AL    +M +  C PN   +  +I GL    + D++  +
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           +  M + G    +  YT +I    +  ++E+ + L + M +    P+ +TY  LIN  C 
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCS 566

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE--VGKFDESVNFLEDKCGYVTSPHN 377
              LD+A+ +LE+M           +  ++ G     +     S    E+    V   + 
Sbjct: 567 TGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYR 626

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN----EEIRKAYELLGRM 433
            L++    AG+  +A  + E+++        + NI I  L EN     +  KA+EL   M
Sbjct: 627 VLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHIT-LIENLSLAHKADKAFELYADM 685

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           +    +P+ +     + G  ++  +E+AL++   +
Sbjct: 686 ISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 132/321 (41%), Gaps = 49/321 (15%)

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC++ + R+A  LL +      VPD   Y+  + G C+   +E+A+    ++ A S + +
Sbjct: 20  LCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPN 76

Query: 477 SISYSKLVEGLCQVEK-----------ITEA-----------VEVFC------------- 501
            ++Y  L+ G    EK           ITE            V  +C             
Sbjct: 77  VLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLK 136

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDK-AIRLRSLAYS----SG---TSYTTSTYTKI 553
            M + GC      +NILI G+C   +  K  + L   AY     +G        S +++ 
Sbjct: 137 KMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRC 196

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G+ K ++A +   V+ +M+ +G   D   Y  +I  +   +K++     F  M + G+
Sbjct: 197 LCGIGKFEKAYN---VIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGI 253

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD     +L+        +    +  +++  D    +   Y  LI+   K    S+A+ 
Sbjct: 254 APDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANE 313

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           + ++ML KG  P+  T+  L+
Sbjct: 314 VYEMMLSKGCTPNIVTYTALI 334



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 48/302 (15%)

Query: 109 AGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           AG ++E + +   M++  Y PNV     SL+       R++ A++VL  M       +V 
Sbjct: 427 AGKLDEAQEVFTTMLECGYDPNVY-TYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVV 485

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMV---KAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           ++  ++  +   K G  D    YK MV   + G  PNV T   +++   ++ R+E  L+ 
Sbjct: 486 IYTEMIDGLC--KVGKTDEA--YKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLEL 541

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM--------------------F 264
            ++M  KGC PN  T+ ++I    +   +D++  +L EM                     
Sbjct: 542 LQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR 601

Query: 265 DLGIQLELSF-------------YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +    L LSF             Y  +I    +  +LE A+ L + + +    P     +
Sbjct: 602 EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFS--PFSAANQ 659

Query: 312 ELINCLCENLRL----DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            +   L ENL L    D A ++  DMI  G  P   + V +++GL  V +++E++  L+ 
Sbjct: 660 NIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDS 719

Query: 368 KC 369
            C
Sbjct: 720 IC 721


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 244/581 (41%), Gaps = 14/581 (2%)

Query: 150 AMRVLVNMNSGGFKLSVDVF-NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
           A+ V  ++   G K  V  +  +VLG    ++  F D + +  EMV+ G VP    ++ L
Sbjct: 272 ALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQ--FDDGICLMNEMVELGFVPTEAAVSGL 329

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L +   I+SA D   ++ + G  PN   +  +I  L     +D +  +   M  + +
Sbjct: 330 VDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNL 389

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            L    Y+ +I   C+   L+ A   F  M    +      Y  LIN  C+   L  A  
Sbjct: 390 PLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEF 449

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           +   MI  GL PT   F  ++ G C+  + +++     +      +P      AL+   C
Sbjct: 450 LYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509

Query: 385 NAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
           +  +   A  + ++M +RKI   + ++N+ I   C+   + KA+ELL  M+ + +VPD  
Sbjct: 510 STNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTY 569

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY   + G C       A      +  ++L L+ + YS L+ G C   ++TEA+   C M
Sbjct: 570 TYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEM 629

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G ++      +LI G    + + +   L    Y  G    +  YT ++    K    
Sbjct: 630 IQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSF 689

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           K     L  M+ E C  +V  Y   +  + +  ++      F  M+ A + P+  T    
Sbjct: 690 KKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCF 749

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           L  L     +   +   ++++    + +++ YNILI G  K G   +A+ +L  M   G 
Sbjct: 750 LDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGI 808

Query: 684 VPDATTHGLLV-----GSSVGEEIDSRRFAFDSSSFPDSVS 719
            PD  T+  ++        VG  ++           PDSV+
Sbjct: 809 FPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVA 849



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 162/779 (20%), Positives = 316/779 (40%), Gaps = 100/779 (12%)

Query: 39  TDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNT-NDLSSALKIFKWVSIQKRFQHTAD 97
           +D+++ + +        S+   L P H+ +VL NT +D   AL+ F ++ + K   HT  
Sbjct: 38  SDIVRGNLSWKIAFNDPSISSTLKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTT 97

Query: 98  TYCKMIL-----KLGLAGN----VEEMEGLCQNMVKERYPNVRE--------ALISLVFS 140
           ++  ++      KL    N       + G     V E++    +            LV S
Sbjct: 98  SFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHS 157

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
           ++ + RV  A+ VL  M        V   + +L  ++   R F     V+ E V AG+ P
Sbjct: 158 YLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLR-IRKFILVWEVFDESVNAGVKP 216

Query: 201 NVDTLNYLLEVL---------------FETNRIE--------------------SALDQF 225
           +  T + ++  L                E+NR +                     AL+  
Sbjct: 217 DPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVR 276

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           + + +KG   +  T+  ++ G     + DD + ++ EM +LG     +  + ++  L ++
Sbjct: 277 KSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKK 336

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             ++ A  L   +     +P+   Y  LIN LC+   LD A  + ++M  + L   D  +
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396

Query: 346 VDIVRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCC-----NAGKFFLAKCIL 396
             ++   C+ G  D + ++    +ED       P+N+L+   C     +A +F   K I 
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456

Query: 397 E------------------------------KMADRKIA-DCDSWNIPIRWLCENEEIRK 425
           E                              +M +++IA    ++   I  LC   E+ +
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A +L   MV   + P   TY+  + G CK  N + A  +   +    LV D+ +Y  L+ 
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC   +++ A +    + K    L+   ++ L++G C   ++ +A+         G + 
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               +  ++ G +K Q  K L  +L +M  +G   D   Y  +I + S++   K      
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           ++MV     P+  T  + ++GL    ++        K+++ +   +S  Y   ++ L KE
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKE 756

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSS---FPDSVS 719
           G   +A+ L   ML KG + +  T+ +L+     +G  I++ +   + +    FPD ++
Sbjct: 757 GNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCIT 814



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/438 (22%), Positives = 194/438 (44%), Gaps = 7/438 (1%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G++   E L   M+ E          +L+  +    +V  A ++   MN      SV  F
Sbjct: 442 GDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTF 501

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             ++  +       A+   ++ EMV+  I P   T N ++E   + + ++ A +    M 
Sbjct: 502 TALIYGLCSTNE-MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDML 560

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G  P++ T+  +I GL +  RV  +   + ++    ++L    Y+ ++   C + +L 
Sbjct: 561 HNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLT 620

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           EA+     M    +  D + +  LI+   +   +     +L+ M   GL P   ++  ++
Sbjct: 621 EALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMI 680

Query: 350 RGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
               + G F +S   L+    +KC      + A +   C  G+   A  + EKM    I+
Sbjct: 681 DAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANIS 740

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  ++   +  L +   +++A +L   M+   ++ + ATY+  + G CKL    +A +V
Sbjct: 741 PNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKV 799

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
             +++   +  D I+YS ++   C+   +  AVE++  M + G    S +FN+LIYG CV
Sbjct: 800 LSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCV 859

Query: 525 MRKVDKAIRLRSLAYSSG 542
              +DKA  LR+   S G
Sbjct: 860 NGALDKAFELRNDMLSRG 877



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/474 (22%), Positives = 209/474 (44%), Gaps = 17/474 (3%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREA 133
           DLS+A  ++  + I +  + TA T+  +I        VE+   L + M  KE  P+V   
Sbjct: 443 DLSAAEFLYTKM-INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVY-T 500

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
             +L++   +   +  A ++   M     K +   +NV++    +       F  + ++M
Sbjct: 501 FTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELL-EDM 559

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           +  G+VP+  T   L+  L  T R+ +A D    +HKK    N   +  ++ G     R+
Sbjct: 560 LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRL 619

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
            +++S   EM   GI ++L  +  +I    ++  ++    L K M    L PD + Y  +
Sbjct: 620 TEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSM 679

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+   +      + + L+ M+     P    +   + GLC+VG+ D + +  E       
Sbjct: 680 IDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANI 739

Query: 374 SPHNALLECCCNA----GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
           SP++    C  ++    G    A  +  +M    +A+  ++NI IR  C+   + +A ++
Sbjct: 740 SPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKV 799

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M  + + PDC TYS  +   C+  +   A+ ++  +  + +  DS++++ L+ G C 
Sbjct: 800 LSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCV 859

Query: 490 VEKITEAVEVFCCMSKNGC------SLSSSSF---NILIYGLCVMRKVDKAIRL 534
              + +A E+   M   G        L        N L++G CV  +VD A+RL
Sbjct: 860 NGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRL 913


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 257/569 (45%), Gaps = 19/569 (3%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           +L +L  SFVN +  + A  VL  M   GF ++V   N+VL      + G  D       
Sbjct: 79  SLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFC--RSGQCDKAMSLFS 136

Query: 193 MVKAG---IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG-CCPNSRTFEIVIKGLI 248
            +K     +VP+  T N L+    +  R+  A   F  M K G C PN  T+ ++I    
Sbjct: 137 QMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYC 196

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +  V + + +L EM   G++ ++  Y+ +I   C E  +E    LF  M    + P+ +
Sbjct: 197 KSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVV 256

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-- 366
           TY  L+  L    R  +A+++L+DM   G+ P    +  +  GLC+ G+  +++  L+  
Sbjct: 257 TYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLM 316

Query: 367 ----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
               ++ G +T  +N ++   C   +   A  ++E M  + K  D  ++N  ++ LC   
Sbjct: 317 VQKGEEPGTLT--YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAG 374

Query: 422 EIRKAYELLGRMVVSS---VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +I +A +L  ++++S    V PD  T +  + G CK     DA R+   +    L  + +
Sbjct: 375 KIHEAMDLW-KLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIV 433

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +Y+ L+EG     K+ EA++++    ++G S +S +++++I GLC M+ +  A  L    
Sbjct: 434 TYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKM 493

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             SG   T   Y  +M  L +    +    +  +M      +DV ++ I+I    +   +
Sbjct: 494 KDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDV 553

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           K      + M    LVPD  T   L++  +    L        K+VS   V    +++ L
Sbjct: 554 KSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSL 613

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           + G   +G T +   LL  M  K  V D+
Sbjct: 614 LKGYGLKGETEKIISLLHQMADKDVVLDS 642



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 232/529 (43%), Gaps = 12/529 (2%)

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
           + + R +   V VY +MV A ++P   +L+ L E    T+    A      M K+G   N
Sbjct: 52  LRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVN 111

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEM---FDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
                +V+KG   + + D ++S+  +M   +D  +  +   Y  ++   C+  +L EA  
Sbjct: 112 VYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVP-DCVTYNTLVNGFCKAKRLAEARV 170

Query: 294 LFKMMR-ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           LF+ M+   D  P+ +TY  LI+C C++  + +   +LE+M   GL     V+  ++   
Sbjct: 171 LFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAF 230

Query: 353 CEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           C  G  +      ++      SP    ++ L++     G++  A  +L+ M  R +  D 
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDV 290

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++ +    LC+N     A ++L  MV     P   TY+  V G CK    +DA  V   
Sbjct: 291 VAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEM 350

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF--NILIYGLCVM 525
           +  +    D+++Y+ L++GLC   KI EA++++  +      +    F  N LI GLC  
Sbjct: 351 MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKE 410

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            +V  A R+ S     G      TY  ++ G +  ++  + L +    +  G + +   Y
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTY 470

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            ++I  + +   L      F  M  +G+ P      +L+  L     L    S   ++ +
Sbjct: 471 SVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRN 530

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +  +D   +NI+I+G  K G    A  LL  M     VPDA T  +L+
Sbjct: 531 VNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 159/332 (47%), Gaps = 8/332 (2%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
           A+K+   + +QK  +    TY  ++  L     +++  G+ + MVK+          +L+
Sbjct: 309 AIKVLDLM-VQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF--NVVLGAIVEEKRGFADFVFVYKEMVKA 196
                  +++ AM +   + S  F +  DVF  N ++  + +E R   D   ++  MV+ 
Sbjct: 368 KGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGR-VHDAARIHSSMVEM 426

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+  N+ T N+L+E      ++  AL  ++   + G  PNS T+ ++I GL     +  +
Sbjct: 427 GLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVA 486

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +  +M D GI+  +  Y  ++  LCRE+ LE+A  LF+ MR ++   D +++  +I+ 
Sbjct: 487 RGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDG 546

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS 374
             +   +  A ++L +M ++ L P    F  ++    ++G  DE++   E    CG+V  
Sbjct: 547 TLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPG 606

Query: 375 --PHNALLECCCNAGKFFLAKCILEKMADRKI 404
               ++LL+     G+      +L +MAD+ +
Sbjct: 607 VVVFDSLLKGYGLKGETEKIISLLHQMADKDV 638



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 142/368 (38%), Gaps = 43/368 (11%)

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCI 395
           P++     ++  L +  ++D  V+        +  P     +AL E   N      A  +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV--VSSVVPDCATYSAFVLGK 452
           L  M  R    +  + N+ ++  C + +  KA  L  +M      VVPDC TY+  V G 
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 453 CKLCNYEDALRVFRQVS-AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
           CK     +A  +F  +        + ++YS L++  C+  ++ E + +   M + G    
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
              ++ LI   C    ++    L         S    TY+ +M GL +  R ++   +L 
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M   G   DV AY +L   + +  +  D     ++MV+ G  P   T            
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLT------------ 327

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
                                  YN+++NGL KE     A  ++++M+ KG  PDA T+ 
Sbjct: 328 -----------------------YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYN 364

Query: 692 LLVGSSVG 699
            L+    G
Sbjct: 365 TLLKGLCG 372



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 130/304 (42%), Gaps = 11/304 (3%)

Query: 402 RKIADCDSWNIPIRWLCEN--EEIRKAYE------LLGRMVVSSVVPDCATYSAFVLGKC 453
            +  D D  + P    C    + +RKA +      +  +MV + V+P   + SA      
Sbjct: 29  HRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFV 88

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN-GCSLSS 512
              +   A  V   ++ +   ++  + + +++G C+  +  +A+ +F  M +N  C +  
Sbjct: 89  NTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPD 148

Query: 513 S-SFNILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
             ++N L+ G C  +++ +A +   ++           TY+ ++    K     + L +L
Sbjct: 149 CVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLL 208

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +M  EG   DV  Y  LI +   +  ++     F+ M++  + P+  T   L+ GL   
Sbjct: 209 EEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRT 268

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +    S  +  + +     D   Y +L +GL K G    A  +LDLM+ KG  P   T+
Sbjct: 269 GRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTY 328

Query: 691 GLLV 694
            ++V
Sbjct: 329 NVVV 332


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 230/508 (45%), Gaps = 46/508 (9%)

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKG 246
           F+   ++ +G++P   +L  +L ++  + RI S+L  Q  + H   C   +  ++ V+  
Sbjct: 43  FILNHLLSSGMLPQAQSL--ILRLI--SGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNA 98

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
            + +   D +++ L  M   G     + +  ++ +L R N  ++A  +F  +++      
Sbjct: 99  YVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKS------ 152

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
                                 ++ D    G+         +++G CE G F +    L 
Sbjct: 153 ---------------------KVVLDAYSFGI---------MIKGCCEAGYFVKGFRLLA 182

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
               +  SP    +  L++ CC  G   LAK +  KM     + +  ++++ +    +  
Sbjct: 183 MLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQG 242

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
             R+ +++   M  S +VP+   Y+  +   C     + A +VF ++  + +    ++Y+
Sbjct: 243 LQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYN 302

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GLC+ +K  EAV++   ++K G S +  ++NILI G C +RK+D A+RL +   SS
Sbjct: 303 ILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSS 362

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S T  TY  ++ G  K++     L ++ +M     A     Y ILI + +  N  +  
Sbjct: 363 GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKA 422

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
               ++M K+GLVPD  T   LLHGL     +   S     L       +S +YN +I+G
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATT 689
             KEG + +A  LL+ M+  G VP+  +
Sbjct: 483 YCKEGSSYRALRLLNEMVQSGMVPNVAS 510



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 152/363 (41%), Gaps = 32/363 (8%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M + G+VPN  T + L+   F+          +  M + G  PN+  +  +I     + 
Sbjct: 218 KMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDG 277

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            VD +  +  EM + GI   +  Y  +I  LCR  K  EA++L   +  + L P+ +TY 
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LIN  C+  ++D A  +   +   GL+PT   +  ++ G  +V                
Sbjct: 338 ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL------------- 384

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELL 430
                         AG   L K    +M +R IA    ++ I I          KA E+ 
Sbjct: 385 --------------AGALDLVK----EMEERCIAPSKVTYTILIDAFARLNHTEKACEMH 426

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M  S +VPD  TYS  + G C   N ++A ++F+ +    L  +S+ Y+ ++ G C+ 
Sbjct: 427 SLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
                A+ +   M ++G   + +SF   I  LC   K  +A  L     +SG   + S Y
Sbjct: 487 GSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546

Query: 551 TKI 553
             +
Sbjct: 547 KMV 549



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 158/389 (40%), Gaps = 30/389 (7%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ PNV     L++   +   +  A + F +M++ G  PN  T+ +++ G        + 
Sbjct: 188 GLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREG 247

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +   M   GI      Y C+I   C +  +++A ++F  MR   +    +TY  LI  
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC   +  +A  ++  +  +GL+P    +  ++ G C+V K D +V           SP 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSP- 366

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
                                           ++N  I    + E +  A +L+  M   
Sbjct: 367 -----------------------------TLVTYNTLIAGYSKVENLAGALDLVKEMEER 397

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            + P   TY+  +    +L + E A  +   +    LV D  +YS L+ GLC    + EA
Sbjct: 398 CIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEA 457

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            ++F  + +     +S  +N +I+G C      +A+RL +    SG     +++   +  
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGL 517

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           L + ++ K+  ++L QM+  G    V  Y
Sbjct: 518 LCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 153/365 (41%), Gaps = 48/365 (13%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKE--------RYPNVREALI--------SLVFS 140
           + +CKM  +LGL  N      L     K+         Y N++ + I         L+  
Sbjct: 214 NLFCKMN-RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
           + N   V+ A +V   M   G    V  +N+++G +   K+ F + V +  ++ K G+ P
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK-FGEAVKLVHKVNKVGLSP 331

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N+ T N L+    +  +++SA+  F ++   G  P   T+  +I G      +  ++ ++
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM +  I      YT +I    R N  E+A  +  +M    L+PD  TY  L++ LC +
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVH 451

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
             + +A+ + + +  + L P   ++  ++ G C+ G    ++  L               
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN-------------- 497

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                           E +    + +  S+   I  LC +E+ ++A  LLG+M+ S + P
Sbjct: 498 ----------------EMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKP 541

Query: 441 DCATY 445
             + Y
Sbjct: 542 SVSLY 546


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 204/447 (45%), Gaps = 34/447 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F+ VL  I + K  +   + ++  M   GI  ++ + N ++  L   +R   AL    +M
Sbjct: 13  FSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P+  T   +I G    +RV D++ ++ +M ++G + ++  Y  II   C+   +
Sbjct: 72  MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A+ LF  M    +  D +TY  L+  LC + R  DA  ++ DM++  + P    F  +
Sbjct: 132 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 191

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           +    + GKF E++   E+       P                              D  
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDP------------------------------DVF 221

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC +  + +A ++L  MV    +PD  TY+  + G CK    ++  ++FR++
Sbjct: 222 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 281

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           + + LV D+I+Y+ +++G  Q  +   A E+F   S+     +  +++IL+YGLC+  +V
Sbjct: 282 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRV 338

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +KA+ L      S      +TY  ++ G+ K+   +D   +   +  +G   DV +Y  +
Sbjct: 339 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 398

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVP 615
           I     + +     L +  M + GL+P
Sbjct: 399 ISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 179/362 (49%), Gaps = 7/362 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ V+  M   G++  V   + ++    +  R F D + +  +M + G  P+V   N ++
Sbjct: 64  ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF-DAIDLVSKMEEMGFRPDVVIYNTII 122

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +   +   +  A++ F RM + G   ++ T+  ++ GL  + R  D+  ++ +M    I 
Sbjct: 123 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 182

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  +T +I +  +E K  EA++L++ M    + PD  TY  LIN LC + R+D+A  +
Sbjct: 183 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 242

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCN 385
           L+ M+  G  P    +  ++ G C+  + DE      +  + G V  T  +N +++    
Sbjct: 243 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 302

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           AG+   A+ I  +M  R   +  +++I +  LC N  + KA  L   M  S +  D  TY
Sbjct: 303 AGRPDAAQEIFSRMDSR--PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 360

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  + G CK+ N EDA  +FR +S + L  D +SY+ ++ G C+  +  ++  ++  M +
Sbjct: 361 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420

Query: 506 NG 507
           +G
Sbjct: 421 DG 422



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 173/420 (41%), Gaps = 33/420 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           ++ ++  + +    +  I LF  M    +  D  +Y  +INCLC   R   A  ++  M+
Sbjct: 13  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G  P       ++ G C+  +  ++++ +                             
Sbjct: 73  KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK--------------------------- 105

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            +E+M  R   D   +N  I   C+   +  A EL  RM    V  D  TY++ V G C 
Sbjct: 106 -MEEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 162

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
              + DA R+ R +  + +V + I+++ +++   +  K +EA++++  M++        +
Sbjct: 163 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 222

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LI GLC+  +VD+A ++  L  + G      TY  ++ G  K +R  +   +  +M 
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 282

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D   Y  +IQ   +  +       F+ M      P+  T   LL+GL    ++ 
Sbjct: 283 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 339

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                   +      LD + YNI+I+G+ K G    A  L   +  KG  PD  ++  ++
Sbjct: 340 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 399



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 106/262 (40%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+ S  +P    +S  +    K  NY+  + +F  +    +  D  SY+ ++  LC+  +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
              A+ V   M K G      + + LI G C   +V  AI L S     G       Y  
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           I+ G  K+    D + +  +M  +G   D   Y  L+  +    +  D A     MV   
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           +VP+  T  +++       +         ++       D   YN LINGL   G   +A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
            +LDLM+ KG +PD  T+  L+
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLI 262



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 8/163 (4%)

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G  +   +Y  ++  L +  R    L V+ +M+  G   DV     LI    + N++ D 
Sbjct: 40  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGS-QLHLVSSGI---NKLVSDSEVLDSSMYNI 657
               + M + G  PD    + + + + DGS ++ LV+  +   +++  D    D+  YN 
Sbjct: 100 IDLVSKMEEMGFRPD----VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 155

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           L+ GL   G  S A+ L+  M+ +  VP+  T   ++   V E
Sbjct: 156 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 198


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/525 (22%), Positives = 246/525 (46%), Gaps = 9/525 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A RVL  M   G + +   +N ++         + + V V+K+M   G++P VD  N  +
Sbjct: 137 AERVLEQMVEAGTRPNSITYNSLIHGYSISGM-WNESVRVFKQMSSCGVIPTVDNCNSFI 195

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA--NSRVDDSVSILGEMFDLG 267
             LF+  R   A   F  M  KG  P+  ++  ++ G     +S + D  +I   M   G
Sbjct: 196 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 255

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I      +  +I    R   +++A+ +F+ M+   ++PD +T+  +I+ LC   RLDDA 
Sbjct: 256 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 315

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-----HNALLEC 382
                M+ IG+ P++ V+  +++G C  G+  ++   + +       P      ++++  
Sbjct: 316 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 375

Query: 383 CCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+    K I++ M    +  +  ++N  +   C    + +A+ LL  M    + P+
Sbjct: 376 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 435

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
           C  Y   V G CK    +DAL VFR +  + +   S+ YS ++ GL Q  + T A ++F 
Sbjct: 436 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 495

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M ++G ++S  ++ +++ GLC     D+A  L    ++    +   T+  ++  + K+ 
Sbjct: 496 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 555

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R ++   +   +   G   +++ Y ++I ++ ++   ++    F  + K+G   D   + 
Sbjct: 556 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 615

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            ++  L + +++   S+ ++ +  ++  L++S  ++L +   +EG
Sbjct: 616 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/580 (21%), Positives = 234/580 (40%), Gaps = 79/580 (13%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P + T N L++     +R +  L    R+ K G  P+  ++ + I G + +  VD +  +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKAHCL 70

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G+  ++     II  LC+  ++++A  + + M    + PD  TY  +I+ LC+
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHN 377
           +  +D A  +LE M+  G  P    +  ++ G    G ++ESV   +    CG + +  N
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 378 --ALLECCCNAGKFFLAKCILEKM----------------------ADRKIADCDS---- 409
             + +      G+   AKCI + M                       D  +AD  +    
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 410 ------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                       +NI I        + KA  +   M    ++PD  T++  +   C++  
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 458 YEDALRVFRQ--------------------------VSAQSLVLDSIS----------YS 481
            +DAL  F                            V A+ L+ + ++          +S
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC+  ++ E  ++   M + G   +  +FN L+ G C++  +++A  L     S 
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       Y  ++ G  K  R  D L V   ML +G       Y I++  + +  +    
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ M+++G      T   +L GL   +     +  + KL + +   D   +NI+I+ 
Sbjct: 491 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 550

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           ++K G   +A  L D +   G VP+  T+ +++ + + EE
Sbjct: 551 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 590



 Score = 45.8 bits (107), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 163 KLSVDVFNVVLGAIV-----EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           K  +  FN+V+ A+      +E +   D +  Y      G+VPN+ T + ++  L +   
Sbjct: 538 KFDIITFNIVISAMFKVGRRQEAKELFDAISTY------GLVPNIQTYSMMITNLIKEES 591

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            E A + F  + K G   +SR    +++ L+  + V  + + L  + +  + LE S  + 
Sbjct: 592 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISL 651

Query: 278 IIPMLCRENKLEEAIRLF 295
           +  +  RE K  E I+L 
Sbjct: 652 LASLFSREGKYREHIKLL 669


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 204/447 (45%), Gaps = 34/447 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F+ VL  I + K  +   + ++  M   GI  ++ + N ++  L   +R   AL    +M
Sbjct: 72  FSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 130

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P+  T   +I G    +RV D++ ++ +M ++G + ++  Y  II   C+   +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A+ LF  M    +  D +TY  L+  LC + R  DA  ++ DM++  + P    F  +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           +    + GKF E++   E+       P                              D  
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDP------------------------------DVF 280

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC +  + +A ++L  MV    +PD  TY+  + G CK    ++  ++FR++
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           + + LV D+I+Y+ +++G  Q  +   A E+F   S+     +  +++IL+YGLC+  +V
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRV 397

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           +KA+ L      S      +TY  ++ G+ K+   +D   +   +  +G   DV +Y  +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVP 615
           I     + +     L +  M + GL+P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 179/362 (49%), Gaps = 7/362 (1%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ V+  M   G++  V   + ++    +  R F D + +  +M + G  P+V   N ++
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF-DAIDLVSKMEEMGFRPDVVIYNTII 181

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +   +   +  A++ F RM + G   ++ T+  ++ GL  + R  D+  ++ +M    I 
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  +T +I +  +E K  EA++L++ M    + PD  TY  LIN LC + R+D+A  +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCN 385
           L+ M+  G  P    +  ++ G C+  + DE      +  + G V  T  +N +++    
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           AG+   A+ I  +M  R   +  +++I +  LC N  + KA  L   M  S +  D  TY
Sbjct: 362 AGRPDAAQEIFSRMDSR--PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  + G CK+ N EDA  +FR +S + L  D +SY+ ++ G C+  +  ++  ++  M +
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479

Query: 506 NG 507
           +G
Sbjct: 480 DG 481



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 173/420 (41%), Gaps = 33/420 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           ++ ++  + +    +  I LF  M    +  D  +Y  +INCLC   R   A  ++  M+
Sbjct: 72  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G  P       ++ G C+  +  ++++ +                             
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK--------------------------- 164

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            +E+M  R   D   +N  I   C+   +  A EL  RM    V  D  TY++ V G C 
Sbjct: 165 -MEEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
              + DA R+ R +  + +V + I+++ +++   +  K +EA++++  M++        +
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LI GLC+  +VD+A ++  L  + G      TY  ++ G  K +R  +   +  +M 
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D   Y  +IQ   +  +       F+ M      P+  T   LL+GL    ++ 
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 398

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                   +      LD + YNI+I+G+ K G    A  L   +  KG  PD  ++  ++
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 4/205 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+     H RV+ A ++L  M + G    V  +N ++    + KR   +   +++EM +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR-VDEGTKLFREMAQ 342

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+V +  T N +++  F+  R ++A + F RM  +   PN RT+ I++ GL  N RV+ 
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEK 399

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +   M    I+L+++ Y  +I  +C+   +E+A  LF+ +    L PD ++Y  +I+
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459

Query: 316 CLCENLRLDDANDILEDMIVIGLTP 340
             C   + D ++ +   M   GL P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 37/274 (13%)

Query: 457 NYEDALRVFRQVSAQSLVLDSI-SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           N E+ + +F ++  QS  L SI  +SK++  + + +     + +F  M   G      S+
Sbjct: 49  NLEEEIDLFCKM-IQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           NI+I  LC   +   A+ +       G      T + ++ G  +  R  D + ++++M  
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL------AD 629
            G   DV  Y  +I    +   + D    F+ M + G+  D  T  SL+ GL      +D
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227

Query: 630 GSQLH-------------LVSSGINKLVSD---SEVL-------------DSSMYNILIN 660
            ++L                ++ I+  V +   SE +             D   YN LIN
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL   G   +A  +LDLM+ KG +PD  T+  L+
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 8/212 (3%)

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + E +++FC M ++    S   F+ ++  +   +  D  I L       G  +   +Y  
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++  L +  R    L V+ +M+  G   DV     LI    + N++ D     + M + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 613 LVPDRETMLSLLHGLADGS-QLHLVSSGI---NKLVSDSEVLDSSMYNILINGLWKEGLT 668
             PD    + + + + DGS ++ LV+  +   +++  D    D+  YN L+ GL   G  
Sbjct: 170 FRPD----VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           S A+ L+  M+ +  VP+  T   ++   V E
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/572 (23%), Positives = 258/572 (45%), Gaps = 34/572 (5%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V ++++G +++E   F  +  V +E+  + I  + +  + L+E   E    E A++ F  
Sbjct: 95  VQDLIIGKLIKEN-AFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGL 153

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M    C P+   F +++  L+       ++++  +M    +  ++  Y  +I  LC+  K
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            ++A+ LF  M    ++P+++ Y  +++ LC+  ++ DA  +   M   G       +  
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 348 IVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C+ G  D++   L+   K G++     +  L+     A ++  A    +KM    
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I  D   + I IR L +   + +A  LLG M    + PD   Y+A + G C +   ++A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++S      ++ +YS L+ G+C+   I +A  +F  M K GC  S  +FN LI GL
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   ++++A   R L Y        S + ++  G  K+     L V++ ++   G  L  
Sbjct: 454 CKANRLEEA---RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMIL-- 508

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
           +AY +L+Q                 +V +G++PD  T   L++G      ++       +
Sbjct: 509 KAYKLLMQ-----------------LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           +     + DS  Y  LI+GL++ G    A  + + M+ KG VP+++T+  ++  S  E  
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENN 611

Query: 703 DS------RRFAFDSSSFPDSVSDILAEGLGN 728
            S       ++  D   + D    ++AE   N
Sbjct: 612 ISLALSVWMKYLRDFRGWEDEKVRVVAESFDN 643



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 20/379 (5%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDT 204
           ++  A R+   M + G    +  +NV+L      K G+ D  F   +++ K G +  V  
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLITYNVLLNGFC--KSGYLDDAFTLLQLLTKDGHILGVIG 305

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
              L+  LF   R E A   +++M ++   P+   + I+I+GL    RV +++++LGEM 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + G++ +   Y  +I   C    L+EA  L   +   D  P+  TY  LI  +C+N  ++
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCC 384
            A  I ++M  +G  P+   F  ++ GLC+  + +E+   L  +   V  P         
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA-RLLFYQMEIVRKP--------- 475

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                FL    L +  D K+ D  S  + +  LCE+  I KAY+LL ++V S V+PD  T
Sbjct: 476 ---SLFLR---LSQGTD-KVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRT 528

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G CK  N   A ++F+++  +  + DS++Y  L++GL +  +  +A+E+F  M 
Sbjct: 529 YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV 588

Query: 505 KNGCSLSSSSFNILIYGLC 523
           K GC   SS++  ++   C
Sbjct: 589 KKGCVPESSTYKTIMTWSC 607



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 108/477 (22%), Positives = 200/477 (41%), Gaps = 40/477 (8%)

Query: 109 AGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           A   EE     Q M++E   P+V    I ++       RV  A+ +L  M   G +    
Sbjct: 316 ARRYEEAHMWYQKMLRENIKPDVMLYTI-MIRGLSQEGRVTEALTLLGEMTERGLRPDTI 374

Query: 168 VFNVVLGAIVEEKRGFADFVFVYK------EMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
            +N ++       +GF D  ++ +      E+ K    PN  T + L+  + +   I  A
Sbjct: 375 CYNALI-------KGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-----FDLGIQL------ 270
              F+ M K GC P+  TF  +I GL   +R++++  +  +M       L ++L      
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487

Query: 271 --ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             +++    ++  LC    + +A +L   +    ++PD  TY  LIN  C+   ++ A  
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFK 547

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCC 384
           + ++M + G  P    +  ++ GL   G+ ++++   E      C   +S +  ++   C
Sbjct: 548 LFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607

Query: 385 NAGKFFLAKCILEKMADRKIADCDSW-NIPIRWLCE---NEEIRKAYELLGRMVVSSVVP 440
                 LA  +  K     + D   W +  +R + E   NEE++ A   L  M + S   
Sbjct: 608 RENNISLALSVWMKY----LRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNF 663

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D A Y+ F++G  +     +A  +F  +    + + S S   L+  LC VE +  A++VF
Sbjct: 664 DLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVF 723

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
               + G  L     N L+  L  + + D A+ L +   +SG       + +  L L
Sbjct: 724 LFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASGYDLGAHLHYRTKLHL 780


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 220/486 (45%), Gaps = 8/486 (1%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           L  F+ M + G  P  +    V++ L   +R DD  ++  +M  LG++  +  Y  ++  
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 282 LCRENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
            C+  ++++A+ L K M  RA   +P+++TY  +IN L     L+ A  ++ D++ +   
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLSKK 297

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFL--EDKCGYVTS--PHNALLECCCNAGKFFLAKCI 395
            +   +  ++ GL      +++   L   +  G V +   +N L++     G    A+  
Sbjct: 298 ASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVK 357

Query: 396 LEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            ++M A   + D  ++N  I   C+   +++A  L G +  + + P   TY+  + G C+
Sbjct: 358 FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCR 417

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + E A R+  +++ +  + D  +Y+ L+ G C V  +      F  M   G      +
Sbjct: 418 LGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFA 477

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N  I     +  +  A +LR      G S  T TY  ++ GL K    KD  V+  +M+
Sbjct: 478 YNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMV 537

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G  LD   Y  LI +  E+ +L +    F+ MV +GL P   T    +H       L+
Sbjct: 538 TDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLY 597

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L      K++ +    +   YN+L++ L + G T  A      ML +G VP+  T+ LL+
Sbjct: 598 LAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLI 657

Query: 695 GSSVGE 700
             S  E
Sbjct: 658 DGSCKE 663



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 119/502 (23%), Positives = 208/502 (41%), Gaps = 42/502 (8%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N VL  + +  R + D   VY +M++ G+ P++ T N LL+   +  R++ A+   + M 
Sbjct: 198 NCVLRVLRDAAR-WDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDME 256

Query: 230 KK--GCCPNSRTFEIVIKGL----------------------------------IANSRV 253
            +  GC PN  T+ +VI GL                                  +A   V
Sbjct: 257 ARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFV 316

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           + + ++L EM + GI   +  Y  +I  L +    E A   F  MRA  L+PD +TY  L
Sbjct: 317 EKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSL 376

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDKC 369
           IN  C+   L  A  +  D+   GL PT   +  ++ G C +G  + +        E+ C
Sbjct: 377 INGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDC 436

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
                 +  L+   C      + +   ++M  + +  DC ++N  I        I  A++
Sbjct: 437 LPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQ 496

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L   M++  +  D  TY+  + G CK  + +DA  ++ ++    L LD ++Y+ L+   C
Sbjct: 497 LREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHC 556

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  ++ EA  +F  M  +G S S  ++ I I+  C    +  A          G      
Sbjct: 557 ERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEV 616

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  +M  L ++ R +       +ML  G   +   Y +LI    ++         +  M
Sbjct: 617 TYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEM 676

Query: 609 VKAGLVPDRETMLSLLHGLADG 630
            + G+ PD  T  +L  G  +G
Sbjct: 677 HQKGIHPDHCTHNALFKGFGEG 698



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 2/200 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +NV++  + +      D   ++ +MV  G+  +  T   L+    E  R+  A + F  
Sbjct: 512 TYNVLIDGLCKTG-SLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDG 570

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M   G  P+  T+ I I        +  +     +M + G++     Y  ++  LCR  +
Sbjct: 571 MVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGR 630

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            E A + F  M    L+P++ TY  LI+  C+      A  +  +M   G+ P       
Sbjct: 631 TESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNA 690

Query: 348 IVRGLCEVGKFDESVNFLED 367
           + +G  E G   ++V +LE+
Sbjct: 691 LFKGFGE-GHMYDAVQYLEN 709


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 157/690 (22%), Positives = 276/690 (40%), Gaps = 75/690 (10%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKM--ILKLG---- 107
           ++  R  L+PD ++ +L         +K F W   Q  + HT   Y  +  + + G    
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDR 188

Query: 108 --------LAGNVEEMEGLCQNMVKER---------------------YPNVREALISLV 138
                   + G+ +E+ G   N++  +                     Y   R    +LV
Sbjct: 189 VPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALV 248

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
             F+   +++ A  V   M+  G  LS+D F   LG   +       +      + K   
Sbjct: 249 QVFLRADKLDTAQLVHREMSELG--LSMDEF--TLGFFAQALCKVGKWREALSLIEKEDF 304

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VPN    N ++  L E +  E A+D   RM    C PN +T+ I++ G +   ++     
Sbjct: 305 VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKR 364

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           IL  M   G     + +  ++   C+ +    A +L K M   +  P  + Y  LI  +C
Sbjct: 365 ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424

Query: 319 ENLRLDD------ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG-- 370
               L        A     +M+  G        V   R LC  GKF+++   + +  G  
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484

Query: 371 YV--TSPHNALLECCCNAGK----FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           +V  TS ++ ++   CNA +    FFL K   E      + D  ++ I I    +   I+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFK---EMKGTGVVPDVYTYTILIDCFSKAGIIK 541

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+  L  MV     P   TY+  +    K      A  +F  + A+    + I+Y+ L+
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +G C+   I +A +++  M                 G   +  VD   ++++   +    
Sbjct: 602 DGYCKSGNIEKACQIYARMR----------------GDADIPDVDMYFKIKN---NVAEK 642

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL K  + KD   +L  M V+GC  +   Y  LI    +  KL +    
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ MV+ G  P+  T  SL+  L    +L LV   ++K++ +S   +  +Y  +I+GL K
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              T +A  L+ +M  KG  P+  T+  ++
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 196/470 (41%), Gaps = 36/470 (7%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  G  P+    N L+    +++    A    ++M K  C P    + I+I  + +   
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 428

Query: 253 VDDSVSI------LGEMFDLGIQLE----LSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +   V+         EM   G  L     +SF  C    LC   K E+A ++   M    
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARC----LCGFGKFEKAYKVIHEMMGNG 484

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +PD  TY E+I  LC   R+++A  + ++M   G+ P    +  ++    + G   ++ 
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 363 NFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWL 417
           N+L+    D C      +  L+     A K  +A  + E M A     +  ++   I   
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 418 CENEEIRKAYELLGRMVVSSVVPDC----------------ATYSAFVLGKCKLCNYEDA 461
           C++  I KA ++  RM   + +PD                  TY A V G CK    +DA
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             +   +       ++I Y  L++G C+  K+ EA EVF  M ++G + +  +++ LI  
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDR 724

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           L   +++D  +++ S    +  +     YT+++ GL K+ +  +   ++  M  +GC  +
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL-HGLADG 630
           V  Y  +I    +  K+  C   F  M   G  P+  T   L+ H  A G
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG 834



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 122/542 (22%), Positives = 222/542 (40%), Gaps = 100/542 (18%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +   A +V+  M   GF      ++ V+G +    R    F F++KEM   G+VP+V T 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF-FLFKEMKGTGVVPDVYTY 527

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++   +   I+ A +    M + GC P   T+  +I   +   +V    S+  E+F+
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV----SVANELFE 583

Query: 266 L----GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA------LDLM----------P 305
           L    G    +  YT +I   C+   +E+A +++  MR       +D+           P
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + +TY  L++ LC+  ++ DA D+LE M V G  P   V+  ++ G C+  K DE+    
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
                +  +P    +++L++      +  L   +L KM +   A +   +   I  L + 
Sbjct: 704 HKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            +  +AY+L+  M      P+  TY+A + G  K    +  L +FR++ ++    + ++Y
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 481 S-----------------------------------KLVEGLCQVEKITEAVEVFCCMSK 505
           +                                   K++EG  +  +   ++ +   + K
Sbjct: 824 TVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEK 881

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           NG     S+  IL+Y + +   V KA RL                       V L+  K+
Sbjct: 882 NG-----SAPIILLYKVLIDNFV-KAGRLE----------------------VALELHKE 913

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           ++     M     A     Y  LI S S  +K+      F  M++ G++PD  T + LL 
Sbjct: 914 VISASMSM-----AAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

Query: 626 GL 627
           GL
Sbjct: 969 GL 970



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 165/352 (46%), Gaps = 12/352 (3%)

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           +N V E+ PNV     +LV      ++V  A  +L  M   G + +  V++ ++    + 
Sbjct: 636 KNNVAEK-PNVV-TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            +   +   V+ +MV+ G  PNV T + L++ LF+  R++  L    +M +  C PN   
Sbjct: 694 AK-LDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI 752

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  +I GL   ++ D++  ++  M + G +  +  YT +I    +  K+++ + LF+ M 
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           +    P+ +TY  LIN  C    LD+A  +LE+M           +  ++ G     +F 
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFI 870

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP-- 413
            S+  LE+     ++P    +  L++    AG+  +A  + +++    ++     N+   
Sbjct: 871 LSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTS 930

Query: 414 -IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            I       +I  A+EL   M+   V+PD  T+   ++G  ++  +E+AL++
Sbjct: 931 LIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 9/291 (3%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N+ IR  C N     A E LGR+      P   TY+A V    +    + A  V R++S 
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
             L +D  +     + LC+V K  EA+ +   + K     ++  +N +I GLC     ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+   +   S+       TY  ++ G +  ++      +L+ M+ EGC      +  L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL------HLVSSGINKLV 644
           +  + +           M K    P       L+  +  G +L       L     N+++
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           S   VL+          L   G   +A  ++  M+G G+VPD +T+  ++G
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 157/690 (22%), Positives = 276/690 (40%), Gaps = 75/690 (10%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKM--ILKLG---- 107
           ++  R  L+PD ++ +L         +K F W   Q  + HT   Y  +  + + G    
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDR 188

Query: 108 --------LAGNVEEMEGLCQNMVKER---------------------YPNVREALISLV 138
                   + G+ +E+ G   N++  +                     Y   R    +LV
Sbjct: 189 VPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALV 248

Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGI 198
             F+   +++ A  V   M+  G  LS+D F   LG   +       +      + K   
Sbjct: 249 QVFLRADKLDTAQLVHREMSELG--LSMDEF--TLGFFAQALCKVGKWREALSLIEKEDF 304

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VPN    N ++  L E +  E A+D   RM    C PN +T+ I++ G +   ++     
Sbjct: 305 VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKR 364

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           IL  M   G     + +  ++   C+ +    A +L K M   +  P  + Y  LI  +C
Sbjct: 365 ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424

Query: 319 ENLRLDD------ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--G 370
               L        A     +M+  G        V   R LC  GKF+++   + +    G
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484

Query: 371 YV--TSPHNALLECCCNAGK----FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           +V  TS ++ ++   CNA +    FFL K   E      + D  ++ I I    +   I+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFK---EMKGTGVVPDVYTYTILIDCFSKAGIIK 541

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+  L  MV     P   TY+  +    K      A  +F  + A+    + I+Y+ L+
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +G C+   I +A +++  M                 G   +  VD   ++++   +    
Sbjct: 602 DGYCKSGNIEKACQIYARMR----------------GDADIPDVDMYFKIKN---NVAEK 642

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL K  + KD   +L  M V+GC  +   Y  LI    +  KL +    
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ MV+ G  P+  T  SL+  L    +L LV   ++K++ +S   +  +Y  +I+GL K
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              T +A  L+ +M  KG  P+  T+  ++
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 126/580 (21%), Positives = 235/580 (40%), Gaps = 38/580 (6%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           AM  L  M S     +V  + ++L   + +K+       +   M+  G  P+    N L+
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQ-LGRCKRILSMMIAEGCYPSYTIFNSLV 385

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI------LGEM 263
               +++    A    ++M K  C P    + I+I  + +   +   V+         EM
Sbjct: 386 HAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEM 445

Query: 264 FDLGIQLE----LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
              G  L     +SF  C    LC   K E+A ++   M     +PD  TY E+I  LC 
Sbjct: 446 LSAGTVLNKVNVVSFARC----LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 501

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSP 375
             R+++A  + ++M   G+ P    +  ++    + G   ++ N+L+    D C      
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVT 561

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +  L+     A K  +A  + E M  +    +  ++   I   C++  I KA ++  RM 
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 435 VSSVVPDC----------------ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
             + +PD                  TY A V G CK    +DA  +   +       ++I
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTI 681

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            Y  L++G C+  K+ EA EVF  M + G + +  +++ LI  L   +++D  +++ S  
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +  +     YT+++ GL K+ +  +   ++  M  +GC  +V  Y  +I    +  K+
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
             C   F  M   G  P+  T   L++       L    + + ++         S Y  +
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
           I G  +E + S    LL+ +   G  P    + +L+ + V
Sbjct: 862 IEGYKREFILSLG--LLEEVEKNGSAPTILLYKVLIDNFV 899



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 113/532 (21%), Positives = 205/532 (38%), Gaps = 104/532 (19%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +   A +V+  M   GF      ++ V+G +    R   +  F++KEM   G+VP+V T 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASR-VENAFFLFKEMKGTGVVPDVYTY 527

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++   +   I+ A +    M + GC P   T+  +I   +   +V    S+  E+F+
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV----SVANELFE 583

Query: 266 L----GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA------LDLM----------P 305
           L    G    +  YT +I   C+   +E+A +++  MR       +D+           P
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           + +TY  L++ LC+  ++ DA D+LE M V G  P   V+  ++ G C+  K DE+    
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-----------------KI 404
                   +P    +++L++      +  L   +L KM +                  K+
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 405 ADCD-------------------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           A  D                   ++   I    +  ++ K  EL   M      P+  TY
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG-----------LCQVEKIT 494
           +  +   C   + ++A  +  ++          SY K++EG           L +VEK  
Sbjct: 824 TVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNG 883

Query: 495 EA------------------VEVFCCMSKNGCSLSSSS------FNILIYGLCVMRKVDK 530
            A                  +EV   + K   S S S       +  LIY      K+D 
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDH 943

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           A  L       G      T+  +++GL++++R ++ L    Q+    C +D+
Sbjct: 944 AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEAL----QLSDSLCQMDI 991



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 165/352 (46%), Gaps = 12/352 (3%)

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           +N V E+ PNV     +LV      ++V  A  +L  M   G + +  V++ ++    + 
Sbjct: 636 KNNVAEK-PNVV-TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            +   +   V+ +MV+ G  PNV T + L++ LF+  R++  L    +M +  C PN   
Sbjct: 694 AK-LDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI 752

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  +I GL   ++ D++  ++  M + G +  +  YT +I    +  K+++ + LF+ M 
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           +    P+ +TY  LIN  C    LD+A  +LE+M           +  ++ G     +F 
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFI 870

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP-- 413
            S+  LE+     ++P    +  L++    AG+  +A  + +++    ++     N+   
Sbjct: 871 LSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTS 930

Query: 414 -IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            I       +I  A+EL   M+   V+PD  T+   ++G  ++  +E+AL++
Sbjct: 931 LIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 189/415 (45%), Gaps = 36/415 (8%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           AG V+     C     ER     + LI          R   A+ VL  M        V  
Sbjct: 141 AGQVDAARRWCAERAVERDAYTCDTLIR---GLCGRGRTANALAVLDEMLRRRCVPDVVT 197

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           + ++L A  + + G+   + +  EM   G  P++ T N ++  + +  R++ A++  + +
Sbjct: 198 YTILLEATCK-RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL 256

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              GC PN+ ++ IV+KGL    R +D+  ++GEM   G    +  +  +I  LCR+  +
Sbjct: 257 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 316

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           E A+ + + +      P+ L+Y  L++  C+  ++D A   L+ M+  G  P      DI
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP------DI 370

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC- 407
           V                          +N LL   C +G+  +A  +L ++ D+  A   
Sbjct: 371 VS-------------------------YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S+N  I  L +  + ++A ELL  MV   + PD  TYS    G C+    EDA+R F +
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           V    +  +++ Y+ ++ GLC+  +   A+++F  M  NGC  + S++ ILI GL
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 207/493 (41%), Gaps = 42/493 (8%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            +V +   P+  T   L++ L  + R   A     R     C P+   +  ++ G     
Sbjct: 88  RLVGSARRPDAGTCAALIKKLSASGRTAEA-----RRVLAACGPDVMAYNAMMAGYCGAG 142

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           +VD +     E       +E   YTC  +I  LC   +   A+ +   M     +PD +T
Sbjct: 143 QVDAARRWCAER-----AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVT 197

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L+   C+      A  +L++M   G TP    +  +V G+C+ G+ D+++ FL++  
Sbjct: 198 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 257

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
            Y   P+                                S+NI ++ LC  E    A EL
Sbjct: 258 SYGCEPNTV------------------------------SYNIVLKGLCTAERWEDAEEL 287

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           +G M      P+  T++  +   C+    E AL V  Q+       +S+SY+ L+   C+
Sbjct: 288 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCK 347

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
            +K+ +A+     M   GC     S+N L+  LC   +VD A+ L       G +    +
Sbjct: 348 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 407

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ GL K  + K+ L +L +M+ +G   D+  Y  +   +  +++++D    F  + 
Sbjct: 408 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 467

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G+ P+     +++ GL    + H        ++ +  + + S Y ILI GL  EGL  
Sbjct: 468 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 527

Query: 670 QASYLLDLMLGKG 682
           +A  LLD +  +G
Sbjct: 528 EARDLLDELCSRG 540



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 193/453 (42%), Gaps = 52/453 (11%)

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           L R  +L+EA+RL    R     PD  T   LI  L  + R  +A  +L         P 
Sbjct: 77  LVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPD 127

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKC----GYVTSPHNALLECCCNAGKFFLAKCILE 397
              +  ++ G C  G+ D +  +  ++      Y     + L+   C  G+   A  +L+
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTC---DTLIRGLCGRGRTANALAVLD 184

Query: 398 KMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M  R+ + D  ++ I +   C+    ++A +LL  M      PD  TY+  V G C+  
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK------------------------ 492
             +DA+   + + +     +++SY+ +++GLC  E+                        
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304

Query: 493 -----------ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
                      +  A+EV   + K GCS +S S+N L++  C  +K+DKA+    L  S 
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      +Y  ++  L +       + +L Q+  +GCA  + +Y  +I  +++  K K+ 
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 424

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
               N MV  GL PD  T  ++  GL    ++        K+       ++ +YN +I G
Sbjct: 425 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 484

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L K   T  A  L   M+G G +P+ +T+ +L+
Sbjct: 485 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 4/243 (1%)

Query: 128 PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           PNV     +++ SF+     V  A+ VL  +   G   +   +N +L A  ++K+     
Sbjct: 298 PNV--VTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAM 355

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            F+   MV  G  P++ + N LL  L  +  ++ A++   ++  KGC P   ++  VI G
Sbjct: 356 AFL-DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 414

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    +  +++ +L EM   G+Q ++  Y+ I   LCRE+++E+AIR F  ++ + + P+
Sbjct: 415 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 474

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            + Y  +I  LC+      A D+   MI  G  P +  +  ++ GL   G   E+ + L+
Sbjct: 475 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 534

Query: 367 DKC 369
           + C
Sbjct: 535 ELC 537



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 8/138 (5%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+ +L  M S G +  +  ++ +   +  E R   D +  + ++   GI PN    N ++
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDR-IEDAIRAFGKVQDMGIRPNTVLYNAII 482

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +     SA+D F  M   GC PN  T+ I+I+GL     + ++  +L E+   G +
Sbjct: 483 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEE 542

Query: 270 -------LELSFYTCIIP 280
                  ++++F T  +P
Sbjct: 543 ILLDVHLIDVAFLTTFLP 560


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/497 (22%), Positives = 216/497 (43%), Gaps = 22/497 (4%)

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPN 201
           NH  V+ A+     M       S+  FN +LG++V+     +   + +Y  +    I P+
Sbjct: 23  NHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPS 82

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
           + T N ++        ++ A     ++ K G  P++ T   +IKGL  N +V +++    
Sbjct: 83  IVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHD 142

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            +   G +L    Y  +I  LC+  +   A+++ + +    +  + + Y  +I+ LC+  
Sbjct: 143 HVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEK 202

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HN 377
            + +A ++   MIV  ++P    F  ++ G C VG+F E+     +      +P     N
Sbjct: 203 LVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFN 262

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
            L++  C  G     K +L  M                 + E  ++ KA  +   +    
Sbjct: 263 ILVDALCKEGSTKETKNVLAVM-----------------MKEVNQVNKAKHVFNIIGKRR 305

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           V PD  +Y+  +   CK+   ++AL +F ++  + +  D ++YS L++GLC+ E+I+ A 
Sbjct: 306 VTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAW 365

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           E+   M   G      ++   ++ LC   +VDKA+ L       G     +TY  ++ GL
Sbjct: 366 ELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K  R ++  V+   +L++G  + V  Y I+I  +  +    +       M   G  PD 
Sbjct: 426 CKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDV 485

Query: 618 ETMLSLLHGLADGSQLH 634
            T  +++  L    + H
Sbjct: 486 VTYETIIRALFKNDENH 502



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 212/467 (45%), Gaps = 26/467 (5%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCR--ENKLEEAIRLFKMMRALDLMPDELTY 310
           V D++S    M  +     +  +  I+  L +   N    AI L+  ++   + P  +T+
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC- 369
             +INC C    +D A  +L  ++ +G  P       +++GLC  GK  E+++F +    
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 370 -GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIR 424
            G+  +   +  L+   C  G+   A  +L K+ D K+ + +   ++  I  LC+ + + 
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKI-DGKLVNTNVVMYSTIIDSLCKEKLVT 205

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +AYEL  +M+V  V PD  T+SA + G C +  +++A  +F ++   ++  D  +++ LV
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV 265

Query: 485 EGLC-----------------QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           + LC                 +V ++ +A  VF  + K   +    S+ I+I  LC ++ 
Sbjct: 266 DALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKM 325

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           VD+A+ L +     G +    TY+ ++ GL K +R      +L QM   G   DV  Y  
Sbjct: 326 VDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTS 385

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
            + ++ + +++         +   G+ P+  T   L+ GL    +          L+   
Sbjct: 386 FLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKG 445

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +    YNI+INGL  EGL  +A  LL+ M   G  PD  T+  ++
Sbjct: 446 YKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETII 492



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 160/353 (45%), Gaps = 25/353 (7%)

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            A++VL  ++      +V +++ ++ ++ +EK    +   +Y +M+   + P+V T + L
Sbjct: 171 AALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKL-VTEAYELYSQMIVKKVSPDVVTFSAL 229

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----- 263
           +       + + A   F  M      P+  TF I++  L       ++ ++L  M     
Sbjct: 230 IYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVN 289

Query: 264 --------FDL----GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
                   F++     +  ++  YT II  LC+   ++EA+ LF  MR   + PD++TY 
Sbjct: 290 QVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYS 349

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDESVNFLEDKCG 370
            LI+ LC++ R+  A ++L+ M   G  P D + +   +  LC+  + D++V  ++    
Sbjct: 350 SLIDGLCKSERISHAWELLDQMHARG-QPADVITYTSFLHALCKNHQVDKAVALVKKIKD 408

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
               P    +N L++  C  G+F  A+ I + +  +       ++NI I  LC      +
Sbjct: 409 QGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDE 468

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           A  LL +M  +   PD  TY   +    K      A ++ R++ A+ L+ + +
Sbjct: 469 AMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 222/466 (47%), Gaps = 14/466 (3%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
            C PN+ ++ ++++ L A+   D +V +L  M   G++ ++  Y  +I  LC   ++++A
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           + L   M    + P+ + Y  L+   C++ R +D   +  +M   G+ P   ++  ++  
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 352 LCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-D 406
           LC+VGK  ++   ++        P    +N L+ C C  G    A  +L+KM+++ +A D
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSS--VVPDCATYSAFVLGKCKLCNYEDALRV 464
             ++N  I+ L +  E+ +A  LL  MV     V P+  T+++ + G C +     A +V
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
              +     +++ ++Y+ L+ GL +V K+ +A+E+   M+  G    S +++ILI G C 
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALD 581
           M +VD+A  L S     G       Y  +++ + +   ++RA++L       +     LD
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF----NEMDNNFPLD 465

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           V AY  +I    +   LK        +V  GL PD  T   +++  A    +   +  + 
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           ++ +   + D ++++ LI G   +G  ++   L+  M+ K    D+
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 212/433 (48%), Gaps = 17/433 (3%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDL------MPDELTYEELINCLCENLRLDDAND 328
           Y  ++  LCR    +   R   ++RA+ L       P+ ++Y  L+  LC +   D A  
Sbjct: 80  YNTVLTALCRRGHHD---RAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVG 136

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           +L  M   G+      +  ++RGLC+  + D++V  + + C     P    +++LL+  C
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            +G++     +  +M+++ I  D   +   I  LC+  + +KA+ ++  MV   + P+  
Sbjct: 197 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV 256

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY+  +   CK  + ++A+ V +++S + +  D ++Y+ L++GL  V ++ EA+ +   M
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 504 --SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
              KN    +  +FN +I GLC + ++ +A ++R++   +G      TY  ++ GL+++ 
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           + +  + ++ +M   G   D   Y ILI+   +  ++       + M   G+ P+    +
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            LL  + +   +    +  N++  ++  LD   Y+ +I+G  K G    A  LL  ++ +
Sbjct: 437 PLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 682 GWVPDATTHGLLV 694
           G  PDA T+ +++
Sbjct: 496 GLTPDAVTYSIVI 508



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 123/550 (22%), Positives = 249/550 (45%), Gaps = 55/550 (10%)

Query: 128 PNVREAL-----ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           P+VR+A+     ++ +    +H R    +R +        + +   + V++ A+  ++  
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADR-- 129

Query: 183 FAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            AD  V + + M  AG+  +V T   L+  L +   ++ A++    M + G  PN   + 
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +++G   + R +D   +  EM + GI+ ++  YT +I  LC+  K ++A  +  MM   
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            L P+ +TY  LINC+C+   + +A  +L+ M   G+ P    +  +++GL +V + DE+
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 362 VNFLED--KCGYVTSPH----NALLECCCNAGKF---FLAKCILEKMADRKIADCDSWNI 412
           +  LE+  +   +  P+    N++++  C+ G+    F  + ++E+     + +  ++N+
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG--CMVNLVTYNL 367

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  L    ++RKA EL+  M    + PD  TYS  + G CK+   + A  +   +  + 
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           +  +   Y  L+  +C+   +  A  +F  M  N   L   +++ +I+G C      KA 
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMIHGAC------KAG 480

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            L++                          AK+L   L  ++ EG   D   Y I+I   
Sbjct: 481 DLKT--------------------------AKEL---LKSIVDEGLTPDAVTYSIVINMF 511

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
           ++   ++        M  +G +PD     SL+ G +   +++ V   I ++++ +  LDS
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571

Query: 653 SMYNILINGL 662
            + + L   L
Sbjct: 572 KIISTLSTSL 581



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 216/531 (40%), Gaps = 57/531 (10%)

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMR 152
           A +Y  ++  L   G+ +    L + M  E +P  R   +S   L+ +       + A+ 
Sbjct: 77  AVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVG 136

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK------EMVKAGIVPNVDTLN 206
           +L +M S G +  V  +  ++       RG  D   V K      EM ++GI PNV   +
Sbjct: 137 LLRSMRSAGVRADVVTYGTLI-------RGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            LL+   ++ R E     F  M +KG  P+   +  +I  L    +   +  ++  M   
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  +  Y  +I  +C+E  ++EAI + K M    + PD +TY  LI  L + L +D+A
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 327 NDILEDMIVIG--LTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALL 380
             +LE+M+     + P    F  +++GLC++G+  ++        E  C      +N L+
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                  K   A  ++++M    +  D  +++I I+  C+  ++ +A +LL  M    + 
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 440 P----------------------------------DCATYSAFVLGKCKLCNYEDALRVF 465
           P                                  D   YS  + G CK  + + A  + 
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           + +  + L  D+++YS ++    +   +  A  V   M+ +G     + F+ LI G    
Sbjct: 490 KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTK 549

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            +++K + L     +   +  +   + +   LV     K LL  L     E
Sbjct: 550 GEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAE 600



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 65/403 (16%)

Query: 312 ELINCLCENLRL---DDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDESVNFLED 367
           E   CL  +LRL    +A  +L+ +  +     D V +  ++  LC  G  D +   L  
Sbjct: 47  EAAACLNRHLRLLPLGEATSLLDALPSV----RDAVSYNTVLTALCRRGHHDRAGALLR- 101

Query: 368 KCGYVTSPHNALLECCCNAGKF--FLAKCILEKMADRKI------------ADCDSWNIP 413
                  PH A   C  NA  +   +     +++AD+ +            AD  ++   
Sbjct: 102 --AMSLEPHPA---CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           IR LC+  E+ KA EL+G M  S + P+   YS+ + G CK   +ED  +VF ++S + +
Sbjct: 157 IRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGI 216

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D + Y+ L++ LC+V K  +A  V   M + G   +  ++N+LI  +C    V +AI 
Sbjct: 217 EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                                              VL +M  +G A DV  Y  LI+ +S
Sbjct: 277 -----------------------------------VLKKMSEKGVAPDVVTYNTLIKGLS 301

Query: 594 EQNKLKDCALFFNVMVKAGLV--PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +  ++ +       MV+   +  P+  T  S++ GL D  ++         +     +++
Sbjct: 302 DVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVN 361

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              YN+LI GL +     +A  L+D M   G  PD+ T+ +L+
Sbjct: 362 LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 156/621 (25%), Positives = 249/621 (40%), Gaps = 111/621 (17%)

Query: 77  SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS 136
           S AL+ F W   +  F H   +Y  M+  LG A N+                      ++
Sbjct: 100 SKALQFFNWAP-ELGFTHNDQSYFLMLEILGRARNLN---------------------VA 137

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVK 195
             F F    R NG +           KL    FN ++ +    K G F + V V+  M  
Sbjct: 138 RNFLFSIKRRSNGTV-----------KLEDRFFNSLIRSY--GKAGLFQESVQVFNSMKS 184

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVD 254
            G+ P+V T N LL +L +  R   A   F  M    G  P++ TF I+I+G   NS VD
Sbjct: 185 VGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVD 244

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RALDLMPDELTYEE 312
           +      EM       +L  Y  ++  LCR  K+  A  +   M  ++ +L PD +TY  
Sbjct: 245 EGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTT 304

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+   C    +D+A  + E+M+  GL P +  +  +++GLCEV K D+     E   G  
Sbjct: 305 LVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALG-- 362

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                         G F    C L  + +   A C++ N           +  A E+  +
Sbjct: 363 -------------GGGFIPDTCTLNTLMN---AHCNAGN-----------LNDALEVFEK 395

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS-------ISYSKLVE 485
           M+V +V PD ATYS  +   C+  N+E A ++F ++S + ++L          +Y  + E
Sbjct: 396 MMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFE 455

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC+  K  +A  VF  + K G      SF ILI G C           R   + +G   
Sbjct: 456 FLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHC-----------REGTFEAGY-- 501

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
                              +LLV+   ML      D+E Y  LI  + ++ +        
Sbjct: 502 -------------------ELLVL---MLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTL 539

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M+K+  VP+  T  S+L  L      H  +  I  ++      + ++    +  L+  
Sbjct: 540 EKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGS 599

Query: 666 GLTSQASYLLDLMLGKGWVPD 686
           GL  +A  ++ L+   G+V D
Sbjct: 600 GLRDKAFKIVGLLYANGYVVD 620



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 167/411 (40%), Gaps = 28/411 (6%)

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILE 397
           D  F  ++R   + G F ESV           SP     N+LL      G+  +A+ + +
Sbjct: 156 DRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFD 215

Query: 398 KMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +M        D  ++NI IR  C+N  + + +     M      PD  TY+  V G C+ 
Sbjct: 216 EMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRA 275

Query: 456 CNYEDALRVFRQVSAQSLVL--DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                A  V   +  +S  L  D ++Y+ LV G C   +I EA+ VF  M   G   +  
Sbjct: 276 GKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEI 335

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT-TSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           ++N LI GLC ++K+DK  ++   A   G     T T   +M          D L V  +
Sbjct: 336 TYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEK 395

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA-------GLVPDRETMLSLLH 625
           M+V     D   Y +LI+++ ++   +     F+ + +        G  P      S+  
Sbjct: 396 MMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFE 455

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            L    +         +L+      D   + ILI G  +EG       LL LML + +VP
Sbjct: 456 FLCRNGKTAKAERVFRQLMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVP 514

Query: 686 DATTH-----GL------LVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEG 725
           D  T+     GL      LV     E++       ++S+F   ++ +LA+G
Sbjct: 515 DLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKG 565


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 139/579 (24%), Positives = 247/579 (42%), Gaps = 52/579 (8%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDT 204
           RV   ++++      G    V  +NV++      +RG     + +  EM   G +P + T
Sbjct: 219 RVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC--RRGDMGRGLLLLGEMEAKGFLPTLVT 276

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
              L+  L +   +E     F  M K+G  PN + +  VI  L        ++ IL +MF
Sbjct: 277 YGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMF 336

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G   ++  +  +I  LC E  + +A    +     +L P++L+Y  LI+  C    L 
Sbjct: 337 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 396

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCC 384
            A+D+L +M+  G TP    F  ++ GL   GK  E++                      
Sbjct: 397 AASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL---------------------- 434

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                     + EKM +R++  D + +N+ I  LC+   +  A  +L  M+  +V PD  
Sbjct: 435 ---------IVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEF 485

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y+  + G  +  N  DA ++F  +  + +  D +S + +++G CQ   ++EA+     M
Sbjct: 486 VYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNM 545

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            K GC     ++  +I G      ++ A+R               TY+ ++ G  K    
Sbjct: 546 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 605

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
                + A M  E  + +V  Y ILI S+ +++K+    L+F  M+     P+  T+  L
Sbjct: 606 DSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYL 665

Query: 624 LHGLA------------DGSQLHLVSSGI---NKLVSDSEVLDSSMYNILINGLWKEGLT 668
           ++GL             + S++H   + +    KLV D     +S YN +I  L +  + 
Sbjct: 666 VNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNML 725

Query: 669 SQASYLLDLMLGKGWVPDATTH-GLLVG-SSVGEEIDSR 705
            +A    + M  KG+VP+  T   LL G  SVG+ ++ R
Sbjct: 726 REALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWR 764



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/501 (21%), Positives = 203/501 (40%), Gaps = 32/501 (6%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G +P V   N LL++L E  R + A   +  M  +    ++ +  ++++GL    RV++ 
Sbjct: 164 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 223

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + ++   +  G    + FY  +I   CR   +   + L   M A   +P  +TY  LINC
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           L +   L+    +  +M   GL+P   ++  ++  LC              KC   T   
Sbjct: 284 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALC--------------KCWSATQ-- 327

Query: 377 NALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                          A  IL++M A     D  ++N  I  LC    +RKA   L   + 
Sbjct: 328 ---------------AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIR 372

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P+  +Y+  + G C       A  +  ++  +    D +++  L+ GL    K++E
Sbjct: 373 RELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSE 432

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+ V   M++       + +N+LI GLC    +  A  +               Y  ++ 
Sbjct: 433 ALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLID 492

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G ++ +   D   +   M  +G   D+ +   +I+   +   + +  L  + M K G +P
Sbjct: 493 GFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP 552

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  +++ G A    L+     +  ++      +   Y+ LING  K G T  A  L 
Sbjct: 553 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLF 612

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             M  +   P+  T+ +L+GS
Sbjct: 613 ANMQAEALSPNVVTYTILIGS 633



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 84/418 (20%), Positives = 165/418 (39%), Gaps = 27/418 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+  +I  L   G+V + E   +  ++      + +   L+  F     +  A  +L+ M
Sbjct: 346 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM 405

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G    V  F  ++  +V   +  ++ + V ++M +  + P+V+  N L+  L + + 
Sbjct: 406 MGRGHTPDVVTFGALIHGLVVAGK-VSEALIVREKMTERQVFPDVNIYNVLISGLCKKHM 464

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +A +    M +K   P+   +  +I G I +  + D+  I   M   G++ ++     
Sbjct: 465 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNA 524

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C+   + EAI     MR +  +PDE TY  +I+   +   L+ A   L DMI   
Sbjct: 525 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 584

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             P    +  ++ G C+ G  D +     +      SP    +  L+       K   A 
Sbjct: 585 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 644

Query: 394 CILEKMADRKIADCDSWNIPIRWL----------------CENEEIRKAYELL---GRMV 434
              E M    +  C   ++ + +L                C   E+     LL    ++V
Sbjct: 645 LYFETML---LNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLV 701

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
                P  + Y+A +   C+     +AL    +++ +  V + I++  L+ G C V K
Sbjct: 702 FDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 122/279 (43%), Gaps = 14/279 (5%)

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           ++DA +++ ++  +    D+ S   LV GLC   ++ E +++       GC      +N+
Sbjct: 185 WDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNV 244

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI G C    + + + L     + G   T  TY  ++  L K    + +  +  +M   G
Sbjct: 245 LIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRG 304

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL---- 633
            + +V+ Y  +I ++ +        +    M  +G  PD  T  +L+ GL     +    
Sbjct: 305 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 364

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT---- 689
           H +   I + ++ +++     Y  LI+G    G    AS LL  M+G+G  PD  T    
Sbjct: 365 HFLREAIRRELNPNQL----SYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 420

Query: 690 -HGLLVGSSVGEEIDSRRFAFDSSSFPD-SVSDILAEGL 726
            HGL+V   V E +  R    +   FPD ++ ++L  GL
Sbjct: 421 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 459


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 210/482 (43%), Gaps = 19/482 (3%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           + ++   ++Y +M  +GI P+  TLN LL  L   NR+   L     + ++G  P+  T+
Sbjct: 110 KHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTY 169

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM-- 298
             +IKGL    R+  +  +   M  LG       Y  ++  LCR   +  A++L + M  
Sbjct: 170 TTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLN 229

Query: 299 ----RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
                 ++  P  ++Y  +I+ LC++ R D+A D+ E+M V G+TPT   +  ++     
Sbjct: 230 DSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM----- 284

Query: 355 VGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
              ++E+     +       P+    N L++  C  GK   AK +LE M  R I  +  +
Sbjct: 285 ---WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 341

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I   C   ++  A EL   M      PD   Y+  + G CK    E+A++++  + 
Sbjct: 342 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 401

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 D  +Y  L+ GL Q  K+ +A ++F  M   G       + I + GLC    + 
Sbjct: 402 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 461

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +A+ L +   S         +  ++ GL K  + +    +  ++  E    DV  Y I+I
Sbjct: 462 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 521

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
                  ++    + F  M K G  PD+ T  +L+ G  +  +L  V   ++ +V     
Sbjct: 522 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581

Query: 650 LD 651
           LD
Sbjct: 582 LD 583



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/508 (22%), Positives = 202/508 (39%), Gaps = 44/508 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+ +   P + +  +LL  L +          + +M   G  P+  T  I++  L   +R
Sbjct: 87  MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V + ++++  +   G   ++  YT +I  LC E+++ +A  LF  M+ L   P+ +TY  
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGT 206

Query: 313 LINCLCENLRLDDANDILEDMI------VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           L+  LC    +  A  + ++M+       I   P    +  I+  LC+  + DE      
Sbjct: 207 LMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDE------ 260

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
                                    A+ + E+M  + +         + W        +A
Sbjct: 261 -------------------------ARDLFEEMKVQGMTPTVISYTSLMW-------EEA 288

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             L   MV   V P+  T++  +   CK     +A  +   +  + +V + ++Y+ L+EG
Sbjct: 289 KRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 348

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C V  +  A E+F  M   GC      + +LI G C   KV++A++L +     G    
Sbjct: 349 FCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 408

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ GL +  +  D   +   M V G   D+  Y I +  + +   L +    FN
Sbjct: 409 VKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 468

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            +    +  D E    L+ GL    +L        KL  +    D   YNI+I+   + G
Sbjct: 469 KLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGG 528

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +A+ L   M   G  PD  T+  L+
Sbjct: 529 QVVKANILFQKMEKNGCTPDKITYATLI 556



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 211/487 (43%), Gaps = 55/487 (11%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD--VFNVVLGAIVEEKRGFADFVFVYKEM 193
           S VF   N  R++G              +S D    N++L  +    R   + + V   +
Sbjct: 113 SQVFYLYNQMRLSG--------------ISPDCCTLNILLNCLCNVNR-VGEGLAVMAGI 157

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           ++ G +P++ T   L++ L   +RI  A   F RM K GC PN+ T+  ++KGL     +
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217

Query: 254 DDSVSILGEMFDLGIQLELSF------YTCIIPMLCRENK-------------------- 287
             ++ +  EM +      ++F      Y+ II  LC++ +                    
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277

Query: 288 -------LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                   EEA RLF  M    + P+ +T+  LI+ LC+  ++ +A D+LE MI  G+ P
Sbjct: 278 ISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 337

Query: 341 TDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
               +  ++ G C VG  + +    V+     C      +  L+   C   K   A  + 
Sbjct: 338 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 397

Query: 397 EKMAD-RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             M    K  D  ++   +  L +  ++  A +L G M V  +  D   Y  F+ G CK 
Sbjct: 398 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 457

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               +A+ +F ++ + ++ LD   ++ L++GLC+  K+  A E+F  + +        ++
Sbjct: 458 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 517

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           NI+I+  C   +V KA  L      +G +    TY  ++ G  + ++ + ++ +L  M+ 
Sbjct: 518 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577

Query: 576 EGCALDV 582
              +LDV
Sbjct: 578 RDVSLDV 584



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 134/294 (45%), Gaps = 15/294 (5%)

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A++    M+ S+  P  ++++  + G  K+ +Y     ++ Q+    +  D  + + L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
             LC V ++ E + V   + + G      ++  LI GLC+  ++ KA  L +     G +
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE------AYCILIQSMSEQNKL 598
               TY  +M GL +       L +  +ML +     +       +Y I+I ++ +  + 
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
            +    F  M   G+ P   +  SL+    +  +L       N++V+     +   +N+L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLM--WEEAKRL------FNEMVNQGVQPNVVTFNVL 310

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS 711
           I+ L KEG   +A  LL++M+ +G VP+  T+  L+ G  +  +++S R  F S
Sbjct: 311 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVS 364



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 7/138 (5%)

Query: 141 FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           F+N    NG    AM +   + S   KL ++ FN ++  +   K G  +  + +++++ +
Sbjct: 450 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC--KAGKLETAWELFEKLPQ 507

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             + P+V T N ++       ++  A   F++M K GC P+  T+  +I+G   + +++ 
Sbjct: 508 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 567

Query: 256 SVSILGEMFDLGIQLELS 273
            V +L  M    + L+++
Sbjct: 568 VVELLHMMVQRDVSLDVN 585


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/515 (22%), Positives = 227/515 (44%), Gaps = 56/515 (10%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + PN  T   ++  L     I  AL     M  +GC        ++++          +V
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
             L  +   G  L+      ++  +C +  ++E + L + + +    PD ++Y  ++  L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 318 CENLRLDDANDILEDMIVI----------GLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           C   R DD  +++ +M+ +          G TP   ++  I+ G+C+ G  + + + L  
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCE 419
              Y   P    +N +L+  C+A ++  A+ +L +M      DC     ++NI + + C+
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE---DCPLDDVTFNILVDFFCQ 340

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N  + +  ELL +M+    +PD  TY+  + G CK    ++A+ + + +SA     ++IS
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 400

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ +++GLC+ E+  +A E+   M + GC  +  +FN LI  +C     ++AI L     
Sbjct: 401 YTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIEL----- 455

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                                         L QMLV GC+ D+ +Y  +I  + +  K +
Sbjct: 456 ------------------------------LKQMLVNGCSPDLISYSTVIDGLGKAGKTE 485

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +     NVM+  G+ P+     S+   L+   +   +    + +   +   D+++YN +I
Sbjct: 486 EALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVI 545

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + L K   T +A      M+  G +P+ +T+ +L+
Sbjct: 546 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 580



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 207/464 (44%), Gaps = 16/464 (3%)

Query: 181 RGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           RG  AD + V  EM   G        + +LE         SA+   + +H KGC  +S  
Sbjct: 121 RGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGN 180

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC---RENKLEE-AIRLF 295
             +V+  +     VD+ V +L ++   G + ++  Y  ++  LC   R + +EE  + + 
Sbjct: 181 CNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV 240

Query: 296 KMMRALDLMP------DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           ++  AL  MP      D   Y  +I+ +C++   + ANDIL  M   GL P    +  ++
Sbjct: 241 RVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 300

Query: 350 RGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-I 404
           +GLC   +++E+ + L    ++ C       N L++  C  G       +LE+M +   I
Sbjct: 301 KGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCI 360

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++   I   C+   + +A  LL  M      P+  +Y+  + G C+   + DA  +
Sbjct: 361 PDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQEL 420

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
              +  Q  + + ++++ L+  +C+     +A+E+   M  NGCS    S++ +I GL  
Sbjct: 421 ISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 480

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             K ++A+ L ++  + G +  T  Y+ +   L +  R   ++ +   +       D   
Sbjct: 481 AGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAAL 540

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           Y  +I S+ ++ +      FF  MV  G +P+  T   L+ GLA
Sbjct: 541 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLA 584



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/466 (22%), Positives = 199/466 (42%), Gaps = 21/466 (4%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
            S     +I+ L A  R  D+   L    D      +  Y  +I   CR  ++  A    
Sbjct: 43  GSGRLSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQVAAAR--- 96

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           ++  A+ + P+  TY  ++  LC    + DA  +L++M + G   T  +   I+   C  
Sbjct: 97  RLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRG 156

Query: 356 GKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSW 410
           G F  +V  L+      C   +   N ++   C  G       +L K+       D  S+
Sbjct: 157 GGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSY 216

Query: 411 NIPIRWLCENE----------EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           N  ++ LC  +          E+ + +E L +M      PD   Y+  + G CK  ++E 
Sbjct: 217 NAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 276

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  +  ++ +  L  + + Y+ +++GLC  E+  EA ++   M +  C L   +FNIL+ 
Sbjct: 277 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 336

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
             C    VD+ I L       G      TYT ++ G  K     + +++L  M   GC  
Sbjct: 337 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 396

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +  +Y I+++ +    +  D     + M++ G +P+  T  +L++ +            +
Sbjct: 397 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELL 456

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            +++ +    D   Y+ +I+GL K G T +A  LL++M+ KG  P+
Sbjct: 457 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 502



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 177/409 (43%), Gaps = 46/409 (11%)

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           ++GLC   + +R+ +V E ++ +V       RV+ A   L  M   G    + ++  ++ 
Sbjct: 220 LKGLC---MAKRWDDVEELMVEMV-------RVHEA---LSQMPEHGCTPDLRMYATIID 266

Query: 175 AIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            I   K G  +    +   M   G+ PNV   N +L+ L    R E A D    M ++ C
Sbjct: 267 GIC--KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 324

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
             +  TF I++     N  VD  + +L +M + G   ++  YT +I   C+E  ++EA+ 
Sbjct: 325 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 384

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L K M A    P+ ++Y  ++  LC   R  DA +++  MI  G  P    F  ++  +C
Sbjct: 385 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 444

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
           + G  ++++  L+       SP                              D  S++  
Sbjct: 445 KKGLAEQAIELLKQMLVNGCSP------------------------------DLISYSTV 474

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  L +  +  +A ELL  M+   + P+   YS+      +    +  +++F  +   ++
Sbjct: 475 IDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATV 534

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             D+  Y+ ++  LC+  +   A++ F  M  NGC  + S++ ILI GL
Sbjct: 535 RSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 583



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 118 LCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
            CQN + +R   + E ++            +++  F     V+ A+ +L NM++ G K +
Sbjct: 338 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 397

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              + +VL  +   +R + D   +   M++ G +PN  T N L+  + +    E A++  
Sbjct: 398 TISYTIVLKGLCRAER-WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELL 456

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M   GC P+  ++  VI GL    + ++++ +L  M + GI      Y+ +   L RE
Sbjct: 457 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 516

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            + ++ I++F  ++   +  D   Y  +I+ LC+    D A D    M+  G  P +  +
Sbjct: 517 GRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 576

Query: 346 VDIVRGLCEVGKFDESVNFLEDKC 369
             ++RGL   G   E+ + L + C
Sbjct: 577 TILIRGLASEGLVREAQDLLSELC 600



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 131/328 (39%), Gaps = 15/328 (4%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           +AL+   C AG+   A   L+   D   A   ++N  I   C   ++  A  L   + V 
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGD--AAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP 105

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              P+  TY   V   C      DAL V  ++  +           ++E  C+      A
Sbjct: 106 ---PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           V     +   GC+L S + N+++  +C    VD+ + L     S G      +Y  ++ G
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222

Query: 557 LVKLQRAKD---LLV-------VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
           L   +R  D   L+V        L+QM   GC  D+  Y  +I  + +    +      +
Sbjct: 223 LCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS 282

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   GL P+     ++L GL    +       + ++  +   LD   +NIL++   + G
Sbjct: 283 RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNG 342

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L  +   LL+ ML  G +PD  T+  ++
Sbjct: 343 LVDRVIELLEQMLEHGCIPDVITYTTVI 370


>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 202/441 (45%), Gaps = 13/441 (2%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
           +  I      L+P +L  ++   +D   +L+IF          H       + LKL  A 
Sbjct: 44  QPPIYPWPRRLTPHNLASLISRQHDPDLSLQIFH--HAHPSLSHAPQPLHALFLKLSRAR 101

Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
               +E L  ++           L +L+ ++    +   A+R+ +        L V   N
Sbjct: 102 RFYHLESLLTHLPNP---PPEPPLTTLIRAYGLAGKPLSALRIFLKFQP----LGVRSLN 154

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
            +L A+V+ KR             K  +VPNV + N LL+ L + N ++ A+     M  
Sbjct: 155 ALLNALVQNKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSL 214

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            G  PN  ++  V+ G +    ++ ++ + GE+ D G   +++ YT ++   CR  KL +
Sbjct: 215 MGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVD 274

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           AIR+  +M    + P E+TY  +I   C+  +  +A ++LEDM+  GL P+  +   +V 
Sbjct: 275 AIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVD 334

Query: 351 GLCEVGKFDESVNFLED--KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIAD 406
            LCE G  + +        + G+       + ++   C  GK   A+ +L+++   ++A 
Sbjct: 335 LLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDELEKGEVAS 394

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I  +CE  ++ +A  L   MV    VP+  TY+  + G CK+ + ++A+RV  
Sbjct: 395 LMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLE 454

Query: 467 QVSAQSLVLDSISYSKLVEGL 487
           ++     + +  ++S LV+G+
Sbjct: 455 EMVESGCLPNKSTFSILVDGI 475



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 155/334 (46%), Gaps = 8/334 (2%)

Query: 377 NALLECCCNAGKFFLAKCILEKMAD--RKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           NALL       +  LA  + +   +  R + +  S NI ++ LC+  E+  A  +L  M 
Sbjct: 154 NALLNALVQNKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMS 213

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
           +  +VP+  +YS  + G     + E A+RVF ++  +  + D  SY+ L+ G C++ K+ 
Sbjct: 214 LMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLV 273

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A+ +   M +N    S  ++ ++I   C  RK  +A+ L       G   ++    K++
Sbjct: 274 DAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVV 333

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
             L +    +    V   ++ +G  +       ++  + ++ K+ +     + + K G V
Sbjct: 334 DLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDELEK-GEV 392

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
               T  +L+ G+ +  QL       +++V    V ++  YN+L+ G  K G   +A  +
Sbjct: 393 ASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRV 452

Query: 675 LDLMLGKGWVPDATTHGLLV-GSSVG----EEID 703
           L+ M+  G +P+ +T  +LV G S+     EEID
Sbjct: 453 LEEMVESGCLPNKSTFSILVDGISLSGGKKEEID 486



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 171 VVLGAIVE---EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V  G ++E   + R   + V + ++MV+ G+VP+      ++++L E   +E A + +R 
Sbjct: 292 VTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRG 351

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + +KG          ++  L    +V ++  +L E+ + G    L  Y  +I  +C   +
Sbjct: 352 VVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDEL-EKGEVASLMTYNTLIAGMCERGQ 410

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L EA RL+  M     +P+  TY  L+   C+   + +A  +LE+M+  G  P    F  
Sbjct: 411 LCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSI 470

Query: 348 IVRGLCEVGKFDESVN 363
           +V G+   G   E ++
Sbjct: 471 LVDGISLSGGKKEEID 486


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 241/539 (44%), Gaps = 41/539 (7%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K S+ VF++++   +E    F D ++V +EM  +   P+      +L  L    R +S  
Sbjct: 163 KFSIGVFSLLIMEFLEMGL-FEDALWVSREMRCS---PDSKACLAILNGLVRRRRFDSVW 218

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             ++ M  +G  P+   + ++ +             +L EM  LG++  +  YT  I  L
Sbjct: 219 VDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDL 278

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           CRENK+EEA ++F++M+   ++P+  TY  +I+  C+   L  A  + ++++V  L P  
Sbjct: 279 CRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNV 338

Query: 343 DVFVDIVRGLCEVGK-------FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            VF  +V G C+  +       F   V F  D   YV   +N L+   C +G    A  +
Sbjct: 339 VVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYV---YNCLIHGQCKSGNMLEAMGL 395

Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L +M    ++ D  ++ I I  LC  E + +A  L  RM    + P   TY++ + G CK
Sbjct: 396 LSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCK 455

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             N E AL +  ++++  +  + I++S L++G C+V  I  A+ ++  M+  G      +
Sbjct: 456 EYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVT 515

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL------- 567
           +  LI        + +A+RL S    +G      T+  ++ G  K  R  D +       
Sbjct: 516 YTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENN 575

Query: 568 -VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                + +V+        +  LI+ + +   +   + FF+ M   G+ PD  + +S+L  
Sbjct: 576 QAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKA 635

Query: 627 ------LADGSQLH--LVSSGINKLVSDSEVLDSSMYNILINGLWKE-GLTSQASYLLD 676
                 + D   LH  ++ +GI         L + M N L+   ++E G    A +L +
Sbjct: 636 HLREKRITDTMMLHCDMIKTGI---------LPNLMVNQLLAMFYQENGYLRSACFLTN 685



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/512 (21%), Positives = 215/512 (41%), Gaps = 47/512 (9%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           ++   + L+    E    E AL   R M    C P+S+    ++ GL+   R D      
Sbjct: 165 SIGVFSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNGLVRRRRFDSVWVDY 221

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
             M   G+  ++  Y+ +     ++    +  +L   M +L + P+   Y   I  LC  
Sbjct: 222 QLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRE 281

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
            ++++A  + E M + G+ P    +  ++ G C+ G   ++    +              
Sbjct: 282 NKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYK-------------- 327

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                           E +    + +   +   +   C+  E+  A  L   MV   V P
Sbjct: 328 ----------------EILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDP 371

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +   Y+  + G+CK  N  +A+ +  ++ + +L  D  +Y+ L+ GLC  E++ EA  +F
Sbjct: 372 NLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLF 431

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M       SS ++N LI+G C    ++KA+ L S   SSG      T++ ++ G  K+
Sbjct: 432 QRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKV 491

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           +  K  + +  +M ++G   DV  Y  LI +  ++  +K+    ++ M++AG+ P+  T 
Sbjct: 492 RNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 551

Query: 621 LSLLHG------LADGSQLHLVSSGINKLVSDSEVLDSSMYNI-----LINGLWKEGLTS 669
             L+ G      L+D    +L +   N+  +   ++  S +       LI GL + G   
Sbjct: 552 ACLVDGFWKEGRLSDAIDFYLEN---NQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYIL 608

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           +AS     M   G  PD  ++  ++ + + E+
Sbjct: 609 RASRFFSDMKSGGVTPDIWSYVSMLKAHLREK 640



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 167/387 (43%), Gaps = 40/387 (10%)

Query: 67  IRVLDNTNDLSSALKIFKWVSIQ----KRFQHTA--DTYCKMILKLGLAGNVEEMEGLCQ 120
           IR L   N +  A K+F+ + I       + ++A  D YCK        GN+ +  GL +
Sbjct: 275 IRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCK-------TGNLRQAYGLYK 327

Query: 121 N-MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
             +V E  PNV     +LV  F     +  A  + V+M   G   ++ V+N ++    + 
Sbjct: 328 EILVAELLPNV-VVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHG--QC 384

Query: 180 KRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G   + + +  EM    + P+V T   L+  L    R+  A   F+RM  +   P+S 
Sbjct: 385 KSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSV 444

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +I G      ++ ++ +  EM   G++  +  ++ +I   C+   ++ A+ L+  M
Sbjct: 445 TYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEM 504

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
               ++PD +TY  LI+   +   + +A  +  DM+  G+ P D  F  +V G  + G+ 
Sbjct: 505 TIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 564

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
            ++++F  +     T    ++++  C   K+    C++E                   LC
Sbjct: 565 SDAIDFYLENNQAATG--KSIVQRSC--WKYVGFTCLIEG------------------LC 602

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATY 445
           +N  I +A      M    V PD  +Y
Sbjct: 603 QNGYILRASRFFSDMKSGGVTPDIWSY 629



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 9/251 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L     + E   L Q M  ER         SL+  F   Y +  A+ +   M
Sbjct: 410 TYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEM 469

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            S G + ++  F+ ++    +  R     + +Y EM   GIVP+V T   L++  F+   
Sbjct: 470 TSSGVEPNIITFSTLIDGYCK-VRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEAN 528

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ-------- 269
           ++ AL  +  M + G  PN  TF  ++ G     R+ D++    E               
Sbjct: 529 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSC 588

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            +   +TC+I  LC+   +  A R F  M++  + PD  +Y  ++       R+ D   +
Sbjct: 589 WKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMML 648

Query: 330 LEDMIVIGLTP 340
             DMI  G+ P
Sbjct: 649 HCDMIKTGILP 659



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/344 (21%), Positives = 140/344 (40%), Gaps = 32/344 (9%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           +A++     A K+ LA+C+++ + +R     +  NI  R     E+I+     +G  V S
Sbjct: 113 SAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNISHRLFNALEDIQSPKFSIG--VFS 170

Query: 437 SVV----------------------PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            ++                      PD     A + G  +   ++     ++ + ++ LV
Sbjct: 171 LLIMEFLEMGLFEDALWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLV 230

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            D   YS L +   +    ++  ++   M+  G   +   + I I  LC   K+++A ++
Sbjct: 231 PDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKM 290

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             L    G      TY+ ++ G  K    +    +  ++LV     +V  +  L+    +
Sbjct: 291 FELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 350

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS- 653
             +L      F  MVK G+ P+      L+HG      + L + G   L+S+ E L+ S 
Sbjct: 351 ARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNM-LEAMG---LLSEMESLNLSP 406

Query: 654 ---MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               Y ILINGL  E   ++A+ L   M  +   P + T+  L+
Sbjct: 407 DVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLI 450


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 156/699 (22%), Positives = 289/699 (41%), Gaps = 105/699 (15%)

Query: 78  SALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL 137
           ++L  FK  S Q  F+   +++CK++  L  A                 Y   R  L  L
Sbjct: 76  ASLHFFKLASKQSNFRPNVNSHCKLVHILSRA---------------RMYDETRSYLNEL 120

Query: 138 VFSFVNHYRV----NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
           V    N+Y      N  +RV  +     FK S  VF+++L  I  EK    + + V+  M
Sbjct: 121 VTPSKNNYSSLVVWNELVRVFED-----FKFSPTVFDMIL-KIYCEKGMIKNALHVFDNM 174

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            K G VP++ + N LL  L       +A+  +  +++ G  P+  T  I++     +  V
Sbjct: 175 GKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWV 234

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           + +V  + EM  LG +L +  Y  +I        +E A  + K+M    ++ +++T   L
Sbjct: 235 NVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLL 294

Query: 314 INCLCENLRLDDANDILEDM-IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           I   C   +L++A  +L +M    G+   +  +  ++ G C V K D++V   ++     
Sbjct: 295 IKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVG 354

Query: 373 TSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
              +    NAL+   C  G+   A+ +L +M D  +  +  S++  +   C    + KA 
Sbjct: 355 LRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAI 414

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY------- 480
            +   M+   +  +  T+++ + G C++  +EDAL V+  +  + +  D +SY       
Sbjct: 415 SVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474

Query: 481 ----------------------------SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                                       + ++ G C++EK+ EA E F  M + G     
Sbjct: 475 FKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDG 534

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++  LI G C +  V++A +++          +   Y  ++ GL K ++ ++++ +L++
Sbjct: 535 VTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSE 594

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP----------------- 615
           M ++G + +V  Y  LI    ++ +L      +  M++ G  P                 
Sbjct: 595 MCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGR 654

Query: 616 -DRETML---------SLLHGLADGSQLHLVSSGINKLVSDSEVLDSS----------MY 655
            D   ML          L HG  D  +LH    G       ++ LD S          +Y
Sbjct: 655 IDEANMLLQKMVNLDVFLDHGYFD--RLHKADDGNLDSQKIADTLDESSKSFSLPNSVVY 712

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           NI I GL K G    A  +   +L +G+ PD  T+  L+
Sbjct: 713 NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLI 751



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 153/650 (23%), Positives = 270/650 (41%), Gaps = 90/650 (13%)

Query: 131 REALISLVFS---FVNHYRVNGAMRVLVN----MNSGGFKLSVDVFNVVLGAIV---EEK 180
           R  ++  VF+    VN Y  +G + V V+    M+  GF+L+V  +N ++   V   + +
Sbjct: 211 RLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDME 270

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRT 239
           R       V K M + GI+ N  TL  L++      ++E A    R M + +G   +   
Sbjct: 271 RA----EMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYA 326

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           + ++I G     ++DD+V +  EM ++G+++ L     +I   C+  ++ EA RL   M 
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
             DL P+  +Y  L++  C    +  A  +  +M+ +G+         +++GLC VG F+
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPI 414
           ++++          +P    +  LL+     G+FF A  +   +  R       ++N  I
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL- 473
              C+ E++ +A E   RM      PD  TY   + G CKL N E+A +V  ++  +++ 
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566

Query: 474 ---------------------VLDSIS-------------YSKLVEGLCQVEKITEAVEV 499
                                V+D +S             Y  L+ G C   ++ +A   
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTA 626

Query: 500 FCCMSKNG-------CSLSSSSF---------NILIYGLC------------VMRKVDK- 530
           +  M + G       CS   SS          N+L+  +              + K D  
Sbjct: 627 YFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDG 686

Query: 531 ---AIRLRSLAYSSGTSYT---TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              + ++      S  S++   +  Y   + GL K  +  D   + + +L+ G + D   
Sbjct: 687 NLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           YC LI   S    + D     + M+K GL P+  T  +L++GL     L       +KL 
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 +   YNILI+G  K G T +A  L + ML +G  P   T+  L+
Sbjct: 807 LKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALI 856



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/555 (21%), Positives = 235/555 (42%), Gaps = 54/555 (9%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           + YCK        G V E E L   MV         +  +L+  F     V  A+ V   
Sbjct: 367 NGYCK-------NGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNE 419

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G + +V   N +L  +      F D + V+  M+K G+ P+  +   LL++LF+  
Sbjct: 420 MLRVGIQSNVVTHNSLLKGLCRVG-AFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMG 478

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               AL  +  +  +G   ++  F  +I G     ++ ++      M +LG + +   Y 
Sbjct: 479 EFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYR 538

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C+   +EEA ++ + M    ++P    Y  LI  L ++ +  +  D+L +M + 
Sbjct: 539 TLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLK 598

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA 392
           GL+P    +  ++ G C+ G+ D++     D      +P+    + ++      G+   A
Sbjct: 599 GLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEA 658

Query: 393 KCILEKMAD-----------------------RKIADCDS-------------WNIPIRW 416
             +L+KM +                       +KIAD                +NI I  
Sbjct: 659 NMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAG 718

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC++ ++  A ++   +++    PD  TY   + G     N  DA  +  ++  + L  +
Sbjct: 719 LCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPN 778

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            I+Y+ L+ GLC+   +  A ++F  +   G + +  S+NILI G C      +A+ LR+
Sbjct: 779 IITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRN 838

Query: 537 LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                G S +  TY+ ++ G  K   + +A +LL  + ++  +    ++  +  L++   
Sbjct: 839 KMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQ---NIAKFVKLVEGHV 895

Query: 594 EQNKLKDCALFFNVM 608
           +  ++K  A   N+M
Sbjct: 896 KCGEVKKIAKLHNMM 910



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 194/454 (42%), Gaps = 25/454 (5%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           VY EM++ GI  NV T N LL+ L      E AL  +  M K+G  P+  ++  ++  L 
Sbjct: 416 VYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLF 475

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                  ++++  ++   G       +  +I   C+  K+ EA   F  M+ L   PD +
Sbjct: 476 KMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGV 535

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI+  C+   +++A  + E M    + P+ +++  ++ GL +  K  E ++ L + 
Sbjct: 536 TYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM 595

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN---- 420
           C    SP    +  L+   C+ G+   A      M ++  A       P   +C      
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFA-------PNVIICSKIVSS 648

Query: 421 ----EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
                 I +A  LL +MV   V  D   +           + +       + S    + +
Sbjct: 649 LYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPN 708

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           S+ Y+  + GLC+  K+ +A ++F  +   G S  + ++  LI+G      V+ A  LR 
Sbjct: 709 SVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRD 768

Query: 537 LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                G +    TY  ++ GL K   L RA+ L     ++ ++G A +V +Y ILI    
Sbjct: 769 EMLKRGLAPNIITYNALINGLCKSGNLDRAQKL---FDKLHLKGLAPNVISYNILIDGYC 825

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           +    ++     N M+K G+ P   T  +L++G 
Sbjct: 826 KNGNTREALDLRNKMLKEGISPSLITYSALIYGF 859



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 205/467 (43%), Gaps = 45/467 (9%)

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + +  I+ + C +  ++ A+ +F  M  L  +P   +   L++ L       +A  + + 
Sbjct: 149 TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDH 208

Query: 333 MIVIGLTPTDDVFV--DIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNA 386
           +  +G+ P  DVF    +V   C+ G  + +V+F++  D  G+  +   +N+L++ C + 
Sbjct: 209 INRLGIVP--DVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSI 266

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS-SVVPDCAT 444
           G    A+ +L+ M +R I  +  +  + I+  C   ++ +A ++L  M  S  +V D   
Sbjct: 267 GDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYA 326

Query: 445 YSAFVLGKCKLCNYEDALRVFR-------------------------QVS-AQSLVL--- 475
           Y   + G C++C  +DA+R+                           QVS A+ L++   
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386

Query: 476 ------DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 +S SYS L++G C+   +T+A+ V+  M + G   +  + N L+ GLC +   +
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A+ +  L    G +    +Y  ++  L K+      L +   +L  G      A+  +I
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
               +  K+ +    FN M + G  PD  T  +L+ G      +        K+  ++ +
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               +YN LI GL+K   T +   LL  M  KG  P+  T+G L+  
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAG 613



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 106/487 (21%), Positives = 208/487 (42%), Gaps = 14/487 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           +YC ++  L   G       L  +++   Y     A  +++  F    ++  A      M
Sbjct: 466 SYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRM 525

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETN 216
              GF+     +  ++      K G  +  F  KE M K  I+P+++  N L+  LF++ 
Sbjct: 526 KELGFEPDGVTYRTLIDGYC--KLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSK 583

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +    +D    M  KG  PN  T+  +I G     R+D + +   +M + G    +   +
Sbjct: 584 KTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICS 643

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            I+  L R  +++EA  L + M  LD+  D   ++ L      NL      D L++    
Sbjct: 644 KIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKS 703

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLA 392
              P   V+   + GLC+ GK D++            SP N     L+     AG    A
Sbjct: 704 FSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDA 763

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             + ++M  R +A +  ++N  I  LC++  + +A +L  ++ +  + P+  +Y+  + G
Sbjct: 764 FSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDG 823

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK  N  +AL +  ++  + +    I+YS L+ G C+   + +A  +   M +     +
Sbjct: 824 YCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQN 883

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            + F  L+ G     +V K  +L ++ + +       ++ ++ L +     AK++L    
Sbjct: 884 IAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQMELDV--FSNAKEML---- 937

Query: 572 QMLVEGC 578
           ++ V+GC
Sbjct: 938 KLCVDGC 944


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 200/440 (45%), Gaps = 6/440 (1%)

Query: 192  EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            +M   G+ P+  T+N +LE+  E   IE A + F  M  +G  P+S ++++++ G   + 
Sbjct: 773  DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 832

Query: 252  RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            ++ ++   L  M   G   + +  T I+  LC    +  AI  F+ M  L   P+ + + 
Sbjct: 833  KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 892

Query: 312  ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLE---- 366
             LI+ LC+   +  A ++LE+M+  G  P       ++ GLC+ G  +++   FL+    
Sbjct: 893  SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 952

Query: 367  DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            D        + +++   C   K   A+ +  +M ++ +  + +++   I   C+     +
Sbjct: 953  DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 1012

Query: 426  AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            AYEL+  M     +P+  TY+A +   CK     +A  +  +  +  L  D ++Y+ L++
Sbjct: 1013 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 1072

Query: 486  GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
              C+   I +A+  FC M+K G        NILI   C  +K+ ++ RL  L  S G   
Sbjct: 1073 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 1132

Query: 546  TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            T  TYT ++    K       L     M   GC  D   Y  LI  + +++ + +    +
Sbjct: 1133 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 1192

Query: 606  NVMVKAGLVPDRETMLSLLH 625
              M+  GL P   T ++L +
Sbjct: 1193 EAMIDRGLSPPEVTRVTLAY 1212



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 197/488 (40%), Gaps = 39/488 (7%)

Query: 208  LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
            +L    E  R+  A+     M  +G  P+S T   V++  +    ++ + ++  EM   G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 268  IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
            +  + S Y  ++    R+ K++EA R    M     +PD  T   ++  LCEN  ++ A 
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 328  DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECC 383
                 MI +G  P    F  ++ GLC+ G   ++   LE+       P    H AL++  
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 384  CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV-PDC 442
            C  G                            W        KA+ L  ++V S    P+ 
Sbjct: 934  CKRG----------------------------W------TEKAFRLFLKLVRSDTYKPNV 959

Query: 443  ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             TY++ + G CK      A  +F ++  Q L  +  +Y+ L+ G C+      A E+   
Sbjct: 960  HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL 1019

Query: 503  MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
            M   G   +  ++N  I  LC   +  +A  L + A+S G      TYT ++    K   
Sbjct: 1020 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 1079

Query: 563  AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
                L    +M   G   D+    ILI +   Q K+K+    F ++V  GL+P +ET  S
Sbjct: 1080 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 1139

Query: 623  LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
            ++        + L     + +     V DS  Y  LI+GL K+ +  +A  L + M+ +G
Sbjct: 1140 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 1199

Query: 683  WVPDATTH 690
              P   T 
Sbjct: 1200 LSPPEVTR 1207



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 207/461 (44%), Gaps = 19/461 (4%)

Query: 193  MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            M++ G +P+  T   +L  L E   +  A+  FR+M   G  PN   F  +I GL     
Sbjct: 844  MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 903

Query: 253  VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYE 311
            +  +  +L EM   G +  +  +T +I  LC+    E+A RLF K++R+    P+  TY 
Sbjct: 904  IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 963

Query: 312  ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD---ESVNFLEDK 368
             +I   C+  +L+ A  +   M   GL P  + +  ++ G C+ G F    E +N + D+
Sbjct: 964  SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 1023

Query: 369  CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
             G++ +   +NA ++  C   +   A  +L K     + AD  ++ I I+  C+  +I +
Sbjct: 1024 -GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 1082

Query: 426  AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            A     RM  +    D    +  +   C+    +++ R+F+ V +  L+    +Y+ ++ 
Sbjct: 1083 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 1142

Query: 486  GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
              C+   I  A++ F  M ++GC   S ++  LI GLC    VD+A +L       G S 
Sbjct: 1143 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 1202

Query: 546  TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               T   +     K   + + +++L  +      L +     L++ +  + K+   ALFF
Sbjct: 1203 PEVTRVTLAYEYCKRNDSANAMILLEPL---DKKLWIRTVRTLVRKLCSEKKVGVAALFF 1259

Query: 606  NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
              +++     DR T+ +     ++        SG N LV+D
Sbjct: 1260 QKLLEKDSSADRVTLAAFTTACSE--------SGKNNLVTD 1292



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 175/424 (41%), Gaps = 6/424 (1%)

Query: 277  CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            C++       +L EA+ +   M+   L P  +T   ++    E   ++ A ++ ++M V 
Sbjct: 753  CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 812

Query: 337  GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLA 392
            G+ P    +  +V G    GK  E+  +L         P NA    +L   C  G    A
Sbjct: 813  GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 872

Query: 393  KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                 KM D     +  ++   I  LC+   I++A+E+L  MV +   P+  T++A + G
Sbjct: 873  IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 932

Query: 452  KCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK    E A R+F + V + +   +  +Y+ ++ G C+ +K+  A  +F  M + G   
Sbjct: 933  LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 992

Query: 511  SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
            + +++  LI G C      +A  L +L    G      TY   +  L K  RA +   +L
Sbjct: 993  NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 1052

Query: 571  AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             +    G   D   Y ILIQ   +QN +     FF  M K G   D      L+      
Sbjct: 1053 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 1112

Query: 631  SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             ++         +VS   +     Y  +I+   KEG    A      M   G VPD+ T+
Sbjct: 1113 KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 1172

Query: 691  GLLV 694
            G L+
Sbjct: 1173 GSLI 1176



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 150/355 (42%), Gaps = 6/355 (1%)

Query: 348  IVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK 403
            ++R   E+G+ +E+V  + D      +P     N +LE     G    A+ + ++M+ R 
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 404  I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            +  D  S+ + +     + +I++A   L  M+    +PD AT +  +   C+      A+
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 463  RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
              FR++       + I+++ L++GLC+   I +A E+   M +NG   +  +   LI GL
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 523  CVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
            C     +KA RL   L  S        TYT ++ G  K  +     ++ ++M  +G   +
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 582  VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
            V  Y  LI    +           N+M   G +P+  T  + +  L   S+       +N
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 642  KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            K  S     D   Y ILI    K+   +QA      M   G+  D   + +L+ +
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 1108



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 2/239 (0%)

Query: 128  PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
            PNV     S++  +    ++N A  +   M   G   +V+ +  ++    +    F    
Sbjct: 957  PNV-HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG-SFGRAY 1014

Query: 188  FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
             +   M   G +PN+ T N  ++ L + +R   A +   +    G   +  T+ I+I+  
Sbjct: 1015 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 1074

Query: 248  IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               + ++ +++    M   G + ++     +I   CR+ K++E+ RLF+++ +L L+P +
Sbjct: 1075 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 1134

Query: 308  LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY  +I+C C+   +D A     +M   G  P    +  ++ GLC+    DE+    E
Sbjct: 1135 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 3/161 (1%)

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV--EAYCILIQSMS 593
           SLA  SG S     +    +G  K +    L +V A  L+    L    E    ++++ S
Sbjct: 701 SLASESG-SMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFS 759

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           E  +L +       M   GL P   TM  +L    +   +    +  +++     V DSS
Sbjct: 760 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSS 819

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            Y +++ G +++G   +A   L  M+ +G++PD  T  L++
Sbjct: 820 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL 860


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 218/515 (42%), Gaps = 35/515 (6%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           +N A+    +M +     S+  F  +  A+V  K  +   V + K+M  AGI  +V +L 
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKH-YKTVVSLSKQMEMAGISHDVLSLT 130

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+        ++       ++ K G  PN  TF  +I G     ++  ++ +   M   
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G +  +  Y+ II  LCR  K  E I+L + M+ +   PD + Y  +++ LC++  +++A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
             I   M   G+ PT   +  ++ GL  +G++ E+   L +  G    P           
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMP----------- 299

Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
                              D  ++++ I  +C+  E+ +A  +L  M    V PD ATY+
Sbjct: 300 -------------------DLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYN 340

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             + G C      +A +VF  + ++  + D  S+S LV G C+ ++I EA ++F  M+  
Sbjct: 341 TLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR 400

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G    + S+N LI GLC  R+  +A  L    +S+G      TY+ ++  L K       
Sbjct: 401 GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQA 460

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           + +   M   G   D+  Y I+I  M +  K KD    F  +   GL P+       + G
Sbjct: 461 MGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDG 520

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           +  G  L        ++  D    D S     ING
Sbjct: 521 VCKGGLLDEAHKAFRQMEKD----DCSPAQGCING 551



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/499 (23%), Positives = 196/499 (39%), Gaps = 45/499 (9%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I  AL  F  M      P+   F  +   L+        VS+  +M   GI  ++   T 
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   CR   ++    +   +  L L P+ +T+  LIN  C   ++  A ++ + M+  G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             P    +  I++GLC VGK  E +  LE        P    +N +++  C       A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I  KM    I     ++   I  L      ++A+ LL  M   +++PD   +S  +   
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK     +A  + + ++   +  D  +Y+ L+ G C   ++ EA +VF  M   G     
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            SF+IL+ G C  +++D+A +L       G    T +Y  ++ GL + +R  +   +   
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   ++  Y IL+  +S+Q  L      F  M  +GL PD  T             
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVT------------- 478

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG-----WVPDA 687
                                 YNI+I+G+ K G    A  L   +  KG     WV   
Sbjct: 479 ----------------------YNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTP 516

Query: 688 TTHGLLVGSSVGEEIDSRR 706
           T  G+  G  + E   + R
Sbjct: 517 TIDGVCKGGLLDEAHKAFR 535



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 138/309 (44%), Gaps = 6/309 (1%)

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I  A      MV ++ +P    +        ++ +Y+  + + +Q+    +  D +S + 
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+   C++  +     V   + K G   +  +F+ LI G C+  K+ +AI L  +  + G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 +Y+ I+ GL ++ +  +++ +L  M V GC  DV  Y  ++  + +   + +  
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  M   G++P   T  SL+HGL +  +       +N++   + + D   +++LI+ +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFD----SSSFPDS 717
            KEG  S+A  +L  M   G  PD  T+  L+ G  +  E+   R  F+        PD 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 718 VS-DILAEG 725
            S  IL  G
Sbjct: 372 FSFSILVNG 380


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 222/499 (44%), Gaps = 47/499 (9%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREA 133
           +L  ALK+F  +S +      + +Y  +I  L   G +EE  GL   M ++   P+ R  
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVF 188
            + L+ +  +   ++ A  +   M   G K +V  + V++  +     +EE  G      
Sbjct: 305 TV-LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG------ 357

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V ++MVK  I P+V T N L+    +  R+  A +    M K+ C PN RTF  +++GL 
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +   +V +L  M D G+  ++  Y  +I  LCRE  +  A +L   M   D+ PD L
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
           T+  +IN  C+  + D A+  L  M+  G++  +     ++ G+C+VGK  +++  LE  
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537

Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
            K   +T+PH                                S N+ +  L +  ++++ 
Sbjct: 538 VKMRILTTPH--------------------------------SLNVILDMLSKGCKVKEE 565

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +LG++    +VP   TY+  V G  +  +   + R+   +     + +   Y+ ++ G
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LCQ  ++ EA ++   M  +G S +  ++ +++ G     K+D+A+         G    
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685

Query: 547 TSTYTKIMLGLVKLQRAKD 565
              Y+ ++ G V  Q+  D
Sbjct: 686 DRIYSSLLQGFVLSQKGID 704



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 217/481 (45%), Gaps = 8/481 (1%)

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           +RRM   G       +  ++  L  N   + +   + ++  +G  L+    T ++   CR
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242

Query: 285 ENKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
              L +A+++F +M + +   P+ ++Y  LI+ LCE  RL++A  + + M   G  P+  
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 344 VFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
            +  +++ LC+ G  D++ N  ++     C      +  L++  C  GK   A  +  KM
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 400 A-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             DR      ++N  I   C++  +  A+ELL  M   +  P+  T++  + G C++   
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
             A+ + +++    L  D +SY+ L++GLC+   +  A ++   M+         +F  +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I   C   K D A     L    G S    T T ++ G+ K+ + +D L +L  ++    
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
                +  +++  +S+  K+K+       + K GLVP   T  +L+ GL     +   S 
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI-TGSF 601

Query: 639 GINKLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
            I +L+  S  L +   Y I+INGL + G   +A  LL  M   G  P+  T+ ++V   
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 698 V 698
           V
Sbjct: 662 V 662



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 112/504 (22%), Positives = 207/504 (41%), Gaps = 47/504 (9%)

Query: 238 RTFEIVIKGLIAN-SRVDDSVSILGEMFD-----LGIQLELSFYTCIIPMLCRENKLEEA 291
           R    VI  LI   SR +  +  L   FD      G +L    Y+ ++  L + +    A
Sbjct: 120 RVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL------------- 338
              ++ M A   +   + Y  ++N LC+N   + A   +  ++ IG              
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239

Query: 339 -----------------------TPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGY 371
                                   P    +  ++ GLCEVG+ +E+        E  C  
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
            T  +  L++  C+ G    A  + ++M  R    +  ++ + I  LC + +I +A  + 
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +MV   + P   TY+A + G CK      A  +   +  ++   +  ++++L+EGLC+V
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K  +AV +   M  NG S    S+N+LI GLC    ++ A +L S            T+
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           T I+    K  +A      L  ML +G +LD      LI  + +  K +D       +VK
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
             ++    ++  +L  L+ G ++    + + K+     V     Y  L++GL + G  + 
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           +  +L+LM   G +P+   + +++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIII 623



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 2/309 (0%)

Query: 390 FLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           FLA     +M AD  +     +   +  LC+N     A   + +++    V D    ++ 
Sbjct: 177 FLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSL 236

Query: 449 VLGKCKLCNYEDALRVFRQVSAQ-SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
           +LG C+  N  DAL+VF  +S + +   +S+SYS L+ GLC+V ++ EA  +   M + G
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  S+ ++ +LI  LC    +DKA  L       G      TYT ++ GL +  + ++  
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            V  +M+ +     V  Y  LI    +  ++        VM K    P+  T   L+ GL
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               + +     + +++ +    D   YN+LI+GL +EG  + A  LL  M      PD 
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476

Query: 688 TTHGLLVGS 696
            T   ++ +
Sbjct: 477 LTFTAIINA 485



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/337 (20%), Positives = 149/337 (44%), Gaps = 22/337 (6%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D +F+ + +VK  I+    +LN +L++L +  +++  L    +++K G  P+  T+  ++
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            GLI +  +  S  IL  M   G    +  YT II  LC+  ++EEA +L   M+   + 
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK------- 357
           P+ +TY  ++     N +LD A + +  M+  G    D ++  +++G     K       
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708

Query: 358 ---------------FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
                           +E ++ +E   G ++     L+   C  G+   +  +++ + +R
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            +    + +I +   C  ++  K  EL+  ++ S  VP   ++   + G  K  + E A 
Sbjct: 769 GVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAR 828

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            +  ++   + V++       VE L + ++  +  EV
Sbjct: 829 ELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEV 865


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/511 (22%), Positives = 225/511 (44%), Gaps = 10/511 (1%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRI--ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           +  + P++   N +L  L  +     +++LD FR +      PN  TF +++    +   
Sbjct: 166 RGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGT 225

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           + D++S L  M   G+  ++  Y  ++   CR+  L EA  L   M+   + P   TY  
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY- 371
           L++       +  A +++E M   G  P    +  +  GLC+ GK DE+   L+D+  + 
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFK-LKDEMEHL 344

Query: 372 -VTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            + SP    +N L++ C    +   A  +LE+M D+ + +   + NI ++ LC   ++ +
Sbjct: 345 SIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEE 404

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A   L  M    + PD  TY+  +   CK  N   A  +  ++    L +D+ + + L+ 
Sbjct: 405 ALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLY 464

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC+ ++  EA E+     + G      S+  ++       K + A+ L         + 
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           +  TY  ++ GL  + +  + +  L +++ +G   D   Y I+I +  ++  L+    F 
Sbjct: 525 SIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFH 584

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           N M++    PD  T  +L++GL    +L              + +D   YN LI  L K+
Sbjct: 585 NKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKD 644

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           G    A +    M  +G  PDA T+ +++ +
Sbjct: 645 GDVDTALHFFADMEARGLQPDAFTYNVVLSA 675



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 151/629 (24%), Positives = 261/629 (41%), Gaps = 68/629 (10%)

Query: 126 RYPNVREALISLVFSFVNHYR-----VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE- 179
           R P++   L+   F    H R      N  +  L    S   + S+DVF  ++   +   
Sbjct: 151 RLPHLAAQLLH-SFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPN 209

Query: 180 -------------KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
                        K   AD +     M   G+ P+V T N LL+       +  A     
Sbjct: 210 HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLA 269

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           RM K+G  P   T+  ++        +  + +++  M   G + +L  Y  +   LC+  
Sbjct: 270 RMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAG 329

Query: 287 KLEEAIRLFKMMRALDLM-PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
           K++EA +L   M  L ++ PD +TY  L++   +  R  DA ++LE+M   G+  +    
Sbjct: 330 KVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTH 389

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMAD 401
             +V+GLC  G+ +E++  L+       +P    +N L++  C A     A  ++++M  
Sbjct: 390 NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +  D  + N  +  LC+ +   +A ELL        VPD  +Y   +    K    E 
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL ++ ++S + L     +Y+ L++GLC + K+TEA++    + K G     +++NI+I+
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIH 569

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEG 577
             C    ++KA +  +    +       T   +M GL    KL++A  L    A+   +G
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE---KG 626

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD----------------RETML 621
             +DV  Y  LIQ++ +   +     FF  M   GL PD                 E   
Sbjct: 627 KKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQ 686

Query: 622 SLLHGLADGSQLH------LVSSGIN--KLVSDSEVL------------DSSMYNILING 661
           ++LH L +  +L       L+ S     K   D EV             D   YN  +  
Sbjct: 687 NMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKE 746

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           L   G   +A  +LD M+ KG   D++T+
Sbjct: 747 LCVGGQLKEAKAVLDEMMQKGMSVDSSTY 775



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/529 (23%), Positives = 239/529 (45%), Gaps = 22/529 (4%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYL 208
           A  +L  M   G   +   +N ++ A    + G+      V + M   G  P++ T N L
Sbjct: 264 ARTLLARMKKEGIAPTRATYNTLVSAYA--RLGWIKQATNVVEAMTAFGFEPDLWTYNVL 321

Query: 209 LEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
              L +  +++ A      M H     P+  T+  ++       R  D++++L EM D G
Sbjct: 322 AAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKG 381

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           ++  L  +  ++  LCRE +LEEA+   KMM    L PD +TY  LI+  C+   +  A 
Sbjct: 382 VKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAF 441

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECC 383
            ++++M+  GL         ++  LC+  +++E+   L    + G+V     +  ++   
Sbjct: 442 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAY 501

Query: 384 CNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
               K   A  + ++M+ RK+     ++N  I+ LC   ++ +A + L  ++   +VPD 
Sbjct: 502 FKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+  +   CK  + E A +   ++       D ++ + L+ GLC   K+ +A+++F  
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
            ++ G  +   ++N LI  LC    VD A+   +   + G      TY  ++  L +  R
Sbjct: 622 WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL-------KDCALFFNVMVKAGLVP 615
           +++   +L ++   G   +  +Y  LI+S +E+ K         DC    N   K G   
Sbjct: 682 SEEAQNMLHKLDESGKLSERFSYP-LIKSSAEEVKTGKDPEVKSDCESGGN--AKGG--- 735

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           D+E+    +  L  G QL    + +++++     +DSS Y  L+ GL K
Sbjct: 736 DQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 234/569 (41%), Gaps = 31/569 (5%)

Query: 19  NLTSCISSLSCANTIPLSSE----TDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTN 74
            L   +S+LS      LS +      ++K+H       + ++L   +  + +       N
Sbjct: 225 TLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYN 284

Query: 75  DLSSALKIFKW-------VSIQKRFQHTADTYCKMILKLGL--AGNVEEMEGLCQNMVKE 125
            L SA     W       V     F    D +   +L  GL  AG V+E   L   M  E
Sbjct: 285 TLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM--E 342

Query: 126 RYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
               V   +++   LV +   + R + A+ +L  M   G K S+   N+V+  +  E + 
Sbjct: 343 HLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQ- 401

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
             + +   K M + G+ P+V T N L++   +   +  A      M + G   ++ T   
Sbjct: 402 LEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNT 461

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++  L    R +++  +L      G   +   Y  ++    +ENK E A+ L+  M    
Sbjct: 462 LLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRK 521

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L P   TY  LI  LC   +L +A D L +++  GL P D  +  I+   C+ G  +++ 
Sbjct: 522 LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAF 581

Query: 363 NF----LED--KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIR 415
            F    LE+  K   VT   N L+   C  GK   A  + E  A++ K  D  ++N  I+
Sbjct: 582 QFHNKMLENYFKPDVVTC--NTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQ 639

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC++ ++  A      M    + PD  TY+  +    +    E+A  +  ++     + 
Sbjct: 640 ALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLS 699

Query: 476 DSISYSKLVEGLCQVEKITEAVEVF--CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           +  SY  L++   +  K  +  EV   C    N       S+N  +  LCV  ++ +A  
Sbjct: 700 ERFSYP-LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKA 758

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           +       G S  +STY  +M GL+K Q+
Sbjct: 759 VLDEMMQKGMSVDSSTYITLMEGLIKRQK 787



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 203/516 (39%), Gaps = 80/516 (15%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD--LGIQLELSFYT--C 277
           L  FRR  +    P+ +    V+  L  +       S+  ++F   + ++L  + YT   
Sbjct: 160 LHSFRR--RGHVRPSLQAANAVLSALARSPSTSPQASL--DVFRSLIALRLHPNHYTFNL 215

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++   C +  L +A+     M+   L PD +TY  L+   C    L +A  +L  M   G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           + PT   +  +V     +G   ++ N +E    +   P                      
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEP---------------------- 313

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV-PDCATYSAFVLGKCKLC 456
                   D  ++N+    LC+  ++ +A++L   M   S+V PD  TY+  V    K  
Sbjct: 314 --------DLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQ 365

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              DAL +  ++  + +    ++++ +V+GLC+  ++ EA+     M++ G +    ++N
Sbjct: 366 RSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYN 425

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI   C  R V KA  L      SG    T T   ++  L K +R ++   +L      
Sbjct: 426 TLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQR 485

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   D  +Y  ++ +  ++NK +     ++ M K  L P   T                 
Sbjct: 486 GFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT----------------- 528

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                             YN LI GL   G  ++A   L+ ++ KG VPD TT+ +++ +
Sbjct: 529 ------------------YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHA 570

Query: 697 SVGEEIDSRRFAFDSSSF-----PDSVS-DILAEGL 726
              E    + F F +        PD V+ + L  GL
Sbjct: 571 YCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGL 606


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/552 (22%), Positives = 250/552 (45%), Gaps = 45/552 (8%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D +++Y EM    +VP+V T   ++  L ++ ++E A   FR M + G  PN  ++  +I
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLI 164

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
             L     V ++  + G M   GI  ++  YT ++  L +      A  +F+++    L+
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  LI+  C+   ++    +L++M    + P   V+  IV G  + G  +E+++ 
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIAD----CDSWNIPIRW 416
           +         P    +  L++    A +  +A  + ++M  R + +     DS+   +  
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF---VNN 341

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           L  +  + +A EL   M+   ++PD   Y++ + G  K     DA  + ++++ +S   D
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 477 SISYSKLVEGL----------------------------------CQVEKITEAVEVFCC 502
            ++Y+ L+ GL                                  C+   +  A+++   
Sbjct: 402 VVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   G   +S + NIL+  LC   +++K + L +     G   T +T+  ++    K +R
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
           A  +L +  Q++  G  LD+  Y  LI +      ++   L F  M+  G++ D  T  +
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+HG    S L    +  ++++++    +   YNIL+ GL    L  +A+ L++ M  +G
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 683 WVPDATTHGLLV 694
            VP+ATT+ +LV
Sbjct: 642 LVPNATTYDILV 653



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 221/511 (43%), Gaps = 16/511 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM +  I PNV   + +++   +   +  A+D  R+M ++   PN   +  +I G    
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +   ++ +  EM   G++         +  L R  ++EEA  LFK M +  L+PD + Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD-ESVNFLEDKC 369
             +++   +  +  DA +I ++M           +  ++ GL ++GK++ ES +    + 
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 370 GYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           G    ++  N ++   C  G    A  +L +M    +  +  + NI ++ LC   EI K 
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +LL  M+V    P   T+ A +    K    +  L +  Q+    + LD  +Y+ L+  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++  I  A  VF  M   G      ++N LI+G C+   + KA  + S   + G S  
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ GL   +  K+   ++ QM   G   +   Y IL+    +   +K+C   + 
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW--- 663
            M+  G VP   T   L+   A G ++      + ++       +SS Y+ILI G +   
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 664 ---------KEGLTSQASYLLDLMLGKGWVP 685
                    K    ++A  L + M  KG++P
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/502 (21%), Positives = 226/502 (45%), Gaps = 6/502 (1%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +V+  N L++       I  A++    M  +G  P+  T+  ++ G      +  +  ++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
           GE+  + ++  +  YT +I   C+   LE+A+ ++  M    L+PD +TY  ++N LC++
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSPH 376
            ++++A  +  +M  +G+ P    +  ++  L + G   E+       +    G+    +
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 377 NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
            AL++    AG    A+ + + + +   + +C +++  I   C+  ++ K   LL  M  
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P+   YS+ V G  K     +A+ V R++  ++++ +   Y  L++G  + ++   
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+++F  M   G   ++   +  +  L    ++++A  L     S G       YT +M 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K  +  D   +  +M  +    DV AY +LI  + +  K +  + F   M + GL P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES-FHTGMRQLGLAP 434

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  ++++       L      +N++ S     +S   NIL+  L   G   +   LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 676 DLMLGKGWVPDATTHGLLVGSS 697
           + ML  G+ P  TTH  ++ +S
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDAS 516



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 121/526 (23%), Positives = 230/526 (43%), Gaps = 17/526 (3%)

Query: 180 KRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G     FV +  MV  GI  +V     L++ LF+     +A D F+ + ++   PN  
Sbjct: 169 KEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCV 228

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +I G      V+    +L EM +  I   +  Y+ I+    ++  L EA+ + + M
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
              +++P+   Y  LI+   +  +   A D+ ++M   GL   + V    V  L   G+ 
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRM 348

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           +E+    +D       P    + ++++    AGK   A  I ++M ++    D  ++N+ 
Sbjct: 349 EEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVL 408

Query: 414 IRWL-----CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           I  L      E+E        LG      + PD AT++  +   CK  N  +AL++  ++
Sbjct: 409 INGLFKLGKYESESFHTGMRQLG------LAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            +  L  +SI+ + LV+ LC   +I + +++   M   G   + ++   ++      R+ 
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D  + +       G     STY  ++    +L   +   +V   M+ +G   D+  Y  L
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I      + LK      + M+  G+ P+ ET   LL GL+    +   +  +N++     
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           V +++ Y+IL++G  K G   +   L   M+ KG+VP   T+ +L+
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 171/392 (43%), Gaps = 42/392 (10%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L++  C  G+   A  +LE M     A D  ++N  +   C+  ++  A +L+G + +
Sbjct: 21  NVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISL 80

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            ++ P+  TY+  +   CK    EDAL ++ +++ +SLV D ++Y+ ++ GLC+  K+ E
Sbjct: 81  VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEE 140

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  VF  M + G   +  S+  LI  L     V +A  L+      G  +    YT +M 
Sbjct: 141 AKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200

Query: 556 GLVK---LQRAKDLL-VVLAQMLVEGCAL------------DVEAYCILIQSMSEQNKLK 599
           GL K      A+D+  V+L + LV  C              DV    +L+Q M E++   
Sbjct: 201 GLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFP 260

Query: 600 DCALFFNV-------------------MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +  ++ ++                   MV+  ++P+     +L+ G     Q  +     
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
            ++ S     ++ + +  +N L + G   +A  L   M+ +G +PD   +  ++      
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 699 GEEIDSRRFAFD----SSSFPDSVSDILAEGL 726
           G+E D+   A +    SS F     ++L  GL
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 87/174 (50%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             V+K+M+  GI+ ++ T N L+     ++ ++ A     +M  +G  PN  T+ I++ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L A   + ++  ++ +M + G+    + Y  ++    +   ++E ++L+  M     +P 
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             TY  LI+C  +  ++  A +++++M V G+ P    +  ++ G  ++ K  E
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE 734


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/552 (22%), Positives = 250/552 (45%), Gaps = 45/552 (8%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D +++Y EM    +VP+V T   ++  L ++ ++E A   FR M + G  PN  ++  +I
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLI 164

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
             L     V ++  + G M   GI  ++  YT ++  L +      A  +F+++    L+
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  LI+  C+   ++    +L++M    + P   V+  IV G  + G  +E+++ 
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIAD----CDSWNIPIRW 416
           +         P    +  L++    A +  +A  + ++M  R + +     DS+   +  
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF---VNN 341

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           L  +  + +A EL   M+   ++PD   Y++ + G  K     DA  + ++++ +S   D
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 477 SISYSKLVEGL----------------------------------CQVEKITEAVEVFCC 502
            ++Y+ L+ GL                                  C+   +  A+++   
Sbjct: 402 VVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   G   +S + NIL+  LC   +++K + L +     G   T +T+  ++    K +R
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
           A  +L +  Q++  G  LD+  Y  LI +      ++   L F  M+  G++ D  T  +
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+HG    S L    +  ++++++    +   YNIL+ GL    L  +A+ L++ M  +G
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 683 WVPDATTHGLLV 694
            VP+ATT+ +LV
Sbjct: 642 LVPNATTYDILV 653



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 221/511 (43%), Gaps = 16/511 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM +  I PNV   + +++   +   +  A+D  R+M ++   PN   +  +I G    
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +   ++ +  EM   G++         +  L R  ++EEA  LFK M +  L+PD + Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD-ESVNFLEDKC 369
             +++   +  +  DA +I ++M           +  ++ GL ++GK++ ES +    + 
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 370 GYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           G    ++  N ++   C  G    A  +L +M    +  +  + NI ++ LC   EI K 
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +LL  M+V    P   T+ A +    K    +  L +  Q+    + LD  +Y+ L+  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++  I  A  VF  M   G      ++N LI+G C+   + KA  + S   + G S  
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ GL   +  K+   ++ QM   G   +   Y IL+    +   +K+C   + 
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW--- 663
            M+  G VP   T   L+   A G ++      + ++       +SS Y+ILI G +   
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 664 ---------KEGLTSQASYLLDLMLGKGWVP 685
                    K    ++A  L + M  KG++P
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/502 (21%), Positives = 226/502 (45%), Gaps = 6/502 (1%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +V+  N L++       I  A++    M  +G  P+  T+  ++ G      +  +  ++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
           GE+  + ++  +  YT +I   C+   LE+A+ ++  M    L+PD +TY  ++N LC++
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSPH 376
            ++++A  +  +M  +G+ P    +  ++  L + G   E+       +    G+    +
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 377 NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
            AL++    AG    A+ + + + +   + +C +++  I   C+  ++ K   LL  M  
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P+   YS+ V G  K     +A+ V R++  ++++ +   Y  L++G  + ++   
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+++F  M   G   ++   +  +  L    ++++A  L     S G       YT +M 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K  +  D   +  +M  +    DV AY +LI  + +  K +  + F   M + GL P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES-FHTGMRQLGLAP 434

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  ++++       L      +N++ S     +S   NIL+  L   G   +   LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 676 DLMLGKGWVPDATTHGLLVGSS 697
           + ML  G+ P  TTH  ++ +S
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDAS 516



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 121/526 (23%), Positives = 230/526 (43%), Gaps = 17/526 (3%)

Query: 180 KRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G     FV +  MV  GI  +V     L++ LF+     +A D F+ + ++   PN  
Sbjct: 169 KEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCV 228

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +I G      V+    +L EM +  I   +  Y+ I+    ++  L EA+ + + M
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
              +++P+   Y  LI+   +  +   A D+ ++M   GL   + V    V  L   G+ 
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRM 348

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           +E+    +D       P    + ++++    AGK   A  I ++M ++    D  ++N+ 
Sbjct: 349 EEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVL 408

Query: 414 IRWL-----CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           I  L      E+E        LG      + PD AT++  +   CK  N  +AL++  ++
Sbjct: 409 INGLFKLGKYESESFHTGMRQLG------LAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            +  L  +SI+ + LV+ LC   +I + +++   M   G   + ++   ++      R+ 
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D  + +       G     STY  ++    +L   +   +V   M+ +G   D+  Y  L
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I      + LK      + M+  G+ P+ ET   LL GL+    +   +  +N++     
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           V +++ Y+IL++G  K G   +   L   M+ KG+VP   T+ +L+
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 171/392 (43%), Gaps = 42/392 (10%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L++  C  G+   A  +LE M     A D  ++N  +   C+  ++  A +L+G + +
Sbjct: 21  NVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISL 80

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            ++ P+  TY+  +   CK    EDAL ++ +++ +SLV D ++Y+ ++ GLC+  K+ E
Sbjct: 81  VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEE 140

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  VF  M + G   +  S+  LI  L     V +A  L+      G  +    YT +M 
Sbjct: 141 AKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200

Query: 556 GLVK---LQRAKDLL-VVLAQMLVEGCAL------------DVEAYCILIQSMSEQNKLK 599
           GL K      A+D+  V+L + LV  C              DV    +L+Q M E++   
Sbjct: 201 GLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFP 260

Query: 600 DCALFFNV-------------------MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +  ++ ++                   MV+  ++P+     +L+ G     Q  +     
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
            ++ S     ++ + +  +N L + G   +A  L   M+ +G +PD   +  ++      
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 699 GEEIDSRRFAFD----SSSFPDSVSDILAEGL 726
           G+E D+   A +    SS F     ++L  GL
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 87/174 (50%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             V+K+M+  GI+ ++ T N L+     ++ ++ A     +M  +G  PN  T+ I++ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L A   + ++  ++ +M + G+    + Y  ++    +   ++E ++L+  M     +P 
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             TY  LI+C  +  ++  A +++++M V G+ P    +  ++ G  ++ K  E
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE 734


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 210/454 (46%), Gaps = 16/454 (3%)

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQ--KRFQHTADTYCKMILKLGLAGNVEEMEG 117
            ++P  + ++L    DL  A  IF   S +    F+H   T+  MI KL  A      E 
Sbjct: 12  QITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEE 71

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
           +   M +E+     E  +S+   +   +    A+RV   MN  G K +   +  V   +V
Sbjct: 72  MLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILV 131

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE-TNRIESALDQFRRMHKKGCCPN 236
           EE +      F YK M + G+  +V +LN L++ L + +  I++A + FR M K+GC P+
Sbjct: 132 EENQLKVAMSF-YKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPD 190

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           S T+  +I GL    +  ++  +  EM   G    +  Y+C++  LC+   ++EA+ LF 
Sbjct: 191 SYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFD 250

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M+   + P+  TY  L++ LC+N    +A ++LE M+     P    +  ++ GLC+ G
Sbjct: 251 KMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEG 310

Query: 357 KFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SW- 410
           K  E+V  L+        P    +  ++   CN  KF  A   L++M   +I+    +W 
Sbjct: 311 KLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWS 370

Query: 411 ------NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
                 N+ ++ LC N  + ++++L   M    +  D  T+ + V   CK  +   A R+
Sbjct: 371 LHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARI 430

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           F ++     V D   +S +V G     K+ EA E
Sbjct: 431 FDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFE 464



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 156/335 (46%), Gaps = 16/335 (4%)

Query: 216 NRIESALDQFRRMHKK---GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            R+   LD  R  HK    GC P  +++  V   L+  +++  ++S    M ++G++  +
Sbjct: 96  GRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSV 155

Query: 273 SFYTCIIPMLCREN-KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
                +I  LC+ +  ++ A  +F+ M      PD  TY  LIN LC+  +  +A ++ +
Sbjct: 156 VSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFK 215

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
           +M   G +P+   +  ++ GLC+ G  DE++   +        P    +++L++  C  G
Sbjct: 216 EMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNG 275

Query: 388 KFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  +LE M   R   +  +++  I  LC+  ++ +A E L RM +  + PD   Y 
Sbjct: 276 GSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYG 335

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS-------KLVEGLCQVEKITEAVEV 499
             + G C +  +++A     ++    +  + +++S        +V+GLC    +  + ++
Sbjct: 336 KIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQL 395

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           +  M   G S+ + +F+ L+   C    + KA R+
Sbjct: 396 YIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARI 430



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 177/421 (42%), Gaps = 19/421 (4%)

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D  T+  +I+ L        A ++L  M       T+++F+ I RG   V    +++   
Sbjct: 49  DHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVF 108

Query: 366 EDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
                +   P +    ++        +  +A    + M +  +     S N+ I+ LC+N
Sbjct: 109 HKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKN 168

Query: 421 E-EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              I  A+E+   M      PD  TY   + G CKL    +A  +F+++  +      ++
Sbjct: 169 SGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVT 228

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS L+ GLCQ   + EA+ +F  M K     +  +++ L+ GLC      +A+ L  +  
Sbjct: 229 YSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMV 288

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TY+ ++ GL K  +  + +  L +M ++G   D   Y  +I       K +
Sbjct: 289 RKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQ 348

Query: 600 DCALFFNVMVKAGLVPDRETML-------SLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
           + A + + MV   + P+R T          ++ GL     L+        + +    +D+
Sbjct: 349 EAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDA 408

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR--RFAFD 710
             ++ L+    K+G   +A+ + D M+  G VPD   HG+   + VG   D R  R AF+
Sbjct: 409 GTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPD---HGIW-SAVVGGFWDRRKVREAFE 464

Query: 711 S 711
           S
Sbjct: 465 S 465



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 15/369 (4%)

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALL 380
           DA  +   M   G  PTD  ++ +   L E  +   +++F +   + G   S    N L+
Sbjct: 103 DAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLI 162

Query: 381 ECCC-NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +  C N+G    A  I  +M  R    D  ++   I  LC+  +  +A EL   M     
Sbjct: 163 KALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGC 222

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P   TYS  + G C+  N ++A+ +F ++  +++  +  +YS L++GLC+     EA+E
Sbjct: 223 SPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAME 282

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M +     +  +++ LI GLC   K+ +A+         G       Y KI+ G  
Sbjct: 283 LLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFC 342

Query: 559 KLQRAKDLLVVLAQMLVEGCA-------LDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +++ ++    L +M++   +       L V+   +++Q +     L      +  M   
Sbjct: 343 NIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTR 402

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+  D  T  SL+        LH  +   +++V D  V D  +++ ++ G W      +A
Sbjct: 403 GISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREA 462

Query: 672 --SYLLDLM 678
             S +++LM
Sbjct: 463 FESIVVELM 471



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           NG     ++F ++I  L    +   A  + +         T   +  I  G  ++    D
Sbjct: 44  NGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLD 103

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            + V  +M   GC    ++Y  +   + E+N+LK    F+  M + G+     ++  L+ 
Sbjct: 104 AIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIK 163

Query: 626 GLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
            L   S     +  I + +       DS  Y  LINGL K G T +A  L   M  KG  
Sbjct: 164 ALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCS 223

Query: 685 PDATT-----HGLLVGSSVGEEI 702
           P   T     HGL    +V E +
Sbjct: 224 PSVVTYSCLMHGLCQAGNVDEAM 246



 Score = 39.3 bits (90), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 3/172 (1%)

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
           +RK        S  YS+G  +  +T+  ++  LV     +    +L +M  E C +  E 
Sbjct: 28  LRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEI 87

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           +  + +     +   D    F+ M   G  P  ++ +S+   L + +QL +  S   K +
Sbjct: 88  FLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMS-FYKYM 146

Query: 645 SDSEVLDSSM-YNILINGLWKEGLTSQASY-LLDLMLGKGWVPDATTHGLLV 694
            +  V  S +  N+LI  L K   T  A++ +   M  +G  PD+ T+G L+
Sbjct: 147 REMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLI 198


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 212/452 (46%), Gaps = 9/452 (1%)

Query: 192  EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            EM++ G V +  TL  ++    E + +  A+  F ++ K G  PN   +  +I GL    
Sbjct: 856  EMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG 915

Query: 252  RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTY 310
             V  +  +L EM   G +  +  +T +I  LC++   E A RLF K++R+ +  P+  TY
Sbjct: 916  SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 975

Query: 311  EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DK 368
              +I+  C+  +L  A  + E M   GL P  + +  ++ G C+ G F ++   +E    
Sbjct: 976  TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035

Query: 369  CGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
             G+   T  +N++++  C  G+   A  +L      +I AD  ++ I I   C+  ++ +
Sbjct: 1036 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 1095

Query: 426  AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            A   L +M      PD   Y+  +   C+    +D+ ++F +V    L     +Y+ ++ 
Sbjct: 1096 ALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMIC 1155

Query: 486  GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            G C+ +K++ AV+ F  MS +GC+  S S+  LI GLC   ++D+A +L       G S 
Sbjct: 1156 GYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 1215

Query: 546  TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               T   +     K +     +V+L ++      L +     LI+ +  + K+   ALFF
Sbjct: 1216 CEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTVHTLIRKLCCEKKVALAALFF 1272

Query: 606  NVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
            + ++   +  DR T+ +      + ++  LVS
Sbjct: 1273 HKLLDKEVNVDRVTLAAFNTACIESNKYALVS 1304



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 209/463 (45%), Gaps = 9/463 (1%)

Query: 232  GCCPNSRTFEIV--IKGLIAN-SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            G C   R  E+V  + G+ A   ++ ++V ++ +M + G+ L       II +      +
Sbjct: 753  GKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLV 812

Query: 289  EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            E A  +F  M A  + PD  TY+ +I   C N  + +A+  + +M+  G    +     I
Sbjct: 813  EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLI 872

Query: 349  VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
            +   CE    + +V F         SP    +++++   C  G    A  +LE+M     
Sbjct: 873  ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 932

Query: 405  -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYEDAL 462
              +  +    I  LC+     +A+ L  +++ S +  P+  TY+A + G CK      A 
Sbjct: 933  KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 992

Query: 463  RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             +F ++  Q LV ++ +Y+ L++G C+    ++A E+   MS  G   ++ ++N ++ GL
Sbjct: 993  MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 1052

Query: 523  CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
            C   + ++A +L +  + +       TYT ++    K       LV L +M   G   D+
Sbjct: 1053 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDI 1112

Query: 583  EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
              Y  LI +   QN +KD    F+ ++K GL P +ET  S++ G     ++ L      K
Sbjct: 1113 HLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQK 1172

Query: 643  LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
            +       DS  Y  LI+GL KE    +A  L D M+ KG  P
Sbjct: 1173 MSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 195/440 (44%), Gaps = 6/440 (1%)

Query: 192  EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            +M   G+V     +N ++ V  E   +E A + F  M  +G  P+S T++ +I G   N 
Sbjct: 786  DMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNG 845

Query: 252  RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
             V ++   + EM + G  ++ +  T II   C ++ +  A+  F  +  + L P+ + Y 
Sbjct: 846  NVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYS 905

Query: 312  ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-----E 366
             +I+ LC+   +  A ++LE+M+  G  P       ++ GLC+ G  + +          
Sbjct: 906  SMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRS 965

Query: 367  DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
            D        + A++   C   K   A+ + E+M ++  + + +++   I   C+     K
Sbjct: 966  DNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSK 1025

Query: 426  AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            AYEL+  M      P+  TY++ V G CK    E+A ++        +  D ++Y+ L+ 
Sbjct: 1026 AYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILIS 1085

Query: 486  GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
              C+   + +A+     M K G       +  LI   C    +  + +L       G + 
Sbjct: 1086 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 1145

Query: 546  TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            T  TYT ++ G  + ++    +    +M   GCA D  +Y  LI  + ++++L +    +
Sbjct: 1146 TKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 1205

Query: 606  NVMVKAGLVPDRETMLSLLH 625
            + M+  GL P   T ++L +
Sbjct: 1206 DTMIDKGLSPCEVTRVTLTY 1225



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 154/343 (44%), Gaps = 11/343 (3%)

Query: 99   YCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            Y  MI  L   G+V++   L + MVK  + PNV     SL+           A R+ + +
Sbjct: 904  YSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY-THTSLIHGLCKKGWTERAFRLFLKL 962

Query: 158  -NSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
              S  +K +V  +  ++ G   EEK   A+ +F  + M + G+VPN +T   L++   + 
Sbjct: 963  IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF--ERMKEQGLVPNTNTYTTLIDGHCKA 1020

Query: 216  NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
                 A +    M  +G  PN+ T+  ++ GL    R +++  +L   F   I+ +   Y
Sbjct: 1021 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 1080

Query: 276  TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
            T +I   C+   + +A+     M  +   PD   Y  LI   C    + D+  + +++I 
Sbjct: 1081 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIK 1140

Query: 336  IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            +GL PT + +  ++ G C   K   +V F +    +  +P    + AL+   C   +   
Sbjct: 1141 LGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDE 1200

Query: 392  AKCILEKMADRKIADCDSWNIPIRW-LCENEEIRKAYELLGRM 433
            A+ + + M D+ ++ C+   + + +  C+ E+   A  +L R+
Sbjct: 1201 ARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 1243



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 142/351 (40%), Gaps = 6/351 (1%)

Query: 352  LCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
              E+GK  E+V+ + D    G V  T   N ++           A  + ++M+ R +  D
Sbjct: 771  FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 407  CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
              ++   I   C N  + +A   +  M+    V D AT +  +   C+      A+  F 
Sbjct: 831  SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 467  QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +V+   L  + I+YS ++ GLC+   + +A E+   M KNG   +  +   LI+GLC   
Sbjct: 891  KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 527  KVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
              ++A RL   L  S        TYT ++ G  K ++     ++  +M  +G   +   Y
Sbjct: 951  WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 1010

Query: 586  CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
              LI    +            +M   G  P+  T  S++ GL    +       +N    
Sbjct: 1011 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 1070

Query: 646  DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            +    D   Y ILI+   K    +QA   L+ M   G+ PD   +  L+ +
Sbjct: 1071 NQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 1121


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 214/453 (47%), Gaps = 8/453 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F + + ++  MV++  +P++     LL V+ +  + +  ++  + +   G   +  T  +
Sbjct: 52  FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++     +S+   + S LG++  LG + ++  +T +I   C  N++EEA+ +   M  + 
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG 171

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           + PD + Y  +I+ LC+N  +D+A  +   M   G+ P   ++  +V GLC  G++ ++ 
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWL 417
             L         P     NAL++     GK   AK +  +M    IA +  ++   I  L
Sbjct: 232 LLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C    + +A ++   M      PD   Y++ + G CK    EDA+++F ++S + L  ++
Sbjct: 292 CMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           I+Y+ L++G   V K   A EVF  M   G   +  ++N+L++ LC   KV+KA+ +   
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFED 411

Query: 538 AYS---SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G      TY  ++ GL    + +  L+V   M      + +  Y I+IQ M +
Sbjct: 412 MQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCK 471

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             K+KD    F  +   G+ P+  T  +++ GL
Sbjct: 472 AGKVKDALNLFCSLPSKGVKPNVVTYTTMISGL 504



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 213/472 (45%), Gaps = 12/472 (2%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +   ALD F  M +    P+   F  ++  +    + D  +++   +  +G+  +L  YT
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDL--YT 108

Query: 277 CIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           C + M   C+ ++   A      +  L   PD  T+  LIN  C   R+++A  ++  M+
Sbjct: 109 CNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            +G+ P   ++  I+  LC+ G  D +++       Y   P    + +L+   CN+G++ 
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +L  M  RKI  D  ++N  I    +  ++  A EL   M+  S+ P+  TY++ +
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G C     ++A ++F  +  +    D ++Y+ L+ G C+ +K+ +A+++F  MS+ G +
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            ++ ++  LI G  ++ K + A  +     S G      TY  ++  L    +    L++
Sbjct: 349 GNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMI 408

Query: 570 LAQML---VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
              M    ++G   ++  Y +L+  +    KL+   + F  M K  +     T   ++ G
Sbjct: 409 FEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQG 468

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           +    ++    +    L S     +   Y  +I+GL++EGL  +A  L   M
Sbjct: 469 MCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKM 520



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 19/390 (4%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYK 191
              SL+  F    R+  AM ++  M   G K  V ++  ++ ++   K G  D    ++ 
Sbjct: 143 TFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLC--KNGHVDNALSLFN 200

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   GI P+V     L+  L  + R   A    R M K+   P+  TF  +I   +   
Sbjct: 201 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEG 260

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++ D+  +  EM  + I   +  YT +I  LC E +L+EA ++F +M      PD + Y 
Sbjct: 261 KLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYT 320

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LIN  C+  +++DA  I  +M   GLT     +  +++G   VGK     N  ++  G+
Sbjct: 321 SLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGK----PNVAQEVFGH 376

Query: 372 VTS--------PHNALLECCCNAGKFFLAKCILEKMADRKI----ADCDSWNIPIRWLCE 419
           + S         +N LL C C  GK   A  I E M  R+I     +  ++N+ +  LC 
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N ++ KA  + G M    +     TY+  + G CK    +DAL +F  + ++ +  + ++
Sbjct: 437 NGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVT 496

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
           Y+ ++ GL +   + EA  +F  M ++G S
Sbjct: 497 YTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 176/376 (46%), Gaps = 8/376 (2%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +++K G  P++ T   L+      NRIE A+    +M + G  P+   +  +I  L  N 
Sbjct: 131 KLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNG 190

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            VD+++S+  +M + GI+ ++  YT ++  LC   +  +A  L + M    + PD +T+ 
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN---FLEDK 368
            LI+   +  +L DA ++  +MI + + P    +  ++ GLC  G+ DE+      +E K
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK 310

Query: 369 -CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
            C      + +L+   C   K   A  I  +M+ + +  +  ++   I+      +   A
Sbjct: 311 GCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL--VLDSI-SYSKL 483
            E+ G MV   V P+  TY+  +   C       AL +F  +  + +  V  +I +Y+ L
Sbjct: 371 QEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVL 430

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC   K+ +A+ VF  M K    +   ++ I+I G+C   KV  A+ L     S G 
Sbjct: 431 LHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGV 490

Query: 544 SYTTSTYTKIMLGLVK 559
                TYT ++ GL +
Sbjct: 491 KPNVVTYTTMISGLFR 506



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 10/291 (3%)

Query: 414 IRWLCENEEI----------RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           +R  C   EI           +A +L   MV S  +P    ++  +    K+  ++  + 
Sbjct: 33  VRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN 92

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           + + +    +  D  + + L+   CQ  +   A      + K G      +F  LI G C
Sbjct: 93  LCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFC 152

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
           +  ++++A+ + +     G       YT I+  L K     + L +  QM   G   DV 
Sbjct: 153 LGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVV 212

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y  L+  +    + +D  L    M+K  + PD  T  +L+       +L       N++
Sbjct: 213 MYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEM 272

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +  S   +   Y  LINGL  EG   +A  +  LM  KG  PD   +  L+
Sbjct: 273 IQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 4/246 (1%)

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           N   AL   R +     V    +Y +++       +  EA+++F  M ++    S   F 
Sbjct: 16  NSGKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFT 75

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV--VLAQML 574
            L+  +  M+K D  I L       G S     YT  +L     Q ++  L    L +++
Sbjct: 76  RLLNVIAKMKKFDVVINLCKHLQIMGVS--NDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D+  +  LI      N++++     N MV+ G+ PD     +++  L     + 
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              S  N++ +     D  MY  L+NGL   G    A  LL  M+ +   PD  T   L+
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253

Query: 695 GSSVGE 700
            + V E
Sbjct: 254 DAFVKE 259


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 272/638 (42%), Gaps = 30/638 (4%)

Query: 75  DLSSALKIFKWVSIQ-KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER---YPNV 130
           DL   LK    VS     F+H++ +   M+  L     + E +     MV++       V
Sbjct: 113 DLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKV 172

Query: 131 REALIS--------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
            E+LIS              LV ++V   ++         +   G  +S++  N +LG +
Sbjct: 173 VESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGL 232

Query: 177 VEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
           V  + G+ D  + +Y E+V+ GI  NV TLN ++  L +  + E+ +     M  KG   
Sbjct: 233 V--RTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFA 290

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           +  T+  +I        V+++  +L      G++  L  Y  I+  LC+  K + A  + 
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M  L L P+  TY  L+  +C    + +A +I ++M   G+ P    F  ++  L   
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410

Query: 356 GKFDESV-NFLE-DKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRK-IADCD 408
           G   +++ +F E ++ G V  P N     L++  C  G    A  + ++M  R    D  
Sbjct: 411 GHLYQALMHFREMERSGIV--PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  +  LC+ +    A  L   MV   +VPD  T++  + G CK  N + AL +F  +
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
              +L  D ++Y+ L++G C+  ++  A E++  M +        S+  ++ G C    +
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
            +A+ L       G      T   ++ G  +          L++M+  G   D  +Y  L
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I    ++  L+   +  N M K GL  +  T   +L+G     ++      + K++    
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGI 708

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
             D + Y+ LING   +    +A    D ML +G VPD
Sbjct: 709 NPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 185/427 (43%), Gaps = 9/427 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++    +  KL E    F+++R   +        +L+  L     +D A +I  +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG------YVTSPHNALLECCCNAGK 388
             G+         +V  LC+  KF+  + FL D  G       VT  +N L+   C  G 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVT--YNTLINAYCREGL 307

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +L   + R +     ++N  +  LC+  +  +A ++L  M+   + P+ ATY+ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            ++  C+  N  +A  +F ++S + ++ D +S+S L+  L +   + +A+  F  M ++G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
               +  + ILI G C    +  A+++R    + G      TY   + GL K +   D  
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           ++  +M+  G   D   +  LI+   +   +      F  MV+  L PD+ T  +L+ G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               ++       + ++    + D   Y  ++NG    GL  +A  L D ML KG  P+ 
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 688 TTHGLLV 694
            T   L+
Sbjct: 608 VTCNTLI 614



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 76/151 (50%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M++ GI PN+ T N L++    +  +  A +   +M   G  P+S ++  +I G +  +
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            ++ +  ++ EM   G+Q  +  Y  I+   C E K++EA ++ + M  + + PD  TY 
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            LIN       + +A    ++M+  GL P D
Sbjct: 717 SLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/552 (22%), Positives = 249/552 (45%), Gaps = 45/552 (8%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D +++Y EM    +VP+V T   ++  L ++ ++E A   FR M + G  PN  ++  +I
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLI 164

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
             L     V ++  + G M   GI  ++  YT ++  L +      A  +F+++    L+
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+ +TY  LI+  C+   ++    +L++M    + P   V+  IV G  + G  +E+++ 
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIAD----CDSWNIPIRW 416
           +         P    +  L++    A +  +A  + ++M  R + +     DS+   +  
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF---VNN 341

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           L  +  + +A EL   M+   ++PD   Y++ + G  K     DA  + ++++ +S   D
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 477 SISYSKLVEGL----------------------------------CQVEKITEAVEVFCC 502
            ++Y+ L+ GL                                  C+   +  A+++   
Sbjct: 402 VVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   G   +S + NIL+  LC   +++K + L +     G   T +T+  ++    K +R
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
           A  +L    Q++  G  LD+  Y  LI +      ++   L F  M+  G++ D  T  +
Sbjct: 522 ADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           L+HG    S L    +  ++++++    +   YNIL+ GL    L  +A+ L++ M  +G
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 683 WVPDATTHGLLV 694
            VP+ATT+ +LV
Sbjct: 642 LVPNATTYDILV 653



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 220/511 (43%), Gaps = 16/511 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM +  I PNV   + +++   +   +  A+D  R+M ++   PN   +  +I G    
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +   ++ +  EM   G++         +  L R  ++EEA  LFK M +  L+PD + Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD-ESVNFLEDKC 369
             +++   +  +  DA +I ++M           +  ++ GL ++GK++ ES +    + 
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 370 GYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           G    ++  N ++   C  G    A  +L +M    +  +  + NI ++ LC   EI K 
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +LL  M+V    P   T+ A +    K    +  L    Q+    + LD  +Y+ L+  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIST 550

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C++  I  A  VF  M   G      ++N LI+G C+   + KA  + S   + G S  
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ GL   +  K+   ++ QM   G   +   Y IL+    +   +K+C   + 
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW--- 663
            M+  G VP   T   L+   A G ++      + ++       +SS Y+ILI G +   
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 664 ---------KEGLTSQASYLLDLMLGKGWVP 685
                    K    ++A  L + M  KG++P
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/502 (21%), Positives = 226/502 (45%), Gaps = 6/502 (1%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +V+  N L++       I  A++    M  +G  P+  T+  ++ G      +  +  ++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
           GE+  + ++  +  YT +I   C+   LE+A+ ++  M    L+PD +TY  ++N LC++
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSPH 376
            ++++A  +  +M  +G+ P    +  ++  L + G   E+       +    G+    +
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 377 NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
            AL++    AG    A+ + + + +   + +C +++  I   C+  ++ K   LL  M  
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P+   YS+ V G  K     +A+ V R++  ++++ +   Y  L++G  + ++   
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+++F  M   G   ++   +  +  L    ++++A  L     S G       YT +M 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K  +  D   +  +M  +    DV AY +LI  + +  K +  + F   M + GL P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES-FHTGMRQLGLAP 434

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  ++++       L      +N++ S     +S   NIL+  L   G   +   LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 676 DLMLGKGWVPDATTHGLLVGSS 697
           + ML  G+ P  TTH  ++ +S
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDAS 516



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 237/561 (42%), Gaps = 52/561 (9%)

Query: 180 KRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G     FV +  MV  GI  +V     L++ LF+     +A D F+ + ++   PN  
Sbjct: 169 KEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCV 228

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +I G      V+    +L EM +  I   +  Y+ I+    ++  L EA+ + + M
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
              +++P+   Y  LI+   +  +   A D+ ++M   GL   + V    V  L   G+ 
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRM 348

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           +E+    +D       P    + ++++    AGK   A  I ++M ++    D  ++N+ 
Sbjct: 349 EEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVL 408

Query: 414 IRWL-----CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           I  L      E+E        LG      + PD AT++  +   CK  N  +AL++  ++
Sbjct: 409 INGLFKLGKYESESFHTGMRQLG------LAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM-------------------SKN--- 506
            +  L  +SI+ + LV+ LC   +I + +++   M                   SK+   
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 507 -------------GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
                        G  L  S++N LI   C +  + +A  +       G      TY  +
Sbjct: 523 DVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G       K    V +QML EG + +VE Y IL+  +S    +K+ A   N M + GL
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
           VP+  T   L+ G      +        ++++   V  +  YN+LI+   K    SQA  
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKE 702

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           L+  M  +G  P+++T+ +L+
Sbjct: 703 LMQEMQVRGIPPNSSTYDILI 723



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 171/392 (43%), Gaps = 42/392 (10%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L++  C  G+   A  +LE M     A D  ++N  +   C+  ++  A +L+G + +
Sbjct: 21  NVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISL 80

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            ++ P+  TY+  +   CK    EDAL ++ +++ +SLV D ++Y+ ++ GLC+  K+ E
Sbjct: 81  VNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEE 140

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  VF  M + G   +  S+  LI  L     V +A  L+      G  +    YT +M 
Sbjct: 141 AKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200

Query: 556 GLVK---LQRAKDLL-VVLAQMLVEGCAL------------DVEAYCILIQSMSEQNKLK 599
           GL K      A+D+  V+L + LV  C              DV    +L+Q M E++   
Sbjct: 201 GLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFP 260

Query: 600 DCALFFNV-------------------MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +  ++ ++                   MV+  ++P+     +L+ G     Q  +     
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
            ++ S     ++ + +  +N L + G   +A  L   M+ +G +PD   +  ++      
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 699 GEEIDSRRFAFD----SSSFPDSVSDILAEGL 726
           G+E D+   A +    SS F     ++L  GL
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 87/174 (50%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             V+K+M+  GI+ ++ T N L+     ++ ++ A     +M  +G  PN  T+ I++ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L A   + ++  ++ +M + G+    + Y  ++    +   ++E ++L+  M     +P 
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             TY  LI+C  +  ++  A +++++M V G+ P    +  ++ G  ++ K  E
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE 734


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 206/477 (43%), Gaps = 5/477 (1%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A+ QF RM      P    F  ++           +VS+   +   GIQ +L     
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C   ++     +   +      PD +T   LI  LC   ++  A    + ++  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
                  +  ++ G+C++G    ++ FL    G +T P    +N +++  C       A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +  +MA + I AD  ++N  I   C   ++++A  LL  MV+ ++ P+  TY+  V   
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK    ++A  V   +    +  D I+YS L++G   V ++ +A  VF  MS  G +   
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++ ILI G C  + VD+A+ L    +         TY+ ++ GL K  R   +  ++ +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   DV  Y  LI  + +   L      FN M    + P+  T   LL GL  G +
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           L         L++    L+   YN++ING  K+GL  +A  +L  M   G +P+A T
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/494 (21%), Positives = 207/494 (41%), Gaps = 66/494 (13%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +  + K  ++  V +   +   GI P++ TLN L+       +I        ++
Sbjct: 62  FNKILDSFAKMKH-YSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P++ T   +IKGL    +V  ++    ++   G QL    Y  +I  +C+    
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 180

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI+  + +      PD + Y  +I+ +C+   + +A  +  +M V G++     +  +
Sbjct: 181 RAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           + G C VGK  E++  L +      +P                              +  
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINP------------------------------NVY 270

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA--------------------- 447
           ++NI +  LC+  ++++A  +L  M+ + V PD  TYS                      
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 448 --------------FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                          + G CK    ++AL +F+++  +++V   ++YS L++GLC+  +I
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
           +   ++   M   G      +++ LI GLC    +D+AI L +            T+T +
Sbjct: 391 SYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + GL K  R KD   V   +L +G  L+V  Y ++I    +Q  L++     + M   G 
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510

Query: 614 VPDRETMLSLLHGL 627
           +P+  T  +++  L
Sbjct: 511 IPNAFTFETIIIAL 524



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 32/443 (7%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+VS    M  +     +  +  I+    +      A+ L   +    + PD +T   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LINC C   ++     +L  ++  G  P       +++GLC  G+  ++++F        
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF-------- 151

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
              H+ LL     A  F L +               S+   I  +C+  + R A + L +
Sbjct: 152 ---HDKLL-----AQGFQLNQV--------------SYATLINGVCKIGDTRAAIKFLRK 189

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +      PD   Y+  +   CK     +A  +F +++ + +  D ++Y+ L+ G C V K
Sbjct: 190 IDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGK 249

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA+ +   M     + +  ++NIL+  LC   KV +A  + ++   +       TY+ 
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL-FFNVMVKA 611
           +M G   +   K    V   M + G   DV  Y ILI     +NK+ D AL  F  M + 
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC-KNKMVDEALNLFKEMHQK 368

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +VP   T  SL+ GL    ++  V   I+++    +  D   Y+ LI+GL K G   +A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             L + M  +   P+  T  +L+
Sbjct: 429 IALFNKMKDQEIRPNIFTFTILL 451



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 9/272 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    + G ++E  GL   MV K   PNV    I LV +     +V  A  VL  
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNI-LVDALCKEGKVKEAKSVLAV 294

Query: 157 MNSGGFKLSVDVFNVVLGA---IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           M     K  V  ++ ++     + E K+       V+  M   G+ P+V T   L+    
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKA----QHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +   ++ AL+ F+ MH+K   P   T+  +I GL  + R+     ++ EM D G   ++ 
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI 410

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y+ +I  LC+   L+ AI LF  M+  ++ P+  T+  L++ LC+  RL DA ++ +D+
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +  G       +  ++ G C+ G  +E++  L
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 130/302 (43%), Gaps = 1/302 (0%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + +  A     RM+     P    ++  +    K+ +Y  A+ +  ++  + +  D I+ 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+   C + +IT    V   + K G    + + N LI GLC+  +V KA+       +
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G      +Y  ++ G+ K+   +  +  L ++       DV  Y  +I +M +   + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M   G+  D  T  +L++G     +L      +N++V  +   +   YNIL++
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSFPDSVS 719
            L KEG   +A  +L +ML     PD  T+  L+ G  +  E+   +  F++ S      
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 720 DI 721
           D+
Sbjct: 338 DV 339



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 4/212 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V    I L+  F  +  V+ A+ +   M+       +  ++ ++  +   K G   +V
Sbjct: 337 PDVHTYTI-LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC--KSGRISYV 393

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + +  EM   G   +V T + L++ L +   ++ A+  F +M  +   PN  TF I++ G
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+ D+  +  ++   G  L +  Y  +I   C++  LEEA+ +   M     +P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGL 338
             T+E +I  L +    D A  +L  MI  GL
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARGL 545


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 217/461 (47%), Gaps = 23/461 (4%)

Query: 139 FSFVNHYRVNGAM---RVLVNMNSGGF--KLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
           F F NH+ +N +    +  +  N+GGF    S D+             G  D +  +  M
Sbjct: 31  FLFSNHHHLNTSTCTKKPSLPQNNGGFVSNNSNDI-------------GIDDAMASFYRM 77

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
           +     P+   L   L  + +  +  + +    +M   G   N  T  I+I  L   S +
Sbjct: 78  IHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHI 137

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             +VS+L +MF LGIQ +   +T +I  LC E +++EA+ LF  M   D MP+ +T+  L
Sbjct: 138 HFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTIL 197

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           ++ LC+   + +A  + E M   G+ P    +  ++ G C   + +++    E   G   
Sbjct: 198 VDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGC 257

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYE 428
           +P    ++ L+   C + +   AK +L +M++++ I +  ++N  ++ LC    + +A E
Sbjct: 258 APSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQE 317

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L  +M  S ++P+  TYS  + G CK  + E+AL++   +  + L  D + Y+ L++G+ 
Sbjct: 318 LFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMF 377

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              K+  A E+F  +  NG   S  ++NI+I GL      D+A +L       G    + 
Sbjct: 378 IAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSC 437

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           +Y  I+ G ++ Q     + ++ +M+    + D   + +L+
Sbjct: 438 SYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 189/468 (40%), Gaps = 42/468 (8%)

Query: 246 GLIANSR----VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           G ++N+     +DD+++    M  +  +         +  + ++ +    + L   M   
Sbjct: 56  GFVSNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLF 115

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
            +  ++ T   LIN LC    +  A  +L  M  +G+ P    F  ++ GLC  G+  E+
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175

Query: 362 VNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
           V    +  G    P+      L++  C  G    A+C+ E M ++               
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEK--------------- 220

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
                               V P+  TY+A + G C      DA +VF  +  +      
Sbjct: 221 -------------------GVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSV 261

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            SYS L+ G C+  +I EA  +   MS+     ++ ++N L+ GLC    + +A  L   
Sbjct: 262 HSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKK 321

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             SSG      TY+ ++ GL K    ++ L +L  M       D+  Y ILIQ M    K
Sbjct: 322 MCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGK 381

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L+     F+ +   G+ P   T   ++ GL              K+  D  + DS  YN+
Sbjct: 382 LEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNV 441

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           +I G  +    S A  L+D M+G+ +  D++T  +L+     +EI SR
Sbjct: 442 IIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESHDEIISR 489



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 156/350 (44%), Gaps = 12/350 (3%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+   C       A  +L KM    I  D  ++   I  LC    I++A EL   M  
Sbjct: 125 NILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG 184

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
              +P+  T++  V   CK     +A  VF  ++ + +  +  +Y+ L+ G C   ++ +
Sbjct: 185 RDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMND 244

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A +VF  M   GC+ S  S++ILI G C  R++D+A  L +          T TY  +M 
Sbjct: 245 ASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQ 304

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL       +   +  +M   G   ++  Y IL+  + +   L++       M +  L P
Sbjct: 305 GLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEP 364

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D      L+ G+    +L +     +KL ++        YNI+I GL KEGL+ +A  L 
Sbjct: 365 DIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLF 424

Query: 676 DLMLGKGWVPDATTHGLLVGSSVG-----------EEIDSRRFAFDSSSF 714
             M   G++PD+ ++ +++   +            +E+  RRF+ DSS+F
Sbjct: 425 RKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTF 474



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 179/412 (43%), Gaps = 5/412 (1%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I+ A+  F RM      P+       +  +    +    VS+  +M   G+         
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I  LCR + +  A+ +   M  L + PD +T+  LIN LC   R+ +A ++  +M    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             P    F  +V  LC+ G   E+    E        P    +NAL+   C   +   A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + E M  +  A    S++I I   C++  I +A  LL +M    ++P+  TY+  + G 
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C   +  +A  +F+++ +  ++ +  +YS L++GLC+   + EA+++   M +       
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             +NILI G+ +  K++ A  L S  +++G   +  TY  ++ GL+K   + +   +  +
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           M  +G   D  +Y ++IQ   +           + MV      D  T   LL
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 5/168 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKE-RYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  ++  L  A ++ E + L + M      PN+R   I L+     H  +  A+++L +
Sbjct: 298 TYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSI-LLDGLCKHGHLEEALKLLTS 356

Query: 157 MNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M     +  + ++N+++ G  +  K   A  +F   ++   GI P+V T N +++ L + 
Sbjct: 357 MQERKLEPDIVLYNILIQGMFIAGKLEVAKELF--SKLFANGIRPSVRTYNIMIKGLLKE 414

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
              + A   FR+M   G  P+S ++ ++I+G + N     ++ ++ EM
Sbjct: 415 GLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/541 (24%), Positives = 232/541 (42%), Gaps = 30/541 (5%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G VP++ + N+L+  L E  +I+ A+  +R + + G  PN  T+ I IK L      +
Sbjct: 185 RRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFE 244

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++V +  EM + G+       +  I  LC   + +      + +RA +   D   Y  +I
Sbjct: 245 EAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVI 304

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
              C  ++L +A D+  DM+  G+ P   ++  ++   C+ G   ++V            
Sbjct: 305 RGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVAL---------- 354

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            HN ++    N  K  L     E        D   +NI +  LC+  ++ +A ELL  M 
Sbjct: 355 -HNDMVS---NGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMK 410

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  D   Y+  + G C      DA  +F ++  + +  D ++Y+ LV G  +     
Sbjct: 411 GRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKK 470

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA+E+  C+   G   +S++ N +I GLC+  KV +A        ++        Y+ ++
Sbjct: 471 EALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA----EAFLNTLEDKCLENYSAMV 526

Query: 555 LGLVK---LQRAKDLLVVLA-QMLVEGCALDVEA----YCILIQSMSEQNKLKDCALFFN 606
            G  K    ++A +L   L+ Q ++   ALDVE     Y  LI +      +K   L F+
Sbjct: 527 DGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFD 586

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           ++V+ G+ PD  T   +++G    + L       N +       D   Y ++++G  K  
Sbjct: 587 MLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTN 646

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGL 726
               A  L D M+ +G  PD  T+  L+         SR   FD+    +    ILA+  
Sbjct: 647 NLQDAINLYDEMIARGLQPDIVTYTALLPGKC--NFGSRH--FDNQWLEEPKLFILAQPR 702

Query: 727 G 727
           G
Sbjct: 703 G 703



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/487 (21%), Positives = 210/487 (43%), Gaps = 53/487 (10%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV----EEMEGLCQ 120
           HL R+  N ND +  + I K +  +  F+   D + +M  + G+  N       +EGLC 
Sbjct: 217 HLKRLGLNPNDYTYGIFI-KALCRKGNFEEAVDVFREM-EEAGVNPNAVTCSTYIEGLCS 274

Query: 121 N------------MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           +            +    +P    A  +++  F +  ++  A  V ++M + G      +
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +  ++ A  +        V ++ +MV  GI  N+                   +DQF+  
Sbjct: 335 YGALIHAYCKAG-NLLQAVALHNDMVSNGIKTNL-------------------VDQFKEF 374

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G   +   + IV+  L    +V+++V +L EM    + L++  YT +I   C + KL
Sbjct: 375 RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKL 434

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A  +F+ M+   + PD +TY  L+     N    +A ++L+ +   GL P       I
Sbjct: 435 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 494

Query: 349 VRGLCEVGKFDES---VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
           + GLC  GK  E+   +N LEDKC      ++A+++  C A     A  +  +++ + I 
Sbjct: 495 IEGLCMAGKVKEAEAFLNTLEDKC---LENYSAMVDGYCKANFTRKAYELFSRLSKQGIL 551

Query: 406 DCDSWNIP---------IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
              + ++          I   C + ++++A  +   +V   + PD  TY+  + G C++ 
Sbjct: 552 RMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 611

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              +A  +F  +  + +  D I+Y+ +++G  +   + +A+ ++  M   G      ++ 
Sbjct: 612 CLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYT 671

Query: 517 ILIYGLC 523
            L+ G C
Sbjct: 672 ALLPGKC 678



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 9/177 (5%)

Query: 214 ETNRIESALDQFRRMHKKGCC--------PNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + N    A + F R+ K+G          PN   +  +I     +  +  +  +   + +
Sbjct: 531 KANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE 590

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI  ++  YT +I   CR N L EA  +F  M+   + PD +TY  +++   +   L D
Sbjct: 591 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQD 650

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSPHNALLE 381
           A ++ ++MI  GL P    +  ++ G C  G       +LE+ K   +  P    LE
Sbjct: 651 AINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKLFILAQPRGVRLE 707



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 6/126 (4%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  +V+ GI P+V T   ++      N +  A D F  M ++G  P+  T+ +V+ G  
Sbjct: 584 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHS 643

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR------ENKLEEAIRLFKMMRALD 302
             + + D++++  EM   G+Q ++  YT ++P  C       +N+  E  +LF + +   
Sbjct: 644 KTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKLFILAQPRG 703

Query: 303 LMPDEL 308
           +  +E+
Sbjct: 704 VRLEEM 709


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 143/608 (23%), Positives = 264/608 (43%), Gaps = 57/608 (9%)

Query: 16  KWVNLTSCISSLSCANTIPLSS--ETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNT 73
           K  N  +  SS +   T P S   +T  I       + +K++++    +P  L++ L N+
Sbjct: 24  KLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNS 83

Query: 74  NDLSS-ALKIFKWVSIQKRFQ--HTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNV 130
                  L  FKW   QK F   H  + +C+++  L  A N  ++  L  +  K  + + 
Sbjct: 84  EAQPDLILCYFKWT--QKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSN 141

Query: 131 REALISL-----------------VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
                SL                 V+++V +  ++ A+         GF+LS    N +L
Sbjct: 142 STIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 174 GAIVEEKR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
            ++V+E R G  + V  YKEM++  I  NV T + ++  L +  + + A D    M   G
Sbjct: 202 VSLVKEGRIGVVESV--YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P+  T+  +I G     ++  + ++L EM    I      +  +I   CR+  +  A 
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           ++F+ M+   L P+ +TY  LIN LC N +LD+A  + + M  +GL P    +  ++ G 
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 353 CEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
           C+     E+   L+D                   GK  LA  ++            ++N 
Sbjct: 380 CKKKMLKEAREMLDD------------------IGKRGLAPNVI------------TFNT 409

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I    +   +  A+ L   M+ + V P+ +TY+  ++G C+  N ++A ++ +++    
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  D ++Y+ LV+ LC+  +  +AV +   M + G + S  ++N LI G         A+
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            +R+L    G      TY  ++ G     + ++   +L +ML +G   +   Y IL   M
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 589

Query: 593 SEQNKLKD 600
            E+  + D
Sbjct: 590 MEKGFIPD 597



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/527 (23%), Positives = 238/527 (45%), Gaps = 54/527 (10%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFET---NRIESALDQFRRMHKKGCCPNSRTFEI 242
           F +  KE    G + NV+    LL +L      N+I + LD F +               
Sbjct: 94  FKWTQKEF---GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAK--------------- 135

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC----IIPMLC----RENKLEEAIRL 294
                 +NS +  S+S+LG             + C    I+ ML     +  +++ A+  
Sbjct: 136 --NAHYSNSTIFHSLSVLGS------------WGCANSIIVDMLVWAYVKNGEMDLALEG 181

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           F            L+   ++  L +  R+     + ++MI   +      F  ++ GLC+
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-S 409
           VGKF ++ + +ED   +  SP    +N +++  C AGK F A  +L++M  ++I   + +
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +NI I   C +E +  A ++   M    + P+  TY++ + G C     ++AL +  ++S
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
              L  + ++Y+ L+ G C+ + + EA E+   + K G + +  +FN LI       ++D
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  LRS+   +G     STY  +++G  +    K+   +  +M   G   D+  Y IL+
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL---ADGSQLHLVSSGINKLVSD 646
            ++ ++ + +      + M + GL P   T  +L+ G     + +    V + + K    
Sbjct: 482 DALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRR 541

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           + ++    YN+LI G   +G   +A+ LL+ ML KG +P+ TT+ +L
Sbjct: 542 ANIV---TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 1/319 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N +L      G+  + + + ++M  R+I  +  ++++ I  LC+  + +KA +++  M  
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               P   TY+  + G CK      A  + +++ A+ +  + I+++ L++G C+ E +T 
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A +VF  M + G   +  ++N LI GLC   K+D+A+ L+      G      TY  ++ 
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K +  K+   +L  +   G A +V  +  LI +  +  ++ D  L  ++M+  G+ P
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T   L+ G      +        ++  +    D   YNIL++ L K+G T +A  LL
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 676 DLMLGKGWVPDATTHGLLV 694
           D M   G  P   T+  L+
Sbjct: 498 DEMFEVGLNPSHLTYNALI 516



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 87/234 (37%), Gaps = 35/234 (14%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           AL  F +       L ++S + ++  L +  +I     V+  M +    ++  +F+++I 
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC + K  KA  +     + G S +  TY  I+ G  K  +      +L +M+ +    
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           +   + ILI        +      F  M + GL P+  T                     
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT--------------------- 336

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                         YN LINGL   G   +A  L D M G G  P+  T+  L+
Sbjct: 337 --------------YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 182/388 (46%), Gaps = 33/388 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+       R   A+ VL  M        V  + ++L A  + + G+   + +  EM  
Sbjct: 37  TLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK-RSGYKQAMKLLDEMRD 95

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  P++ T N ++  + +  R++ A++  + +   GC PN+ ++ IV+KGL    R +D
Sbjct: 96  KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 155

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++GEM   G    +  +  +I  LCR+  +E A+ + + +      P+ L+Y  L++
Sbjct: 156 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLH 215

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C+  ++D A   L+ M+  G  P      DIV                          
Sbjct: 216 AFCKQKKMDKAMAFLDLMVSRGCYP------DIVS------------------------- 244

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N LL   C +G+  +A  +L ++ D+  A    S+N  I  L +  + ++A ELL  MV
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              + PD  TYS    G C+    EDA+R F +V    +  +++ Y+ ++ GLC+  +  
Sbjct: 305 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 364

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            A+++F  M  NGC  + S++ ILI GL
Sbjct: 365 SAIDLFAYMIGNGCMPNESTYTILIEGL 392



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 185/394 (46%), Gaps = 8/394 (2%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P+  T N L+  L    R  +AL     M ++ C P+  T+ I+++     S    ++
Sbjct: 28  VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +L EM D G   ++  Y  ++  +C+E ++++AI   K + +    P+ ++Y  ++  L
Sbjct: 88  KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
           C   R +DA +++ +M   G  P    F  ++  LC  G  + ++  LE    Y  +P  
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 207

Query: 376 --HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGR 432
             +N LL   C   K   A   L+ M  R    D  S+N  +  LC + E+  A ELL +
Sbjct: 208 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +      P   +Y+  + G  K    ++AL +  ++ ++ L  D I+YS +  GLC+ ++
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 327

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           I +A+  F  +   G   ++  +N +I GLC  R+   AI L +    +G     STYT 
Sbjct: 328 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387

Query: 553 IMLGLVK---LQRAKDLLVVLAQMLVEGCALDVE 583
           ++ GL     ++ A+DLL  L     E   LDV 
Sbjct: 388 LIEGLAYEGLIKEARDLLDELCSRAGEEILLDVH 421



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 189/438 (43%), Gaps = 33/438 (7%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
            +  ++ G     ++D +  ++ EM    ++ +   Y  +I  LC   +   A+ +   M
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                +PD +TY  L+   C+      A  +L++M   G TP    +  +V G+C+ G+ 
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
           D+++ FL++   Y   P+                                S+NI ++ LC
Sbjct: 119 DDAIEFLKNLPSYGCEPNTV------------------------------SYNIVLKGLC 148

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
             E    A EL+G M      P+  T++  +   C+    E AL V  Q+       +S+
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           SY+ L+   C+ +K+ +A+     M   GC     S+N L+  LC   +VD A+ L    
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G +    +Y  ++ GL K  + K+ L +L +M+ +G   D+  Y  +   +  ++++
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           +D    F  +   G+ P+     +++ GL    + H        ++ +  + + S Y IL
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 388

Query: 659 INGLWKEGLTSQASYLLD 676
           I GL  EGL  +A  LLD
Sbjct: 389 IEGLAYEGLIKEARDLLD 406



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 168/387 (43%), Gaps = 43/387 (11%)

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           +V G C  G+ D +   + +       P    +N L+   C  G+   A  +L++M  R+
Sbjct: 6   MVAGYCGAGQLDAARRLVAE---MPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 62

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + D  ++ I +   C+    ++A +LL  M      PD  TY+  V G C+    +DA+
Sbjct: 63  CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 122

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEK------------------------------ 492
              + + +     +++SY+ +++GLC  E+                              
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 182

Query: 493 -----ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
                +  A+EV   + K GC+ +S S+N L++  C  +K+DKA+    L  S G     
Sbjct: 183 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 242

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +Y  ++  L +       + +L Q+  +GCA  + +Y  +I  +++  K K+     N 
Sbjct: 243 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 302

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           MV  GL PD  T  ++  GL    ++        K+       ++ +YN +I GL K   
Sbjct: 303 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 362

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
           T  A  L   M+G G +P+ +T+ +L+
Sbjct: 363 THSAIDLFAYMIGNGCMPNESTYTILI 389



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 4/243 (1%)

Query: 128 PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           PNV     +++ SF+     V  A+ VL  +   G   +   +N +L A  ++K+     
Sbjct: 170 PNV--VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 227

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            F+   MV  G  P++ + N LL  L  +  ++ A++   ++  KGC P   ++  VI G
Sbjct: 228 AFL-DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 286

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    +  +++ +L EM   G+Q ++  Y+ I   LCRE+++E+AIR F  ++ + + P+
Sbjct: 287 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 346

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            + Y  +I  LC+      A D+   MI  G  P +  +  ++ GL   G   E+ + L+
Sbjct: 347 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 406

Query: 367 DKC 369
           + C
Sbjct: 407 ELC 409



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 42/319 (13%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  +   C   ++  A  L+  M V    PD  TY+  + G C      +AL V  ++
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +  V D ++Y+ L+E  C+     +A+++   M   GC+    ++N+++ G+C   +V
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD----------------------- 565
           D AI       S G    T +Y  ++ GL   +R +D                       
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 566 ------------LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
                        L VL Q+   GC  +  +Y  L+ +  +Q K+     F ++MV  G 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSD--SEVLDSSMYNILINGLWKEGLTSQA 671
            PD  +  +LL  L    ++ +    +++L     + VL S  YN +I+GL K G T +A
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS--YNTVIDGLTKAGKTKEA 296

Query: 672 SYLLDLMLGKGWVPDATTH 690
             LL+ M+ KG  PD  T+
Sbjct: 297 LELLNEMVSKGLQPDIITY 315


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 165/704 (23%), Positives = 295/704 (41%), Gaps = 60/704 (8%)

Query: 43  KSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKM 102
           K HQ            HNL    + R+L +T   + ALK F WV         A++ C+ 
Sbjct: 72  KLHQLLFPTTSPPPPPHNLL--QITRLLGST---AKALKFFNWVQ--------ANSPCQD 118

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNH---YRVNGAMRVL----- 154
              L        +E + ++  +E  PN    L+ L  +  +H     VN A  ++     
Sbjct: 119 SPLLSFT-----LEAVFEHASRE--PNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGR 171

Query: 155 VNMNSGGF---------KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV--KAGIVPNVD 203
             M    F         +    + N+++  +  + R   D + +  EM+  KA   PN +
Sbjct: 172 AQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGR-VDDALHLLDEMLQPKAEFPPNSN 230

Query: 204 TLNYLLEVLFETNRIESALDQ------FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           T + +   L + +++  A+D+        +  +    PNS     +I  L  + R D + 
Sbjct: 231 TGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAW 290

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +L  +  LG  +E +    ++  L R  + +    L   M+ +D+ P+ +T+  LIN L
Sbjct: 291 DVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHL 350

Query: 318 CENLRLDDANDILEDMI---VIGLTPTDDV--FVDIVRGLCEVGKFDESVNFLE-----D 367
           C+  R+D+A ++ E M      G     DV  +  ++ GLC+VG+ +E +  +E      
Sbjct: 351 CKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQP 410

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKA 426
           +C   T  +N L++  C A     A+ + ++M  D    +  + N  +  +C++  I  A
Sbjct: 411 RCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGA 470

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            E    M    +  +  TY+A +   C + N E A+ +F ++       D+I Y  L+ G
Sbjct: 471 VEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISG 530

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           L Q  K+  A  V   M + G S    SFN+LI G C   K+D+A  +     ++G    
Sbjct: 531 LSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPD 590

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++    K         ++ +M+ EG    V  Y  LI +      L +    F 
Sbjct: 591 GVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFR 650

Query: 607 VMVKAGLVPDRETMLSLL-HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
            M     VP    + ++L + L   +Q+ L  S ++ +       +++ +N +  GL ++
Sbjct: 651 DMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEK 710

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRF 707
              S+A  L+D M      PD  T  +L    S+VGE    + F
Sbjct: 711 NWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSF 754



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 227/524 (43%), Gaps = 18/524 (3%)

Query: 105 KLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
           K+G A + EE+ GL     + E +PN    L  L+       R + A  VL  +   G  
Sbjct: 244 KVGRAVDEEEIVGLVSKFAEHEVFPN-SIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGV 302

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           +     N +L A+    R F     +  EM +  I PNV T   L+  L +  R++ AL+
Sbjct: 303 MEAASCNALLTAL-GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALE 361

Query: 224 QFRRMHKKGCC-----PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF-YTC 277
            F +M+          P+  T+  +I GL    R ++ + ++  M      +  +  Y C
Sbjct: 362 VFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNC 421

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C+ + +E A  LF  M    + P+ +T   L++ +C++ R++ A +   +M   G
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           L      +  ++R  C V   ++++   ++      SP    +  L+     AGK   A 
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L KM +   + D  S+N+ I   C   ++ +AYE+L  M  + + PD  TY+  +   
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-CSLS 511
            K  ++  A R+ +++  + LV   ++Y  L+   C    + EA+++F  MS       +
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPN 661

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           +  +NILI  LC   +VD A+ L       G    T+T+  +  GL +         ++ 
Sbjct: 662 TVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMD 721

Query: 572 QMLVEGCALDVEAYCILIQSMS---EQNKLKDCALFFNVMVKAG 612
           +M    C  D     IL + +S   E  KLK     + V   A 
Sbjct: 722 RMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVSASAA 765



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 115/281 (40%), Gaps = 5/281 (1%)

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG 149
           K  +  A TY  +I       N+E+   L   M++           +L+       +++ 
Sbjct: 480 KGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDR 539

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  VL  M   GF   +  FNV++      K    +   + KEM  AGI P+  T N L+
Sbjct: 540 ASFVLSKMKEAGFSPDIVSFNVLINGFCR-KNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-I 268
               +T    +A    ++M K+G  P   T+  +I     N  +D+++ I  +M     +
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
                 Y  +I  LCR+N+++ A+ L   M+   + P+  T+  +   L E   L  A +
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFE 718

Query: 329 ILEDMIVIGLTP---TDDVFVDIVRGLCEVGKFDESVNFLE 366
           +++ M      P   T ++  + +  + E  K    V   E
Sbjct: 719 LMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 218/508 (42%), Gaps = 32/508 (6%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M   G   +V T   L++ L ++  +++A    ++M   GC PN  T+  +I GL    R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
             D++  +  M   G + +L  Y  +I  LC  N++++A  + + +      P+ +TY  
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L+   C   RLD A  ++ +MI+ G      V++D + G CE             +C   
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEA------------RC--- 165

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
               ++  E  C  G         E +   +I D  ++N  I  LC+  ++ K  E+L  
Sbjct: 166 ---QSSRYE--CRDGD--------EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEE 212

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M    + PD  T+ + + G CK    +DA +VF+ +  +  V DS++YS +++ L +  +
Sbjct: 213 MDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANR 272

Query: 493 ITEAVEVFCCMS--KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
           +    EV   M   K GC +   + N  I  LC   K   A  +      SG+     +Y
Sbjct: 273 LDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSY 332

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDC-ALFFNVM 608
             ++ GL K     D   +  +ML  G C  DV  +  LI    +  +L     L   + 
Sbjct: 333 NFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMK 392

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
            K   VPD  T  +L+ G +    L      + ++ +     +   Y  LING  K G+ 
Sbjct: 393 AKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMY 452

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGS 696
            +A  L D M  KG  PD  T+  ++ +
Sbjct: 453 EEAESLFDEMSAKGCFPDIITYNTVLSA 480



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 251/602 (41%), Gaps = 87/602 (14%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M + G+  SV  +  ++  +   K G  D    + ++M  AG  PNV T   L++ L + 
Sbjct: 1   MAANGYDASVVTYTTLIDGLC--KSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKA 58

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            R   A+   +RM + GC P+  T+  +I GL   +R+DD+  +L E+   G       Y
Sbjct: 59  RRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118

Query: 276 TCIIPMLCRENKLEEAIRLFKMM-------------------------------RALDLM 304
           + ++   CR  +L++A  L + M                               R  D M
Sbjct: 119 STLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEM 178

Query: 305 ------PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 PD +TY   I+ LC+  +LD   ++LE+M   G+ P    F  I+ GLC+  + 
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238

Query: 359 DESVN----FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK---IADCDSWN 411
           D++       LE  C   +  ++ +L+    A +      +LE M   K   + +  + N
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSA 470
             I  LC + +   A  +L  M+ S  +P+  +Y+  + G CK  N +DA ++ R+ + +
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM-SKNGCSLSSSSFNILIYGLCVMRKVD 529
                D I ++ L+ G C+  ++++A ++   M +KN               +CV   V 
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKN---------------ICVPDVV- 402

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
                              TY  ++ G  K    K   ++L +M   GC  +V  Y  LI
Sbjct: 403 -------------------TYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALI 443

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
              ++    ++    F+ M   G  PD  T  ++L   +    +        +L + +  
Sbjct: 444 NGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSY 503

Query: 650 L--DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-SVGEEIDSRR 706
              D+  Y ILI+G  +   T Q   LL  M  +GW  D+ T+ +L+   +  EE+ S+ 
Sbjct: 504 CSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKA 563

Query: 707 FA 708
            A
Sbjct: 564 LA 565



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 196/440 (44%), Gaps = 34/440 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM+++G +P+V T N  +  L +  +++  L+    M + G  P+  TF  +I GL   +
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL--MPDELT 309
           R+DD+  +   M + G   +   Y+ ++  L R N+L+    + + M+A+    + +  T
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE----SVNFL 365
           +   I  LC + +   A +IL  MI  G  P    +  ++ GLC+ G  D+    S   L
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356

Query: 366 EDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI--ADCDSWNIPIRWLCE 419
           +  C     P     N L+   C AG+   A  +L +M  + I   D  ++N  I    +
Sbjct: 357 DSGC---CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSK 413

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              +++A  LL  M      P+  TY+A + G  K   YE+A  +F ++SA+    D I+
Sbjct: 414 FGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIIT 473

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNG--CSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           Y+ ++    +   +++A  V+  +      CS  + ++ ILI G C     ++ + L   
Sbjct: 474 YNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQE 533

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQR-AKDLLVVLAQMLVEGCAL---------------- 580
             + G S  + TY  ++  L + +      L V  QML + C                  
Sbjct: 534 MTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTG 593

Query: 581 DVEAYCILIQSMSEQNKLKD 600
           DV +   ++Q M+E+  L D
Sbjct: 594 DVNSARSMVQEMNEKGHLVD 613



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 65/150 (43%), Gaps = 2/150 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS--LVFSFVNHYRVNGAMRVLV 155
           TY  ++     AG + + EG+ Q +  +      +A+    L+  +         + +L 
Sbjct: 473 TYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQ 532

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M + G+      +NV++  + E +   +  + VY++M+    VP+    N L+ +   T
Sbjct: 533 EMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRT 592

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
             + SA    + M++KG   ++   E + K
Sbjct: 593 GDVNSARSMVQEMNEKGHLVDASNLEALNK 622


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 161/723 (22%), Positives = 295/723 (40%), Gaps = 76/723 (10%)

Query: 35  LSSETDMIKSHQT--TDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRF 92
           LS+     KS +T  +D E  +  + H         V D   D    LK+F+W S +  F
Sbjct: 42  LSTHPHWEKSLETRFSDCETPVSGIAH--------FVFDRIRDPGLGLKLFEWASKRSDF 93

Query: 93  QHTADTY-CKMILKLGLAGNV-EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
               D + C  +LKL     V  E+E L + M  +     REAL  +V ++V+   VN A
Sbjct: 94  NDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRA 153

Query: 151 MRVL-VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-------------- 195
           + +  +  +   +   V   N +L A++++K+       VY+EMVK              
Sbjct: 154 LELYHIAYDIHNYLPDVIACNALLNALIQQKK-VEIARKVYEEMVKRDGCWDNYSVCIMV 212

Query: 196 ---------------------AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
                                 G +PN+   N L++  ++   +E A   F+ +  KG  
Sbjct: 213 RGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFL 272

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P + T+ I+I GL           +L EM + G+ + +  Y  I+    +     E  + 
Sbjct: 273 PTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKT 332

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            + +      PD  TY  LI+  C + ++ +A ++LE  I  GL+P    +  ++   C+
Sbjct: 333 LRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCK 392

Query: 355 VGK----FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
            GK    FD  +   E         + AL+     AG+  +A  + +KM +R +  D + 
Sbjct: 393 QGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANV 452

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N+ +  LC+   +  A  LL  M+  ++  D    +  V G  +    ++A ++F    
Sbjct: 453 YNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTI 512

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           A+ +    + Y+ +++G C+   + +A+     M     S    +++ +I G      + 
Sbjct: 513 AKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLH 572

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A++L              TYT ++ G  +   +        +M   G   +V  Y ILI
Sbjct: 573 NALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILI 632

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
               ++ K+     FF +M+    +P+  T   L++GL +    +L ++  NK     E+
Sbjct: 633 GCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTN----NLATAVSNKANESLEI 688

Query: 650 LDSSM---YNILINGLWKEGLTSQASYLL---------------DLMLGKGWVPDATTHG 691
             S M   +  +I+  W++ + +  S L+               D M GKG  PD  +  
Sbjct: 689 KASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFA 748

Query: 692 LLV 694
            LV
Sbjct: 749 ALV 751



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 123/576 (21%), Positives = 239/576 (41%), Gaps = 29/576 (5%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G+VE   GL + +  + +    E    ++              +LV M   G  ++V V+
Sbjct: 254 GDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVY 313

Query: 170 NVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           N ++ A +  K G   +     + + + G  P++ T N L+       ++  A +     
Sbjct: 314 NSIVDAQI--KHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHA 371

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  PN  ++  +I       +   +  +   M + G  L+L  Y  ++  L    ++
Sbjct: 372 IKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEV 431

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           + A+ +   M    ++PD   Y  L+N LC+  RL  A  +L +M+   L+    V   +
Sbjct: 432 DVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATL 491

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           V G    GK DE+    E        P    +NA+++  C  G    A   +++M D   
Sbjct: 492 VDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDH 551

Query: 405 A-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + D  +++  I    +  ++  A +L G+MV     P+  TY++ + G C+  +   A +
Sbjct: 552 SPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEK 611

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            F ++ +  L  + ++Y+ L+   C+  KI++A   F  M  N C  +  +FN LI GL 
Sbjct: 612 TFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLT 671

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
                       +LA +       S   K  L          ++     M+ +G    V 
Sbjct: 672 -----------NNLATAVSNKANESLEIKASL----------MMDFFRTMISDGWEQRVA 710

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           AY  ++  +     +       + M   G+ PD  +  +L++GL    +     + I+  
Sbjct: 711 AYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISCK 770

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
           +++ E+  +  Y+  +N    +GLTS+AS +   +L
Sbjct: 771 LNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLL 806



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 181/451 (40%), Gaps = 36/451 (7%)

Query: 13  KIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHL-----I 67
           K ++W+    C   ++  NT+   S  D  K H+    E    +++  LSP+ L     I
Sbjct: 331 KTLRWITENGCEPDITTYNTLISGSCRDG-KVHEAE--ELLEHAIKRGLSPNKLSYTPLI 387

Query: 68  RVLDNTNDLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKE 125
            V         A  +F  + + ++  H  D   Y  ++  L  AG V+    +   MV+ 
Sbjct: 388 HVYCKQGKCLRAFDLF--IGMTEK-GHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVER 444

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF---NVVLGAIVEEKRG 182
                      L+       R++ A  +LV M      LS+D F    +V G I   K  
Sbjct: 445 GVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQ--NLSLDAFVSATLVDGFIRHGKLD 502

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            A  +F  +  +  G+ P V   N +++   +   +  AL   +RM      P+  T+  
Sbjct: 503 EAKKLF--ELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYST 560

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I G +  + + +++ + G+M     +  +  YT +I   CR      A + F+ MR+  
Sbjct: 561 IIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSG 620

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L P+ +TY  LI C C+  ++  A    E M++    P D  F  ++ GL          
Sbjct: 621 LKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLT--------- 671

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
               +    V++  N  LE   +    F    I +    R  A    +N  +  LC ++ 
Sbjct: 672 ---NNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAA----YNSVLICLCHHKM 724

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  A +L  +M    + PD  +++A V G C
Sbjct: 725 VNAALQLRDKMTGKGIFPDPVSFAALVYGLC 755



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 35/222 (15%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D I+ + L+  L Q +K+  A +V+  M K      + S  I++ GLC  RKV++  +L 
Sbjct: 169 DVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLI 228

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
           +  +                                    +GC  ++  Y  L+    ++
Sbjct: 229 NDRWG-----------------------------------KGCIPNIVFYNTLVDGYWKR 253

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             ++     F  +   G +P  ET   +++GL        V   + ++      ++  +Y
Sbjct: 254 GDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVY 313

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
           N +++   K G   +    L  +   G  PD TT+  L+  S
Sbjct: 314 NSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGS 355


>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
 gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
          Length = 448

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 199/442 (45%), Gaps = 39/442 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLV 155
           D+Y  ++  L    +V++   +   MV E Y P+V    + LV  F    RV     +  
Sbjct: 11  DSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGL-LVDKFCEMKRVGEVCELFQ 69

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM-VKAGIVPNVDTLNYLLEVLFE 214
            + S G  + +  +N +L A++    G  D  F + ++ V  G +P+V     +L+ L +
Sbjct: 70  ELESNGVAVGMLAYNAILKALM--CSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIK 127

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           T +   A +    M KK   P+  T+  +I  L  ++R DD++ +   M +  I   L  
Sbjct: 128 TGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDV 186

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT ++   CR  KL+ A RLF  M      P   TY  L+ CLC   R   A DI   M 
Sbjct: 187 YTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMR 246

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G  P ++ +  ++ G                               CC AG+   AK 
Sbjct: 247 SRGHVPDENTYASLIYG-------------------------------CCMAGRITEAKV 275

Query: 395 ILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
           + +++   ++ + D   +N+ I  LC   ++ +A E+   MV    +P   TY+A ++G 
Sbjct: 276 LFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGF 335

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            K    + AL++FR +  +    +++ YS  ++GLC+V KI EA E F    + GC   +
Sbjct: 336 FKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDN 395

Query: 513 SSFNILIYGLCVMRKVDKAIRL 534
            ++N LI GL    ++D+A RL
Sbjct: 396 VTYNALIRGLFGANRMDEAHRL 417



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 180/430 (41%), Gaps = 40/430 (9%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV  G  P+V T   L++   E  R+    + F+ +   G       +  ++K L+ +  
Sbjct: 36  MVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGD 95

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            D            G    +  Y  ++  L +  K  EA  +   M    + PD +TY  
Sbjct: 96  FDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTA 154

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDK 368
           LI+ LC++ R DDA  + + M+   + P  DV+  ++   C   K D +    V  ++  
Sbjct: 155 LISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRG 214

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            G   S +  LL C CN G+ +LA                                  Y+
Sbjct: 215 YGPSASTYGLLLRCLCNGGRSYLA----------------------------------YD 240

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEGL 487
           +   M     VPD  TY++ + G C      +A  +F++V   +  +LD+  Y+ L+EGL
Sbjct: 241 IHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGL 300

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+ EA+EV   M   GC  +  ++N LI G     +VDKA++L  +    G S  T
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNT 360

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             Y+  + GL K+ +  +      Q +  GC  D   Y  LI+ +   N++ +    +  
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420

Query: 608 MVKAGLVPDR 617
           M + G + DR
Sbjct: 421 MGERGYIADR 430



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/444 (20%), Positives = 189/444 (42%), Gaps = 5/444 (1%)

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M + G+  +   Y  ++  L + + +++A  +   M      PD +T   L++  CE  R
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NA 378
           + +  ++ +++   G+      +  I++ L   G FD    F +   G  + PH      
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +L+C    GK   A  ++ +M  + + D  ++   I  LC++     A ++   MV   +
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEI 180

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           VP+   Y++ +   C+    + A R+F ++  +     + +Y  L+  LC   +   A +
Sbjct: 181 VPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYD 240

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIMLGL 557
           +   M   G     +++  LIYG C+  ++ +A +  + +            Y  ++ GL
Sbjct: 241 IHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGL 300

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            +  + ++ L V A M+ +GC   ++ Y  LI    + N++      F VM + G  P+ 
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNT 360

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
               + + GL    +++       + V    V D+  YN LI GL+      +A  L   
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420

Query: 678 MLGKGWVPDATTHGLLVGSSVGEE 701
           M  +G++ D +   L    S  E+
Sbjct: 421 MGERGYIADRSLRTLAFQRSREEQ 444



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/446 (20%), Positives = 189/446 (42%), Gaps = 40/446 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G+VP+ D+ N L+  L + + ++ A      M  +G  P+  T  +++       R
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V +   +  E+   G+ + +  Y  I+  L      +   +   +      +P  L Y+ 
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +++CL +  +  +A++++ +MI   + P    +  ++  LC+  + D+++          
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMK--------- 170

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
                                 + + M +++I  + D +   +   C   ++  AY L  
Sbjct: 171 ----------------------VFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFV 208

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYED---ALRVFRQVSAQSLVLDSISYSKLVEGLC 488
            M+     P  +TY   +L +C LCN      A  +   + ++  V D  +Y+ L+ G C
Sbjct: 209 EMIQRGYGPSASTYG--LLLRC-LCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCC 265

Query: 489 QVEKITEAVEVFC-CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
              +ITEA  +F   +      L +  +N+LI GLC   KV++A+ + +     G   T 
Sbjct: 266 MAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTL 325

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  +++G  K       L +   M  +G + +   Y   I  + +  K+ +   FF  
Sbjct: 326 QTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQ 385

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQL 633
            V+ G VPD  T  +L+ GL   +++
Sbjct: 386 SVERGCVPDNVTYNALIRGLFGANRM 411



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 94  HTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS-LVFSFVNHYRVNGA 150
           H  D  TY  +I    +AG + E + L + +++     +   + + L+       +V  A
Sbjct: 250 HVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEA 309

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           + V   M   G   ++  +N ++    +        + +++ M + G  PN    +  ++
Sbjct: 310 LEVTAGMVDKGCIPTLQTYNALIMGFFKANE-VDKALQLFRVMEEKGFSPNTMIYSTFID 368

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
            L +  +I  A + F++  ++GC P++ T+  +I+GL   +R+D++  +  EM + G   
Sbjct: 369 GLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIA 428

Query: 271 ELSFYT 276
           + S  T
Sbjct: 429 DRSLRT 434



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 1/157 (0%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           ++ A  +FK V   ++    A  Y  +I  L  A  VEE   +   MV +      +   
Sbjct: 270 ITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYN 329

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F     V+ A+++   M   GF  +  +++  +  + +  +      F +++ V+
Sbjct: 330 ALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEF-FQQSVE 388

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
            G VP+  T N L+  LF  NR++ A   +R M ++G
Sbjct: 389 RGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERG 425


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 212/452 (46%), Gaps = 9/452 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM++ G V +  TL  ++    E + +  A+  F ++ K G  PN   +  +I GL    
Sbjct: 269 EMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG 328

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTY 310
            V  +  +L EM   G +  +  +T +I  LC++   E A RLF K++R+ +  P+  TY
Sbjct: 329 SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 388

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DK 368
             +I+  C+  +L  A  + E M   GL P  + +  ++ G C+ G F ++   +E    
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448

Query: 369 CGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            G+   T  +N++++  C  G+   A  +L      +I AD  ++ I I   C+  ++ +
Sbjct: 449 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 508

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A   L +M      PD   Y+  +   C+    +D+ ++F +V    L     +Y+ ++ 
Sbjct: 509 ALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMIC 568

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           G C+ +K++ AV+ F  MS +GC+  S S+  LI GLC   ++D+A +L       G S 
Sbjct: 569 GYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              T   +     K +     +V+L ++      L +     LI+ +  + K+   ALFF
Sbjct: 629 CEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTVHTLIRKLCCEKKVALAALFF 685

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           + ++   +  DR T+ +      + ++  LVS
Sbjct: 686 HKLLDKEVNVDRVTLAAFNTACIESNKYALVS 717



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 209/463 (45%), Gaps = 9/463 (1%)

Query: 232 GCCPNSRTFEIV--IKGLIAN-SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
           G C   R  E+V  + G+ A   ++ ++V ++ +M + G+ L       II +      +
Sbjct: 166 GKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLV 225

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           E A  +F  M A  + PD  TY+ +I   C N  + +A+  + +M+  G    +     I
Sbjct: 226 EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLI 285

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           +   CE    + +V F         SP    +++++   C  G    A  +LE+M     
Sbjct: 286 ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 345

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYEDAL 462
             +  +    I  LC+     +A+ L  +++ S +  P+  TY+A + G CK      A 
Sbjct: 346 KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 405

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F ++  Q LV ++ +Y+ L++G C+    ++A E+   MS  G   ++ ++N ++ GL
Sbjct: 406 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 465

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   + ++A +L +  + +       TYT ++    K       LV L +M   G   D+
Sbjct: 466 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDI 525

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LI +   QN +KD    F+ ++K GL P +ET  S++ G     ++ L      K
Sbjct: 526 HLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQK 585

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           +       DS  Y  LI+GL KE    +A  L D M+ KG  P
Sbjct: 586 MSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 198/440 (45%), Gaps = 6/440 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   G+V     +N ++ V  E   +E A + F  M  +G  P+S T++ +I G   N 
Sbjct: 199 DMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNG 258

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V ++   + EM + G  ++ +  T II   C ++ +  A+  F  +  + L P+ + Y 
Sbjct: 259 NVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYS 318

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLE---- 366
            +I+ LC+   +  A ++LE+M+  G  P       ++ GLC+ G  + +   FL+    
Sbjct: 319 SMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRS 378

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
           D        + A++   C   K   A+ + E+M ++  + + +++   I   C+     K
Sbjct: 379 DNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSK 438

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AYEL+  M      P+  TY++ V G CK    E+A ++        +  D ++Y+ L+ 
Sbjct: 439 AYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILIS 498

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+   + +A+     M K G       +  LI   C    +  + +L       G + 
Sbjct: 499 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 558

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TYT ++ G  + ++    +    +M   GCA D  +Y  LI  + ++++L +    +
Sbjct: 559 TKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 618

Query: 606 NVMVKAGLVPDRETMLSLLH 625
           + M+  GL P   T ++L +
Sbjct: 619 DTMIDKGLSPCEVTRVTLTY 638



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 154/343 (44%), Gaps = 11/343 (3%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           Y  MI  L   G+V++   L + MVK  + PNV     SL+           A R+ + +
Sbjct: 317 YSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTH-TSLIHGLCKKGWTERAFRLFLKL 375

Query: 158 -NSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
             S  +K +V  +  ++ G   EEK   A+ +F  + M + G+VPN +T   L++   + 
Sbjct: 376 IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF--ERMKEQGLVPNTNTYTTLIDGHCKA 433

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
                A +    M  +G  PN+ T+  ++ GL    R +++  +L   F   I+ +   Y
Sbjct: 434 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 493

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T +I   C+   + +A+     M  +   PD   Y  LI   C    + D+  + +++I 
Sbjct: 494 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIK 553

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
           +GL PT + +  ++ G C   K   +V F +    +  +P    + AL+   C   +   
Sbjct: 554 LGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDE 613

Query: 392 AKCILEKMADRKIADCDSWNIPIRW-LCENEEIRKAYELLGRM 433
           A+ + + M D+ ++ C+   + + +  C+ E+   A  +L R+
Sbjct: 614 ARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 656



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 142/351 (40%), Gaps = 6/351 (1%)

Query: 352 LCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
             E+GK  E+V+ + D    G V  T   N ++           A  + ++M+ R +  D
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++   I   C N  + +A   +  M+    V D AT +  +   C+      A+  F 
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           +V+   L  + I+YS ++ GLC+   + +A E+   M KNG   +  +   LI+GLC   
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363

Query: 527 KVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             ++A RL   L  S        TYT ++ G  K ++     ++  +M  +G   +   Y
Sbjct: 364 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 423

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    +            +M   G  P+  T  S++ GL    +       +N    
Sbjct: 424 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 483

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +    D   Y ILI+   K    +QA   L+ M   G+ PD   +  L+ +
Sbjct: 484 NQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 152/643 (23%), Positives = 267/643 (41%), Gaps = 70/643 (10%)

Query: 46  QTTDYEAKIQSLRHNLS--PDHLI--RVLDNTNDLSS------ALKIFKWVSIQKRFQHT 95
           Q T +   +QS   NLS  PD L   + +     L+S      AL  F W     +F++ 
Sbjct: 81  QQTPHVRLLQSPSINLSVNPDSLTHEQAITVVASLASEAGSMVALSFFNWAIGFPKFRYF 140

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
              Y  ++      GN             E +    E +  +V  F    +   A+ +++
Sbjct: 141 MRFY--IVCATSFIGN-------------ENFERAHEVMDCMVRVFAEIGKFQEAVNMVI 185

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVF--------------------VY---- 190
            M + G  L+V   N V G   E    G+A+ VF                     Y    
Sbjct: 186 EMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMG 245

Query: 191 ---------KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
                    K+MV+ G V +  T   ++    E          F +  + G  PN   F 
Sbjct: 246 RISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFT 305

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRA 300
            +I GL     +  +  +L EM   G +  +  +T +I  LC++   E+A RLF K++R+
Sbjct: 306 SLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 365

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
            D  P+  TY  +I+  C+  +L+ A  +L  M   GL P    +  ++ G  + G F++
Sbjct: 366 DDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEK 425

Query: 361 SVNFLE--DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPI 414
           +   ++   K G+  +   +NA ++  C  G+F L  C L K   R    AD  ++ I I
Sbjct: 426 AYELMDLMGKEGFSANIFTYNAFIDSLCKKGRF-LEACKLLKKGFRLGLQADTVTYTILI 484

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC   + R+A     +M  + V PD  TY+  +    +    E++ ++F +     LV
Sbjct: 485 SELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLV 544

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
               +Y+ ++ G C+   ++ A++ F  MS +GC+  S ++  LI GLC   K+D+A +L
Sbjct: 545 PTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQL 604

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                  G S    T   +     K   +   +V+L ++  +   L +     LI+ +  
Sbjct: 605 YEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKK---LWIRTVNTLIRKLCS 661

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           + K+    LFF+ ++      DR T+ +      + ++  LVS
Sbjct: 662 ERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYALVS 704



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 195/441 (44%), Gaps = 8/441 (1%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +  ++V+++ EM + G+ L +    C+  +      +  A  +F  MR   + PD ++Y+
Sbjct: 176 KFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYK 235

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +    C   R+ D +  L+DM+  G    +     ++   CE G F   V +  DK   
Sbjct: 236 LMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKG-FASRVFWYFDKWVE 294

Query: 372 VTSPHN-----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           +    N     +L+   C  G    A  +LE+M  +    +  +    I  LC+     K
Sbjct: 295 LGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEK 354

Query: 426 AYELLGRMVVSS-VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           A+ L  ++V S    P+  TY++ + G CK      A  +  ++  Q LV ++ +Y+ L+
Sbjct: 355 AFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLI 414

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +G  +     +A E+   M K G S +  ++N  I  LC   +  +A +L    +  G  
Sbjct: 415 DGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQ 474

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             T TYT ++  L +    ++ LV  ++M   G   D+  Y  LI + S Q ++++    
Sbjct: 475 ADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKL 534

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F   V  GLVP +ET  S++ G      + L     N++       DS  Y  LI+GL K
Sbjct: 535 FAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCK 594

Query: 665 EGLTSQASYLLDLMLGKGWVP 685
           E    +A  L + M+ KG  P
Sbjct: 595 ESKLDEACQLYEAMVDKGLSP 615



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 140/355 (39%), Gaps = 6/355 (1%)

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN-AGKFFL---AKCILEKMADRK 403
           +VR   E+GKF E+VN + +   +        L C    AG+  L   A+ + ++M  R 
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  D  S+ +     C    I      L  MV    V D AT +  +   C+        
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             F +     L  + I+++ L+ GLC+   I +A E+   M K G   +  +   LI GL
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 523 CVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           C     +KA RL   L  S        TYT ++ G  K  +     ++L++M  +G   +
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
            + Y  LI   S+    +      ++M K G   +  T  + +  L    +       + 
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           K        D+  Y ILI+ L +   T +A      M   G  PD  T+  L+ +
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAA 521



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 33/214 (15%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+     M   G +  +  +N ++ A   ++R   +   ++ E V  G+VP  +T   ++
Sbjct: 496 ALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRR-MEESEKLFAEAVGLGLVPTKETYTSMI 554

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI- 268
                   +  AL  F RM   GC P+S T+  +I GL   S++D++  +   M D G+ 
Sbjct: 555 CGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLS 614

Query: 269 -----QLELSFYTC--------------------------IIPMLCRENKLEEAIRLFKM 297
                +L L++  C                          +I  LC E K+  A+  F  
Sbjct: 615 PCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGMAVLFFHK 674

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +   D   D +T         E+ +    +D+ E
Sbjct: 675 LLDKDQNVDRVTLTAFTTACYESNKYALVSDLSE 708


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 232/538 (43%), Gaps = 50/538 (9%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N+++    + +       F+ +EM + G  P     + +++   +T  +  A+D F  M
Sbjct: 47  YNIIIDGYCKARNIEKALAFL-REMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM 105

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             KGC P+   F +++ GL    ++ ++  +   M   G + ++  Y  +I  LC+  KL
Sbjct: 106 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKL 165

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +EA+ L + M+  D+ P  +TY  LI+ LC+  RL  A ++ E M       T+  +  +
Sbjct: 166 DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVL 225

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
              L   GK  E+     D C             C     + L    L KM        D
Sbjct: 226 FNKLQRAGKLVEASRVYSDMCRK---------NVCMTDNTYSLVVLGLSKM--------D 268

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
             N+            +A +L+  M+   + PD   YS  + G CK     +A  +F+++
Sbjct: 269 GGNV------------EAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEM 316

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + +    ++Y+ L+EGL    K+ +A+E+   M   G    + S+N++I G C     
Sbjct: 317 RGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDT 376

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV----EGCALDVEA 584
           ++A  L       G    T TY  +++G +K +      ++  +M      +  A ++  
Sbjct: 377 NEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFT 436

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA------DGSQLHLVSS 638
           Y ILI S+ + +++++     + M   G VP  +    LL  LA      D  +L+   S
Sbjct: 437 YEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMS 496

Query: 639 GIN--KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            IN  +LV  S        NIL++G+ + G   +A   L  M   G VPD  T+  LV
Sbjct: 497 RINCQQLVGSS--------NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLV 546



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 134/578 (23%), Positives = 254/578 (43%), Gaps = 12/578 (2%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  +I  L  AG + E E   + M +   PNV    I ++  +     +  A+  L  M 
Sbjct: 13  YNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNI-IIDGYCKARNIEKALAFLREME 71

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
             G   +   ++ ++ +  +     +  + V+ EM   G  P++   N LL  L+   +I
Sbjct: 72  ELGHPPTPHAYSSIVQSFCKTG-NVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 130

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
             A + FR M+ +GC P+  T+  +I GL    ++D++V +L  M    +      YT +
Sbjct: 131 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 190

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+  +L++A  +F+ M        E  Y  L N L    +L +A+ +  DM    +
Sbjct: 191 IDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNV 250

Query: 339 TPTDDVFVDIVRGLCEV-GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             TD+ +  +V GL ++ G   E+   + +  G   +P    ++ L+   C A +   AK
Sbjct: 251 CMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAK 310

Query: 394 CILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + ++M  R I+    ++N  +  L    +++ A EL   M+    +PD  +Y+  + G 
Sbjct: 311 EMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGF 370

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS--KNGCSL 510
           C   +  +A  +F+ +    +VL++ +Y+ ++ G  + E  + A  +F  M   KN    
Sbjct: 371 CANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVP 430

Query: 511 SSSSFN--ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           + + F   ILI  LC   +V++A +L S     G   +   +  ++  L +  R  D   
Sbjct: 431 APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFE 490

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +  +M    C   V +  IL+  +  +  + +   F   M   G+VPD+ T   L+ GL 
Sbjct: 491 LYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC 550

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
              +       + +LV D +  ++     L+  L  +G
Sbjct: 551 WQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQG 588



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 158/351 (45%), Gaps = 8/351 (2%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           +N L+ C C AG    A+  L++M      +  S+NI I   C+   I KA   L  M  
Sbjct: 13  YNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEE 72

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               P    YS+ V   CK  N   A+ VF ++ A+    D ++++ L+ GL +  KI E
Sbjct: 73  LGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHE 132

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E+F  M+  GC     ++N +I GLC  +K+D+A+ L         S T  TYT ++ 
Sbjct: 133 ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLID 192

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            L K  R +    V  +M    CA    AY +L   +    KL + +  ++ M +  +  
Sbjct: 193 HLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCM 252

Query: 616 DRETMLSLLHGLA--DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
              T   ++ GL+  DG  +   +  + +++      D   Y+ILINGL K     +A  
Sbjct: 253 TDNTYSLVVLGLSKMDGGNVE-AAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKE 311

Query: 674 LLDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           +   M G+G  P   T+     GLL  + + + ++   F  D    PD+ S
Sbjct: 312 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCS 362



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 191/405 (47%), Gaps = 7/405 (1%)

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L P+ + Y  LI+CLC+   L +A   L+ M      P    +  I+ G C+    ++++
Sbjct: 6   LFPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKAL 64

Query: 363 NFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
            FL   ++ G+  +PH  +++++  C  G    A  +  +M  +    D  ++N+ +  L
Sbjct: 65  AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL 124

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
               +I +A EL   M      PD  TY+  + G CK    ++A+ +  ++  + +    
Sbjct: 125 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF 184

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L++ LC+  ++ +A EVF  M++  C+ +  ++++L   L    K+ +A R+ S 
Sbjct: 185 VTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSD 244

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAK-DLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                   T +TY+ ++LGL K+     +   ++ +M+ +  A D  AY ILI  + +  
Sbjct: 245 MCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKAR 304

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +  +    F  M   G+ P   T  +LL GL   ++L         ++    + D+  YN
Sbjct: 305 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYN 364

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           ++I G    G T++A  L   M+  G V +  T+  ++   + +E
Sbjct: 365 LMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDE 409



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 122/567 (21%), Positives = 225/567 (39%), Gaps = 63/567 (11%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK       A N+E+     + M +  +P    A  S+V SF     V+ AM V   
Sbjct: 52  DGYCK-------ARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAE 104

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M + G +  +  FNV+L  +    R   +   +++ M   G  P+V T N ++  L +  
Sbjct: 105 MPAKGCEPDIVNFNVLLSGLWR-ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWK 163

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A+    RM ++   P   T+  +I  L   +R+  +  +  +M +         Y+
Sbjct: 164 KLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYS 223

Query: 277 CIIPMLCRENKLEEAIRLF-----------------------KM-------------MRA 300
            +   L R  KL EA R++                       KM             M  
Sbjct: 224 VLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMG 283

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             + PD   Y  LIN LC+  R  +A ++ ++M   G++PT   +  ++ GL    K  +
Sbjct: 284 KKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQD 343

Query: 361 SVNF---------LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSW 410
           ++           L D C Y     N ++   C  G    A C+ + M  D  + +  ++
Sbjct: 344 AMELTYFMLDQGRLPDTCSY-----NLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTY 398

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSS----VVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           N  I    ++E    A+ L  RM          P+  TY   +   CK    E+A ++  
Sbjct: 399 NFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLS 458

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +  +  V     +  L+  L +  ++ +A E++  MS+  C     S NIL+ G+    
Sbjct: 459 AMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRG 518

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            VD+A         +G      TY K+++GL    +A     ++ +++ +G   + +   
Sbjct: 519 SVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLR 578

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGL 613
            L+ ++  Q   +    F+  +   G+
Sbjct: 579 QLLGALCAQGDFQGAYEFYCWLPSVGV 605



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 19/266 (7%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN-VVLGAIVEEKRGFADFVFVYKEMVK 195
           ++  F  +   N A  +  +M   G  L+   +N +++G I +E    A  +F   +  K
Sbjct: 366 MIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGK 425

Query: 196 AGIVPNVDTLNY--LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
              VP  +   Y  L+  L +T+++E A      M  KG  P+ + +E+++  L    R+
Sbjct: 426 NDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRL 485

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           DD+  +  EM  +  Q  +     ++  + R   ++EA    K M    ++PD+ TY++L
Sbjct: 486 DDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 545

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           +  LC   + D A  ++E+++  G  P +     ++  LC  G F  +  F      Y  
Sbjct: 546 VVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEF------YCW 599

Query: 374 SP----------HNALLECCCNAGKF 389
            P          HN L+  CC A K 
Sbjct: 600 LPSVGVEVTLGMHNTLVTSCCLARKL 625



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/423 (19%), Positives = 159/423 (37%), Gaps = 77/423 (18%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A RV  +M      ++ + +++V+  + +   G  +   +  EM+   I P+    + L+
Sbjct: 238 ASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILI 297

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
             L +  R   A + F+ M  +G  P   T+  +++GL++ +++ D++ +   M D G  
Sbjct: 298 NGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRL 357

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMM---------RALDLM---------------- 304
            +   Y  +I   C      EA  LF+ M            + M                
Sbjct: 358 PDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWML 417

Query: 305 --------------PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
                         P+  TYE LI+ LC+  ++++A  +L  M   G  P+  ++  ++ 
Sbjct: 418 FKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLS 477

Query: 351 GLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
            L   G+ D++    ++     C  +    N LL+     G    AK  L++M D     
Sbjct: 478 RLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTD----- 532

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
                                        + +VPD  TY   V+G C     + A ++  
Sbjct: 533 -----------------------------TGIVPDKFTYDKLVVGLCWQGKADQARKLVE 563

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++       ++    +L+  LC       A E +C +   G  ++    N L+   C+ R
Sbjct: 564 ELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLAR 623

Query: 527 KVD 529
           K+D
Sbjct: 624 KLD 626


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 131/581 (22%), Positives = 249/581 (42%), Gaps = 67/581 (11%)

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVF 188
           L +L+ S     R   A+R L   ++ G    V  +N ++        VE  R  A  V 
Sbjct: 55  LSALIRSLCVAGRTADAVRAL---DAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V          PN  T   ++  L    RI  AL     M  + C P    + ++I+   
Sbjct: 112 V---------PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESAC 162

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            +     ++ +L  +   G  L+      +I  +C +  ++E + + + +       D +
Sbjct: 163 RSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIV 222

Query: 309 TYEELINCLCENLRLDDANDILEDMIVI----------GLTPTDDVFVDIVRGLCEVGKF 358
           +Y  ++  LC   R  D  +++++M+ +          G TP   ++  I+ G+C+ G  
Sbjct: 223 SYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHH 282

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           + +   L     Y   P    +N +L+  C+A ++  A+ +L +M  +    D  ++NI 
Sbjct: 283 EVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNIL 342

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           + + C+N  + +  ELL +M+    +PD  TY+  + G CK    ++A+ + + + +   
Sbjct: 343 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGC 402

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             ++ISY+ +++GLC  E+  +A E+   M + GC  +  +FN +I  LC    V++AI 
Sbjct: 403 KPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIE 462

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L                                   L QMLV GC  D+ +Y  +I  + 
Sbjct: 463 L-----------------------------------LKQMLVNGCNPDLISYSTVIDGLG 487

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           +  K ++     NVM+  G+ P+  T  S+   LA   ++  V    + +   +   D+ 
Sbjct: 488 KAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAV 547

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +YN +I+ L K   T  A   L  M+  G +P+ +T+  L+
Sbjct: 548 LYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALI 588



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 180/409 (44%), Gaps = 46/409 (11%)

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           ++GLC     +R+ +V E +  +V       +V+ A   L  M   G    + ++  ++ 
Sbjct: 228 LKGLC---AAKRWGDVEELMDEMV-------KVHEA---LSQMAQHGCTPDIRMYATIID 274

Query: 175 AIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            I +E  G  +    +   M   G+ PNV   N +L+ +   +R E A +    M++K C
Sbjct: 275 GICKE--GHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNC 332

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
             +  TF I++     N  VD  + +L +M + G   ++  YT +I   C+E  ++EA+ 
Sbjct: 333 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 392

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L K M +    P+ ++Y  ++  LC   R  DA +++  MI  G  P    F  I+  LC
Sbjct: 393 LLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLC 452

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
           + G  ++++  L+            +L   CN                    D  S++  
Sbjct: 453 KKGLVEQAIELLKQ-----------MLVNGCN-------------------PDLISYSTV 482

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  L +  +  +A ELL  M+   + P+  TYS+      +    +  +++F  +   ++
Sbjct: 483 IDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATI 542

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
             D++ Y+ ++  LC+  +   A++    M  NGC  + S++  LI GL
Sbjct: 543 RSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGL 591



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/480 (22%), Positives = 206/480 (42%), Gaps = 20/480 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
            +V       R+  A+ VL  M S        +++V++ +      G++  + V + +  
Sbjct: 121 PVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSG-GYSSALRVLEALHA 179

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G   +    N ++  + +   ++  L+  R++   GC  +  ++  V+KGL A  R  D
Sbjct: 180 KGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGD 239

Query: 256 SVSILGEMFDL----------GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
              ++ EM  +          G   ++  Y  II  +C+E   E A  +   M +  L P
Sbjct: 240 VEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKP 299

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI-VRGLCEVGKFDESVNF 364
           + + Y  ++  +C   R + A ++L +M      P DDV  +I V   C+ G  D  +  
Sbjct: 300 NVVCYNTVLKGICSADRWEKAEELLTEMYQKN-CPLDDVTFNILVDFFCQNGLVDRVIEL 358

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           LE    +   P    +  ++   C  G    A  +L+ M       +  S+ I ++ LC 
Sbjct: 359 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCS 418

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            E    A EL+ RM+    +P+  T++  +   CK    E A+ + +Q+       D IS
Sbjct: 419 TERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLIS 478

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS +++GL +  K  EA+E+   M   G + +  +++ + + L    ++DK I++     
Sbjct: 479 YSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQ 538

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLV-VLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            +        Y  ++  L K +R  DL +  LA M+  GC  +   Y  LI+ ++ +  L
Sbjct: 539 DATIRSDAVLYNAVISSLCK-RRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLL 597



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 13/264 (4%)

Query: 118 LCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
            CQN + +R   + E ++            +++  F     ++ A+ +L NM S G K +
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
              + +VL  +   +R + D   +   M++ G +PN  T N ++  L +   +E A++  
Sbjct: 406 TISYTIVLKGLCSTER-WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELL 464

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M   GC P+  ++  VI GL    + ++++ +L  M + GI   +  Y+ +   L RE
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALARE 524

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++++ I++F  ++   +  D + Y  +I+ LC+    D A D L  M+  G  P +  +
Sbjct: 525 GRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTY 584

Query: 346 VDIVRGLCEVGKFDESVNFLEDKC 369
             +++GL   G   E+ + L + C
Sbjct: 585 TALIKGLASEGLLCEAQDLLSELC 608


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 215/510 (42%), Gaps = 5/510 (0%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y +MV     P V   N L  ++ +     +A+   + M   G  PN  T  IVI  L  
Sbjct: 14  YHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCR 73

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            +      S+LG MF +G++  +  +T I+  LC E  + +AIR    ++ +    D  T
Sbjct: 74  LNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYT 133

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
              +IN LC+      A   L+ M           +  +V GLC+ G   E+++      
Sbjct: 134 RGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMT 193

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
           G    P    +N L+   CN  ++  A  +L  M  + I  D  ++N+      +   I 
Sbjct: 194 GKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMIS 253

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  +   M    +  +  TY++ +   C L   +DA+ VF  +  +  + + ++Y+ L+
Sbjct: 254 RAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLI 313

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G C+ + + +A+     M  NG      +++ LI G C   K   A  L  + +  G  
Sbjct: 314 HGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQL 373

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               T   I+ GL K     + + +  ++      LD+  Y I++  M    KL D    
Sbjct: 374 PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALEL 433

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ +   G+  D  T   +++GL     L      + K+  +    D   YN+ + GL +
Sbjct: 434 FSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLR 493

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               S+++  L  M GKG+  +ATT  LL+
Sbjct: 494 RYEISKSTKYLMFMKGKGFRANATTTKLLI 523



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 222/486 (45%), Gaps = 13/486 (2%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR-VDDSVSILGEMFDLGIQLELSFYT 276
           ++ ALD + +M      P  + F ++  G++A  +    ++S++  M  +G++  +S + 
Sbjct: 7   VDVALDFYHKMVTMKPFPCVKDFNLLF-GIVAKMKHYTTAISLIKHMSYIGVKPNVSTHN 65

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LCR N       +  +M  + + P  +T+  ++N LC    +  A   ++ +  +
Sbjct: 66  IVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDM 125

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLA 392
           G          I+ GLC+VG    ++++L    E  C    + ++A+++  C  G  F A
Sbjct: 126 GYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEA 185

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +  +M  + I  +  ++N  I  LC  +  ++A  LL  M+   ++PD  T++     
Sbjct: 186 LDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGR 245

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K      A  +F  +    +  + ++Y+ ++   C + ++ +A+EVF  M + GC  +
Sbjct: 246 FLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPN 305

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDLLV 568
             ++N LI+G C  + ++KA+       ++G      T++ ++ G  K  +   AK+L  
Sbjct: 306 IVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFF 365

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           V+ +    G   D++   I++  + + +   +    F  + K     D      +L+G+ 
Sbjct: 366 VMHK---HGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMC 422

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              +L+      + L S    +D   YNI+INGL KEGL   A  LL  M   G  PD  
Sbjct: 423 SSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDEC 482

Query: 689 THGLLV 694
           T+ + V
Sbjct: 483 TYNVFV 488



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 205/500 (41%), Gaps = 59/500 (11%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN++ G IV + + +   + + K M   G+ PNV T N ++  L   N           M
Sbjct: 29  FNLLFG-IVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLM 87

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ------------------- 269
            K G  P+  TF  ++ GL     V  ++  +  + D+G +                   
Sbjct: 88  FKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHS 147

Query: 270 ----------------LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
                           L+++ Y+ ++  LC++  + EA+ LF  M    + P+  TY  L
Sbjct: 148 SAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCL 207

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           I+ LC   R  +A  +L +M+  G+ P    F  I     + G    + +      G++ 
Sbjct: 208 IHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFM-GHMG 266

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMAD---------RK--IADCDSWNIPIRWLCENEE 422
             HN +            A C+L +M D         RK  + +  ++N  I   CE + 
Sbjct: 267 IEHNVV-----TYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKN 321

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + KA   LG MV + + PD  T+S  + G CK      A  +F  +     + D  + + 
Sbjct: 322 MNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAI 381

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +++GL +    +EA+ +F  + K    L    ++I++ G+C   K++ A+ L S   S G
Sbjct: 382 ILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKG 441

Query: 543 TSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                 TY  ++ GL K   L  A+DLL+   +M   GC  D   Y + +Q +  + ++ 
Sbjct: 442 VKIDVVTYNIMINGLCKEGLLDDAEDLLM---KMEENGCPPDECTYNVFVQGLLRRYEIS 498

Query: 600 DCALFFNVMVKAGLVPDRET 619
               +   M   G   +  T
Sbjct: 499 KSTKYLMFMKGKGFRANATT 518



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 204/480 (42%), Gaps = 36/480 (7%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           T+  ++  L + GNV +      ++    Y + R    +++         + A+  L  M
Sbjct: 98  TFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKM 157

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
                 L V  ++ V+  + ++   F + + ++ +M   GI PN+ T N L+  L   +R
Sbjct: 158 EEQNCNLDVTAYSAVVDGLCKDGMVF-EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDR 216

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            + A      M +KG  P+ +TF ++    +    +  + SI   M  +GI+  +  Y  
Sbjct: 217 WKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNS 276

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II   C  N++++A+ +F +M     +P+ +TY  LI+  CE   ++ A   L +M+  G
Sbjct: 277 IIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNG 336

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           L P      D+V     +G F                         C AGK   AK +  
Sbjct: 337 LDP------DVVTWSTLIGGF-------------------------CKAGKPVAAKELFF 365

Query: 398 KMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            M    ++ D  +  I +  L +     +A  L   +   +   D   YS  + G C   
Sbjct: 366 VMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSG 425

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              DAL +F  +S++ + +D ++Y+ ++ GLC+   + +A ++   M +NGC     ++N
Sbjct: 426 KLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYN 485

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSY-TTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + + GL  +R+ + +   + L +  G  +   +T TK+++      +      V  Q  V
Sbjct: 486 VFVQGL--LRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQVFLQKFV 543



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 145/363 (39%), Gaps = 48/363 (13%)

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
           S HN ++ C C          +L  M    +     ++   +  LC    + +A   +  
Sbjct: 62  STHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDH 121

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +       D  T  A + G CK+ +   AL   +++  Q+  LD  +YS +V+GLC+   
Sbjct: 122 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGM 181

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA+++F  M+  G   +  ++N LI+GLC   +  +A  L +     G      T+  
Sbjct: 182 VFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNV 241

Query: 553 IMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           I    +K   + RAK +   +  M +E    +V  Y  +I +    N++KD    F++M+
Sbjct: 242 IAGRFLKTGMISRAKSIFSFMGHMGIEH---NVVTYNSIIGAHCMLNQMKDAMEVFDLMI 298

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           + G +P+  T  SL+HG  +   +                                   +
Sbjct: 299 RKGCLPNIVTYNSLIHGWCETKNM-----------------------------------N 323

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAF---DSSSFPD-SVSDILA 723
           +A Y L  M+  G  PD  T   L+G     G+ + ++   F        PD     I+ 
Sbjct: 324 KAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIIL 383

Query: 724 EGL 726
           +GL
Sbjct: 384 DGL 386



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 4/273 (1%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A +   +MV     P    ++       K+ +Y  A+ + + +S   +  +  +++ ++ 
Sbjct: 10  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVIN 69

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC++        V   M K G   S  +F  ++ GLCV   V +AIR   + +     Y
Sbjct: 70  CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRF--VDHLKDMGY 127

Query: 546 TTSTYTK--IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
            +  YT+  I+ GL K+  +   L  L +M  + C LDV AY  ++  + +   + +   
Sbjct: 128 ESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALD 187

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F+ M   G+ P+  T   L+HGL +  +    +  +  ++    + D   +N++     
Sbjct: 188 LFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFL 247

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           K G+ S+A  +   M   G   +  T+  ++G+
Sbjct: 248 KTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGA 280


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 204/439 (46%), Gaps = 9/439 (2%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD+V  L  + +L +         I+  L RE   E A RLF+ + A    P+  T+  
Sbjct: 144 LDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNI 199

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +I+ LC+   L +A  +L  M  IG +P    +  ++ G  + G+ +E    + +  G  
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    +NAL+ C C  G+   A     +M    + A+  +++  +   C+N  +R+A 
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L  +M +  + P+  TY+  V G CK    +DAL +  ++  Q + L+ ++Y+ LV+GL
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGL 379

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+ EA +VF  M + G   +   +  LI+G  V +  ++A+ L S     G     
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDV 439

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
           S Y  ++ GL  LQ+  +   +L +M   G   +   Y  ++ +  +  K  +       
Sbjct: 440 SLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQK 499

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M+ +G  P+  T  +L+ GL     +    S  NK+V      +   Y  L++GL K G 
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559

Query: 668 TSQASYLLDLMLGKGWVPD 686
             +A  LLD M+ KG   D
Sbjct: 560 LDKAVLLLDEMIDKGMSLD 578



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 205/460 (44%), Gaps = 12/460 (2%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V  FN+++  + +E    A+   +   M   G  P+V T N L++   +   +E     
Sbjct: 193 NVFTFNIMIDFLCKEG-DLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M   GC P+  T+  ++       R++ + S   EM   G+   +  ++  +   C+
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
              + EA++LF  MR   + P+E+TY  L++  C+  RLDDA  +  +M+  G+      
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 345 FVDIVRGLCEVGKFDES--VNFLEDKCGYVTSPHNALLECCCNAGKFFL-----AKCILE 397
           +  +V GLC+ GK  E+  V  L ++ G      N LL      G F       A  +L 
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRA---NELLYTTLIHGHFVYKNSERALSLLS 428

Query: 398 KMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M D+ +  D   +   I  LC  +++ +A  LL +M    + P+   Y+  +    K  
Sbjct: 429 EMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKAR 488

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              +A+ + +++       + ++Y  LV+GLC+   I EA+  F  M   G   +  ++ 
Sbjct: 489 KESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYT 548

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            L+ GLC   ++DKA+ L       G S      T +M G +K    +D   + A+M+  
Sbjct: 549 ALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINS 608

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           G  LD+  Y   +      N +++     + M++ G+ PD
Sbjct: 609 GLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPD 648



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 202/463 (43%), Gaps = 43/463 (9%)

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           +++  M   G +  V  +N ++    +  R    + + + EM + G++ NV T +  ++ 
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSY-FAEMKREGVMANVVTFSTFVDA 308

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +   +  A+  F +M  KG  PN  T+  ++ G     R+DD++ +  EM   G+ L 
Sbjct: 309 FCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN 368

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  YT ++  LC+E K+ EA  +F++M    +  +EL Y  LI+        + A  +L 
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS 428

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNA----LLECCCN 385
           +M   G+     ++  ++ GLC + K DE+ + L   D+CG    P+N     +++ C  
Sbjct: 429 EMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGL--KPNNVIYTNIMDACFK 486

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           A K   A  +L+KM D                                  S   P+  TY
Sbjct: 487 ARKESEAIALLQKMMD----------------------------------SGFRPNIVTY 512

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
            A V G CK  + ++A+  F ++    L  +  +Y+ LV+GLC+  ++ +AV +   M  
Sbjct: 513 CALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMID 572

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G SL +     L+ G      +  A  L++   +SG       YT  + G   L   ++
Sbjct: 573 KGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQE 632

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
              VL++M+  G   D   Y  LI    +   +++ A+  N M
Sbjct: 633 AREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 167/385 (43%), Gaps = 33/385 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           + V +F  +  V  AM++   M   G K +   +  ++    +  R   D + +  EMV+
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGR-LDDALVLTNEMVQ 362

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+  NV T   L++ L +  ++  A D FR M + G   N   +  +I G       + 
Sbjct: 363 QGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSER 422

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++S+L EM D G++L++S Y  +I  LC   KL+EA  L   M    L P+ + Y  +++
Sbjct: 423 ALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMD 482

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
              +  +  +A  +L+ M+  G  P    +  +V GLC+ G  DE+++            
Sbjct: 483 ACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISH----------- 531

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                                 KM D  +  +  ++   +  LC+N  + KA  LL  M+
Sbjct: 532 --------------------FNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMI 571

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  D    ++ + G  K  N +DA  +  ++    L LD   Y+  V G C +  I 
Sbjct: 572 DKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQ 631

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILI 519
           EA EV   M +NG +  +  +N LI
Sbjct: 632 EAREVLSEMIENGITPDAVVYNCLI 656


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 227/515 (44%), Gaps = 8/515 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + +++K G+  +   ++ LL  L E  R   ALD    RM   GC P+  ++ IV+K L 
Sbjct: 131 FGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLC 190

Query: 249 ANSRVDDSVSILGEMFDLGIQL--ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           ++ +   +  +L  M + G         Y  +I    +E  + +A  LF  M    + PD
Sbjct: 191 SDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPD 250

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY  ++N LC+   +D A  IL  M+  G+ P +  +  ++ G    G++ E+V   +
Sbjct: 251 LSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSK 310

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
                   P     N+L+   C  GK   A+ + + MA + +  D  S+ I +       
Sbjct: 311 KMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKG 370

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    EL   M+   + PD   ++  +    K    + A  +F ++  Q +  D ++YS
Sbjct: 371 CLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +AVE F  M   G + S S+++ LI G C    + KA  L     + 
Sbjct: 431 TVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNK 490

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       +  I+  L KL R  D   +    +  G   +V  Y  L+       K+++ 
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+VMV AG+ P+     +L++G     ++    S   +++       +++YNI+++G
Sbjct: 551 LRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHG 610

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           L++ G T  A      M   G   D  T+ +++G 
Sbjct: 611 LFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 246/544 (45%), Gaps = 12/544 (2%)

Query: 167 DVFN--VVLGAIVEEKR-GFADFVFVYKEMVKAGIV--PNVDTLNYLLEVLFETNRIESA 221
           DVF+  +VL ++  +++ G AD +   + M + G V  PN    N +++  F+   +  A
Sbjct: 178 DVFSYCIVLKSLCSDRKSGQADELL--RMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKA 235

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            D F  M ++G  P+  T+  V+  L     +D + +IL +M D G+  +   Y  +I  
Sbjct: 236 CDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYG 295

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
                + +EA+R+ K M +  ++PD +T   L+  LC++ ++ DA D+ + M + G    
Sbjct: 296 YSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTD 355

Query: 342 DDVFVDIVRGLCEVG---KFDESVNF-LEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
              +  ++ G    G      E  N  L D     +   N L++     G    A  I  
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M ++ +  D  +++  I  LC   ++  A E   +M+   V P  +TY   + G C   
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           +   A  +  Q+  + +  D   ++ ++  LC++ ++ +A  +F      G   +   +N
Sbjct: 476 DLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYN 535

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            L+ G C++ K++ A+R+  +  S+G       Y  ++ G  K+ R  + L +  ++L +
Sbjct: 536 TLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G       Y I++  + +  +     + F+ M ++G+  DR T   +L GL   S     
Sbjct: 596 GIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEA 655

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                +L + +  +D +  NI+I G+++     +A  L   +   G VP   T+ +++ +
Sbjct: 656 ILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTN 715

Query: 697 SVGE 700
            + E
Sbjct: 716 LIKE 719



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 117/544 (21%), Positives = 220/544 (40%), Gaps = 9/544 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G  +   + + +L  + E KR       +   M   G VP+V +   +L+ L  ++R   
Sbjct: 138 GLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLC-SDRKSG 196

Query: 221 ALDQFRRMHKKG---CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
             D+  RM  +G   C PN+  +  VI G      V+ +  +  EM   GI  +LS Y C
Sbjct: 197 QADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNC 256

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  LC+   +++A  + + M    ++PD  TY  LI       +  +A  + + M   G
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTS--PHNALLECCCNAGKFF-LA 392
           + P       ++  LC+ GK  ++ +  +     G  T    +  +L      G    L 
Sbjct: 317 ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLT 376

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
           +     ++D    D   +N+ I+   +   + +A  +   M    V PD  TYS  +   
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C++   +DA+  F Q+  Q +     +Y  L++G C    + +A ++   M   G     
Sbjct: 437 CRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             FN +I  LC + +V  A  +     S G       Y  +M G   + + ++ L V   
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+  G   +V  Y  L+    +  ++ +    F  ++  G+ P       +LHGL    +
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                   +++      +D   Y+I++ GL+K   + +A  L   +       D TT  +
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676

Query: 693 LVGS 696
           ++  
Sbjct: 677 MIAG 680



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/486 (21%), Positives = 220/486 (45%), Gaps = 6/486 (1%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V K+M   GI+P+V TLN L+  L +  +I+ A D F  M  KG   +  +++I++ G
Sbjct: 306 VRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNG 365

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 + D   +   M   GI  +   +  +I    +   L+ A  +F  MR   + PD
Sbjct: 366 YATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPD 425

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +I  LC   ++DDA +    MI  G+ P+   +  +++G C  G   ++ + + 
Sbjct: 426 VVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVL 485

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
                   P     N ++   C  G+   A+ I +      +  +   +N  +   C   
Sbjct: 486 QMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVG 545

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++  A  +   MV + + P+   Y   V G CK+   ++ L +FR++  + +   +  Y+
Sbjct: 546 KMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYN 605

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++ GL Q  +   A   F  M+++G ++   +++I++ GL      D+AI L    ++ 
Sbjct: 606 IILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAM 665

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
                 +T   ++ G+ +++R ++   + A +   G    V  Y I++ ++ ++  +++ 
Sbjct: 666 NVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725

Query: 602 ALFFNVMVKAGL-VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              F+ M  AG   P+ + +  ++  L +  ++    + ++K+   S  LD S   +LI+
Sbjct: 726 DDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLID 785

Query: 661 GLWKEG 666
               +G
Sbjct: 786 LFSSKG 791



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 192/436 (44%), Gaps = 12/436 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + +T  I M C  R ++ +  +  F  +    L  D +    L+  LCE  R  +A 
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLC---EVGKFDESVNFLEDKCGYVTSP----HNAL 379
           DIL   M  +G  P    +  +++ LC   + G+ DE +  + +  G V  P    +N +
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG-GAVCLPNAVAYNTV 222

Query: 380 LECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++     G    A  +  +M  R I+ D  ++N  +  LC+   + KA  +L +MV   V
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           +PD  TY++ + G      +++A+RV +++++Q ++ D ++ + L+  LC+  KI +A +
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           VF  M+  G      S+ I++ G      +     L +L  S G +  +  +  ++    
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K        ++  +M  +G   DV  Y  +I ++    K+ D    FN M+  G+ P   
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIS 462

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T   L+ G      L      + ++++     D   +N +IN L K G    A  + D  
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFT 522

Query: 679 LGKGWVPDATTHGLLV 694
           +  G  P+   +  L+
Sbjct: 523 ISIGLHPNVMVYNTLM 538



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 150/327 (45%), Gaps = 8/327 (2%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP--IRWLCENEEIRKAYE-LLGR 432
           +  L++CC  A +  L      ++    +   D+  I   +R LCE +   +A + LL R
Sbjct: 111 YGILMDCCTRAHRPKLTLAFFGQVLKTGLG-IDTIMISNLLRGLCEAKRTAEALDILLHR 169

Query: 433 MVVSSVVPDCATYSAFVLGKC---KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           M     VPD  +Y   +   C   K    ++ LR+  +  A  L  ++++Y+ +++G  +
Sbjct: 170 MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLP-NAVAYNTVIDGFFK 228

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
              + +A ++F  M + G S   S++N ++  LC  R +DKA  +       G      T
Sbjct: 229 EGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWT 288

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ G     + K+ + V  +M  +G   DV     L+ S+ +  K+KD    F+ M 
Sbjct: 289 YNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMA 348

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G   D  +   +L+G A    L  ++   N ++SD    DS ++N+LI    K G+  
Sbjct: 349 MKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLD 408

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS 696
           +A+ + + M  +G  PD  T+  ++ +
Sbjct: 409 RATIIFNEMREQGVEPDVVTYSTVIAA 435


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 191/428 (44%), Gaps = 35/428 (8%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVDDSV 257
            P+V   N L+    +    + ALD FRR+ ++G C PN+ +F+ ++  L   SR  D++
Sbjct: 8   APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
           ++  EM   G+Q +++    +I   CR   L +A RL   M A   + D  TY  L++ L
Sbjct: 68  AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL 127

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
            +  R   A ++  +M   G  P   V+  ++  L + GK DE++  LED          
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLED---------- 177

Query: 378 ALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                                  +RK  + DC ++NI I  L       KAY   G M  
Sbjct: 178 ----------------------MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 215

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD  TY+  + G  KL   ++A  +F ++ A   + D  ++  L++ L +  ++ +
Sbjct: 216 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 275

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+E    + K G   +S  +N LI G C   +VDK   L            + TYT ++L
Sbjct: 276 ALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVL 335

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  +       + +L +M+ EG    +  Y +LI+S+S   +++D    F  M+  G  P
Sbjct: 336 GFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNP 395

Query: 616 DRETMLSL 623
           D +T  +L
Sbjct: 396 DMQTYSAL 403



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 18/359 (5%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV------LGAIVEEKRGFADFVFV 189
           +LV       R   A+ V   M   G +  V+V N +      LG + + +R       +
Sbjct: 52  TLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARR-------L 104

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
              M     V +V T +YL++ L +  R   AL+ F  M K GC P++  + ++I  L  
Sbjct: 105 LHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGK 164

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             +VD+++ +L +M   GI  +   Y  +I +L    + E+A   F MM+     PD +T
Sbjct: 165 QGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVT 224

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-- 367
           Y  L+N L +  R D+A D+ ++M      P    F  ++  L + G+ ++++       
Sbjct: 225 YNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV 284

Query: 368 KCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIR 424
           K G+V +   +NAL+   C +G+      + + M +     D  ++ I +          
Sbjct: 285 KMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTS 344

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            A ELL  MV     P  ATY+  +         EDA  +F+++ A+    D  +YS L
Sbjct: 345 MAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 6/355 (1%)

Query: 348 IVRGLCEVGKFDESVNFL-----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
           ++ G C+ G  D +++       E  C       + L+   C   +   A  + ++M   
Sbjct: 17  LIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGA 76

Query: 403 KI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            + AD +  N  I   C    +R+A  LL  M   + V D  TYS  +    K      A
Sbjct: 77  GLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKA 136

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           L VF  +     + D++ Y+ L+  L +  K+ EA+E+   M++ G      ++NI+I  
Sbjct: 137 LEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDV 196

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           L    + +KA     +      S    TY  ++ GL KL+R  +   +  +M    C  D
Sbjct: 197 LSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPD 256

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  +  LI ++++  +++D       +VK G VP+     +L+ G     Q+        
Sbjct: 257 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQ 316

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            ++  S   DS  Y IL+ G  + G TS A  LL  M+ +G  P   T+ +L+ S
Sbjct: 317 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRS 371



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/403 (21%), Positives = 164/403 (40%), Gaps = 6/403 (1%)

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEV 355
           M    D  PD + Y  LI   C+    D A D+   +   G   P    F  +V  LC++
Sbjct: 1   MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 60

Query: 356 GKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKM-ADRKIADCDSW 410
            +  +++   ++  G          N L+ C C  G    A+ +L  M A   + D  ++
Sbjct: 61  SRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTY 120

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           +  +  L +     KA E+   M  +  +PD   Y+  +    K    ++AL +   ++ 
Sbjct: 121 SYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 180

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + ++ D  +Y+ +++ L    +  +A   F  M +   S    ++N L+ GL  +R+ D+
Sbjct: 181 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDE 240

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A  L     ++      +T+  ++  L K  R +D L   A+++  G   +   Y  LI 
Sbjct: 241 ACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALIS 300

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
                 ++      F  M++    PD  T   L+ G +      +    + ++V +    
Sbjct: 301 GFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTP 360

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
             + YN+LI  L   G    A  L   M+ KG+ PD  T+  L
Sbjct: 361 ALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            +VK G VPN    N L+     + +++   + F+ M +  C P+S T+ I++ G     
Sbjct: 282 RLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRG 341

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
               ++ +L EM   G    L+ Y  +I  L    ++E+A  LFK M A    PD  TY 
Sbjct: 342 HTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYS 401

Query: 312 ELIN 315
            L N
Sbjct: 402 ALPN 405


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 130/570 (22%), Positives = 250/570 (43%), Gaps = 23/570 (4%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           S+ V NV++  +  E     D   V+ +  + G+  N+ + N+LL    E N+ E     
Sbjct: 177 SIIVANVLI-KVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSL 235

Query: 225 FRRMHKKGCCPNSRTFEIVI----KGLIA-NSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           F  +   G  PN  T+ I++    KG    N  +  +  +L EM   G    +  Y   I
Sbjct: 236 FEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LCR   +E A+RL + +R  +   +   Y  +I+  C N  L +A ++LEDM   G++
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           PT   +  ++ GLC+ G+ +++++ +E+       P    +++L +  C +G   ++  +
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415

Query: 396 LEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
              + A+    D  S+N  I       ++  A +L+  M ++  VP+  T++  + G CK
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               + AL VF  +    + L+  + + + +   +     EA+++   +   G   +S +
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +NI+I  LC  +K +KA  +  +   +        Y  ++ G  K       L++ A+ML
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G    +  Y +LI   S ++K+++    F  M+K GLVPD      ++ G      + 
Sbjct: 596 KVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMK 655

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   ++    +  +   Y  LI+G +K     +A +L + M      PD  T+  L+
Sbjct: 656 SAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715

Query: 695 GSSVGEEIDSRRFAFDSSSFPDSVSDILAE 724
                       F + S  + D V ++  E
Sbjct: 716 ------------FGYQSLGYSDRVREMFNE 733



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 184/417 (44%), Gaps = 12/417 (2%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +  A +    M   G  P + ++ I+I GL    +V+ ++ ++ EM    ++  L  Y+ 
Sbjct: 339 LHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSS 398

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +   LC+    E ++ +F  + A     D ++Y  LIN       +  A  ++ +M + G
Sbjct: 399 LFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNG 458

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPH--NALLECCCNAGKFFLAK 393
             P    F  ++ G C+  + D+++       K G   +    N + +     G F+ A 
Sbjct: 459 SVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEAL 518

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            ++ ++ D  I  +  ++NI I+WLC+ ++  KA+E+L  M+ ++V P    Y+  + G 
Sbjct: 519 KLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGY 578

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            K  N   AL ++ ++    +    ++Y+ L+       K+ EA  +F  M K G     
Sbjct: 579 AKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDE 638

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             F  +I G C +  +  A  L       G S    TYT ++ G  K++R      +  +
Sbjct: 639 IIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNK 698

Query: 573 MLVEGCALDVEAYCILI---QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL-LH 625
           M  +    D   Y  LI   QS+   +++++    FN M + G+ P+     +L LH
Sbjct: 699 MKRDNVTPDGLTYTALIFGYQSLGYSDRVRE---MFNEMKENGVFPNYTAYATLGLH 752



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 105/511 (20%), Positives = 213/511 (41%), Gaps = 76/511 (14%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           T  TY   I  L  AG VE    L +++     P       +++  F  +  ++ A  +L
Sbjct: 287 TVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELL 346

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLF 213
            +M S G   +   +++++  +   K+G  +    + +EMV++ + P++ T + L + L 
Sbjct: 347 EDMRSHGISPTAYSYSILIDGLC--KKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLC 404

Query: 214 ETNRIESALDQFR-----------------------------------RMHKKGCCPNSR 238
           ++   E +L  F                                     M   G  PNS 
Sbjct: 405 KSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSF 464

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM--LCRENKLEEAIRLFK 296
           TF  +I G     R+D ++ +   M  +G+QL +  +TC I      RE    EA++L  
Sbjct: 465 TFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNI--FTCNIMADEFNREGHFWEALKLIN 522

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            ++ L ++P+  TY  +I  LC+  + + A ++L  M+   + P            C + 
Sbjct: 523 EVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFP------------CAI- 569

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIR 415
                 N L D     ++P  ALL              +  KM    I     ++ + I 
Sbjct: 570 ----HYNTLIDGYAKQSNPTKALL--------------LYAKMLKVGIPPSIVTYTMLIN 611

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
                 ++++AY L   M+   +VPD   ++  + G CK+ + + A  ++ ++S      
Sbjct: 612 MFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSP 671

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           + ++Y+ L++G  +++++ +A  +F  M ++  +    ++  LI+G   +   D+   + 
Sbjct: 672 NVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMF 731

Query: 536 SLAYSSGT--SYTTSTYTKIMLGLVKLQRAK 564
           +    +G   +YT      + LG+V+ + AK
Sbjct: 732 NEMKENGVFPNYTAYATLGLHLGVVREEPAK 762


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 229/532 (43%), Gaps = 49/532 (9%)

Query: 192  EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            EM   G +P + T   L+  L +   +E     F  M K+G  PN + +  VI  L    
Sbjct: 1207 EMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCR 1266

Query: 252  RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
                ++ IL +MF  G   ++  +  +I  LC E  + +A    +     +L P++L+Y 
Sbjct: 1267 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1326

Query: 312  ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
             LI+  C    L  A+D+L +M+  G TP    F  ++ GL   GK  E++         
Sbjct: 1327 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL--------- 1377

Query: 372  VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
                                   + EKM +R++  D + +N+ I  LC+   +  A  +L
Sbjct: 1378 ----------------------IVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNIL 1415

Query: 431  GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
              M+  +V PD   Y+  + G  +  N  DA ++F  +  + +  D +S + +++G CQ 
Sbjct: 1416 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQF 1475

Query: 491  EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
              ++EA+     M K GC     ++  +I G      ++ A+R               TY
Sbjct: 1476 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1535

Query: 551  TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
            + ++ G  K         + A M  E  + +V  Y ILI S+ +++K+    L+F  M+ 
Sbjct: 1536 SSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1595

Query: 611  AGLVPDRETMLSLLHGLA------------DGSQLHLVSSGI---NKLVSDSEVLDSSMY 655
                P+  T+  L++GL             + S++H   + +    KLV D     +S Y
Sbjct: 1596 NHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAY 1655

Query: 656  NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG-SSVGEEIDSR 705
            N +I  L +  +  +A    + M  KG+VP+  T   LL G  SVG+ ++ R
Sbjct: 1656 NAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWR 1707



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 202/546 (36%), Gaps = 74/546 (13%)

Query: 191  KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIVIKGLIA 249
            + M  AG  P    L  L+    +   +  A     R+ ++ G  P       ++K L+ 
Sbjct: 1065 QSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVE 1124

Query: 250  NSRVDDSVSILGEMF--DLGIQLELSFYTCI-IPMLCRENKLEEAIRLFKMMRALDLMPD 306
              R DD+  +  EM   D G     ++ TC+ +  LC E ++EE ++L +       +P 
Sbjct: 1125 QRRWDDARKLYDEMLGKDSGAD---NYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1181

Query: 307  ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             + Y  LI+  C    +     +L +M   G  PT   +  ++  L + G  ++      
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEK------ 1235

Query: 367  DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
                                G  FL      +M  R  + +   +N  I  LC+     +
Sbjct: 1236 -------------------IGSLFL------EMRKRGFSPNVQIYNSVIDALCKCRSATQ 1270

Query: 426  AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            A  +L +M  S   PD  T++  + G C   +   A    R+   + L  + +SY+ L+ 
Sbjct: 1271 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1330

Query: 486  GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            G C   ++  A ++   M   G +    +F  LI+GL V  KV +A+ +R          
Sbjct: 1331 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1390

Query: 546  TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              + Y  ++ GL K +       +L +ML +    D   Y  LI        L D    F
Sbjct: 1391 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1450

Query: 606  ---------------NVMVKA--------------------GLVPDRETMLSLLHGLADG 630
                           N M+K                     G +PD  T  +++ G A  
Sbjct: 1451 EFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1510

Query: 631  SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
              L+     +  ++      +   Y+ LING  K G T  A  L   M  +   P+  T+
Sbjct: 1511 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTY 1570

Query: 691  GLLVGS 696
             +L+GS
Sbjct: 1571 TILIGS 1576



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/403 (21%), Positives = 165/403 (40%), Gaps = 6/403 (1%)

Query: 305  PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            P  L +  L+  L  + R D  +D L+ M + G  PT      +V    + G   ++   
Sbjct: 1039 PTPLAHSALLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKM 1098

Query: 365  LED-KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
             E  +  Y + P     N LL+      ++  A+ + ++M  +   AD  S  + +R LC
Sbjct: 1099 CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC 1158

Query: 419  ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
                + +  +L+     +  +P    Y+  + G C+  +    L +  ++  +  +   +
Sbjct: 1159 LERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLV 1218

Query: 479  SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            +Y  L+  L +   + +   +F  M K G S +   +N +I  LC  R   +A+ +    
Sbjct: 1219 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278

Query: 539  YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            ++SG      T+  ++ GL      +     L + +      +  +Y  LI     + +L
Sbjct: 1279 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1338

Query: 599  KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
               +     M+  G  PD  T  +L+HGL    ++        K+       D ++YN+L
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1398

Query: 659  INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
            I+GL K+ +   A  +L+ ML K   PD   +  L+   +  E
Sbjct: 1399 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 1441



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 27/418 (6%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            T+  +I  L   G+V + E   +  ++      + +   L+  F     +  A  +LV M
Sbjct: 1289 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1348

Query: 158  NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
               G    V  F  ++  +V   +  ++ + V ++M +  + P+V+  N L+  L +   
Sbjct: 1349 MGRGHTPDVVTFGALIHGLVVAGK-VSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1407

Query: 218  IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            + +A +    M +K   P+   +  +I G I +  + D+  I   M   GI  ++     
Sbjct: 1408 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNA 1467

Query: 278  IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            +I   C+   + EAI     MR +  +PDE TY  +I+   +   L+ A   L DMI   
Sbjct: 1468 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1527

Query: 338  LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
              P    +  ++ G C+ G  D +     +      SP    +  L+       K   A 
Sbjct: 1528 CKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1587

Query: 394  CILEKMADRKIADCDSWNIPIRWL----------------CENEEIRKAYELL---GRMV 434
               E M    +  C   ++ + +L                C   E+     LL    ++V
Sbjct: 1588 LYFETML---LNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLV 1644

Query: 435  VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
                 P  + Y+A +   C+     +AL    +++ +  V + I++  L+ G C V K
Sbjct: 1645 FDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702


>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
 gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
          Length = 448

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 200/442 (45%), Gaps = 39/442 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLV 155
           D+Y  ++  L    +V++   +   MV E Y P+V    + LV  F    RV     +  
Sbjct: 11  DSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGL-LVDKFCEMKRVGEVCELFQ 69

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM-VKAGIVPNVDTLNYLLEVLFE 214
            + S G  + +  +N +L A++    G  D  F + ++ V  G +P+V     +L+ L +
Sbjct: 70  ELESNGVAVGMLAYNAILKALM--CSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIK 127

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           T +   A +    M KK   P+  T+  +I  L  ++R DD++ +   M +  I   +  
Sbjct: 128 TGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDV 186

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT ++   CR  KL+ A RLF  M      P   TY  L+ CLC   R   A DI   M 
Sbjct: 187 YTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMR 246

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G  P ++ +  ++ G                               CC AG+   AK 
Sbjct: 247 SRGHVPDENTYASLIYG-------------------------------CCMAGRITEAKV 275

Query: 395 ILEKMADRKIADCDS--WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
           + +++ + + A  D+  +N+ I  LC   ++ +A E+   MV    +P   TY+A ++G 
Sbjct: 276 LFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGF 335

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            K    + AL++FR +  +    +++ YS  ++GLC+V KI EA E F    + GC   +
Sbjct: 336 FKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDN 395

Query: 513 SSFNILIYGLCVMRKVDKAIRL 534
            ++N LI GL    ++D+A RL
Sbjct: 396 VTYNALIRGLFGANRMDEAHRL 417



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 178/430 (41%), Gaps = 40/430 (9%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV  G  P+V T   L++   E  R+    + F+ +   G       +  ++K L+ +  
Sbjct: 36  MVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGD 95

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
            D            G    +  Y  ++  L +  K  EA  +   M    + PD +TY  
Sbjct: 96  FDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTA 154

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDK 368
           LI+ LC++ R DDA  + + M+   + P  DV+  ++   C   K D +    V  ++  
Sbjct: 155 LISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRG 214

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            G   S +  LL C CN G+ +LA                                  Y+
Sbjct: 215 YGPSASTYGLLLRCLCNGGRSYLA----------------------------------YD 240

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEGL 487
           +   M     VPD  TY++ + G C      +A  +F++V   +   LD+  Y+ L+EGL
Sbjct: 241 IHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGL 300

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+ EA+EV   M   GC  +  ++N LI G     +VDKA++L       G S  T
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNT 360

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             Y+  + GL K+ +  +      Q +  GC  D   Y  LI+ +   N++ +    +  
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420

Query: 608 MVKAGLVPDR 617
           M + G + DR
Sbjct: 421 MGERGYIADR 430



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/444 (20%), Positives = 188/444 (42%), Gaps = 5/444 (1%)

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M + G+  +   Y  ++  L + + +++A  +   M      PD +T   L++  CE  R
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NA 378
           + +  ++ +++   G+      +  I++ L   G FD    F +   G  + PH      
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +L+C    GK   A  ++ +M  + + D  ++   I  LC++     A ++   MV   +
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEI 180

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           VP+   Y++ +   C+    + A R+F ++  +     + +Y  L+  LC   +   A +
Sbjct: 181 VPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYD 240

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIMLGL 557
           +   M   G     +++  LIYG C+  ++ +A +  + +            Y  ++ GL
Sbjct: 241 IHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGL 300

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            +  + ++ L V A M+ +GC   ++ Y  LI    + N++      F  M + G  P+ 
Sbjct: 301 CRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNT 360

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
               + + GL    +++       + V    V D+  YN LI GL+      +A  L   
Sbjct: 361 MIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYRE 420

Query: 678 MLGKGWVPDATTHGLLVGSSVGEE 701
           M  +G++ D +   L    S  E+
Sbjct: 421 MGERGYIADRSLRTLAFQRSREEQ 444



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/446 (20%), Positives = 189/446 (42%), Gaps = 40/446 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G+VP+ D+ N L+  L + + ++ A      M  +G  P+  T  +++       R
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V +   +  E+   G+ + +  Y  I+  L      +   +   +      +P  L Y+ 
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +++CL +  +  +A++++ +MI   + P    +  ++  LC+  + D+++          
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMK--------- 170

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
                                 + + M +++I  + D +   +   C   ++  AY L  
Sbjct: 171 ----------------------VFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFV 208

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYED---ALRVFRQVSAQSLVLDSISYSKLVEGLC 488
            M+     P  +TY   +L +C LCN      A  +   + ++  V D  +Y+ L+ G C
Sbjct: 209 EMIQRGYGPSASTYG--LLLRC-LCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCC 265

Query: 489 QVEKITEAVEVFC-CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
              +ITEA  +F   +      L +  +N+LI GLC   KV++A+ + +     G   T 
Sbjct: 266 MAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTL 325

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  +++G  K       L +   M  +G + +   Y   I  + +  K+ +   FF  
Sbjct: 326 QTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQ 385

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQL 633
            V+ G VPD  T  +L+ GL   +++
Sbjct: 386 SVERGCVPDNVTYNALIRGLFGANRM 411



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 94  HTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS-LVFSFVNHYRVNGA 150
           H  D  TY  +I    +AG + E + L + +++     +   + + L+       +V  A
Sbjct: 250 HVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEA 309

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           + V   M   G   ++  +N ++    +        + +++ M + G  PN    +  ++
Sbjct: 310 LEVTAGMVDKGCIPTLQTYNALIMGFFKANE-VDKALQLFRAMEEKGFSPNTMIYSTFID 368

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
            L +  +I  A + F++  ++GC P++ T+  +I+GL   +R+D++  +  EM + G   
Sbjct: 369 GLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIA 428

Query: 271 ELSFYT 276
           + S  T
Sbjct: 429 DRSLRT 434



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           ++ A  +FK V   ++ Q  A  Y  +I  L  A  VEE   +   MV +      +   
Sbjct: 270 ITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYN 329

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F     V+ A+++   M   GF  +  +++  +  + +  +      F +++ V+
Sbjct: 330 ALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEF-FQQSVE 388

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
            G VP+  T N L+  LF  NR++ A   +R M ++G
Sbjct: 389 RGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERG 425


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 208/467 (44%), Gaps = 6/467 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           VF++++    E +R    F   Y  M + GIVP ++T N +L +  + NR+E A   +  
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYM-MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +        TF I++  L    ++  +   +G M  LG +  +  Y  II        
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E A R+   MR   + PD  TY  LI+ +C+  RL++A+ + + M+ IGL P    +  
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 348 IVRGLCEVGKFDESVNFLED--KCGYVT--SPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C  G  + + ++ ++  K G +   S +N L+      G+   A  ++++M  + 
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            I D  ++NI I         +KA++L   M+   + P   TY++ +    +    ++A 
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F ++  Q +  D I ++ +V+G C    +  A  +   M +        +FN L+ G 
Sbjct: 458 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 517

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   KV++A  L       G      +Y  ++ G  +    KD   V  +ML  G    +
Sbjct: 518 CREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTL 577

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             Y  LI+ + +  +          MV  G+ PD  T LSL+ G+ +
Sbjct: 578 LTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 624



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 170/373 (45%), Gaps = 7/373 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV  +  +++  + +   + GA R+L  M   G +     +  ++  + +E R   +  
Sbjct: 260 PNV-VSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR-LEEAS 317

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            ++ +MV+ G+VPN  T N L++       +E A      M KKG  P+  T+ +++  L
Sbjct: 318 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R+ ++  ++ EM   GI  +   Y  +I    R    ++A  L   M +  + P  
Sbjct: 378 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTH 437

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  LI  L    R+ +A+D+ E ++  G++P   +F  +V G C  G  + +   L++
Sbjct: 438 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE 497

Query: 368 KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                  P     N L++  C  GK   A+ +L++M  R I  D  S+N  I       +
Sbjct: 498 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 557

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I+ A+ +   M+     P   TY+A +   CK    + A  + +++  + +  D  +Y  
Sbjct: 558 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 617

Query: 483 LVEGLCQVEKITE 495
           L+EG+  V+ + E
Sbjct: 618 LIEGMGNVDTLVE 630



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 202/467 (43%), Gaps = 15/467 (3%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  ++ + C   + +EA + F MM+   ++P   T  ++++   +  R++ A  +  +M 
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            + ++ T   F  +V  LC+ GK  ++  F+    G    P    +N ++    + G   
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A+ IL+ M  + I  D  ++   I  +C+   + +A  L  +MV   +VP+  TY+  +
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
            G C   + E A   +R    +  ++ S+S Y+ LV  L    ++ EA ++   M K G 
Sbjct: 340 DGYCNKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 398

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
              + ++NILI G        KA  L +   S G   T  TYT ++  L +  R K+   
Sbjct: 399 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 458

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +  ++L +G + DV  +  ++        ++   +    M +  + PD  T  +L+ G  
Sbjct: 459 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 518

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              ++      ++++       D   YN LI+G  + G    A  + D ML  G+ P   
Sbjct: 519 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLL 578

Query: 689 THGLLVG-------SSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGN 728
           T+  L+          + EE+  +       S  DS    L EG+GN
Sbjct: 579 TYNALIKCLCKNQEGDLAEEL-LKEMVNKGISPDDSTYLSLIEGMGN 624



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 171/400 (42%), Gaps = 21/400 (5%)

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL--LECCCNAGKFFL-------AKC 394
           VF  +VR  CE+ + DE+      KC Y+      +  +E C +    FL       A  
Sbjct: 159 VFDLLVRVCCELRRADEAF-----KCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 213

Query: 395 ILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M   +I+    ++NI +  LC+  +++KA E +G M      P+  +Y+  + G  
Sbjct: 214 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 273

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
              N E A R+   +  + +  DS +Y  L+ G+C+  ++ EA  +F  M + G   ++ 
Sbjct: 274 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI G C    +++A   R      G   + STY  ++  L    R  +   ++ +M
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G   D   Y ILI   S     K      N M+  G+ P   T  SL++ L+  +++
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                   K++      D  M+N +++G    G   +A  LL  M  K   PD  T   L
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 694 VGSSVGE-EIDSRRFAFDSSSF----PDSVS-DILAEGLG 727
           +     E +++  R   D        PD +S + L  G G
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG 553



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 30/298 (10%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVR 131
           N  DL  A   ++   ++K    +  TY  ++  L + G + E + + + M K+      
Sbjct: 344 NKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK------ 396

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFV- 189
             +I    ++  +  +NG  R       G  K + D+ N +L   +E     +   ++V 
Sbjct: 397 -GIIPDAITY--NILINGYSRC------GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447

Query: 190 ------------YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
                       +++++  G+ P+V   N +++       +E A    + M +K   P+ 
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 507

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +++G     +V+++  +L EM   GI+ +   Y  +I    R   +++A R+   
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 567

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           M ++   P  LTY  LI CLC+N   D A ++L++M+  G++P D  ++ ++ G+  V
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 208/467 (44%), Gaps = 6/467 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           VF++++    E +R    F   Y  M + GIVP ++T N +L +  + NR+E A   +  
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYM-MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +        TF I++  L    ++  +   +G M  LG +  +  Y  II        
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E A R+   MR   + PD  TY  LI+ +C+  RL++A+ + + M+ IGL P    +  
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 348 IVRGLCEVGKFDESVNFLED--KCGYVT--SPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C  G  + + ++ ++  K G +   S +N L+      G+   A  ++++M  + 
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            I D  ++NI I         +KA++L   M+   + P   TY++ +    +    ++A 
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F ++  Q +  D I ++ +V+G C    +  A  +   M +        +FN L+ G 
Sbjct: 480 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 539

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   KV++A  L       G      +Y  ++ G  +    KD   V  +ML  G    +
Sbjct: 540 CREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTL 599

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             Y  LI+ + +  +          MV  G+ PD  T LSL+ G+ +
Sbjct: 600 LTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 646



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 170/373 (45%), Gaps = 7/373 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV  +  +++  + +   + GA R+L  M   G +     +  ++  + +E R   +  
Sbjct: 282 PNV-VSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR-LEEAS 339

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            ++ +MV+ G+VPN  T N L++       +E A      M KKG  P+  T+ +++  L
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R+ ++  ++ EM   GI  +   Y  +I    R    ++A  L   M +  + P  
Sbjct: 400 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTH 459

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           +TY  LI  L    R+ +A+D+ E ++  G++P   +F  +V G C  G  + +   L++
Sbjct: 460 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE 519

Query: 368 KCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                  P     N L++  C  GK   A+ +L++M  R I  D  S+N  I       +
Sbjct: 520 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 579

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I+ A+ +   M+     P   TY+A +   CK    + A  + +++  + +  D  +Y  
Sbjct: 580 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 639

Query: 483 LVEGLCQVEKITE 495
           L+EG+  V+ + E
Sbjct: 640 LIEGMGNVDTLVE 652



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 202/467 (43%), Gaps = 15/467 (3%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  ++ + C   + +EA + F MM+   ++P   T  ++++   +  R++ A  +  +M 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            + ++ T   F  +V  LC+ GK  ++  F+    G    P    +N ++    + G   
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A+ IL+ M  + I  D  ++   I  +C+   + +A  L  +MV   +VP+  TY+  +
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
            G C   + E A   +R    +  ++ S+S Y+ LV  L    ++ EA ++   M K G 
Sbjct: 362 DGYCNKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 420

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
              + ++NILI G        KA  L +   S G   T  TYT ++  L +  R K+   
Sbjct: 421 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 480

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +  ++L +G + DV  +  ++        ++   +    M +  + PD  T  +L+ G  
Sbjct: 481 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 540

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              ++      ++++       D   YN LI+G  + G    A  + D ML  G+ P   
Sbjct: 541 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLL 600

Query: 689 THGLLVG-------SSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGN 728
           T+  L+          + EE+  +       S  DS    L EG+GN
Sbjct: 601 TYNALIKCLCKNQEGDLAEEL-LKEMVNKGISPDDSTYLSLIEGMGN 646



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 171/400 (42%), Gaps = 21/400 (5%)

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL--LECCCNAGKFFL-------AKC 394
           VF  +VR  CE+ + DE+      KC Y+      +  +E C +    FL       A  
Sbjct: 181 VFDLLVRVCCELRRADEAF-----KCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 235

Query: 395 ILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M   +I+    ++NI +  LC+  +++KA E +G M      P+  +Y+  + G  
Sbjct: 236 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 295

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
              N E A R+   +  + +  DS +Y  L+ G+C+  ++ EA  +F  M + G   ++ 
Sbjct: 296 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N LI G C    +++A   R      G   + STY  ++  L    R  +   ++ +M
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             +G   D   Y ILI   S     K      N M+  G+ P   T  SL++ L+  +++
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                   K++      D  M+N +++G    G   +A  LL  M  K   PD  T   L
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 694 VGSSVGE-EIDSRRFAFDSSSF----PDSVS-DILAEGLG 727
           +     E +++  R   D        PD +S + L  G G
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG 575



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 30/298 (10%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVR 131
           N  DL  A   ++   ++K    +  TY  ++  L + G + E + + + M K+      
Sbjct: 366 NKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK------ 418

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFV- 189
             +I    ++  +  +NG  R       G  K + D+ N +L   +E     +   ++V 
Sbjct: 419 -GIIPDAITY--NILINGYSRC------GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469

Query: 190 ------------YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
                       +++++  G+ P+V   N +++       +E A    + M +K   P+ 
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 529

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            TF  +++G     +V+++  +L EM   GI+ +   Y  +I    R   +++A R+   
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 589

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           M ++   P  LTY  LI CLC+N   D A ++L++M+  G++P D  ++ ++ G+  V
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 197/440 (44%), Gaps = 6/440 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   G+ P+  T+N +LE+  E   IE A + F  M  +G  P+S ++++++ G   + 
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++ ++   L  M   G   + +  T I+  LC    +  AI  F+ M  L   P+ + + 
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-----E 366
            LI+ LC+   +  A ++LE+M+  G  P       ++ GLC+ G  +++          
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           D        + +++   C   K   A+ +  +M ++ +  + +++   I   C+     +
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           AYEL+  M     +P+  TY+A +   CK     +A  +  +  +  L  D ++Y+ L++
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+   I +A+  FC M+K G        NILI   C  +K+ ++ RL  L  S G   
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TYT ++    K       L     M   GC  D   Y  LI  + +++ + +    +
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591

Query: 606 NVMVKAGLVPDRETMLSLLH 625
             M+  GL P   T ++L +
Sbjct: 592 EAMIDRGLSPPEVTRVTLAY 611



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 197/488 (40%), Gaps = 39/488 (7%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           +L    E  R+  A+     M  +G  P+S T   V++  +    ++ + ++  EM   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +  + S Y  ++    R+ K++EA R    M     +PD  T   ++  LCEN  ++ A 
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECC 383
                MI +G  P    F  ++ GLC+ G   ++   LE+       P    H AL++  
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV-PDC 442
           C  G                      W              KA+ L  ++V S    P+ 
Sbjct: 333 CKRG----------------------WT------------EKAFRLFLKLVRSDTYKPNV 358

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY++ + G CK      A  +F ++  Q L  +  +Y+ L+ G C+      A E+   
Sbjct: 359 HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL 418

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   G   +  ++N  I  LC   +  +A  L + A+S G      TYT ++    K   
Sbjct: 419 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 478

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
               L    +M   G   D+    ILI +   Q K+K+    F ++V  GL+P +ET  S
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           ++        + L     + +     V DS  Y  LI+GL K+ +  +A  L + M+ +G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598

Query: 683 WVPDATTH 690
             P   T 
Sbjct: 599 LSPPEVTR 606



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 208/461 (45%), Gaps = 19/461 (4%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++ G +P+  T   +L  L E   +  A+  FR+M   G  PN   F  +I GL     
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYE 311
           +  +  +L EM   G +  +  +T +I  LC+    E+A RLF K++R+    P+  TY 
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD---ESVNFLEDK 368
            +I   C+  +L+ A  +   M   GL P  + +  ++ G C+ G F    E +N + D+
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            G++ +   +NA ++  C   +   A  +L K     + AD  ++ I I+  C+  +I +
Sbjct: 423 -GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A     RM  +    D    +  +   C+    +++ R+F+ V +  L+    +Y+ ++ 
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+   I  A++ F  M ++GC   S ++  LI GLC    VD+A +L       G S 
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              T   +     K   + + +++L  +  +   L +     L++ +  + K+   ALFF
Sbjct: 602 PEVTRVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFF 658

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
             +++     DR T+ +     ++        SG N LV+D
Sbjct: 659 QKLLEKDSSADRVTLAAFTTACSE--------SGKNNLVTD 691



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 175/424 (41%), Gaps = 6/424 (1%)

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C++       +L EA+ +   M+   L P  +T   ++    E   ++ A ++ ++M V 
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLA 392
           G+ P    +  +V G    GK  E+  +L         P NA    +L   C  G    A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
                KM D     +  ++   I  LC+   I++A+E+L  MV +   P+  T++A + G
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331

Query: 452 KCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
            CK    E A R+F + V + +   +  +Y+ ++ G C+ +K+  A  +F  M + G   
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           + +++  LI G C      +A  L +L    G      TY   +  L K  RA +   +L
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +    G   D   Y ILIQ   +QN +     FF  M K G   D      L+      
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            ++         +VS   +     Y  +I+   KEG    A      M   G VPD+ T+
Sbjct: 512 KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 571

Query: 691 GLLV 694
           G L+
Sbjct: 572 GSLI 575



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 153/365 (41%), Gaps = 6/365 (1%)

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAK 393
           L    +V   ++R   E+G+ +E+V  + D      +P     N +LE     G    A+
Sbjct: 143 LQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAE 202

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + ++M+ R +  D  S+ + +     + +I++A   L  M+    +PD AT +  +   
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+      A+  FR++       + I+++ L++GLC+   I +A E+   M +NG   + 
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322

Query: 513 SSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            +   LI GLC     +KA RL   L  S        TYT ++ G  K  +     ++ +
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M  +G   +V  Y  LI    +           N+M   G +P+  T  + +  L   S
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +       +NK  S     D   Y ILI    K+   +QA      M   G+  D   + 
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502

Query: 692 LLVGS 696
           +L+ +
Sbjct: 503 ILIAA 507



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 2/248 (0%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           PNV     S++  +    ++N A  +   M   G   +V+ +  ++    +    F    
Sbjct: 356 PNV-HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG-SFGRAY 413

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            +   M   G +PN+ T N  ++ L + +R   A +   +    G   +  T+ I+I+  
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
              + ++ +++    M   G + ++     +I   CR+ K++E+ RLF+++ +L L+P +
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            TY  +I+C C+   +D A     +M   G  P    +  ++ GLC+    DE+    E 
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 593

Query: 368 KCGYVTSP 375
                 SP
Sbjct: 594 MIDRGLSP 601



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 3/161 (1%)

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV--EAYCILIQSMS 593
           SLA  SG S     +    +G  K +    L +V A  L+    L    E    ++++ S
Sbjct: 100 SLASESG-SMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFS 158

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           E  +L +       M   GL P   TM  +L    +   +    +  +++     V DSS
Sbjct: 159 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSS 218

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            Y +++ G +++G   +A   L  M+ +G++PD  T  L++
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL 259


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 229/532 (43%), Gaps = 49/532 (9%)

Query: 192  EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            EM   G +P + T   L+  L +   +E     F  M K+G  PN + +  VI  L    
Sbjct: 1038 EMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCR 1097

Query: 252  RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
                ++ IL +MF  G   ++  +  +I  LC E  + +A    +     +L P++L+Y 
Sbjct: 1098 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1157

Query: 312  ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
             LI+  C    L  A+D+L +M+  G TP    F  ++ GL   GK  E++         
Sbjct: 1158 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL--------- 1208

Query: 372  VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
                                   + EKM +R++  D + +N+ I  LC+   +  A  +L
Sbjct: 1209 ----------------------IVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNIL 1246

Query: 431  GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
              M+  +V PD   Y+  + G  +  N  DA ++F  +  + +  D +S + +++G CQ 
Sbjct: 1247 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQF 1306

Query: 491  EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
              ++EA+     M K GC     ++  +I G      ++ A+R               TY
Sbjct: 1307 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1366

Query: 551  TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
            + ++ G  K         + A M  E  + +V  Y ILI S+ +++K+    L+F  M+ 
Sbjct: 1367 SSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1426

Query: 611  AGLVPDRETMLSLLHGLA------------DGSQLHLVSSGI---NKLVSDSEVLDSSMY 655
                P+  T+  L++GL             + S++H   + +    KLV D     +S Y
Sbjct: 1427 NHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAY 1486

Query: 656  NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG-SSVGEEIDSR 705
            N +I  L +  +  +A    + M  KG+VP+  T   LL G  SVG+ ++ R
Sbjct: 1487 NAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWR 1538



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 202/546 (36%), Gaps = 74/546 (13%)

Query: 191  KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIVIKGLIA 249
            + M  AG  P    L  L+    +   +  A +   R+ ++ G  P       ++K L+ 
Sbjct: 896  QSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVE 955

Query: 250  NSRVDDSVSILGEMF--DLGIQLELSFYTCI-IPMLCRENKLEEAIRLFKMMRALDLMPD 306
              R DD+  +  EM   D G     ++ TC+ +  LC E ++EE ++L +       +P 
Sbjct: 956  QRRWDDARKLYDEMLGKDSGAD---NYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1012

Query: 307  ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             + Y  LI+  C    +     +L +M   G  PT   +  ++  L + G  ++      
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEK------ 1066

Query: 367  DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
                                G  FL      +M  R  + +   +N  I  LC      +
Sbjct: 1067 -------------------IGSLFL------EMRKRGFSPNVQIYNSVIDALCNCRSATQ 1101

Query: 426  AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
            A  +L +M  S   PD  T++  + G C   +   A    R+   + L  + +SY+ L+ 
Sbjct: 1102 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1161

Query: 486  GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            G C   ++  A ++   M   G +    +F  LI+GL V  KV +A+ +R          
Sbjct: 1162 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1221

Query: 546  TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              + Y  ++ GL K +       +L +ML +    D   Y  LI        L D    F
Sbjct: 1222 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1281

Query: 606  ---------------NVMVKA--------------------GLVPDRETMLSLLHGLADG 630
                           N M+K                     G +PD  T  +++ G A  
Sbjct: 1282 EFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1341

Query: 631  SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
              L+     +  ++      +   Y+ LING  K G T  A  L   M  +   P+  T+
Sbjct: 1342 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 1401

Query: 691  GLLVGS 696
             +L+GS
Sbjct: 1402 TILIGS 1407



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/418 (20%), Positives = 163/418 (38%), Gaps = 27/418 (6%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            T+  +I  L   G+V + E   +  ++      + +   L+  F     +  A  +LV M
Sbjct: 1120 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1179

Query: 158  NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
               G    V  F  ++  +V   +  ++ + V ++M +  + P+V+  N L+  L +   
Sbjct: 1180 MGRGHTPDVVTFGALIHGLVVAGK-VSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1238

Query: 218  IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            + +A +    M +K   P+   +  +I G I +  + D+  I   M   G+  ++     
Sbjct: 1239 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNA 1298

Query: 278  IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            +I   C+   + EAI     MR +  +PDE TY  +I+   +   L+ A   L DMI   
Sbjct: 1299 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1358

Query: 338  LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
              P    +  ++ G C+ G  D +     +      SP    +  L+       K   A 
Sbjct: 1359 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1418

Query: 394  CILEKMADRKIADCDSWNIPIRWL----------------CENEEIRKAYELL---GRMV 434
               E M    +  C   ++ + +L                C   E+     LL    ++V
Sbjct: 1419 LYFETML---LNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLV 1475

Query: 435  VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
                 P  + Y+A +   C+     +AL    +++ +  V + I++  L+ G C V K
Sbjct: 1476 FDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 122/279 (43%), Gaps = 14/279 (5%)

Query: 458  YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            ++DA +++ ++  +    D+ S   LV GLC   ++ E +++       GC      +N+
Sbjct: 959  WDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNV 1018

Query: 518  LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
            LI G C    + + + L     ++G   T  TY  ++  L K    + +  +  +M   G
Sbjct: 1019 LIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRG 1078

Query: 578  CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL---- 633
             + +V+ Y  +I ++          +    M  +G  PD  T  +L+ GL     +    
Sbjct: 1079 FSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 1138

Query: 634  HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT---- 689
            H +   I + ++ +++     Y  LI+G    G    AS LL  M+G+G  PD  T    
Sbjct: 1139 HFLREAIRRELNPNQL----SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1194

Query: 690  -HGLLVGSSVGEEIDSRRFAFDSSSFPD-SVSDILAEGL 726
             HGL+V   V E +  R    +   FPD ++ ++L  GL
Sbjct: 1195 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233


>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 229/527 (43%), Gaps = 57/527 (10%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           ++ L+P  +++V  N      AL +F    IQ      A  +  ++L     G V++   
Sbjct: 10  KYTLTP--VLQVYCNAGKFDEALNVFN--EIQDHGWLDAYVFSILVLSFSKWGQVDKSFE 65

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV 177
             + M ++ +    +   +L+  FV   RV+  +++   M   G    + +++V++G   
Sbjct: 66  FIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFC 125

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ-FRRMH------- 229
             K+     + +Y EM    I P++  ++ L+    E  ++   L++    M+       
Sbjct: 126 SNKK-LDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLL 184

Query: 230 --------------KKGCC-------------------------PNSRTFEIVIKGLIAN 250
                          K CC                         PN+ +F IVI GL+  
Sbjct: 185 CNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQA 244

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++D +V +  +M ++G   +L  Y  +I  LC  ++LEE+ +L K M      P + T 
Sbjct: 245 CKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTL 304

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +  CLC+   +  A D+++ M + G  P    +  +VR LC+ GK  E+  FL D   
Sbjct: 305 NSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQ 364

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRK 425
               P    ++ALL       +   A  + + ++ R +  D  ++NI ++ L E     +
Sbjct: 365 EGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEE 424

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L   MV+  ++P   TY+  + G CK    +DA+     +SA+    +  +Y+ L++
Sbjct: 425 ARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLID 484

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           GLC+  +  +AV ++  M + GC  +  +F   I+GLC   K + A+
Sbjct: 485 GLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAAL 531



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 130/602 (21%), Positives = 259/602 (43%), Gaps = 62/602 (10%)

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
           + N  + + A+ V   +   G+ L   VF++++ +  +  +    F F+ K M +     
Sbjct: 20  YCNAGKFDEALNVFNEIQDHGW-LDAYVFSILVLSFSKWGQVDKSFEFIEK-MEEQNFRL 77

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N  T   L+    + +R++  +  F +M K G  P+   ++++I G  +N ++D ++S+ 
Sbjct: 78  NEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLY 137

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKL----EEAIR----------------------- 293
            EM  L IQ ++   + +I     E KL    EE +                        
Sbjct: 138 AEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGL 197

Query: 294 --------------------LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
                                +K+ R   + P+  ++  +IN L +  +LD A  + +DM
Sbjct: 198 IDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDM 257

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPH--NALLECCCNAGKF 389
             IG      ++ +++ GLC   + +ES   L++  + G+  +    N++  C C     
Sbjct: 258 AEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDV 317

Query: 390 FLAKCILEKMADRKIADCDSW----NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
             A  +++KM   ++  C+ W     + +R LC++ +  +A   L  MV     P+   Y
Sbjct: 318 SGALDLVKKM---RLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAY 374

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           SA + G  ++   + AL++F+ +SA+    D I+Y+ L++GL +  +  EA  +F  M  
Sbjct: 375 SALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVM 434

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G   S  ++N+LI G C    +D A+       +        TYT ++ GL K  R  D
Sbjct: 435 KGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDD 494

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            +++  +M   GC  +  A+   I  + + +K +   + F+ M +  + PD    +SL+ 
Sbjct: 495 AVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVS 554

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI--NGLWKEGLTSQASYLLDLMLGKGW 683
              + S   +    + K+V      D    N +I  + + K    ++ S  +  ++  G 
Sbjct: 555 AFVNISNFPMAFEILKKMVDRRNFPDPLDKNCIIIRDAILKLSKDARTSSSVKSLIASGS 614

Query: 684 VP 685
           +P
Sbjct: 615 IP 616



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 213/493 (43%), Gaps = 58/493 (11%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           TL  +L+V     + + AL+ F  +   G   ++  F I++       +VD S   + +M
Sbjct: 12  TLTPVLQVYCNAGKFDEALNVFNEIQDHGWL-DAYVFSILVLSFSKWGQVDKSFEFIEKM 70

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            +   +L    +  +I    +++++++ ++LF  M+   L PD   Y+ LI   C N +L
Sbjct: 71  EEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKL 130

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF-DESVNFLED-KCGYVTSPHNALLE 381
           D A  +  +M ++ + P   V   ++    E GK  D     LED      T   N++L 
Sbjct: 131 DKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLS 190

Query: 382 CCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
              N+G    A C+L  M    + + D  ++  + L  +E+IR               P+
Sbjct: 191 SLVNSGLIDKACCLLRNM----MGNGDDDDVQYK-LFRDEKIR---------------PN 230

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
            A++S  + G  + C  + A+ +F+ ++      D + Y+ L+ GLC  +++ E+ ++  
Sbjct: 231 TASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLK 290

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M ++G   +  + N +   LC  + V  A                       L LVK  
Sbjct: 291 EMEESGFKPTQFTLNSIFGCLCKRQDVSGA-----------------------LDLVK-- 325

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
                     +M + GC   V+ Y +L++ + +  K  + ++F   MV+ G  P+     
Sbjct: 326 ----------KMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYS 375

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           +LL GL +  ++         + +     D   YNIL+ GL++   T +A  L + M+ K
Sbjct: 376 ALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMK 435

Query: 682 GWVPDATTHGLLV 694
           G +P   T+ LL+
Sbjct: 436 GLIPSVVTYNLLI 448



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 141/309 (45%), Gaps = 5/309 (1%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  +I  L  +  +EE   L + M +  +   +  L S+         V+GA+ ++  M 
Sbjct: 269 YNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMR 328

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
             G +  V  + +++  + +  +     +F+  +MV+ G  PN+   + LL  L E   +
Sbjct: 329 LYGCEPWVKHYTLLVRKLCKHGKAAEASIFL-TDMVQEGFPPNIIAYSALLGGLIEVQEV 387

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           + AL  F+ +  +G CP+   + I++KGL    R +++ ++  EM   G+   +  Y  +
Sbjct: 388 DQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLL 447

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I   C+   +++A+     M A +  P+  TY  LI+ LC+  R DDA  +  +M   G 
Sbjct: 448 IDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGC 507

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAKC 394
            P    F+  + GLC+  K + ++    +       P      +L+    N   F +A  
Sbjct: 508 RPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFE 567

Query: 395 ILEKMADRK 403
           IL+KM DR+
Sbjct: 568 ILKKMVDRR 576



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 93/470 (19%), Positives = 183/470 (38%), Gaps = 71/470 (15%)

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D G+       T ++ + C   K +EA+ +F  ++    + D   +  L+    +  +
Sbjct: 1   MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGWL-DAYVFSILVLSFSKWGQ 59

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLEC 382
           +D + + +E M        +  F +++ G  +  + D+ V        Y  SP       
Sbjct: 60  VDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSP------- 112

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
                                  D   +++ I   C N+++ KA  L   M +  + PD 
Sbjct: 113 -----------------------DISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDI 149

Query: 443 ATYSAFVLG---KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
              S  +     + KL +  +       +  Q+L+ +S+  S +  GL         ++ 
Sbjct: 150 GVVSKLISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGL---------IDK 200

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
            CC+ +N   + +   + + Y L      D+ IR             T++++ ++ GL++
Sbjct: 201 ACCLLRN--MMGNGDDDDVQYKLFR----DEKIRP-----------NTASFSIVINGLMQ 243

Query: 560 LQRAKDLLVVLAQMLVE-GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
             +  DL V L Q + E GC  D+  Y  LI  +   ++L++       M ++G  P + 
Sbjct: 244 ACKL-DLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQF 302

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS----SMYNILINGLWKEGLTSQASYL 674
           T+ S+   L     +    SG   LV    +         Y +L+  L K G  ++AS  
Sbjct: 303 TLNSIFGCLCKRQDV----SGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIF 358

Query: 675 LDLMLGKGWVPDATTHGLLVGSSVG-EEIDSRRFAFDSSSFPDSVSDILA 723
           L  M+ +G+ P+   +  L+G  +  +E+D     F   S      D++A
Sbjct: 359 LTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIA 408


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 151/667 (22%), Positives = 262/667 (39%), Gaps = 81/667 (12%)

Query: 80  LKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVF 139
           ++ F W   Q  + HT   Y  +   LG        E L + + ++    +R  L  LV 
Sbjct: 118 VRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVR 177

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV---VLGAIVEEKRGFADFVFVYKEMVKA 196
               H   + A+  L  +   G++ S   +N    VL +  + + GF     V KEM  +
Sbjct: 178 RCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFR----VQKEMSAS 233

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQ-------------------------------- 224
           G   +  T+ Y  + L +  R   AL+                                 
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSF 293

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             RM    C PN  T+  ++ G +   +      I+  M   G     S +  ++   C 
Sbjct: 294 LHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCN 353

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
                 A +LF  M      P  + Y   I  +C    L +A   L D++       + V
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAE--LLDLV-------EKV 404

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK- 403
           + +++   C + K + + NF                 C C  GKF  A  IL++M  +  
Sbjct: 405 YEEMLAASCVLNKVN-TANF---------------SRCLCGVGKFEKAFQILKEMMRKGF 448

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + D  ++   I +LC+ +++ K++ L   M  + V PD  TY+  +   CK    E A  
Sbjct: 449 VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARS 508

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
            F ++ +     + ++Y+ L+    + +++ +A ++F  M    C  ++ +++ LI GLC
Sbjct: 509 WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568

Query: 524 VMRKVDKAIR-----------LRSLAYSSGTSYTT-----STYTKIMLGLVKLQRAKDLL 567
              ++ KA             + S  Y  G    T      TY  ++ GL K Q+  D  
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +L  ML  GC  +   Y  LI    +  K+ +    F  M K G +P   T  SL+  +
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRM 688

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
               +L L    ++++++DS   +   Y  +I+GL K G   +A  LL LM  KG  P+ 
Sbjct: 689 FKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748

Query: 688 TTHGLLV 694
            T+  L+
Sbjct: 749 VTYTALI 755



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 251/561 (44%), Gaps = 29/561 (5%)

Query: 117 GLCQ---NMVKERYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           G C+   NM+     N   +L  SLV  + N      A ++   M + G       +N+ 
Sbjct: 323 GWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIF 382

Query: 173 LGAIV-EEKRGFADFV----FVYKEMVKAGIVPN-VDTLNYLLEVLFETNRIESALDQFR 226
           +G+I  +E+   A+ +     VY+EM+ A  V N V+T N+    L    + E A    +
Sbjct: 383 IGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFS-RCLCGVGKFEKAFQILK 441

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M +KG  P++ T+  VI  L    +V+ S  +  EM   G+  ++  YT +I   C+  
Sbjct: 442 EMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAG 501

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
            +E+A   F  MR++   P+ +TY  L++   ++ +L  A+DI   M+     P    + 
Sbjct: 502 LIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYS 561

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
            ++ GLC+ G+  ++    E   G   +  +           F+        +A   +  
Sbjct: 562 ALIDGLCKAGEIQKACEVYEKLIGTSGNVES----------DFYFEGNDTCTIAPNVV-- 609

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++   I  LC+ +++  A+ELL  M+ +   P+   Y A + G CK+   ++A  VF 
Sbjct: 610 --TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           +++    +    +Y+ L++ + +  ++  A++V   M  + C+ +  ++  +I GL  + 
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           +++KA+ L SL    G S    TYT ++ GL K  +A   L +  QM  +GCA +   Y 
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVS 645
           +LI        L +  L  + M         +     + G    S+  + S G + ++ S
Sbjct: 788 VLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF---SKKFIASLGLLEEMES 844

Query: 646 DSEVLDSSMYNILINGLWKEG 666
              V  + +Y +LI+   K G
Sbjct: 845 HETVPIAPVYGMLIDSFSKAG 865



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/502 (22%), Positives = 226/502 (45%), Gaps = 27/502 (5%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A ++L  M   GF      +  V+  + + K+    F+ +++EM +AG+ P+V T   L+
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL-LFQEMKRAGVNPDVYTYTILI 494

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +   +   IE A   F  M   GC PN  T+  ++   + + ++  +  I   M D    
Sbjct: 495 DSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACY 554

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALD----------------LMPDELTYEEL 313
                Y+ +I  LC+  ++++A  +++ +                    + P+ +TY  L
Sbjct: 555 PNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGAL 614

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD--ESVNFLEDKCGY 371
           I+ LC+  ++ DA+++L+ M+  G  P   V+  ++ G C++GK D  + V     KCGY
Sbjct: 615 IDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGY 674

Query: 372 VTSPHN--ALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
           + S H   +L++     G+  LA K + E + D    +  ++   I  L +  EI KA  
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALN 734

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL  M      P+  TY+A + G  K    + +L++F+Q++++    + ++Y  L+   C
Sbjct: 735 LLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCC 794

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
               + EA  +   M           ++  + G    +K   ++ L     S  T     
Sbjct: 795 AAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFS--KKFIASLGLLEEMESHETVPIAP 852

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA---YCILIQSMSEQNKLKDCALFF 605
            Y  ++    K  R +  L +  +++    +L++ +   Y  LIQ++   +++++    +
Sbjct: 853 VYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLY 912

Query: 606 NVMVKAGLVPDRETMLSLLHGL 627
             M + G+VPD    +SL+ GL
Sbjct: 913 TEMTRKGIVPDLIVFVSLVKGL 934



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 117/525 (22%), Positives = 220/525 (41%), Gaps = 30/525 (5%)

Query: 68  RVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY 127
           R L        A +I K + ++K F     TY K+I  L  A  VE+   L Q M +   
Sbjct: 425 RCLCGVGKFEKAFQILKEM-MRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGV 483

Query: 128 -PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
            P+V    I L+ SF     +  A      M S G   +V  +  +L A ++ K+     
Sbjct: 484 NPDVYTYTI-LIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ-LIQA 541

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-------------HKKGC 233
             ++  MV A   PN  T + L++ L +   I+ A + + ++                  
Sbjct: 542 HDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDT 601

Query: 234 C---PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           C   PN  T+  +I GL    +V D+  +L  M   G +     Y  +I   C+  K++ 
Sbjct: 602 CTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDN 661

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A  +F  M     +P   TY  LI+ + ++ RLD A  +L +M+     P    +  ++ 
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMID 721

Query: 351 GLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA- 405
           GL +VG+ ++++N L    E  C      + AL++     GK   +  + ++M  +  A 
Sbjct: 722 GLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAP 781

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           +  ++ + I   C    + +A+ LL  M  +        Y   V G  K   +  +L + 
Sbjct: 782 NYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLL 839

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS---FNILIYGL 522
            ++ +   V  +  Y  L++   +  ++  A+E+   + +   SL+ +S   +  LI  L
Sbjct: 840 EEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQAL 899

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C+  +V++A  L +     G       +  ++ GL+++ +  + L
Sbjct: 900 CLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEAL 944



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 160/339 (47%), Gaps = 11/339 (3%)

Query: 171 VVLGAIVE---EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V  GA+++   + +  +D   +   M+ AG  PN    + L++   +  +I++A + F R
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR 668

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M K G  P+  T+  +I  +  + R+D ++ +L EM +      +  YT +I  L +  +
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E+A+ L  +M      P+ +TY  LI+ L +  + D +  + + M   G  P    +  
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAG---KFFLAKCILEKMADRK- 403
           ++   C  G  DE+ + L D+  +   P +     C   G   KF  +  +LE+M   + 
Sbjct: 789 LINHCCAAGLLDEA-HLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHET 847

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMV-VSSVVPDCAT--YSAFVLGKCKLCNYED 460
           +     + + I    +   +  A EL   +V VSS +   +T  Y++ +   C     E+
Sbjct: 848 VPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEE 907

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           A  ++ +++ + +V D I +  LV+GL +V K  EA+++
Sbjct: 908 AFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 129/311 (41%), Gaps = 48/311 (15%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D +CK+       G ++  + +   M K  Y        SL+       R++ AM+VL  
Sbjct: 651 DGFCKI-------GKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE 703

Query: 157 MNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           M +     +V  +  ++  +  V E     + + + +E    G  PNV T   L++ L +
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE---KGCSPNVVTYTALIDGLGK 760

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           T + +++L  F++M+ KGC PN  T+ ++I    A   +D++  +L EM        L  
Sbjct: 761 TGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQG 820

Query: 275 YTC---------------------------------IIPMLCRENKLEEAIRLFKMMRAL 301
           Y C                                 +I    +  +LE A+ L K +  +
Sbjct: 821 YHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEV 880

Query: 302 DL---MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                M     Y  LI  LC   ++++A  +  +M   G+ P   VFV +V+GL EV K+
Sbjct: 881 SSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKW 940

Query: 359 DESVNFLEDKC 369
           DE++     +C
Sbjct: 941 DEALQLCYGRC 951



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 3/219 (1%)

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           LV   C+     EA+E    +   G   S+ ++N L+  L    +V+   R++    +SG
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                ST       L K+ R  D L +L +   E   LD      +I  + E +   +  
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNEAM 291

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
            F + M     +P+  T  +LL G     Q       IN ++++    + S++N L++G 
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGY 351

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
              G  + A  L + M   G  P    + + +GS  G+E
Sbjct: 352 CNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQE 390



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/327 (19%), Positives = 126/327 (38%), Gaps = 10/327 (3%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+  CC  G +  A   L ++ D        ++N  ++ L    ++   + +   M  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S    D +T   F    CK+  + DAL +  +   +   LD++  ++++ GL +     E
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNE 289

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+     M  N C  +  ++  L+ G    ++     R+ ++  + G +   S +  ++ 
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF------FNVMV 609
           G            +  +M   G      AY I I S+  Q +L +  L       +  M+
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            A  V ++    +    L    +       + +++    V D+S Y  +I  L +     
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS 696
           ++  L   M   G  PD  T+ +L+ S
Sbjct: 470 KSFLLFQEMKRAGVNPDVYTYTILIDS 496


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 206/434 (47%), Gaps = 37/434 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +L +I + K  ++  + +  +M   GI P+V TLN L+       R+  A     ++
Sbjct: 115 FTKLLTSIAKMKH-YSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL 173

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K GC P++ TF  +I+GL    ++ +++ +  +    G Q ++  Y  ++  LC+    
Sbjct: 174 LKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNT 233

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AIRL + M   +  P+ + Y  +I+ LC++ ++ +A ++  +MI  G++P  D+F   
Sbjct: 234 SAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP--DIFT-- 289

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                      +N+L+   CN  ++     +L +M + KI  + 
Sbjct: 290 ---------------------------YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 322

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
             ++  +  LC+   I  A++++  M+   V PD  TY+A + G C     ++A++VF  
Sbjct: 323 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 382

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +  V +  SY+ L+ G CQ++++ +A+ +   MS  G    + ++N LI+GLC + +
Sbjct: 383 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 442

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE--AY 585
           +  AI L     +SG      TY  ++  L K     + +V+L    +EG  LD +   Y
Sbjct: 443 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA--IEGSNLDADILVY 500

Query: 586 CILIQSMSEQNKLK 599
            I I  M    +L+
Sbjct: 501 NIAIDGMCRAGELE 514



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 196/442 (44%), Gaps = 17/442 (3%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD++S    M  +        +T ++  + +       + L   M +  + PD  T   
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN  C   RL  A  +L  ++ +G  P +  F  ++RGLC  GK  E+++  +   G  
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    +  L+   C  G    A  +L  M  +    +  ++N  I  LC++ ++ +A+
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L   M+   + PD  TY++ +   C LC ++    +  ++    ++ + + +S +V+ L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+   I  A +V   M K G      ++  L+ G C+  ++D+A+++       G     
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +Y  ++ G  ++QR    + +L QM ++G   D   Y  LI  +    +L+     F+ 
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 608 MVKAGLVPDRETMLSLL------HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
           MV +G +PD  T   LL      H LA+   L     G N    D+++L   +YNI I+G
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL---DADIL---VYNIAIDG 506

Query: 662 LWKEGLTSQASYLLDLMLGKGW 683
           + + G    A  L   +  +G+
Sbjct: 507 MCRAGELEAARDLFSNLSCQGF 528



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 142/291 (48%), Gaps = 1/291 (0%)

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           RM+     P    ++  +    K+ +Y   L +  Q+ +  +  D  + + L+   C + 
Sbjct: 102 RMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 161

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++  A  V   + K GC   +++FN LI GLCV  K+ +A+ L       G      TY 
Sbjct: 162 RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYG 221

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +M GL K+      + +L  M+ + C  +V AY  +I S+ +  ++ +    F+ M+  
Sbjct: 222 TLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK 281

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+ PD  T  SL+H L +  +   V++ +N++V+   + +  +++ +++ L KEG+ + A
Sbjct: 282 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 341

Query: 672 SYLLDLMLGKGWVPDATTH-GLLVGSSVGEEIDSRRFAFDSSSFPDSVSDI 721
             ++D+M+ +G  PD  T+  L+ G  +  E+D     FD+      V ++
Sbjct: 342 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 132/290 (45%)

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  + NI I   C    +  A+ +L +++     PD  T++  + G C      +AL +
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 204

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F +   +    D ++Y  L+ GLC+V   + A+ +   M +  C  +  ++N +I  LC 
Sbjct: 205 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 264

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
            R+V +A  L S   + G S    TY  ++  L  L   K +  +L +M+      +V  
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           +  ++ ++ ++  +       ++M+K G+ PD  T  +L+ G    S++       + +V
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               V +   YNILING  +     +A  LL+ M  +G + D  T+  L+
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 434



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 73/147 (49%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+  MV  G VPNV + N L+    +  R++ A+    +M  +G   ++ T+  +I G
Sbjct: 377 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+  ++++  EM   G   +L  Y  ++  LC+ + L EA+ L K +   +L  D
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 496

Query: 307 ELTYEELINCLCENLRLDDANDILEDM 333
            L Y   I+ +C    L+ A D+  ++
Sbjct: 497 ILVYNIAIDGMCRAGELEAARDLFSNL 523


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 155/668 (23%), Positives = 278/668 (41%), Gaps = 50/668 (7%)

Query: 41  MIKSHQTTD-YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTY 99
           ++K+HQ  D  E++    +  +S D    V+D  +D   ALK F W S  + F  + D  
Sbjct: 35  ILKTHQWQDSLESRFAESKVVVS-DVAHFVIDRVHDAELALKFFDWAST-RPFSCSLDGV 92

Query: 100 CK-MILKLGLAGNV-EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
               +LKL  +  V  E+E + +NM  +     REA  +L+ ++                
Sbjct: 93  AHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAY---------------G 137

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            SG    ++ +F+ V                  +EM     +P V   N LL  L ++ +
Sbjct: 138 ESGSLDRALQLFHTV------------------REM--HNCLPTVVASNSLLNGLVKSGK 177

Query: 218 IESALDQFRRMHK----KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           ++ AL  + +M +     G   ++ T  IV+KGL    ++++   ++ + +  G    + 
Sbjct: 178 VDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVV 237

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           FY  II   C++  L+ A R  K ++   ++P   TY  LIN  C+    +  + +L +M
Sbjct: 238 FYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM 297

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKF 389
              GL     VF +++    + G   ++   +    E  CG   + +N ++   C  G+ 
Sbjct: 298 AARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRI 357

Query: 390 FLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A   LEK  +R  + +  S+   +   C+  +  KA  +L R+      PD  +Y AF
Sbjct: 358 KEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAF 417

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G       + AL V  ++  + +  D+  Y+ L+ GLC+  +      +   M     
Sbjct: 418 IHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNV 477

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                 F  L+ G     ++D+AI++  +    G       Y  ++ G  K  +  D L 
Sbjct: 478 QPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALS 537

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            L +M     A D   Y  +I    +Q+ +      F  M+K    P+  T  SL++G  
Sbjct: 538 CLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFC 597

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP-DA 687
             + +         + S   V +   Y  L+ G +K G   +A+ + +LML  G  P DA
Sbjct: 598 KKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDA 657

Query: 688 TTHGLLVG 695
           T H L+ G
Sbjct: 658 TFHYLING 665



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 136/634 (21%), Positives = 261/634 (41%), Gaps = 82/634 (12%)

Query: 97  DTYCKMILKLGLA--GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG----A 150
           D Y   I+  GL   G +EE     + +VK+R+       +      ++ Y   G    A
Sbjct: 200 DNYTTSIVVKGLCNLGKIEE----GRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCA 255

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
            R L  +   G   +V+ +  ++    +    F     +  EM   G+  NV   N +++
Sbjct: 256 TRTLKELKMKGVLPTVETYGALINGFCKAGE-FEAVDQLLTEMAARGLNMNVKVFNNVID 314

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI---------------------KGLIA 249
             F+   +  A +  RRM + GC P+  T+  +I                     +GL+ 
Sbjct: 315 AEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLP 374

Query: 250 NS-----------RVDDSVSILGEMF---DLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N            +  D V   G +F   ++G + +L  Y   I  +    +++ A+ + 
Sbjct: 375 NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVR 434

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           + M    + PD   Y  L++ LC+N R      +L +M+   + P   VF  ++ G    
Sbjct: 435 EKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRN 494

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMAD-RKIADCDSW 410
           G+ DE++   +        P    +NA+++  C  GK   A   L KM +     D  ++
Sbjct: 495 GELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTY 554

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           +  I    +  ++  A ++ G+M+     P+  TY++ + G CK  +   A +VFR + +
Sbjct: 555 STVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKS 614

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
             LV + ++Y+ LV G  +  K  +A  +F  M  NGC  + ++F+ LI GL        
Sbjct: 615 FDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLT------- 667

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV-VLAQMLVEGCALDVEAYCILI 589
                           T+T   ++     ++  + L++     ML EG    + AY  +I
Sbjct: 668 ---------------NTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVI 712

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVS 645
             + +   +    L    M+  G + D     ++LHGL    +     +++S  +NK+  
Sbjct: 713 VCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKI-- 770

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             E+  +  Y++ ++    +G  S+AS +L  ++
Sbjct: 771 --ELQTAVKYSLTLDKYLYQGRLSEASVILQTLI 802



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/529 (20%), Positives = 202/529 (38%), Gaps = 76/529 (14%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF---RRMHKKGCCPNS 237
           R F +   V + M    + P  +  + L+    E+  ++ AL  F   R MH   C P  
Sbjct: 105 RVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHN--CLPTV 162

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMF--DLGIQLELSFYTC--IIPMLCRENKLEEAIR 293
                ++ GL+ + +VD ++ +  +M   D G    +  YT   ++  LC   K+EE  R
Sbjct: 163 VASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRR 222

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L K       +P  + Y  +I+  C+   L  A   L+++ + G+ PT + +  ++ G C
Sbjct: 223 LVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFC 282

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
           +                               AG+F     +L +MA R +  +   +N 
Sbjct: 283 K-------------------------------AGEFEAVDQLLTEMAARGLNMNVKVFNN 311

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I    +   + KA E + RM      PD  TY+  +   CK    ++A     +   + 
Sbjct: 312 VIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERG 371

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L+ +  SY+ L+   C+     +A  +   +++ G      S+   I+G+ V  ++D A+
Sbjct: 372 LLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVAL 431

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            +R      G       Y  +M GL K  R   + ++L++ML      DV  +  L+   
Sbjct: 432 MVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGF 491

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
               +L +    F V+++ G+ P          G+                         
Sbjct: 492 IRNGELDEAIKIFKVIIRKGVDP----------GIVG----------------------- 518

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             YN +I G  K G  + A   L+ M      PD  T+  ++   V + 
Sbjct: 519 --YNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQH 565


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 32/345 (9%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           ++ G+   + +  EM   G  P++ T N ++  + +  R++ A++  + +   GC PN+ 
Sbjct: 4   KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++ IV+KGL    R +D+  ++GEM   G    +  +  +I  LCR+  +E A+ + + +
Sbjct: 64  SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 P+ L+Y  L++  C+  ++D A   L+ M+  G  P      DIV         
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP------DIVS-------- 169

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWL 417
                            +N LL   C +G+  +A  +L ++ D+  A    S+N  I  L
Sbjct: 170 -----------------YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 212

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            +  + ++A ELL  MV   + PD  TYS    G C+    EDA+R F +V    +  ++
Sbjct: 213 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 272

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           + Y+ ++ GLC+  +   A+++F  M  NGC  + S++ ILI GL
Sbjct: 273 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 317



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 160/367 (43%), Gaps = 30/367 (8%)

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C+      A  +L++M   G TP    +  +V G+C+ G+ D+++ FL++   Y   P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                                          S+NI ++ LC  E    A EL+G M    
Sbjct: 63  V------------------------------SYNIVLKGLCTAERWEDAEELMGEMGQKG 92

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P+  T++  +   C+    E AL V  Q+       +S+SY+ L+   C+ +K+ +A+
Sbjct: 93  CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 152

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
                M   GC     S+N L+  LC   +VD A+ L       G +    +Y  ++ GL
Sbjct: 153 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 212

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K  + K+ L +L +M+ +G   D+  Y  +   +  +++++D    F  +   G+ P+ 
Sbjct: 213 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 272

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
               +++ GL    + H        ++ +  + + S Y ILI GL  EGL  +A  LLD 
Sbjct: 273 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 332

Query: 678 MLGKGWV 684
           +  +G V
Sbjct: 333 LCSRGVV 339



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 156/325 (48%), Gaps = 8/325 (2%)

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
           S    ++ +L EM D G   ++  Y  ++  +C+E ++++AI   K + +    P+ ++Y
Sbjct: 6   SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 65

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             ++  LC   R +DA +++ +M   G  P    F  ++  LC  G  + ++  LE    
Sbjct: 66  NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 125

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRK 425
           Y  +P    +N LL   C   K   A   L+ M  R    D  S+N  +  LC + E+  
Sbjct: 126 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 185

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A ELL ++      P   +Y+  + G  K    ++AL +  ++ ++ L  D I+YS +  
Sbjct: 186 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 245

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC+ ++I +A+  F  +   G   ++  +N +I GLC  R+   AI L +    +G   
Sbjct: 246 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 305

Query: 546 TTSTYTKIMLGLVK---LQRAKDLL 567
             STYT ++ GL     ++ A+DLL
Sbjct: 306 NESTYTILIEGLAYEGLIKEARDLL 330



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 156/337 (46%), Gaps = 5/337 (1%)

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C+ +  ++A++L   MR     PD +TY  ++N +C+  R+DDA + L+++   G  P  
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEK 398
             +  +++GLC   +++++   + +       P+    N L+   C  G    A  +LE+
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 399 MADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           +       +  S+N  +   C+ +++ KA   L  MV     PD  +Y+  +   C+   
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A+ +  Q+  +      ISY+ +++GL +  K  EA+E+   M   G      +++ 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           +  GLC   +++ AIR        G    T  Y  I+LGL K +     + + A M+  G
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
           C  +   Y ILI+ ++ +  +K+     + +   G+V
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 147/312 (47%), Gaps = 1/312 (0%)

Query: 384 CNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C    +  A  +L++M D+    D  ++N+ +  +C+   +  A E L  +      P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            +Y+  + G C    +EDA  +  ++  +    + ++++ L+  LC+   +  A+EV   
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           + K GC+ +S S+N L++  C  +K+DKA+    L  S G      +Y  ++  L +   
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
               + +L Q+  +GCA  + +Y  +I  +++  K K+     N MV  GL PD  T  +
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           +  GL    ++        K+       ++ +YN +I GL K   T  A  L   M+G G
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 683 WVPDATTHGLLV 694
            +P+ +T+ +L+
Sbjct: 303 CMPNESTYTILI 314



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 147/351 (41%), Gaps = 31/351 (8%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           AM++L  M   G    +  +NVV+  I +E R   D +   K +   G  PN  + N +L
Sbjct: 11  AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR-VDDAIEFLKNLPSYGCEPNTVSYNIVL 69

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           + L    R E A +    M +KGC PN  TF ++I  L     V+ ++ +L ++   G  
Sbjct: 70  KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 129

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
                Y  ++   C++ K+++A+    +M +    PD ++Y  L+  LC +  +D A ++
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
           L  +   G  P    +  ++ GL + GK  E++  L +       P              
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP-------------- 235

Query: 390 FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
                           D  +++     LC  + I  A    G++    + P+   Y+A +
Sbjct: 236 ----------------DIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 279

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           LG CK      A+ +F  +     + +  +Y+ L+EGL     I EA ++ 
Sbjct: 280 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 330



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 4/243 (1%)

Query: 128 PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           PNV     +++ SF+     V  A+ VL  +   G   +   +N +L A  ++K+     
Sbjct: 95  PNV--VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 152

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            F+   MV  G  P++ + N LL  L  +  ++ A++   ++  KGC P   ++  VI G
Sbjct: 153 AFL-DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 211

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    +  +++ +L EM   G+Q ++  Y+ I   LCRE+++E+AIR F  ++ + + P+
Sbjct: 212 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 271

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            + Y  +I  LC+      A D+   MI  G  P +  +  ++ GL   G   E+ + L+
Sbjct: 272 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 331

Query: 367 DKC 369
           + C
Sbjct: 332 ELC 334



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 3/204 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF-VFVYKEMV 194
            L+ +F    +++ AM  L  M S G    +  +N +L A+   + G  D  V +  ++ 
Sbjct: 137 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC--RSGEVDVAVELLHQLK 194

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G  P + + N +++ L +  + + AL+    M  KG  P+  T+  +  GL    R++
Sbjct: 195 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 254

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D++   G++ D+GI+     Y  II  LC+  +   AI LF  M     MP+E TY  LI
Sbjct: 255 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 314

Query: 315 NCLCENLRLDDANDILEDMIVIGL 338
             L     + +A D+L+++   G+
Sbjct: 315 EGLAYEGLIKEARDLLDELCSRGV 338



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/161 (19%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           K  + +L +M  +GC  D+  Y +++  + ++ ++ D   F   +   G  P+  +   +
Sbjct: 9   KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           L GL    +       + ++       +   +N+LI+ L ++GL   A  +L+ +   G 
Sbjct: 69  LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128

Query: 684 VPDATTHGLLVGSSVGEEIDSRRFAF-----DSSSFPDSVS 719
            P++ ++  L+ +   ++   +  AF         +PD VS
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 169


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 231/532 (43%), Gaps = 22/532 (4%)

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           AG VPN    N L++       +   +     M  KG  P   T+  ++  L     ++ 
Sbjct: 288 AGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEK 347

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             S+L EM +  +   +  Y  +I  LC+     +A+ + K M A    PD +T+  LI+
Sbjct: 348 IASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLIS 407

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+  R+ +A  +L +     L P    +  ++ G C  G+   + N L +      +P
Sbjct: 408 GLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTP 467

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
                 AL+     AG+   A  + EKMA R++  D + +N+ I  LC+ + +  A  L+
Sbjct: 468 DVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLI 527

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+  +V PD   Y+  + G  +  + ++A ++F  +  + +  D + Y+ +++G CQ 
Sbjct: 528 EEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQF 587

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             + EAVE    M K G      ++  LI G      +  A+ L               Y
Sbjct: 588 GMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAY 647

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           + ++ G  KL        +   M  +G   +V  Y ILI S+ +++K+   A++F  M+ 
Sbjct: 648 SSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLL 707

Query: 611 AGLVPDRETMLSLLHGLADG----------SQLHLVSSG-----INKLVSDSEVLDSSMY 655
               P+  T+ SL+ GL +           S ++L   G        LV+D     +S Y
Sbjct: 708 NQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAY 767

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG-SSVGEEIDSR 705
           N +I  L    +  +A  L + M  KG+ PD+ T   LL G  SVG+  + R
Sbjct: 768 NAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWR 819



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 128/533 (24%), Positives = 224/533 (42%), Gaps = 51/533 (9%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           T  TY  ++  LG  G++E++  L   M + R P   +   S++ +       + A+ VL
Sbjct: 328 TVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVL 387

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M +GG       F+ ++  + +E R   +   + +E  +  + PN+ +   L+     
Sbjct: 388 KQMFAGGCDPDAITFSTLISGLCQEGR-VQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              +  A +    M ++G  P+  TF  +I GL+   +V +++ +  +M    +  + + 
Sbjct: 447 RGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI 506

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I  LC++  L  A  L + M   ++ PD+  Y  LI+    N  LD+A  I E M 
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
             G+ P    +  +++G C+ G  +E+V                  EC     K      
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAV------------------ECMSTMRKVG---- 604

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                   +I D  ++   I    +   I  A  LL  M+     P+   YS+ + G CK
Sbjct: 605 --------RIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCK 656

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + + A  +F  + +Q L  + I+Y+ L+  L + +K+  A   F  M  N CS +  +
Sbjct: 657 LGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYT 716

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
            + L+ GLC            S+A S  +S+ +ST        V L     LL +   ++
Sbjct: 717 LHSLVTGLC-----------NSMA-SIISSHCSST--------VNLHGKGALLDIFRALV 756

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            + C     AY  +I S+   N L +     N M   G  PD  T LSLL+G 
Sbjct: 757 NDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGF 809



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/423 (20%), Positives = 169/423 (39%), Gaps = 33/423 (7%)

Query: 274 FYTCI-IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
           + TC+ +  LC E  +E+ ++L +       +P+ + Y  LI+  C    +     +L +
Sbjct: 260 YSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGE 319

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           M   GL PT   +  ++  L   G  ++  +                             
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIAS----------------------------- 350

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +L +M +R++  +   +N  I  LC+     +A  +L +M      PD  T+S  + G
Sbjct: 351 --LLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISG 408

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+    ++A R+ R+ +   L  +  SY+ L+ G C   ++  A  +   M + G +  
Sbjct: 409 LCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPD 468

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             +F  LI+GL V  +V +A+ +R    +       + Y  ++ GL K +       ++ 
Sbjct: 469 VVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIE 528

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +ML +    D   Y  LI        L +    F  M + G+ PD     +++ G     
Sbjct: 529 EMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFG 588

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            ++     ++ +     + D   Y  LI G  K+G  S A  LL  M+ +   P+   + 
Sbjct: 589 MMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYS 648

Query: 692 LLV 694
            L+
Sbjct: 649 SLI 651


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 225/478 (47%), Gaps = 24/478 (5%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK-LGLAGNVEEME 116
           R     +  +R L    +L  AL++    SI    +  A   C +++K L   G V + E
Sbjct: 59  RSGGGANRRLRGLVQRGELDGALRLVH--SISGSGKDPAVIPCNILIKKLCADGRVADAE 116

Query: 117 GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGA 175
                +V+   P+   A I    + VN Y   G +     M +S  F      +N ++ A
Sbjct: 117 ----RVVEALGPS---ATIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRA 169

Query: 176 IVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
           +    RG   D + V+ +M+  G  P+V T + LL+   + +  + A+     M  KGC 
Sbjct: 170 LC--VRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCE 227

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+  T+ ++I  + +   V +++ +L  +   G + +   YT ++  LC   + EEA +L
Sbjct: 228 PDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKL 287

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M + D  PDE+T+  +I  LC+   +  A  +L  M   G TP    +  I+ GLC+
Sbjct: 288 LTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCK 347

Query: 355 VGKFDESVNFLEDKCGYVTSPH--------NALLECCCNAGKFFLAKCILEKMADRK-IA 405
             + DE++  L++    + S +        N ++   C  G F  A  ++++M++   I 
Sbjct: 348 ERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIP 407

Query: 406 DCDSWN-IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
           D  ++N I   +LC++ +  +A +LL  MV + + PD  TY +   G  +    E A+ +
Sbjct: 408 DITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGM 467

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           FR+V A  L  D + Y+ ++ GLC+  +   A++ F  M  NGC    S++ IL+ G+
Sbjct: 468 FRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGI 525



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 211/480 (43%), Gaps = 16/480 (3%)

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N  L  L +   ++ AL     +   G  P      I+IK L A+ RV D+  ++     
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEA--- 121

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           LG    +  Y  ++   CR   ++ A R   M+ ++   PD  TY  LI  LC    + D
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARR---MIDSVPFAPDTFTYNPLIRALCVRGCVLD 178

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A  + +DM+  G +P+   +  ++   C+   + ++V  L++       P    +N L+ 
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C+ G    A  +L  +       D  ++   ++ LC +E   +A +LL +M  +   P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV--- 497
           D  T++A +   C+      A +V  Q+S      D I+YS +++GLC+  ++ EA+   
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 498 -EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            E+   M    C     +FN +I  LC     D+AI++       G     +TY  I+ G
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 557 -LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            L K  + ++ L +L  M+  G   D   Y  L   +S +++++     F  +   GL P
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D+    ++L GL    +  L       +VS+  + D S Y IL+ G+  EG   +A  LL
Sbjct: 479 DKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/472 (23%), Positives = 221/472 (46%), Gaps = 19/472 (4%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
             V    ++GA+R++ +++  G   +V   N+++  +  + R  AD   V + +   G  
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGR-VADAERVVEAL---GPS 125

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
             + T N ++        I++A    RRM       P++ T+  +I+ L     V D+++
Sbjct: 126 ATIITYNTMVNGYCRAGNIDAA----RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +  +M   G    +  Y+ ++   C+E+  ++A+ L   MR+    PD +TY  LIN +C
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTS 374
               + +A  +L  +   G  P    +  +++ LC   +++E+   L     + C     
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCE----NEEIRKAYEL 429
             NA++   C  G    A  +L +M++     D  +++  +  LC+    +E I+   EL
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG-LC 488
           L  MV  + +PD  T++  +   C+   ++ A++V  ++S    + D  +Y+ +V+G LC
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  K  EA+++   M  NG    ++++  L +GL    ++++AI +     + G S    
Sbjct: 422 KSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKM 481

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            Y  I+LGL K  R    +   A M+  GC  D   Y IL++ ++ +  L++
Sbjct: 482 LYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEE 533



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 191/460 (41%), Gaps = 55/460 (11%)

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           L +  +L+ A+RL   +      P  +    LI  LC + R+ DA  ++E    +G + T
Sbjct: 71  LVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVE---ALGPSAT 127

Query: 342 DDVFVDIVRGLCEVGKFD------ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
              +  +V G C  G  D      +SV F  D     T  +N L+   C  G    A  +
Sbjct: 128 IITYNTMVNGYCRAGNIDAARRMIDSVPFAPD-----TFTYNPLIRALCVRGCVLDALAV 182

Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            + M  R  +    +++I +   C+    ++A  LL  M      PD  TY+  +   C 
Sbjct: 183 FDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCS 242

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             +  +AL+V   + +     D+++Y+ +++ LC  E+  EA ++   M  N C+    +
Sbjct: 243 QGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVT 302

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           FN +I  LC    V +A ++ +     G +    TY+ IM GL K +R  + + +L ++L
Sbjct: 303 FNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELL 362

Query: 575 VE---------------------------------------GCALDVEAY-CILIQSMSE 594
            E                                       GC  D+  Y CI+   + +
Sbjct: 363 AEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCK 422

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             K ++     N+MV  GL PD  T  SL  GL+   ++        ++ +     D  +
Sbjct: 423 SCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKML 482

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           YN ++ GL K+  T  A      M+  G +PD +T+ +LV
Sbjct: 483 YNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILV 522



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 86/167 (51%), Gaps = 2/167 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE-VLFETNRIESALDQFR 226
            FN ++ ++ + K  F   + V  EM + G +P++ T N +++  L ++ + E ALD   
Sbjct: 376 TFNTIITSLCQ-KGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLN 434

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M   G CP++ T++ +  GL     ++ ++ +   +  +G+  +   Y  I+  LC++ 
Sbjct: 435 LMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKW 494

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           + + AI  F  M +   MPDE TY  L+  +     L++A ++L ++
Sbjct: 495 RTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 214/471 (45%), Gaps = 35/471 (7%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M + G+  +V+ FN+++ A+  E +   + ++V   M+K  I PNV T N +++   +  
Sbjct: 205 MIASGYSENVNTFNLIIYALCNECK-LLEAIYVVYLMLKIEIWPNVVTFNMIIDKANKMG 263

Query: 217 RIESALDQFRR---MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
            ++ AL   R    +      PN   +  +I G     R++ + ++LGEM  LGI     
Sbjct: 264 EMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNER 323

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I    R+  L+ A RL   M  + L+PD   Y  LI  L     L++A+ +L DM
Sbjct: 324 TYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDM 383

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
           I   + P +  +  + +GLC  G  ++++                            +  
Sbjct: 384 INRRILPDEFTYSILTKGLCVSGHLNKALR---------------------------VHY 416

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            I+E+   R   D  ++NI I ++ ++  I  A +LL  M+V  + PD  TY   V G C
Sbjct: 417 YIVERSLVR---DAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHC 473

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    E A++++ +        + + Y+ +++GLC+   I  A  +   + +NG  L   
Sbjct: 474 KEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQQNGF-LDPV 532

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N L++G CV  +++KA  L     + G+     +Y  ++  L K+   +  + ++  M
Sbjct: 533 TYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAM 592

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
             +G   D+  Y  LI +  E    KD     + MV  G VPDR+T  S +
Sbjct: 593 SSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPDRKTYRSFV 643



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 141/652 (21%), Positives = 254/652 (38%), Gaps = 120/652 (18%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
            ++R   N+  L  AL+ + WV  +  F H+ ++ C ++  L  + N  +   + ++++ 
Sbjct: 63  RVVREFRNSPQL--ALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLIL 120

Query: 125 ERYPNVREALISLVFS----------FVNHYR-------VNGAMRVLVNMNSGGFKLSVD 167
               +  E L  L+ S          F    R       V GA  V+  +   GF +++ 
Sbjct: 121 XNGKSPLEVLGGLMNSYEICNSNPAVFXARVRTCTQLRSVEGAYDVIRKLRLEGFWVTIH 180

Query: 168 VFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
            +N      +  K G  D F  +YKEM+ +G   NV+T N ++  L    ++  A+    
Sbjct: 181 AWNNF--LNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVY 238

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M K    PN  TF ++I          D  + +GEM DL ++L                
Sbjct: 239 LMLKIEIWPNVVTFNMII----------DKANKMGEM-DLALKLT--------------- 272

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
                 R  +++    + P+ + Y  +IN  C+  RL+ A ++L +MI +G+   +  + 
Sbjct: 273 ------RNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYA 326

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
            ++ G    G  D +    +                              E +  R I D
Sbjct: 327 TLIDGYARKGSLDVAFRLCD------------------------------EMVEMRLIPD 356

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
              +N  I WL    E+ +A  LL  M+   ++PD  TYS    G C   +   ALRV  
Sbjct: 357 TFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHY 416

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            +  +SLV D+ +Y+ L+  + Q   I  A ++   M   G      ++   + G C   
Sbjct: 417 YIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEG 476

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K++ A+++      +        Y  I+ GL K                           
Sbjct: 477 KIEAAVQIYDKTVKADGKSNLVVYNSILDGLCK--------------------------- 509

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
                   Q  +    L  + + + G + D  T  +LLHG     ++    +   ++++ 
Sbjct: 510 --------QGSIYAAKLLVDKLQQNGFL-DPVTYNTLLHGFCVNGEIEKAFALFLEMINV 560

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
             +++   YNI+I+ L K GL  QA  L+  M  +G +PD  T+  L+ + V
Sbjct: 561 GSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFV 612



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 142/375 (37%), Gaps = 79/375 (21%)

Query: 192 EMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           E++  G V PN+   N ++    +  R+ESA +    M K G   N RT+  +I G    
Sbjct: 276 EVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARK 335

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             +D +  +  EM ++ +  +   Y  +I  L  E +LEEA  L   M    ++PDE TY
Sbjct: 336 GSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTY 395

Query: 311 EELINCLCENLRLDDA-----------------------------------NDILEDMIV 335
             L   LC +  L+ A                                     +L  MIV
Sbjct: 396 SILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIV 455

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKF 389
            G+ P    +   V G C+ GK + +V   +       K   V   +N++L+  C  G  
Sbjct: 456 GGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVV--YNSILDGLCKQGSI 513

Query: 390 FLAKCILEKMADRKIAD-----------------------------------CDSWNIPI 414
           + AK +++K+      D                                     S+NI I
Sbjct: 514 YAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMI 573

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
            +LC+   I++A EL+  M    ++PD  TY+  +    ++C  +D + +   +  +  V
Sbjct: 574 HFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAV 633

Query: 475 LDSISYSKLVEGLCQ 489
            D  +Y   V    Q
Sbjct: 634 PDRKTYRSFVSPCLQ 648



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/486 (19%), Positives = 176/486 (36%), Gaps = 97/486 (19%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +E A D  R++  +G       +   +  L+     D   ++  EM   G    ++ +  
Sbjct: 160 VEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNL 219

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II  LC E KL EAI +  +M  +++ P+ +T+         N+ +D AN + E  + + 
Sbjct: 220 IIYALCNECKLLEAIYVVYLMLKIEIWPNVVTF---------NMIIDKANKMGEMDLALK 270

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           LT   +V                         G   SP+     C  N            
Sbjct: 271 LTRNTEVI-----------------------SGGSVSPNIVAYNCIING----------- 296

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                               C+   +  A  +LG M+   +  +  TY+  + G  +  +
Sbjct: 297 -------------------FCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGS 337

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A R+  ++    L+ D+  Y+ L+  L    ++ EA  +   M          +++I
Sbjct: 338 LDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSI 397

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L  GLCV   ++KA+R+               Y  +   LV+                  
Sbjct: 398 LTKGLCVSGHLNKALRVH--------------YYIVERSLVR------------------ 425

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              D   Y ILI  M +   +       + M+  G+ PD  T  + + G     ++    
Sbjct: 426 ---DAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAV 482

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
              +K V      +  +YN +++GL K+G    A  L+D +   G++   T + LL G  
Sbjct: 483 QIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFC 542

Query: 698 VGEEID 703
           V  EI+
Sbjct: 543 VNGEIE 548


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 150/670 (22%), Positives = 277/670 (41%), Gaps = 108/670 (16%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQK-RFQHTADTYCKMILKLGLA 109
           EA +  LR  +S D ++++     D   A ++F+ +S  +  FQH+  T           
Sbjct: 73  EAALDRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHT----------- 121

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           GN                     AL+  VF+    +R  G   +L N  +  F+  V+ +
Sbjct: 122 GN---------------------ALLD-VFARTKRHREAG--NLLKNELATIFRPDVETW 157

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           NV++      +     F  + +     G+ P++ T N +L  L ++ ++ +A+D F  + 
Sbjct: 158 NVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV- 216

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           ++    ++ TF I+I GL+    +  + S+  E    G  +++  YT I+          
Sbjct: 217 RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIV---------- 266

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
                                    N L +N ++ +A  ++E +   G TPT   +  ++
Sbjct: 267 -------------------------NWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301

Query: 350 RGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA 405
            GLC++G+ +E+++ L    ++ C      + +L++      + F A  + ++MA R +A
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLA 361

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D   +   IR L +  +I +A  +   M     VPD  T S  + G  K      A+R+
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F+ + A+ L  + + YS L+ GLC+  K+  A+E+   M K  C+  + ++NILI GLC 
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM---------LV 575
              V+ A         +G      TY  ++ GL K         VL  M         LV
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLV 541

Query: 576 EGC--ALDVEAYCILIQSMS------------------EQNKLKDCALFFNVMVKAGLVP 615
           +G   +  +E  C+L   M                   + N++ +    FN + K G+ P
Sbjct: 542 DGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-P 600

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
                 S++  L    +++     + + ++     D   YN L+NG+       +A Y  
Sbjct: 601 HPYAYNSIISALIKSGKVN-EGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAHYYY 659

Query: 676 DLMLGKGWVP 685
             M G+G+VP
Sbjct: 660 LEMTGRGYVP 669


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 211/460 (45%), Gaps = 21/460 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR----GFADFV-FVY 190
           SLV ++ N      A ++   MN+ G      V+N+ +G+I   +        D    VY
Sbjct: 346 SLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVY 405

Query: 191 KEMVKAGIVPN-VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +EM+ A  V N ++T N+    L    + E A    + M +KG  P++ T+  VI  L  
Sbjct: 406 EEMLVASCVLNKINTANFA-RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQ 464

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             RVD +  +  EM  +G+  ++  YT +I   C+   +E+A   F  MR+    P+ +T
Sbjct: 465 AKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVT 524

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++   ++ +L  ANDI   M+     P    +  ++ GLC+ G+  ++        
Sbjct: 525 YTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLI 584

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
           G   +  +           F+       K  D    +  ++   +  LC+ +++  A++L
Sbjct: 585 GTSDNIES----------DFYFEG----KDTDTISPNVVTYGALVNGLCKAQKVSDAHDL 630

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M+ +   P+   Y A V G CK+   + A  VF +++    +    +Y+ L++ + +
Sbjct: 631 LDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFK 690

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             ++  A++V   M K+ C+ +  ++  ++ GLC   + +KA+ L SL    G S    T
Sbjct: 691 DGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVT 750

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           YT ++ GL K  +    L +  QM  +GCA +   Y ILI
Sbjct: 751 YTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 153/710 (21%), Positives = 272/710 (38%), Gaps = 99/710 (13%)

Query: 48  TDYEAK----IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMI 103
            D++ K    ++  R  L+   ++ VL         ++ F W   Q  ++HT   Y  + 
Sbjct: 82  ADFDGKAERFLRRYREFLTDSVVVAVLGAVRSPELCVRFFLWAERQVGYKHTGACYDALA 141

Query: 104 LKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNG----AMRVLVNMNS 159
             LG     E+     + +++E   + R+ L  L+   V    + G    A+  L  +  
Sbjct: 142 EVLGF----EDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKD 197

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
            G++ S   +N ++  +     G  +  F V KEM  +G   +  T+    + L +  R 
Sbjct: 198 FGYRPSAVTYNALVQVLASA--GQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRW 255

Query: 219 ESALDQFRR-----------------------------MHKKGC---CPNSRTFEIVIKG 246
             ALD   R                             +H+  C    PN  T+  ++ G
Sbjct: 256 GDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTG 315

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
            +   ++     I+  M   G     S +  ++   C       A +LF  M      P 
Sbjct: 316 FLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPG 375

Query: 307 ELTYEELINCLC--ENLR----LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
            + Y   I  +C  E L     LD A  + E+M+V           +  R LC VGKF++
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435

Query: 361 SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN 420
           +   ++                              E M    + D  ++   I +LC+ 
Sbjct: 436 AFQIVK------------------------------EMMRKGFVPDASTYTKVITFLCQA 465

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + + KA+ L   M    V PD  TY+  +   CK    E A   F ++ +     + ++Y
Sbjct: 466 KRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTY 525

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR------- 533
           + L+    + +++ +A ++F  M  + C  ++ +++ LI GLC   ++ KA         
Sbjct: 526 TALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIG 585

Query: 534 ----LRSLAYSSGTSYTT-----STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
               + S  Y  G    T      TY  ++ GL K Q+  D   +L  ML  GC  +   
Sbjct: 586 TSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIV 645

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  L+    +  ++      F  M K G +P   T  SL+  +    +L L    +++++
Sbjct: 646 YDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 705

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            DS   +   Y  +++GL K G T +A  LL LM  KG  P+  T+  L+
Sbjct: 706 KDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALI 755



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 153/670 (22%), Positives = 271/670 (40%), Gaps = 74/670 (11%)

Query: 92  FQHTADTYCKMILKLGLAGNVE-------EM--EGLC----------QNMVKE-RYPNVR 131
           ++ +A TY  ++  L  AG VE       EM   G C          Q + KE R+ +  
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDAL 259

Query: 132 EAL------------ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           + L              ++   +     N AM  L  M    +  +V  +  +L   +++
Sbjct: 260 DLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKK 319

Query: 180 KR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K+ G+   +     M+  G  P+    N L+           A   F RM+  GC P   
Sbjct: 320 KQLGWCKRII--NMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYV 377

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQL--ELSFYTCIIPM---------LCRENK 287
            + I I  +     + +      E+ DL  ++  E+   +C++           LC   K
Sbjct: 378 VYNIFIGSICGREELPNP-----ELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGK 432

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            E+A ++ K M     +PD  TY ++I  LC+  R+D A  + ++M  +G+ P    +  
Sbjct: 433 FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADR 402
           ++   C+ G  +++ ++ ++      SP    + ALL     + + + A  I  +M  D 
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS----------------VVPDCATYS 446
              +  +++  I  LC+  EI+KA E+  +++ +S                + P+  TY 
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           A V G CK     DA  +   + A     + I Y  LV+G C+V +I  A EVF  M+K 
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G   S  ++  LI  +    ++D A+++ S       +    TYT ++ GL K    +  
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKA 732

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L +L+ M  +GC+ +V  Y  LI  + +  K+      F  M   G  P+  T   L++ 
Sbjct: 733 LNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINH 792

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                 L      ++++           Y   + G  K  L S    LL+ M      P 
Sbjct: 793 CCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLG--LLEEMESHDTAPI 850

Query: 687 ATTHGLLVGS 696
           A  +G+L+ S
Sbjct: 851 APVYGMLIDS 860



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 221/532 (41%), Gaps = 87/532 (16%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A +++  M   GF      +  V+  + + KR    F+ +++EM K G+ P+V T   L+
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFL-LFQEMKKVGVNPDVYTYTILI 494

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +   +   IE A   F  M   GC PN  T+  ++   + + ++  +  I   M      
Sbjct: 495 DSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACY 554

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLF-KMMRALD---------------LMPDELTYEEL 313
                Y+ +I  LC+  ++++A  ++ K++   D               + P+ +TY  L
Sbjct: 555 PNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGAL 614

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD--ESVNFLEDKCGY 371
           +N LC+  ++ DA+D+L+ M+  G  P   V+  +V G C+VG+ D  + V     KCGY
Sbjct: 615 VNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGY 674

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
           + S H                      + DR   D                +  A ++L 
Sbjct: 675 LPSVHT------------------YTSLIDRMFKD--------------GRLDLAMKVLS 702

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +M+  S  P+  TY+A V G CK    E AL +   +  +    + ++Y+ L++GL +  
Sbjct: 703 QMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV-------------------------MR 526
           K+   +E+F  M   GC+ +  ++ ILI   C                           R
Sbjct: 763 KVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYR 822

Query: 527 KVDKAIRLRSLAY--------SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
              +    R LA         S  T+     Y  ++    K  R +  L +  +M+    
Sbjct: 823 TTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSS 882

Query: 579 ALDVEA---YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
           +L++ +   +  LIQ++   +++++    ++ M + G+VPD    + L+ GL
Sbjct: 883 SLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGL 934



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 206/508 (40%), Gaps = 45/508 (8%)

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
            R   ++++         +++  LG + D G +     Y  ++ +L    ++E A R+ K
Sbjct: 169 GRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQK 228

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD------IVR 350
            M A     D  T       LC+  R  DA D+LE          +D  +D      ++ 
Sbjct: 229 EMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---------REDFKLDTVLCTQMIS 279

Query: 351 GLCEVGKFDESVNFLED-KC-GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           GL E   F+E+++FL   +C  Y+ +   +  LL       +    K I+  M       
Sbjct: 280 GLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNP 339

Query: 407 CDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF---VLGKCKLCNYE--- 459
             S +N  +   C  E+   AY+L  RM      P    Y+ F   + G+ +L N E   
Sbjct: 340 SPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLD 399

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A +V+ ++   S VL+ I+ +     LC V K  +A ++   M + G    +S++  +I
Sbjct: 400 LAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVI 459

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
             LC  ++VDKA  L       G +    TYT ++    K    +       +M   GC+
Sbjct: 460 TFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCS 519

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            +V  Y  L+ +  +  +L      F+ MV     P+  T  +L+ GL    ++      
Sbjct: 520 PNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEV 579

Query: 640 INKLVSDSEVLDSSM----------------YNILINGLWKEGLTSQASYLLDLMLGKGW 683
             KL+  S+ ++S                  Y  L+NGL K    S A  LLD ML  G 
Sbjct: 580 YAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGC 639

Query: 684 VPDATTHGLLVGS--SVGEEIDSRRFAF 709
            P+   +  LV     VG EIDS +  F
Sbjct: 640 EPNQIVYDALVDGFCKVG-EIDSAQEVF 666



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 103/539 (19%), Positives = 210/539 (38%), Gaps = 68/539 (12%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G  E+   + + M+++ +         ++       RV+ A  +   M   G    V  +
Sbjct: 431 GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTY 490

Query: 170 NVVL-----GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            +++       ++E+ + + D      EM  AG  PNV T   LL    ++ ++  A D 
Sbjct: 491 TILIDSFCKAGLIEQAQSWFD------EMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY--------- 275
           F RM    C PN+ T+  +I GL     +  +  +  ++      +E  FY         
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604

Query: 276 -------TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
                    ++  LC+  K+ +A  L   M A    P+++ Y+ L++  C+   +D A +
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYVTSPHNALLECCC 384
           +   M   G  P+   +  ++  + + G+ D ++      L+D C      + A+++  C
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724

Query: 385 NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             G+   A  +L  M  +  + +  ++   I  L +  ++    EL  +M      P+  
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYV 784

Query: 444 TYSAFVLGKCK----------------------LCNYEDALRVFRQVSAQSLVL------ 475
           TY   +   C                       L  Y   ++ F +    SL L      
Sbjct: 785 TYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMES 844

Query: 476 -DSIS----YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI---LIYGLCVMRK 527
            D+      Y  L++   +  ++  A+E+   M +   SL+ +S ++   LI  LC+  +
Sbjct: 845 HDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQ 904

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           V++A+ L S     G     S +  ++ GL++  +  + L +   +  EG   +   +C
Sbjct: 905 VEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVNWEGNKFC 963



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 118/529 (22%), Positives = 212/529 (40%), Gaps = 63/529 (11%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +  R L        A +I K + ++K F   A TY K+I  L  A  V++   L Q M K
Sbjct: 422 NFARCLCGVGKFEKAFQIVKEM-MRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK 480

Query: 125 ERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A      M S G   +V  +  +L A ++ K+ +
Sbjct: 481 VGVNPDVYTYTI-LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLY 539

Query: 184 -ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-------------- 228
            A+ +F    MV     PN  T + L++ L +   I+ A + + ++              
Sbjct: 540 QANDIF--HRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFE 597

Query: 229 --HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
                   PN  T+  ++ GL    +V D+  +L  M   G +     Y  ++   C+  
Sbjct: 598 GKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVG 657

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +++ A  +F  M     +P   TY  LI+ + ++ RLD A  +L  M+     P    + 
Sbjct: 658 EIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYT 717

Query: 347 DIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
            +V GLC+ G+ ++++N L    +  C      + AL++    AGK      +  +M  +
Sbjct: 718 AMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTK 777

Query: 403 KIA-DCDSWNIPIRWLCE----------NEEIRKAY-----------------------E 428
             A +  ++ I I   C            +E+++ +                        
Sbjct: 778 GCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLG 837

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS---YSKLVE 485
           LL  M      P    Y   +    K    E AL + +++   S  L+  S   ++ L++
Sbjct: 838 LLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQ 897

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            LC   ++ EAV ++  M + G     S+F  L+ GL    K ++A++L
Sbjct: 898 ALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 122/310 (39%), Gaps = 46/310 (14%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D +CK+       G ++  + +   M K  Y        SL+       R++ AM+VL  
Sbjct: 651 DGFCKV-------GEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 703

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M       +V  +  ++  +   K G  +    +   M K G  PNV T   L++ L + 
Sbjct: 704 MLKDSCNPNVVTYTAMVDGLC--KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKA 761

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA-------------------------- 249
            ++++ L+ F +M  KGC PN  T+ I+I    A                          
Sbjct: 762 GKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGY 821

Query: 250 -------NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
                  + R   S+ +L EM           Y  +I    +  +LE A+ L K M  + 
Sbjct: 822 RTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVS 881

Query: 303 L---MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
               M  +  +  LI  LC + ++++A  +  +M   G+ P    FV +V+GL E  K++
Sbjct: 882 SSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWN 941

Query: 360 ESVNFLEDKC 369
           E++      C
Sbjct: 942 EALQLCYGIC 951



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/136 (20%), Positives = 62/136 (45%), Gaps = 3/136 (2%)

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS- 273
           + R  ++L     M      P +  + ++I       R++ ++ +  EM ++   L ++ 
Sbjct: 829 SKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMAS 888

Query: 274 --FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
              +T +I  LC  +++EEA+ L+  MR   ++PD   +  L+  L E  + ++A  +  
Sbjct: 889 KDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCY 948

Query: 332 DMIVIGLTPTDDVFVD 347
            +   G+    + F D
Sbjct: 949 GICQEGVNWEGNKFCD 964


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 159/645 (24%), Positives = 285/645 (44%), Gaps = 65/645 (10%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TYCK   + GL    EE   L + M+   + P+V     S+V       R++ A  +L  
Sbjct: 247 TYCK---QHGL----EEARALYEEMIINGFLPDVV-TYSSIVNGLCKDGRLSEAQELLRE 298

Query: 157 MNSGGFKLSVDVFNVVLGAIVEE--KRGFADFVFV-YKEMVKAGIVPNVDTLNYLLEVLF 213
           M     K+ VD  +V    +++   K G A   F    ++V  G+  ++     L++ LF
Sbjct: 299 MK----KMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLF 354

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           ++++ + A D FR + K    PNS T+  +I G      ++   S+L EM +  I   + 
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y+ II    ++  L+EAI + K M   +++P+   Y  LI+  C+  + + A D+  +M
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--------HNALLECCCN 385
            + GL   + +F  +V  L    + DE+   L+D    VTS         + +L++    
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD----VTSRGLLLDHVNYTSLMDGFFK 530

Query: 386 AGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           AGK   A  ++E+M ++ I  D  ++N+ I  L E+ +  +A  +   M+   + P+ AT
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQAT 589

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  +   CK    ++AL ++ ++ +  ++  SI+ + LV GL +  +I +A+ V   MS
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS 649

Query: 505 -----------------------------------KNGCSLSSSSFNILIYGLCVMRKVD 529
                                                G  ++  ++N LI   C +R   
Sbjct: 650 VMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTK 709

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           KA  +       G    T TY  ++ G  +    K  L    QML EG + ++  Y +L+
Sbjct: 710 KATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLL 769

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
             +     + +    F+ M + GL PD  T  +L+ G               ++V+   V
Sbjct: 770 GGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFV 829

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +S YN+LI+   K G   QA  LL+ M  +G  P ++T+ +L+
Sbjct: 830 PKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/535 (23%), Positives = 235/535 (43%), Gaps = 35/535 (6%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           +V  G   +V   N L++   +   +  ALD   RM K+G   +  ++  +I G      
Sbjct: 138 LVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGE 197

Query: 253 VDDSVSILGEMFD---------------------LGIQLELSFYTCIIPMLCRENKLEEA 291
            D + S+L E+ +                     L ++ +L  YT II   C+++ LEEA
Sbjct: 198 YDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEA 257

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L++ M     +PD +TY  ++N LC++ RL +A ++L +M  +G+ P    +  ++  
Sbjct: 258 RALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDS 317

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
           L + G   E+  F       V      L+ C       F  K    K A+         N
Sbjct: 318 LFKAGSAWEA--FACQSQLVVRGMTLDLVMCTTLVDGLF--KSSKPKEAEDMFRALSKLN 373

Query: 412 -IP--------IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            IP        I   C+  ++ +   LL  M    + P+  TYS+ + G  K    ++A+
Sbjct: 374 LIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAI 433

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            V +++  Q+++ ++  Y+ L++G C+  K   A +++  M  +G  +++  F++L+  L
Sbjct: 434 NVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNL 493

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
              +++D+A  L     S G       YT +M G  K  +    L ++ +M  +    DV
Sbjct: 494 KRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDV 553

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y +LI  + E  K +  +++   M++ GL P++ T   ++       +L       N+
Sbjct: 554 VTYNVLINGLLEHGKYEAKSVYSG-MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNE 612

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
           + S   +  S   N L+ GL + G   +A  +L+ M   G  P+   H +L+ +S
Sbjct: 613 MKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNAS 667



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 197/417 (47%), Gaps = 11/417 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY--LLEVLFE 214
           M   G K++  +F+V++  +   KR   +   + K++   G++  +D +NY  L++  F+
Sbjct: 474 MKLSGLKVNNVLFDVLVNNLKRGKR-MDEAEELLKDVTSRGLL--LDHVNYTSLMDGFFK 530

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             +  +AL+    M +K    +  T+ ++I GL+ + + + + S+   M ++G+    + 
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQAT 589

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I   C++ +L+ A+ L+  M++  +MP  +T   L+  L E   ++ A ++L +M 
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS 649

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFF 390
           V+G+ P   +   ++    + GK +  +   E             +N L+   C      
Sbjct: 650 VMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTK 709

Query: 391 LAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +L+ M  D  +AD  ++N  IR  CE+  ++KA     +M+   V P+  TY+  +
Sbjct: 710 KATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLL 769

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G        +   +F ++    L  D+ +Y  L+ G  ++    E++ ++C M   G  
Sbjct: 770 GGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFV 829

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
             +S++N+LI     + K+D+A  L +     G   ++STY  ++ G   L +  DL
Sbjct: 830 PKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDL 886



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 231/524 (44%), Gaps = 22/524 (4%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           D+  AL     +     +    D YCK+       G++E +E L Q M +E++ N     
Sbjct: 364 DMFRALSKLNLIPNSITYTALIDGYCKV-------GDMERVESLLQEM-EEKHINPNVIT 415

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE---KRGFADFVF-VY 190
            S   S +N Y   G +   +N+       ++ + N  + AI+ +   K G  +    +Y
Sbjct: 416 YS---SIINGYTKKGILDEAINVMKKMLDQNI-IPNAYVYAILIDGYCKAGKQEIATDLY 471

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            EM  +G+  N    + L+  L    R++ A +  + +  +G   +   +  ++ G    
Sbjct: 472 NEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKA 531

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +   +++++ EM +  I  ++  Y  +I  L    K E A  ++  M  + L P++ TY
Sbjct: 532 GKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATY 590

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +I   C+   LD+A ++  +M    + P+      +V GL E G+ ++++N L +   
Sbjct: 591 NIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV 650

Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
               P    H  LL     +GK      + E++ D  +  + +++N  I   C     +K
Sbjct: 651 MGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK 710

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +L  M+    V D  TY+A + G C+  + + AL  + Q+  + +  + ++Y+ L+ 
Sbjct: 711 ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLG 770

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GL     + E  E+F  M +NG +  +S+++ LI G   +    ++IRL     + G   
Sbjct: 771 GLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVP 830

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            TSTY  ++    K+ +      +L +M V G       Y ILI
Sbjct: 831 KTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 221/539 (41%), Gaps = 43/539 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR--------------------- 227
           +Y EM+ + + PNV T N L+    +   +  ALD  R                      
Sbjct: 32  IYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRNVDVEVDTVTYNTVIWGFCQHG 91

Query: 228 -----------MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
                      M KK  C ++ T  I++KG            I+  +   G   ++  + 
Sbjct: 92  LVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFN 151

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I   C+  ++  A+ L + MR   L+ D ++Y  LIN  C+    D A  +L + I  
Sbjct: 152 TLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHE-ISE 210

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
                D VF +I   +    K D+++N   D   Y T     ++   C       A+ + 
Sbjct: 211 SRGVKDSVFFNIDDRI----KKDDNLNLEADLITYTT-----IISTYCKQHGLEEARALY 261

Query: 397 EKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M  +  + D  +++  +  LC++  + +A ELL  M    V P+   Y+  +    K 
Sbjct: 262 EEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKA 321

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            +  +A     Q+  + + LD +  + LV+GL +  K  EA ++F  +SK     +S ++
Sbjct: 322 GSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITY 381

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI G C +  +++   L         +    TY+ I+ G  K     + + V+ +ML 
Sbjct: 382 TALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLD 441

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +    +   Y ILI    +  K +     +N M  +GL  +      L++ L  G ++  
Sbjct: 442 QNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDE 501

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               +  + S   +LD   Y  L++G +K G  S A  +++ M  K    D  T+ +L+
Sbjct: 502 AEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLI 560



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 42/373 (11%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F    + + A+ ++  M        V  +NV++  ++E   G  +   VY  M++
Sbjct: 523 SLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLE--HGKYEAKSVYSGMIE 580

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PN  T N +++   +   +++AL+ +  M      P+S T   ++ GL     ++ 
Sbjct: 581 MGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEK 640

Query: 256 SVSILGEM-----------------------------------FDLGIQLELSFYTCIIP 280
           ++++L EM                                    D+G+++    Y  +I 
Sbjct: 641 AMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIV 700

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           + CR    ++A  + K M     + D +TY  LI   CE+  +  A      M+  G++P
Sbjct: 701 VFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSP 760

Query: 341 ---TDDVFVDIVRGLCEVGKFDESVNFL-EDKCGYVTSPHNALLECCCNAG-KFFLAKCI 395
              T ++ +  + G   + + DE  + + E+      S ++ L+      G K    +  
Sbjct: 761 NIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLY 820

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            E +A   +    ++N+ I    +  ++ +A ELL  M V  V P  +TY   + G C L
Sbjct: 821 CEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNL 880

Query: 456 CNYEDALRVFRQV 468
             + D  R  +++
Sbjct: 881 SKHPDLDRTLKKI 893



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 153/323 (47%), Gaps = 18/323 (5%)

Query: 50  YEAK-IQS--LRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           YEAK + S  +   L+P+      +I+      +L +AL+++  +   K    ++ T   
Sbjct: 569 YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK-IMPSSITCNT 627

Query: 102 MILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSG 160
           +++ L  AG +E+   +   M V   +PN+    + L+ +     + N  +++   +   
Sbjct: 628 LVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRV-LLNASSKSGKANAVLQMHEQLVDM 686

Query: 161 GFKLSVDVFN---VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           G K++ + +N   VV   +   K+  +    V K M++ G V +  T N L+    E++ 
Sbjct: 687 GLKINQEAYNNLIVVFCRLRMTKKATS----VLKYMIRDGFVADTVTYNALIRGYCESSH 742

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ AL  + +M  +G  PN  T+ +++ GL+    + +   +  +M + G+  + S Y  
Sbjct: 743 VKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDT 802

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +    +E+IRL+  M A   +P   TY  LI+   +  ++D A ++L +M V G
Sbjct: 803 LISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRG 862

Query: 338 LTPTDDVFVDIVRGLCEVGKFDE 360
           + P+   +  ++ G C + K  +
Sbjct: 863 VPPSSSTYDILICGWCNLSKHPD 885


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 136/601 (22%), Positives = 257/601 (42%), Gaps = 53/601 (8%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDT 204
           R   A+  L   +   F  SV  FN ++      K G AD     +  M+K GI+P+  +
Sbjct: 165 RFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYC--KLGLADVAKSFFCMMLKYGILPDTYS 222

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N L+  L     +E AL+    M K+G  P+  T++IV KG      +  +  I+ +M 
Sbjct: 223 YNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKML 282

Query: 265 -DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
            D G++ +L  YT +I   C+   +EEA+RL + + +     + + Y  L++ LC+  ++
Sbjct: 283 TDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQV 342

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
           D+A  +L +M    L P    +  ++ GLC+ GK  +++   ++ C     P    H+ +
Sbjct: 343 DEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGI 402

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           L+  C  G    A+   + +    +  D   +NI I    +  ++ +A  L  R+   ++
Sbjct: 403 LKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P   T+++ + G CK     +A R+   +    L   +++Y+ L+   C+   I +  E
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHE 522

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M+      +  ++ ++I GLC  RK++++++L     + G +    TY  I+    
Sbjct: 523 LLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC 582

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC---------------AL 603
           K +  +    +L  ML+         Y +LI  +     ++D                 +
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKV 642

Query: 604 FFNVMVKAGLVP-DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
            +  M+KA  V  D +  + + H         +V  G    + D        Y+ +IN L
Sbjct: 643 AYTTMIKAHCVKGDAQRAVKVFH--------QMVEKGFEVSIKD--------YSAVINRL 686

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDIL 722
            K  L ++A Y   +ML  G  PD     +++             AF  +    SV ++L
Sbjct: 687 CKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLN------------AFHRAGHVHSVFELL 734

Query: 723 A 723
           A
Sbjct: 735 A 735



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 217/443 (48%), Gaps = 12/443 (2%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTL 205
           +  A+R+  ++ S GF+L+V +++V+L ++   KRG  D    +  EM    + P++ T 
Sbjct: 307 IEEALRLRRDLLSSGFQLNVILYSVLLSSLC--KRGQVDEALQLLYEMEANNLQPDLVTY 364

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L+  L +  +++ A+  ++ M      PNS     ++KGL     + D+      +  
Sbjct: 365 SILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIM 424

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             ++ +++ Y  +I    +   +EEA+RL+K +R   + P  +T+  LI   C+N ++ +
Sbjct: 425 SNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVE 484

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE------SVNFLEDKCGYVTSPHNAL 379
           A  +LE + + GL P+   +  ++   CE G  ++       +N  + +   VT  +  +
Sbjct: 485 ARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVT--YTVV 542

Query: 380 LECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           ++  C   K   +  +LE M  + +A D  ++N  I+  C+ +++RKA+ELL  M++ ++
Sbjct: 543 IKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNL 602

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P  ATY+  + G C+  + EDA RV   +  +++ L  ++Y+ +++  C       AV+
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVK 662

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           VF  M + G  +S   ++ +I  LC    +++A     +  S G S     +  ++    
Sbjct: 663 VFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFH 722

Query: 559 KLQRAKDLLVVLAQMLVEGCALD 581
           +      +  +LA M+  G   D
Sbjct: 723 RAGHVHSVFELLAVMIKFGLLHD 745



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 129/559 (23%), Positives = 246/559 (44%), Gaps = 12/559 (2%)

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
           K R+ ++R  L  ++   V    V+ A+ VLV M     + S+  +N +L  +       
Sbjct: 76  KRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRH----- 130

Query: 184 ADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            D ++ VY ++  +G   +  T + +++ L   +R   A+   R+   K   P+  +F  
Sbjct: 131 TDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNT 190

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++         D + S    M   GI  +   Y  +I  L     +EEA+ L   M    
Sbjct: 191 IMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQG 250

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVI-GLTPTDDVFVDIVRGLCEVGKFDES 361
           L PD +TY+ +         +  A +I++ M+   GL P    +  ++ G C++G  +E+
Sbjct: 251 LQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEA 310

Query: 362 VNFLED--KCGYVTSP--HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRW 416
           +    D    G+  +   ++ LL   C  G+   A  +L +M A+    D  +++I I  
Sbjct: 311 LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHG 370

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+  ++++A +L   M  + + P+   +S  + G C+     DA   F  +   +L  D
Sbjct: 371 LCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPD 430

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
              Y+ +++G  ++  + EAV ++  +     + S  +FN LIYG C  RKV +A RL  
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLE 490

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G   +  TYT +M    +      L  +L +M ++     V  Y ++I+ + +Q 
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           KL++       M   GL PD+ T  +++        +      ++ ++  +     + YN
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYN 610

Query: 657 ILINGLWKEGLTSQASYLL 675
           +LI+GL + G    A  +L
Sbjct: 611 VLIDGLCRYGDVEDADRVL 629



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 195/485 (40%), Gaps = 83/485 (17%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN-DILEDMIVIGLTPTDDVFV 346
           + +A+ +   M+  +L P   TY    N L  NLR  D   D+  D+   G   +     
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTY----NSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSS 154

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            IV GLC   +F ++V FL    G   +P     N ++   C  G   +AK     M   
Sbjct: 155 IIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKY 214

Query: 403 KI-ADCDSWNIPIRWLC---ENEE----------------------IRKAYELLG----- 431
            I  D  S+NI I  L      EE                      + K + LLG     
Sbjct: 215 GILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGA 274

Query: 432 RMVVSSVV------PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           R ++  ++      PD  TY+  + G C++ N E+ALR+ R + +    L+ I YS L+ 
Sbjct: 275 REIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS 334

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC+  ++ EA+++   M  N       +++ILI+GLC   KV +AI+L      +    
Sbjct: 335 SLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            +  ++ I+ GL +     D  +    +++     DV  Y I+I    +   +++    +
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLY 454

Query: 606 NVMVKAGLVPDRETMLSLLHG------------LADGSQLHLVS---------------- 637
             +    + P   T  SL++G            L +  +LH +                 
Sbjct: 455 KRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEE 514

Query: 638 SGINKL--------VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             INKL        + D E    + Y ++I GL K+    ++  LL+ M  KG  PD  T
Sbjct: 515 GNINKLHELLLEMNLKDIEPTVVT-YTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQIT 573

Query: 690 HGLLV 694
           +  ++
Sbjct: 574 YNTII 578


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 122/532 (22%), Positives = 239/532 (44%), Gaps = 36/532 (6%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIF---KWVSIQKR 91
           L++ +  I + QT    + ++ L  +  P H I +++      S   +F    W+S    
Sbjct: 37  LAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPT 96

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMV----KERYPNVREALI------------ 135
           F+HT+ +YC M   L      +E + + + +V    K+   +V  A++            
Sbjct: 97  FRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVF 156

Query: 136 -SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +L+ ++ +   V+ A++    + +  F++       +L  ++        + F Y E++
Sbjct: 157 DALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTF-YSEIL 215

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G  P V   N L+    +   I  A   F  + K+G  P + +F  +I GL  +  +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +   +   M +  I  ++  Y+ +I  LC+E +L+ A +LF  M+   L P+ +T+  LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---------VNFL 365
           +  C + R+D A +    M+ +G+ P   ++  ++ GLC+VG  +++         V   
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
            DK  Y T     L++  C  G    A  I + M +  +  D  ++   I   C +  +R
Sbjct: 396 PDKITYTT-----LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A   L  MV + + PD ATY+  + G CK  N +   ++ +++         I+Y+ L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            GLC+  ++  A  +   M   G +    ++NIL+ G C   K +  ++LR+
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN 562



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 1/320 (0%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMV 434
           +N L+   C  G    AK I  ++  R +     S+N  I  LC++  + + + L   M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            + + PD  TYS  + G CK    + A ++F ++  + L  + I+++ L++G C+  +I 
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A+  +  M   G       +N L+ GLC +  V+KA +L       G      TYT ++
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G  K    +  + +   M  EG  LD  A+  LI       +++D       MV+AG+ 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  T   ++ G      + +    + ++  +        YN+L+NGL K+G    A+ L
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525

Query: 675 LDLMLGKGWVPDATTHGLLV 694
           L+ ML  G  PD  T+ +L+
Sbjct: 526 LEAMLNLGVTPDDITYNILL 545



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 166/353 (47%), Gaps = 9/353 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F     +  A  +   +   G + +   FN ++  + +  R   +   + K M + 
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS-RNLDEGFRLKKTMEEN 287

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            I P+V T + L+  L +  R++ A   F  M ++G  PN  TF  +I G   + R+D +
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSA 347

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           ++   +M  +G++ +L  Y  ++  LC+   + +A +L   MR + + PD++TY  LI+ 
Sbjct: 348 MNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDG 407

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
            C+   L+ A +I + M   G+   +  F  ++ G C  G+  ++   L +       P 
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467

Query: 377 NA----LLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
           +A    +++  C  G   +   +L++M  +       ++N+ +  LC+  +++ A  LL 
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLE 527

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            M+   V PD  TY+  + G CK    ED L++  +   + L++D   Y+ LV
Sbjct: 528 AMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLV 577



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 157/390 (40%), Gaps = 33/390 (8%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P    Y  LIN  C+   + DA  I  ++   GL PT   F  ++ GLC+    DE    
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG--- 277

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
                                   F L K + E   +R   D  ++++ I  LC+   + 
Sbjct: 278 ------------------------FRLKKTMEE---NRIYPDVFTYSVLIHGLCKEGRLD 310

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A +L   M    + P+  T++A + G+C+    + A+  + Q+    +  D + Y+ L+
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLL 370

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+V  + +A ++   M   G      ++  LI G C    ++ A+ +R      G  
Sbjct: 371 NGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                +T ++ G  +  R +D    L +M+  G   D   Y ++I    ++  +K     
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              M   G  P   T   L++GL    Q+   +  +  +++     D   YNIL+ G  K
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G   +A  LL L   KG + D   +  LV
Sbjct: 551 NG---KAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 51  EAKIQSLRHN-LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           E + + LR   +S + LI  L  + +L    ++ K +  + R      TY  +I  L   
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME-ENRIYPDVFTYSVLIHGLCKE 306

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G ++  E L   M +           +L+       R++ AM     M + G K  + ++
Sbjct: 307 GRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMY 366

Query: 170 NVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           N +L  +     V + R   D      EM   G+ P+  T   L++   +   +ESA++ 
Sbjct: 367 NTLLNGLCKVGDVNKARKLVD------EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            + M+++G   ++  F  +I G   + RV D+   L EM + G++ + + YT +I   C+
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           +  ++   +L K M+     P  +TY  L+N LC+  ++ +AN +LE M+ +G+TP D  
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 345 FVDIVRGLCEVGKFDESVNFLEDK 368
           +  ++ G C+ GK ++ +    +K
Sbjct: 541 YNILLEGHCKNGKAEDLLKLRNEK 564


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 8/350 (2%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++    P++   + LL  +       + L  +++M   G   N+ T  I+I      +R
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +  + S+LG++  LG Q   + +T +I  LC E K+ EA++LF  M      PD LTY  
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LIN LC++ +L +A  +  DM+  G++P +  +  ++ GLC +G + E++          
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 373 TSP----HNALLECCCNAGKFFL---AKCILEKMADRK-IADCDSWNIPIRWLCENEEIR 424
             P     N L++  C  G   +   A  + E+M+ +  I D  ++N  I  LC    +R
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  L   MVV   +PD  TY       CK     +A+ + + +   +L  D   YS ++
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           +G+C+  ++  A ++F  +S  G      ++ I+I GLC    + +A +L
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 350



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 178/364 (48%), Gaps = 13/364 (3%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F+ +L +I   K  ++  + +YK+M   GI  N  TLN L+      NR+  A      +
Sbjct: 13  FSKLLTSITRMKH-YSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDI 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ TF  +I+GL    ++ +++ +  +M   G Q ++  Y  +I  LC++ +L
Sbjct: 72  LKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQL 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            EA+ LF  M A  + P+  TY  LI+ LC      +A  +   MI   + P    F  +
Sbjct: 132 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 191

Query: 349 VRGLCEVGK---FDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKM-A 400
           V  LC+ G     D+++   E+  + G +  T  +N L+   C+ G+   A  +  +M  
Sbjct: 192 VDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV 251

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +I D  ++ I   +LC+N  + +A  LL  +  +++ PD   YS  + G C+    E 
Sbjct: 252 YGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEA 311

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG----CSLSSSSFN 516
           A  +F ++S++ L  D  +Y+ ++ GLCQ   + EA ++F  M +N      + S ++F 
Sbjct: 312 ARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFK 371

Query: 517 ILIY 520
            + Y
Sbjct: 372 GIFY 375



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 161/356 (45%), Gaps = 11/356 (3%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M++ R P        L+ S       +  + +   M+S G   +    N+++ +     R
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 182 -GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
            GFA    V  +++K G  P+  T   L+  L    +I  AL  F +M  +G  P+  T+
Sbjct: 61  LGFA--FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTY 118

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I GL  + ++ +++S+  +M   GI      Y+ +I  LC     +EAIRLF  M  
Sbjct: 119 GTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIH 178

Query: 301 LDLMPDELTYEELINCLCENLR---LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
             +MPD+LT+  L++ LC+      +D A  + E+M   GL P    +  ++ GLC VG+
Sbjct: 179 RKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 238

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
             +++    +   Y   P    +  L +  C   +   A  +L+ +    +  D   ++I
Sbjct: 239 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 298

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
            +  +C   E+  A +L  ++    + PD  TY+  + G C+     +A ++F ++
Sbjct: 299 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 9/313 (2%)

Query: 375 PHNA-----LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
           PHN      L+   C+  +   A  +L  +          ++   IR LC   +I +A +
Sbjct: 42  PHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQ 101

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L  +M      PD  TY   + G CK     +AL +F  + A+ +  ++ +YS L+ GLC
Sbjct: 102 LFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 161

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC---VMRKVDKAIRLRSLAYSSGTSY 545
            +    EA+ +F  M          +FN L+  LC   +++ +DKA+ L       G   
Sbjct: 162 ILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIP 221

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
            T TY  ++ GL  + R +D + +  +M+V G   D+  Y IL   + + ++L +  +  
Sbjct: 222 DTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLL 281

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
            V+    L PD      ++ G+    +L       +KL S     D   Y I+INGL ++
Sbjct: 282 KVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQ 341

Query: 666 GLTSQASYLLDLM 678
           GL ++AS L   M
Sbjct: 342 GLLAEASKLFGEM 354



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 15/295 (5%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           + NI I   C    +  A+ +LG ++     P  AT++  + G C      +AL++F ++
Sbjct: 47  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 106

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           + +    D ++Y  L+ GLC+  ++TEA+ +F  M   G S ++ +++ LI+GLC++   
Sbjct: 107 TGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 166

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAY 585
            +AIRL              T+  ++  L K   +Q     + +  +M  +G   D   Y
Sbjct: 167 KEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTY 226

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL------HGLADGSQLHLVSSG 639
             LI  +    +L+D    F+ MV  G +PD  T   L       H LA+   L  V  G
Sbjct: 227 NTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEG 286

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            N    D ++    +Y+I+++G+ + G    A  L   +  KG  PD  T+ +++
Sbjct: 287 TNL---DPDI---HIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 335



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 4/241 (1%)

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           + +++ L+ GLC   KI EA+++F  M+  G      ++  LI GLC  R++ +A+ L S
Sbjct: 80  TATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFS 139

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
              + G S    TY+ ++ GL  L   K+ + +   M+      D   +  L+ ++ ++ 
Sbjct: 140 DMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEG 199

Query: 597 --KLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
             ++ D A+  F  M + GL+PD  T  +L+HGL    +L    +  +++V   ++ D  
Sbjct: 200 MIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLV 259

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSS 712
            Y IL + L K    ++A  LL ++ G    PD   + +++ G     E+++ R  F   
Sbjct: 260 TYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKL 319

Query: 713 S 713
           S
Sbjct: 320 S 320



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 3/220 (1%)

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           + +SKL+  + +++  +  + ++  M   G   ++ + NILI   C + ++  A  +   
Sbjct: 11  VDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGD 70

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G   +T+T+T ++ GL    +  + L +  +M  EG   DV  Y  LI  + +  +
Sbjct: 71  ILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQ 130

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L +    F+ M+  G+ P+  T  SL+HGL               ++    + D   +N 
Sbjct: 131 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 190

Query: 658 LINGLWKEGLTS---QASYLLDLMLGKGWVPDATTHGLLV 694
           L++ L KEG+     +A  L + M  +G +PD  T+  L+
Sbjct: 191 LVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 230



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 5/241 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L     L+ AL +F  + + K       TY  +I  L + G+ +E   L   M+  
Sbjct: 121 LINGLCKDRQLTEALSLFSDM-LAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179

Query: 126 RYPNVREALISLVFSFVNHYRV---NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           +    +    +LV +      +   + AM +   M+  G       +N ++  +    R 
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR- 238

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
             D + ++ EMV  G +P++ T   L + L + +R+  A+   + +      P+   + I
Sbjct: 239 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 298

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           V+ G+     ++ +  +  ++   G+  ++  YT +I  LC++  L EA +LF  M   D
Sbjct: 299 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEND 358

Query: 303 L 303
           +
Sbjct: 359 I 359



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 91/207 (43%), Gaps = 5/207 (2%)

Query: 60  NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRF---QHTADTYCKMILKLGLAGNVEEME 116
           N +   LI  L        A+++F +  I ++    Q T +T    + K G+   +++  
Sbjct: 150 NFTYSSLIHGLCILGHWKEAIRLF-YAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAM 208

Query: 117 GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
           GL + M ++          +L+    +  R+  A+ +   M   G    +  + ++   +
Sbjct: 209 GLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYL 268

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
            +  R  A+ + + K +    + P++   + +++ +     +E+A D F ++  KG  P+
Sbjct: 269 CKNHR-LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 327

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEM 263
            RT+ I+I GL     + ++  + GEM
Sbjct: 328 VRTYTIMINGLCQQGLLAEASKLFGEM 354


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/549 (20%), Positives = 242/549 (44%), Gaps = 40/549 (7%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R FA    ++  M+ +G++ +       +    E   ++ A     RM  +G   ++  +
Sbjct: 176 RQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPY 235

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR---------------- 284
            ++I GL  N RV ++V +   M   G+  +      ++   CR                
Sbjct: 236 NVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMAR 295

Query: 285 -------------------ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
                              + ++EEA RL   +  L ++P+   Y  L+N +C+N    +
Sbjct: 296 LGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSE 355

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLE 381
           A+ ++ +M   GL P +  +  ++  LC+ G  D+++  L    E        P+N+L+ 
Sbjct: 356 ADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLIN 415

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
           CCC      +A   L +M +  +  +  S++  I  LC   ++  A EL  +M    V  
Sbjct: 416 CCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAW 475

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  T++A + G CK    ++A R+F +++  +L  + ++++ ++EG C V  I +A +++
Sbjct: 476 NTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLY 535

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M   G +  + ++  LI GLC+     KA    +   ++ +     + T ++ G  + 
Sbjct: 536 DQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCRE 595

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            R  +   V  +M + G  LD+ ++ I++ +  +Q+  +   + F  M + G+ PD    
Sbjct: 596 GRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             +++  +    +    +  +++++D  + ++  Y  L+N L K    S A  L   ML 
Sbjct: 656 TCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLA 715

Query: 681 KGWVPDATT 689
             ++P++ T
Sbjct: 716 SHFLPNSYT 724



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/543 (22%), Positives = 228/543 (41%), Gaps = 41/543 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M + G VP+    +++L+ L +  R+E A     ++ +    PN   +  ++  +  N 
Sbjct: 292 DMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNG 351

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
              ++  ++ EM D G++     Y  +I  LC+   +++A+ +   MR   +      Y 
Sbjct: 352 MFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYN 411

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LED 367
            LINC C+   LD A   L +M+ IGLTP    +  ++ GLC  G    +V       E 
Sbjct: 412 SLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEK 471

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKA 426
              + T    AL+   C A K   A  +  KM +  +   + ++N  I   C   +IRKA
Sbjct: 472 GVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKA 531

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           ++L  +M+   + PD  TY + + G C       A      +     VL+  S + L+ G
Sbjct: 532 FQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHG 591

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL---------CVMRK--VDKAIRLR 535
            C+  ++TEA  V+  M+  G  L   SF I++Y           CV+ +   +K +R  
Sbjct: 592 FCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPD 651

Query: 536 SLAYS------------------------SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           ++ ++                         G    T TYT ++  L K        ++  
Sbjct: 652 NVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCK 711

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +ML      +   +   +   + +  L+     +  M++ G + +  ++ +L+ G     
Sbjct: 712 EMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVG 770

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           Q+      I++   +    D   Y+ +I+ L K+G  ++A  L + ML KG  PD   + 
Sbjct: 771 QIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYN 830

Query: 692 LLV 694
           +L+
Sbjct: 831 ILI 833



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 244/574 (42%), Gaps = 51/574 (8%)

Query: 110 GNVEEMEGL-CQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G VEE   L CQ       PN+  A  +L+ +   +   + A R++  M+  G + +   
Sbjct: 316 GRVEEAFRLACQLGELRMVPNIF-AYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVT 374

Query: 169 FNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           + +++ ++   KRG  D    +   M + G+   V   N L+    + + ++ A+     
Sbjct: 375 YAILIHSLC--KRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSE 432

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M + G  PN+ ++  VI GL     +  +V +  +M + G+      +T +I   C+  K
Sbjct: 433 MVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKK 492

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++EA RLF  M   +L P+E+T+  +I   C    +  A  + + M+  GLTP +  +  
Sbjct: 493 MDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRS 552

Query: 348 IVRGLC---EVGKFDESVNFLEDKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMA--D 401
           ++ GLC      K  E V  LE+ C  +      ALL   C  G+   A  +  +MA   
Sbjct: 553 LISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWG 612

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            K+ D  S+ I +    +  +  K+  L   M    V PD   ++  +    K  N   A
Sbjct: 613 GKL-DLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQA 671

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS-------- 513
           L  + ++ A   + ++++Y+ LV  LC+   ++ A E+ C        L +S        
Sbjct: 672 LNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSA-ELLCKEMLASHFLPNSYTFNCFLD 730

Query: 514 ---------------------------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
                                      S N LI G C + ++ +AI L S +  +G    
Sbjct: 731 YFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPD 790

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             +Y+ ++  L K     + + +  +ML +G   D+ AY ILI+  +   +   C   + 
Sbjct: 791 CISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYI 850

Query: 607 VMVKAGLVPDRETMLSLLHG---LADGSQLHLVS 637
            MVK G+ P+  T  +L  G   ++ G+ L L+ 
Sbjct: 851 DMVKKGVQPNWHTHRALFVGTSLMSKGNTLMLIP 884



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 167/397 (42%), Gaps = 5/397 (1%)

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES- 361
           + PD+ T  +++  L +  +   A  + + M+  G+   + V+   +R  CEV   D + 
Sbjct: 158 IAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAK 217

Query: 362 --VNFLEDKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWL 417
             V  ++D+   V++ P+N L+   C   +   A  +   M  R +A D  +    +   
Sbjct: 218 GLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGF 277

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C  EE+  A E+ G M     VP  A  S  + G  K    E+A R+  Q+    +V + 
Sbjct: 278 CRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNI 337

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y+ L+  +C+    +EA  +   MS  G   +  ++ ILI+ LC    +D A+ +   
Sbjct: 338 FAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDR 397

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G   T   Y  ++    K       +  L++M+  G   +  +Y  +I  +  +  
Sbjct: 398 MREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGD 457

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           L         M + G+  +  T  +L++G     ++   S   NK+   +   +   +N 
Sbjct: 458 LSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNA 517

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I G    G   +A  L D M+ +G  PD  T+  L+
Sbjct: 518 VIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLI 554



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 88/445 (19%), Positives = 186/445 (41%), Gaps = 21/445 (4%)

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
            A +Y  +I  L   G++     L + M ++          +L+  F    +++ A R+ 
Sbjct: 441 NAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLF 500

Query: 155 VNMNSGGFKLSVDVFNVVLGA---IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
             M     + +   FN V+     + + ++ F     +Y +M+  G+ P+  T   L+  
Sbjct: 501 NKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQ----LYDQMMCRGLTPDNYTYRSLISG 556

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L  T+    A +    +       N  +   ++ G     R+ ++  +  EM   G +L+
Sbjct: 557 LCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLD 616

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           L  +T I+    +++  E++  LF+ M+   + PD + +  +IN   +   +  A +  +
Sbjct: 617 LISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWD 676

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH--------NALLECC 383
           +MI  G  P    +  +V  LC+      +    E  C  + + H        N  L+  
Sbjct: 677 EMIADGHLPNTVTYTALVNNLCKSWHLSSA----ELLCKEMLASHFLPNSYTFNCFLDYF 732

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
              G    AK +   M    +A+  S N  I+  C+  +I++A +L+ R   +   PDC 
Sbjct: 733 ATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCI 792

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA-VEVFCC 502
           +YS  +   CK  +  +A+ ++ ++  + +  D ++Y+ L+   C +   ++  + ++  
Sbjct: 793 SYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIR-WCNIHGESDKCLGIYID 851

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRK 527
           M K G   +  +   L  G  +M K
Sbjct: 852 MVKKGVQPNWHTHRALFVGTSLMSK 876


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 245/534 (45%), Gaps = 23/534 (4%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V T N L+       R   A+D    M + G  P+  TF  ++  L     V ++  +
Sbjct: 280 PDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKL 339

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
              + D+GI    + Y  ++    +  ++ +A  L++ MR   + PD +T+  L+    +
Sbjct: 340 FDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYK 399

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--P 375
             R++D++ +L+D+IV GL     ++  +V  LC  G+ DE++  L++  + G   S   
Sbjct: 400 YGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVA 459

Query: 376 HNALLECCCNAG---KFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
            N+L+     AG   K F A  I+ +       + C+S    +  LC    +++A  LL 
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSL---LMGLCRKGWLQEARILLY 516

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           RM+      +   Y+  + G  K+ N E A  +++++  + +  D+++++ L++GL +  
Sbjct: 517 RMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAG 576

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EA EVF  MS  G   ++ ++N LI GLC   +V +A++L       G    T T+ 
Sbjct: 577 NVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFN 636

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I+ G  +  + K  +     M   G   D+  + ILI    +   +       N M   
Sbjct: 637 IIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSC 696

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           GL PD  T  + +HG     +++     +++L+S   V D+  YN +++G+  + +  +A
Sbjct: 697 GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRA 755

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSV-----------GEEIDSRRFAFDSSSF 714
             L   +L  G++P+  T  +L+               G+++    F FD  S+
Sbjct: 756 MILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISY 809



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 223/509 (43%), Gaps = 31/509 (6%)

Query: 157 MNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           M   G + SV  F  +L      G +VE ++       ++  +   GI PN    N L++
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARK-------LFDGIQDMGIAPNAAIYNTLMD 360

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
             F+   +  A   +  M   G  P+  TF I++ G     R++DS  +L ++   G+ L
Sbjct: 361 GYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFL 420

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           + S Y  ++  LC   +L+EA++L + +    L    + +  LI         D A +  
Sbjct: 421 DSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAY 480

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNA 386
             M+  G TP+      ++ GLC  G   E+       LE         +  LL+     
Sbjct: 481 RIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKM 540

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                A+ + ++M +R I  D  ++   I  L +   + +AYE+   M     VP+   Y
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           ++ + G C      +AL++ +++  + L+ D+ +++ +++G C+  ++  A+E F  M +
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G      +FNILI G C    +  A  + +  YS G     +TY   M G  ++++   
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV-MVKAGLVPDRETMLSLL 624
            +++L Q++  G   D   Y  ++  +   + + D A+     ++K G +P+  T   LL
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGIC--SDILDRAMILTAKLLKMGFIPNVITTNMLL 778

Query: 625 -----HGLAD-----GSQLHLVSSGINKL 643
                 G+ +     G +L  +S G +++
Sbjct: 779 SHFCKQGMPEKALIWGQKLREISFGFDEI 807



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/537 (22%), Positives = 214/537 (39%), Gaps = 66/537 (12%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           N   ++    V N +L   +    GF + + V + M   G+ P + ++  LL +L     
Sbjct: 169 NHAMYESDFSVLNTLLRGFLNVGMGF-EALEVLRMMRGVGVRPGLSSITILLRLLLRIGD 227

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
             S    F+ M  KG  P++ TF  +I G                               
Sbjct: 228 YGSVWKLFKDMIFKGPRPSNLTFNAMICGF------------------------------ 257

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
                CR++++     L  +M      PD +T+  LIN  C   R   A D L  M+  G
Sbjct: 258 -----CRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSG 312

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           + P+   F  I+  LC  G   E+    +       +P+ A+     +   +F A+    
Sbjct: 313 VEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDG--YFKAR---- 366

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                                   E+ +A  L   M  + V PDC T++  V G  K   
Sbjct: 367 ------------------------EVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGR 402

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            ED+ R+ + +    L LDS  Y  +V  LC   ++ EA+++   + + G +LS  +FN 
Sbjct: 403 IEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNS 462

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI         DKA     +    G + ++ST   +++GL +    ++  ++L +ML +G
Sbjct: 463 LIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKG 522

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
             ++  AY +L+    + N L+     +  M + G+ PD     +L+ GL+    +    
Sbjct: 523 FPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAY 582

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               ++ +   V ++  YN LI GL   G  ++A  L   M  KG + D  T  +++
Sbjct: 583 EVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIII 639



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 202/413 (48%), Gaps = 11/413 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV+    + R+  + R+L ++   G  L   +++V++ ++    R   + + + +E+++ 
Sbjct: 393 LVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGR-LDEAMKLLQELLEK 451

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+  +V   N L+         + A + +R M + G  P+S T   ++ GL     + ++
Sbjct: 452 GLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEA 511

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +L  M + G  +    YT ++    + N LE A  L+K M+   + PD + +  LI+ 
Sbjct: 512 RILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDG 571

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV-- 372
           L +   +++A ++  +M  IG  P +  +  ++RGLC+ G+  E++   ++  + G +  
Sbjct: 572 LSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSD 631

Query: 373 TSPHNALLECCCNAGKF-FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
           T   N +++  C  G+  F  +  L+      + D  ++NI I   C+  ++  A E++ 
Sbjct: 632 TFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVN 691

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +M    + PD  TY+ ++ G C++     A+ +  Q+ +  +V D+++Y+ ++ G+C  +
Sbjct: 692 KMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-D 750

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI----RLRSLAYS 540
            +  A+ +   + K G   +  + N+L+   C     +KA+    +LR +++ 
Sbjct: 751 ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFG 803



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 166/393 (42%), Gaps = 42/393 (10%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDT 204
           R++ AM++L  +   G  LSV  FN ++GA    + G  D  F  Y+ MV+ G  P+  T
Sbjct: 437 RLDEAMKLLQELLEKGLTLSVVAFNSLIGAY--SRAGLEDKAFEAYRIMVRCGFTPSSST 494

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N LL  L     ++ A     RM +KG   N   + +++ G    + ++ +  +  EM 
Sbjct: 495 CNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMK 554

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + GI  +   +T +I  L +   +EEA  +F  M A+  +P+   Y  LI  LC+  R+ 
Sbjct: 555 ERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVT 614

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV-NFLE-DKCGYVTS--PHNALL 380
           +A  + ++M   GL      F  I+ G C  G+   ++  FL+  + G +      N L+
Sbjct: 615 EALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILI 674

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
              C A     A  I+ KM    +  D  ++N  +   C   ++ +A  +L +++ + +V
Sbjct: 675 GGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIV 734

Query: 440 PDCATYSAFVLGKC-------------------------------KLCNY---EDALRVF 465
           PD  TY+  + G C                                 C     E AL   
Sbjct: 735 PDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWG 794

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           +++   S   D ISY  L +  C ++   E V 
Sbjct: 795 QKLREISFGFDEISYRILDQAYCLMQDDVELVR 827


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 186/410 (45%), Gaps = 28/410 (6%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +FN +L ++V+ KR +   + ++K+    GI P++ TL+ L+        I  A   F  
Sbjct: 60  LFNNILSSLVKNKR-YPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFAN 118

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + K+G  P++ T   +IKGL     +  ++    ++   G QL+   Y  +I  LC+  +
Sbjct: 119 ILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGE 178

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            +   RL + +    + PD + Y  +IN LC+N  L DA D+  +MIV G++P    +  
Sbjct: 179 TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTT 238

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           ++ G C +GK  E+ + L +      +P         +A         L K   +K+ D 
Sbjct: 239 LIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDA---------LGKEGKKKMVD- 288

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
                            +A  L   M   +++PD  TY++ + G CK  + E A+ + ++
Sbjct: 289 -----------------EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKE 331

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +    +  D  SY+ L++GLC+  ++  A E F  +   GC L+   +N++I GLC    
Sbjct: 332 MKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGL 391

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
             +A+ L+S     G      T+  I+  L +         +L +M+  G
Sbjct: 392 FGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARG 441



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 161/365 (44%), Gaps = 8/365 (2%)

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGK 388
           M+++   P   +F +I+  L +  ++   ++  +       +P     + L+ C C+   
Sbjct: 49  MLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAH 108

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
             LA  +   +  R    D  + N  I+ LC   EI+K      ++V      D  +Y  
Sbjct: 109 ITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGT 168

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G CK    +   R+ R++   S+  D + Y+ ++  LC+ + + +A +V+  M   G
Sbjct: 169 LINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 228

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK--- 564
            S    ++  LI+G C+M K+ +A  L +       +    T++ ++  L K  + K   
Sbjct: 229 ISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVD 288

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + + +  +M  +    D+  Y  LI  + + + L+        M + G+ PD  +   LL
Sbjct: 289 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILL 348

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
            GL  G +L +       L+     L+   YN++INGL K GL  +A  L   M GKG +
Sbjct: 349 DGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCM 408

Query: 685 PDATT 689
           P+A T
Sbjct: 409 PNAIT 413



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 162/371 (43%), Gaps = 18/371 (4%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  I+  L +  +    I LFK      + PD  T   LINC C    +  A  +  +++
Sbjct: 61  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCN 385
             G  P       +++GLC  G+  +++ F +         D+  Y T     L+   C 
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGT-----LINGLCK 175

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           AG+      +L K+    +  D   +N  I  LC+N+ +  A ++   M+V  + PD  T
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK---ITEAVEVFC 501
           Y+  + G C +   ++A  +  ++  +++  D  ++S L++ L +  K   + EA+ +F 
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M          ++N LI GLC    +++AI L       G      +YT ++ GL K  
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R +        +LV+GC L+V  Y ++I  + +     +     + M   G +P+  T  
Sbjct: 356 RLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFR 415

Query: 622 SLLHGLADGSQ 632
           +++  L++  +
Sbjct: 416 TIICALSEKDE 426



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/388 (20%), Positives = 168/388 (43%), Gaps = 8/388 (2%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P +  F  ++  L+ N R    +S+  +    GI  +L   + +I   C +  +  A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           F  +      PD +T   LI  LC    +       + ++  G       +  ++ GLC+
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDS 409
            G+       L    G+   P    +N ++   C       A  +  +M  + I+ D  +
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV--LGK-CKLCNYEDALRVFR 466
           +   I   C   ++++A+ LL  M + ++ PD  T+S  +  LGK  K    ++A+ +F 
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++  ++++ D ++Y+ L++GLC+   +  A+ +   M ++G      S+ IL+ GLC   
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           +++ A          G       Y  ++ GL K     + + + ++M  +GC  +   + 
Sbjct: 356 RLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFR 415

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            +I ++SE+++          M+  GL+
Sbjct: 416 TIICALSEKDENDKAEKILREMIARGLL 443



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 3/240 (1%)

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           Y   + +F+Q     +  D  + S L+   C    IT A  VF  + K G    + + N 
Sbjct: 74  YPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNT 133

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI GLC   ++ K +       + G      +Y  ++ GL K    K +  +L ++    
Sbjct: 134 LIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHS 193

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              DV  Y  +I S+ +   L D    ++ M+  G+ PD  T  +L+HG     ++    
Sbjct: 194 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAF 253

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEG---LTSQASYLLDLMLGKGWVPDATTHGLLV 694
           S +N++   +   D   +++LI+ L KEG   +  +A  L + M  K  +PD  T+  L+
Sbjct: 254 SLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 313



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 2/205 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE--KRGFADFVFVYKEM 193
           +L+  F    ++  A  +L  M        V  F+V++ A+ +E  K+   + + +++EM
Sbjct: 238 TLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEM 297

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
               ++P++ T N L++ L + + +E A+   + M + G  P+  ++ I++ GL    R+
Sbjct: 298 KHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRL 357

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           + +      +   G  L +  Y  +I  LC+     EA+ L   M     MP+ +T+  +
Sbjct: 358 EIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTI 417

Query: 314 INCLCENLRLDDANDILEDMIVIGL 338
           I  L E    D A  IL +MI  GL
Sbjct: 418 ICALSEKDENDKAEKILREMIARGL 442



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 64/150 (42%)

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
           T  +  I+  LVK +R   ++ +  Q    G   D+    ILI     Q  +      F 
Sbjct: 58  TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 117

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            ++K G  PD  T+ +L+ GL    ++       +++V+    LD   Y  LINGL K G
Sbjct: 118 NILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAG 177

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            T   + LL  + G    PD   +  ++ S
Sbjct: 178 ETKAVARLLRKLEGHSVKPDVVMYNTIINS 207


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 257/575 (44%), Gaps = 57/575 (9%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           GG      V+N +L A + E R   D V  +YK+++ AG  P+V T N LLE L    R+
Sbjct: 102 GGAAPPTPVYNRLLLAALREDR--LDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRM 159

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           + A   F  M  +    N  +  I+ +G     R  D++++L  M     ++ L     +
Sbjct: 160 DLARRVFDAMPAR----NEFSSGILARGYCRAGRSADALAVLDAM----PEMNLVVCNTV 211

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI-- 336
           +   CRE +++EA RL   MRA  L P+ +T+   I+ LC+  R+ +A  I  DM     
Sbjct: 212 VAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWE 271

Query: 337 -GLTPTDDVFVDI-VRGLCEVGKFDESVNFLE-DKCGYV---TSPHNALLECCCNAGKFF 390
            GL   D V  D+ + G C+ G  DE+   ++  +CG        +N  L      G+  
Sbjct: 272 QGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVG 331

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENE---EIRKAYELLGRMVVSSVVPDCATYS 446
            A+ +L +MA   +  +  ++NI +  LC+     ++R+  + +   V++   PD  TY+
Sbjct: 332 EAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMT---PDVVTYT 388

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + +   C   N   A R+  +++ +    +  +Y+ L++ L +  + TE   +   MS+ 
Sbjct: 389 SLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEK 448

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKA------------IRLRSLAYS-----SGTSYTTS- 548
           G SL ++S NI+I GLC   K++ A            + LR L  S     S +S + S 
Sbjct: 449 GYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSC 508

Query: 549 -----TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TY+ +M  L K  R  +    L +M+ +  + D   Y   I       K      
Sbjct: 509 LPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIK 568

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNILI 659
               M K    P   +   L+ G  +  +    L L+S    K +S S V+    YN LI
Sbjct: 569 VLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGIS-SNVM---TYNSLI 624

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 G+ ++A  LLD ML    VP+ T+ GLL+
Sbjct: 625 KSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLI 659



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 134/574 (23%), Positives = 238/574 (41%), Gaps = 45/574 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFV 189
           ++V  F    RV+ A R++  M + G   +V  FN  +      G ++E  R F D    
Sbjct: 210 TVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEA 269

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +++ +     P+  T + +L    +   ++ A      M   G      ++   + GL+ 
Sbjct: 270 WEQGLPR---PDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVK 326

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           N RV ++  +L EM   G+Q     Y  I+  LC+E K  +  R+   +R+  + PD +T
Sbjct: 327 NGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVT 386

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--D 367
           Y  L++  C       AN IL++M   G  P    +  +++ L + G+  E    LE   
Sbjct: 387 YTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMS 446

Query: 368 KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRK 425
           + GY   T+  N +++  C   K  +A  I++ M          WN          E R 
Sbjct: 447 EKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGM----------WN----------EGRL 486

Query: 426 AYELLGRMVVS---------SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           A   LG   VS         S +PD  TYS  +   CK   +++A +   ++  + +  D
Sbjct: 487 ALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPD 546

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           S+ Y   + G C   K + A++V   M K  C+ S+ S+N+LI+G    +K D+ ++L S
Sbjct: 547 SVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMS 606

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G S    TY  ++            + +L +ML      +V ++ +LI++  +  
Sbjct: 607 EMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTA 666

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMY 655
                   F+V +       +E +  L+          + +  I +   +  + + S  Y
Sbjct: 667 DFSAAQRVFDVALST--CGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPY 724

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             +I GL        A  LL L + KG+  D  T
Sbjct: 725 KRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPAT 758



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/494 (20%), Positives = 196/494 (39%), Gaps = 95/494 (19%)

Query: 105 KLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
           K G A +V  +E   ++ V    P+V     SL+ ++ +      A R+L  M   G   
Sbjct: 361 KEGKAFDVRRVEDFVRSGVMT--PDV-VTYTSLLHAYCSKGNTTAANRILDEMAQKGCAP 417

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           ++  +NV+L                 + ++KAG    V+ L                   
Sbjct: 418 NLFTYNVLL-----------------QSLLKAGRTTEVERL------------------- 441

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG----IQLELSF------ 274
             RM +KG   ++ +  I+I GL  NS+++ ++ I+  M++ G     +L  SF      
Sbjct: 442 LERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSD 501

Query: 275 -------------YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
                        Y+ ++  LC+E + +EA +    M   D+ PD + Y+  I+  C + 
Sbjct: 502 SSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHG 561

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           +   A  +L DM      P+   +  ++ G  E  K DE +                   
Sbjct: 562 KTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILK------------------ 603

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                        ++ +M ++ I ++  ++N  I+  C    + KA  LL  M+ + +VP
Sbjct: 604 -------------LMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVP 650

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +  ++   +   CK  ++  A RVF  V+  +     + Y  +   L    +  EA  + 
Sbjct: 651 NVTSFGLLIKAFCKTADFSAAQRVF-DVALSTCGQKEVLYCLMCTELSTYARWIEAKNIL 709

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
               +   S+ S  +  +I GLC + + D A  L  L  + G S+  +T+  ++  L + 
Sbjct: 710 ETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSES 769

Query: 561 QRAKDLLVVLAQML 574
            +  D  ++  +M+
Sbjct: 770 GKKHDADMLSEKMM 783


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 193/440 (43%), Gaps = 35/440 (7%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +K+M+ AG  P V T N +++ + +   IE+A   F  M  +G  P++ T+  +I G   
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             R+DD+V    EM  +  + ++  Y  +I   C+  KL + +  F+ M+   L P+ ++
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++  C+   +  A     DM  +GL P +  +  +V   C++G   ++   L D+ 
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFR-LADEM 299

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
             V    N +                             ++   I  LC+ E I++A EL
Sbjct: 300 SQVGVEWNVV-----------------------------TYTALIDGLCDVERIKEAEEL 330

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
            G+MV + V+P+ A+Y+A + G  K  N + AL +  ++  + +  D + Y   +  LC 
Sbjct: 331 FGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCG 390

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           +EKI  A  V   M + G   ++  +  L+          + + L           T  T
Sbjct: 391 LEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVT 450

Query: 550 YTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
           +  ++ GL K   + +A D    ++     G   +   Y  +I  + ++++++     F 
Sbjct: 451 FCVLIDGLCKNKLVSKAIDYFGRISNDF--GLQANAAIYTAMIDGLCKEDQVEAATTLFE 508

Query: 607 VMVKAGLVPDRETMLSLLHG 626
            M + GLVPDR    SL+ G
Sbjct: 509 QMAQKGLVPDRTAYTSLIDG 528



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 136/565 (24%), Positives = 239/565 (42%), Gaps = 66/565 (11%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV--KAGI---------------- 198
           MN  GFK +++ + +V   I+   R + D   + +EMV  KA +                
Sbjct: 1   MNRNGFKHTIESYCIV-AHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVC 59

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VP     + L  VL E +  E AL  F +M +    P +R+      GL+          
Sbjct: 60  VPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRS----CNGLLHK-------- 107

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
                                    R  K +   R FK M      P   TY  +I+C+C
Sbjct: 108 -----------------------FARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMC 144

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
           +   ++ A+ + E+M   GL P    +  ++ G  +VG+ D++V F E+       P   
Sbjct: 145 KEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI 204

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM 433
            +N L+ C C  GK         +M    +  +  S++  +   C+ + +++A +    M
Sbjct: 205 TYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDM 264

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
               +VP+  TY++ V   CK+ N  DA R+  ++S   +  + ++Y+ L++GLC VE+I
Sbjct: 265 RRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERI 324

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            EA E+F  M   G   + +S+  LI+G    + +D+A+ L       G       Y   
Sbjct: 325 KEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTF 384

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           +  L  L++ +   VV+ +M  +G   +   Y  L+ +  +     +       M++  +
Sbjct: 385 IWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDI 444

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKL--VSDSEVL--DSSMYNILINGLWKEGLTS 669
                T   L+ GL       LVS  I+    +S+   L  ++++Y  +I+GL KE    
Sbjct: 445 EVTAVTFCVLIDGLCKNK---LVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVE 501

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
            A+ L + M  KG VPD T +  L+
Sbjct: 502 AATTLFEQMAQKGLVPDRTAYTSLI 526



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/488 (21%), Positives = 208/488 (42%), Gaps = 33/488 (6%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           +P  R +   L+  F    + +G  R   +M   G K +V  +N+++  + +E       
Sbjct: 95  FPKTR-SCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEG-DIEAA 152

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
             +++EM   G++P+  T N +++   +  R++  +  F  M    C P+  T+  +I  
Sbjct: 153 SGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINC 212

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                ++   +    EM   G++  +  Y+ ++   C+E+ +++A++ +  MR L L+P+
Sbjct: 213 FCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPN 272

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           E TY  L++  C+   L DA  + ++M  +G+      +  ++ GLC+V +  E+     
Sbjct: 273 EHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELF- 331

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
                               GK   A           I +  S+   I    + + + +A
Sbjct: 332 --------------------GKMVTAGV---------IPNLASYTALIHGFVKAKNMDRA 362

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            ELL  M    + PD   Y  F+   C L   E A  V  ++  + +  ++  Y+ L++ 
Sbjct: 363 LELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDA 422

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI-RLRSLAYSSGTSY 545
             + E  +E + +   M +    +++ +F +LI GLC  + V KAI     ++   G   
Sbjct: 423 YFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQA 482

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
             + YT ++ GL K  + +    +  QM  +G   D  AY  LI    +Q  +       
Sbjct: 483 NAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALR 542

Query: 606 NVMVKAGL 613
           + M + G+
Sbjct: 543 DKMAEIGV 550



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 1/275 (0%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+ +   P   TY+  +   CK  + E A  +F ++  + L+ D+++Y+ +++G  +V +
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + + V  F  M    C     ++N LI   C   K+ K +        SG      +Y+ 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++    K    +  L     M   G   +   Y  L+ +  +   L D     + M + G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           +  +  T  +L+ GL D  ++        K+V+   + + + Y  LI+G  K     +A 
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 673 YLLDLMLGKGWVPDATTHGLLVGSSVG-EEIDSRR 706
            LLD M G+G  PD   +G  + S  G E+I++ +
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAK 398



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 63/163 (38%)

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
           T +   ++    +L +   +      M+  G    V  Y I+I  M ++  ++  +  F 
Sbjct: 98  TRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFE 157

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   GL+PD  T  S++ G     +L        ++ S S   D   YN LIN   K G
Sbjct: 158 EMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFG 217

Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
              +       M   G  P+  ++  LV +   E++  +   F
Sbjct: 218 KLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKF 260


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 208/443 (46%), Gaps = 10/443 (2%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVS-IQKRFQHTADTYCKMILKLGLAGNV 112
           I+     L P  LI ++ +  +L  A +IF +       F HT DTY  +I KL  A   
Sbjct: 6   IKPWPQRLYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAF 65

Query: 113 EEMEGLCQNMVKERYPNVR---EALISLVFSFVNHYRVNGAMRVLVNMNSG-GFKLSVDV 168
           + +E L   + +    +++   +  IS++ ++    R   A++    +      + SV +
Sbjct: 66  DGVESLLSQLSRNS-SHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKL 124

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
            N +L   V+ KR       +     K G++PNV + N L++ L + N +E+AL  F  M
Sbjct: 125 LNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEM 184

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G  PN  T+  ++ G ++   + ++  +  E+ D G   + + YT ++   C++ +L
Sbjct: 185 PTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRL 244

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +AI++   M    + P+E+TY  +I+  C+  +  +A ++++DM+     P+  +   +
Sbjct: 245 SDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKV 304

Query: 349 VRGLCEVGKFDESVNF----LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  LCE GK + + +     LE  C    +  + L+   C  GK + A+ + ++     I
Sbjct: 305 IDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTI 364

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
               ++N  I  +CE  E+ +A  L   MV     P+  TY+  + G  K    ++ +R+
Sbjct: 365 PSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRI 424

Query: 465 FRQVSAQSLVLDSISYSKLVEGL 487
             ++     + +  +Y+ L+EGL
Sbjct: 425 LEEMLDNGCLPNKSTYTLLIEGL 447



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 168/360 (46%), Gaps = 8/360 (2%)

Query: 342 DDVFVDIVRGLCEVGKFDESV-NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCIL 396
           DDVF+ ++R     G+   ++  F   K  +   P     N LL       ++ L    L
Sbjct: 86  DDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTL 145

Query: 397 EKMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +   D+   + +  S+NI I+ LC+  ++  A ++   M    ++P+  TY+  + G   
Sbjct: 146 KNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVS 205

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             +  +A +VF ++S +  + D+ +Y+ L+ G C+  ++++A++V   M  NG   +  +
Sbjct: 206 RGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVT 265

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           + ++I   C  +K  +A  L           +++   K++  L +  + ++   +  +ML
Sbjct: 266 YGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRML 325

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            + C  D      LI  + ++ K+ +    F+   + G +P   T  +L+ G+ +  +L+
Sbjct: 326 EKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELN 384

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                 + +V      ++  YN+LI G  K G+  +   +L+ ML  G +P+ +T+ LL+
Sbjct: 385 EAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLI 444



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/359 (18%), Positives = 150/359 (41%), Gaps = 34/359 (9%)

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           ++P+  ++  LI  LC+   +++A  + ++M  +G+ P    +  I+ G    G      
Sbjct: 154 VLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDL---- 209

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
                                 NA K F       +++D+  + D  ++ + +   C+  
Sbjct: 210 ---------------------VNAEKVF------SEISDKGWLPDATTYTVLMVGYCKQG 242

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A +++  M  + V P+  TY   +   CK     +A  +   +  +  +  S    
Sbjct: 243 RLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCC 302

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           K+++ LC+  K+  A  ++  M +  C   ++  + LI+ LC   KV +A +L    +  
Sbjct: 303 KVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFD-EFEQ 361

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           GT  +  TY  ++ G+ +     +   +   M+ + C  +   Y +LI+   +   +K+ 
Sbjct: 362 GTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEG 421

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                 M+  G +P++ T   L+ GL +      V   ++  ++  EV D+  +++ ++
Sbjct: 422 VRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMASREV-DADSWDLFLH 479



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 64/125 (51%)

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   +V ++ ILI+++ ++N +++    F+ M   G++P+  T  ++L G      L   
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               +++     + D++ Y +L+ G  K+G  S A  ++D M   G  P+  T+G+++ +
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDA 272

Query: 697 SVGEE 701
              E+
Sbjct: 273 YCKEK 277


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/488 (22%), Positives = 226/488 (46%), Gaps = 14/488 (2%)

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K G  P++ T    IKG     ++  ++    ++  +G  L+   Y  +I  LC+  + +
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
            A+ L +      + PD + Y  +I+ +C++  ++DA D+  + +   + P    +  ++
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI- 404
            G C VGK  ++++           P     + L++  C  G    AK +L  M  + I 
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  +++  +   C   E+ KA  +   M    V  +  +Y+  + G CK+   ++A+++
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F+++  + +  D I+YS L++GLC+  +I+ A+E+   M   G      ++N ++  LC 
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              VDKAI L +     G     +TYT ++ GL +  + +D   V   +LV+G  LDV A
Sbjct: 556 KHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYA 615

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y ++IQ   ++    +     + M + G +PD +T   ++  L +  +  +    + +++
Sbjct: 616 YTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675

Query: 645 SDS---EVLDSSMYNILINGLWKEGLTSQASYLLDLM----LGKGWVPDATTHGLLVGSS 697
                  + D  + +IL+   W   L    +++  L+    L  G+  D +  G  V ++
Sbjct: 676 MRGLLVALTDDLVASILVRRTWCARLALWVTFISLLLRVIELKPGF--DISDEGKAVVAA 733

Query: 698 VGEEIDSR 705
             E +DS+
Sbjct: 734 GQERLDSK 741



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 190/428 (44%), Gaps = 5/428 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +++K G  P+  TL   ++      +I  AL    ++   G   +  ++  +I GL    
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
               ++ +L       +Q ++  Y  II  +C++  + +A  L+    +  + PD  TY 
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+  C   +L DA D+   M    + P    F  +V G C+ G   E+ N L      
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
              P    +++L++  C   +   A+ I   M+ R + A+  S+NI I   C+ + + +A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +L   M    + PD  TYS+ + G CK      AL +  ++  +    D I+Y+ +++ 
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+   + +A+ +   +   G     +++ IL+ GLC   K++ A ++       G +  
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              YT ++ G        + L +L++M   GC  D + Y I+I S+ E+++         
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLR 672

Query: 607 VMVKAGLV 614
            M+  GL+
Sbjct: 673 EMIMRGLL 680



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 5/280 (1%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYR 146
           + KR      TY  +I    + G +++   L   M  K   P+V    I LV  F     
Sbjct: 360 VSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSI-LVDGFCKDGN 418

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +  A  VL  M     K  V  ++ ++ G  +  +   A+ +F    M   G+  NV + 
Sbjct: 419 IKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF--NTMSHRGVTANVQSY 476

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N ++    +   ++ A+  F+ MH K   P+  T+  +I GL  + R+  ++ ++ EM  
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHY 536

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G Q ++  Y  I+  LC+++ +++AI L   ++   + PD  TY  L+  LC++ +L+D
Sbjct: 537 RGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLED 596

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           A  + ED++V G       +  +++G C+ G FDE++  L
Sbjct: 597 ARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALL 636



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 8/276 (2%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           F    D +CK        GN++E + +   M+K+          SL+  +     VN A 
Sbjct: 406 FSILVDGFCK-------DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAE 458

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            +   M+  G   +V  +N+++    + K    + + ++KEM    I P+V T + L++ 
Sbjct: 459 SIFNTMSHRGVTANVQSYNIMINGFCKIKM-VDEAMKLFKEMHHKQIFPDVITYSSLIDG 517

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L ++ RI  AL+    MH +G  P+  T+  ++  L     VD ++++L ++   GI+ +
Sbjct: 518 LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           ++ YT ++  LC+  KLE+A ++F+ +       D   Y  +I   C+    D+A  +L 
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLS 637

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            M   G  P    +  I+  L E  + D +   L +
Sbjct: 638 KMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLRE 673



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 5/114 (4%)

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           ++K G  PD  T+ + + G     Q+H      +K+++    LD   Y  LINGL K G 
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 668 TSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGEEIDSRRFAFDSSSFPD 716
           T  A  LL    GK   PD   +     G+     V +  D          FPD
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPD 367


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 213/508 (41%), Gaps = 45/508 (8%)

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           AG VP     N L++ L ++ R++ A+    RM +    P+  TF I+I GL  + R  +
Sbjct: 264 AGAVP----YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGE 319

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             ++L EM  LGI         +I   CR+    EAIRLF  M + ++    +TY  +  
Sbjct: 320 VGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIAR 379

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE-VGKFDESVNFLEDKCGYVTS 374
            LC+   ++ A  ILE+M+  G+T    +F  +V GL +  G+ +  V  + +       
Sbjct: 380 ALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMK 439

Query: 375 PHNALLECC---------------------------------------CNAGKFFLAKCI 395
           P++AL+  C                                       C       A  +
Sbjct: 440 PNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEV 499

Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L  M ++ +  D  ++NI I+  C++ +I +A +L   M+     PD   +++ +   C 
Sbjct: 500 LRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCD 559

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L   E+AL +  Q+  + +  D +SY  +++G C+ + I +A E    +   G   ++  
Sbjct: 560 LGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LI G      +  AI +     S G   T  TY  +M  +       +   +  Q  
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSR 679

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
                + V  Y I+IQ + +  K+ +   +F  M    + P++ T  +L++         
Sbjct: 680 KNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNE 739

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGL 662
             S   +++VS   V D+  YN L+ G 
Sbjct: 740 EASKLFDEMVSSGIVPDNVSYNTLVTGF 767



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/535 (21%), Positives = 227/535 (42%), Gaps = 55/535 (10%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           G  +L+VD F+V+       +R                  P+V T N LLE L  T  + 
Sbjct: 172 GSLRLAVDAFHVL-----SSRRA----------------SPSVKTCNALLEALARTGNLG 210

Query: 220 SALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF--YT 276
           +    F  M   K   PN  ++  +IK L    +VDD   IL ++   G+Q       Y 
Sbjct: 211 ATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYN 270

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  LC+  +++EAIRL   M    + P  +T+  LIN L  + R  +   +L +M  +
Sbjct: 271 LLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGL 330

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+TP + +  +++   C  G F E++   ++                           + 
Sbjct: 331 GITPNEVICNELIDWHCRKGHFTEAIRLFDE--------------------------MVS 364

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC-KL 455
           ++M    +    ++N+  R LC+  E+ +A  +L  M+ + +      +++ V G   + 
Sbjct: 365 KEMKSTAV----TYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRT 420

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E  +R+  ++  + +  +    +   + LCQ  +  EAV ++  M + G  ++ ++ 
Sbjct: 421 GRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATS 480

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           N LI+GLC  + +  A  +     + G      TY  ++ G  K  + ++ L +   M+ 
Sbjct: 481 NALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIR 540

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +G   D   +  +I +  +  K+++       M   G+ PD  +  +++ G      +  
Sbjct: 541 KGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQK 600

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +  +N+L++     ++ +YN LI G  + G  S A  +LD M   G  P   T+
Sbjct: 601 ANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY 655



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 181/403 (44%), Gaps = 44/403 (10%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A R+L  M S G  +   +FN V+  +++        V +  EMVK G+ PN   +    
Sbjct: 390 AERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACT 449

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           + L +  R + A+  + +M +KG C N  T   +I GL     +  +  +L  M + G++
Sbjct: 450 KQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGME 509

Query: 270 LELSFYTCIIPMLCRENKLEEAIR--------------------------LFKMMRALDL 303
           L+   Y  +I   C+++K+EEA++                          L KM  AL L
Sbjct: 510 LDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHL 569

Query: 304 M---------PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           +         PD ++Y  +I+  C+   +  AN+ L +++  GL P   ++  ++ G   
Sbjct: 570 LGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGR 629

Query: 355 VGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDS 409
            G    ++  L+        P N    +L+   C+AG    AK + E+     I      
Sbjct: 630 NGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVG 689

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           + I I+ LC+  ++ +A      M   S+ P+  TY+  +   CK  N E+A ++F ++ 
Sbjct: 690 YTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMV 749

Query: 470 AQSLVLDSISYSKLVEGLCQVEK----ITEAVEVFCCMSKNGC 508
           +  +V D++SY+ LV G  QV+     I +A E+   M++N C
Sbjct: 750 SSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDC 792



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/485 (20%), Positives = 204/485 (42%), Gaps = 44/485 (9%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF-YTCII 279
           A+D F  +  +   P+ +T   +++ L     +  +  +  EM D        + YT +I
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI 236

Query: 280 PMLCRENKLEEAIRLFK--MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
             LC+  K+++  ++    +   L      + Y  L++ LC++ R+D+A  +   M    
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR 296

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAK 393
           + P+   F  ++ GL    +F E    L +  G   +P+    N L++  C  G F  A 
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAI 356

Query: 394 CILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + ++M  +++     ++N+  R LC+  E+ +A  +L  M+ + +      +++ V G 
Sbjct: 357 RLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGL 416

Query: 453 C-KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             +    E  +R+  ++  + +  +    +   + LCQ  +  EAV ++  M + G  ++
Sbjct: 417 LQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCIN 476

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            ++ N LI+GLC  + +  A                                     VL 
Sbjct: 477 IATSNALIHGLCEGKNMKGATE-----------------------------------VLR 501

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M+ +G  LD   Y I+IQ   + +K+++     + M++ G  PD     S++H   D  
Sbjct: 502 TMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLG 561

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           ++      + ++  +    D   Y  +I+G  K     +A+  L+ ++  G  P+A  + 
Sbjct: 562 KMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYN 621

Query: 692 LLVGS 696
            L+G 
Sbjct: 622 ALIGG 626


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 231/509 (45%), Gaps = 48/509 (9%)

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKG 246
           F+   ++ +G++P   +L  +L ++  + RI S+L  Q  + H   C   +  ++ ++  
Sbjct: 43  FILNHLLSSGMLPQAQSL--ILRLI--SGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNA 98

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
            + +   D +++ L  M   G     + +  ++ +L R N  ++A  +F  +++      
Sbjct: 99  YVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKS------ 152

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
                                 ++ D    G+         +++G CE G F +    L 
Sbjct: 153 ---------------------KVVLDAYSFGI---------MIKGCCEAGYFVKGFRLLA 182

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCEN 420
               +  SP    +  L++ CC  G   LAK +  KM DR   + +  ++++ +    + 
Sbjct: 183 MLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKM-DRLGLVPNPHTYSVLMNGFFKQ 241

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
              R+ +++   M  S +VP+   Y+  +   C     + A +VF ++  + +    ++Y
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTY 301

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+ GLC+ +K  EAV++   ++K G S +  ++NILI G C + K+D A+RL +   S
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKS 361

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           SG S T  TY  ++ G  K++     L ++ +M     A     Y ILI + +  N  + 
Sbjct: 362 SGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEK 421

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                ++M K+GLVPD  T   L+HGL     +   S     L       +S +YN +I+
Sbjct: 422 ACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIH 481

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           G  KEG + +A  LL+ M+  G VP+  +
Sbjct: 482 GYCKEGSSYRALRLLNEMVHSGMVPNVAS 510



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 5/362 (1%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ PNV     L++   +   +  A + F +M + G  PN  T+ +++ G        + 
Sbjct: 188 GLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREG 247

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +   M   GI      Y C+I   C    +++A ++F  MR   +    +TY  LI  
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC   +  +A  ++  +  +GL+P    +  ++ G C+VGK D +V           SP 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLG 431
              +N L+           A  ++++M +R IA    ++ I I          KA E+  
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHS 427

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M  S +VPD  TYS  + G C   N ++A ++F+ +    L  +S+ Y+ ++ G C+  
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
               A+ +   M  +G   + +SF   I  LC   K  +A  L     +SG   + S Y 
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547

Query: 552 KI 553
            +
Sbjct: 548 MV 549



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 153/365 (41%), Gaps = 48/365 (13%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKE--------RYPNVREALI--------SLVFS 140
           + +CKM  +LGL  N      L     K+         Y N++ + I         L+  
Sbjct: 214 NLFCKMD-RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272

Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
           + N   V+ A +V   M   G    V  +N+++G +   K+ F + V +  ++ K G+ P
Sbjct: 273 YCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK-FGEAVKLVHKVNKVGLSP 331

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N+ T N L+    +  ++++A+  F ++   G  P   T+  +I G      +  ++ ++
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM +  I      YT +I    R N  E+A  +  +M    L+PD  TY  LI+ LC +
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVH 451

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
             + +A+ + + +  + L P   ++  ++ G C+ G    ++  L               
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN-------------- 497

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                           E +    + +  S+   I  LC +E+ ++A  LLG+M+ S + P
Sbjct: 498 ----------------EMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKP 541

Query: 441 DCATY 445
             + Y
Sbjct: 542 SVSLY 546


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 193/404 (47%), Gaps = 5/404 (1%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM   G+ PN+ T N ++ +L ++ +++ A    R M  +G  P++  +  +I G    
Sbjct: 34  QEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKL 93

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             +  +  +  EM    I  +   YT +I  LCR  K+ EA ++F  M +  + PDE+TY
Sbjct: 94  GNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTY 153

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LI+  C++  ++ A  +   M+  GLTP    +  +  GLC++G+ D +   L + CG
Sbjct: 154 TTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCG 213

Query: 371 YVTS----PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
                    +N+L+   C +G    A  ++E+M    +  D  ++   +   C+  E+ K
Sbjct: 214 KGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVK 273

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A+ELL  M+   + P   T++  + G C     ED  R+   +  + ++ ++ +Y+ L++
Sbjct: 274 AHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMK 333

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C    +    E++  M   G    S+++NILI G C  R + +A  L       G + 
Sbjct: 334 QYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNL 393

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           T S+Y  I+ G  K ++  +   +  +M  EG A D E Y + +
Sbjct: 394 TASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV 437



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 196/431 (45%), Gaps = 5/431 (1%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y+ +I   C   +L++ ++L + M+   L P+  TY  +I  LC++ ++DDA  +L +MI
Sbjct: 13  YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G+ P   V+  ++ G C++G    +    ++       P    + A++   C  GK  
Sbjct: 73  NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +  KM  R +  D  ++   I   C++ E+ KA+ L  +MV S + P+  TY+A  
Sbjct: 133 EADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALA 192

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G CKL   + A  +  ++  + L L+  +Y+ LV GLC+   I +AV++   M   G  
Sbjct: 193 DGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMY 252

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
             + +F  L+   C   ++ KA  L       G   T  T+  +M G       +D   +
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           LA ML +G   +   Y  L++    +N ++     +  M   G++PD  T   L+ G   
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              +        ++      L +S YN +I G +K+   S+A  L + M  +G   DA  
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEI 432

Query: 690 HGLLVGSSVGE 700
           + L V  S GE
Sbjct: 433 YNLFVDISYGE 443



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/446 (22%), Positives = 197/446 (44%), Gaps = 34/446 (7%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           +L   LK+ + + + K  +    TY  +IL L  +G V++ E + + M+ +         
Sbjct: 25  ELQKVLKLIQEMQM-KGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY 83

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEM 193
            +L+  F     +  A ++   M           +  V+  +    K   AD VF   +M
Sbjct: 84  TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVF--NKM 141

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
              G+ P+  T   L++   ++  +E A     +M + G  PN  T+  +  GL    +V
Sbjct: 142 FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQV 201

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           D +  +L EM   G+QL +  Y  ++  LC+   + +A++L + M    + PD +T+  L
Sbjct: 202 DTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTL 261

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           ++  C+   +  A+++L +M+  GL PT   F  ++ G C  G  ++    L        
Sbjct: 262 MDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLL-------- 313

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
                          + L K I+         +  ++N  ++  C    +R   E+   M
Sbjct: 314 --------------AWMLEKGIM--------PNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
               V+PD  TY+  + G CK  N ++A  + ++++ +   L + SY+ +++G  + +KI
Sbjct: 352 CARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKI 411

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILI 519
           +EA E+F  M + G +  +  +N+ +
Sbjct: 412 SEARELFEEMRREGMAADAEIYNLFV 437



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 35/324 (10%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  S++  I   C   E++K  +L+  M +  + P+  TY++ +L  CK    +DA RV 
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 466 RQVSAQSLVLDSISYSKLVE-----------------------------------GLCQV 490
           R++  Q +V D++ Y+ L++                                   GLC+ 
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+ EA +VF  M   G      ++  LI G C   +++KA  L +    SG +    TY
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
           T +  GL KL +      +L +M  +G  L++  Y  L+  + +   ++        M  
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           AG+ PD  T  +L+       ++      + +++          +N+L+NG    G+   
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
              LL  ML KG +P+ TT+  L+
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLM 332


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 239/541 (44%), Gaps = 41/541 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G+  SV  +N VL A+ +     A   F    M+  G+ PNV T N L+  L      + 
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRFF--DSMLSDGVAPNVYTYNILVRALCGRGHRKE 175

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL   R M   GC PN+ T+  ++        VD +  ++  M + G++  L  +  ++ 
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            +C+  ++E+A ++F  M    L PD ++Y  L+   C+     +A  +  +M   G+ P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKC 394
               F  ++  +C+ G  + +V  + +      +   +T    AL++  C  G  FL   
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEIT--FTALIDGFCKKG--FLDDA 351

Query: 395 ILEKMADRKIADCD------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           +L   A R++  C        +N  I   C    + +A EL+  M    V PD  TYS  
Sbjct: 352 LL---AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTI 408

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +   CK  +   A ++ +Q+    ++ D+I+YS L+  LC+ +++ +A  +F  M   G 
Sbjct: 409 LSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGL 468

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                ++  LI G C    V++A+ L      +G      TY+ ++ GL K  R K    
Sbjct: 469 QPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTK---- 524

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
                         EA  +L +   E+    +  + ++ +++     + +++L+LL G  
Sbjct: 525 --------------EAQRLLFKLYHEEPVPAN--IKYDALMRCCRNAELKSVLALLKGFC 568

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
               ++        ++  +  LD S+Y++LI+G  +EG   +A      ML  G+ P++T
Sbjct: 569 MKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNST 628

Query: 689 T 689
           +
Sbjct: 629 S 629



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/530 (22%), Positives = 213/530 (40%), Gaps = 81/530 (15%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-------------- 181
           +LV +F     V+ A R++  M  GG K ++  FN V+  I +  R              
Sbjct: 197 TLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKE 256

Query: 182 GFA--------------------DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           G A                    + + V+ EM + GI+P+V T   L+ V+ +   +E A
Sbjct: 257 GLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERA 316

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +   R M ++G   N  TF  +I G      +DD++  + EM    IQ  +  Y  +I  
Sbjct: 317 VGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALING 376

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
            C   +++EA  L + M A  + PD +TY  +++  C+N     A  + + M+  G+ P 
Sbjct: 377 YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPD 436

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              +  ++R LCE  +  ++    ++       P                          
Sbjct: 437 AITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP-------------------------- 470

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
               D  ++   I   C+   + +A  L   MV + V+PD  TYS  + G  K    ++A
Sbjct: 471 ----DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEA 526

Query: 462 LRVFRQVSAQSLVLDSISYS---------------KLVEGLCQVEKITEAVEVFCCMSKN 506
            R+  ++  +  V  +I Y                 L++G C    + EA +V+  +   
Sbjct: 527 QRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDR 586

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
             +L  S +++LI+G C    V KA+         G +  +++   ++ GL +     + 
Sbjct: 587 NWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEA 646

Query: 567 LVVLAQMLVEGCAL-DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
             V+ Q+L   C+L D EA   LI    ++  +       + M + GL+P
Sbjct: 647 DQVIQQLL-NCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 176/444 (39%), Gaps = 72/444 (16%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P  L Y  ++  L  +  L  A    + M+  G+ P    +  +VR LC  G   E+++ 
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           L D  G    P NA+                             ++N  +   C   E+ 
Sbjct: 180 LRDMRGAGCDP-NAV-----------------------------TYNTLVAAFCRAGEVD 209

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  L+  M    + P+  T+++ V G CK    EDA +VF ++  + L  D +SY+ LV
Sbjct: 210 RAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLV 269

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G C+V    EA+ VF  M++ G      +F  LI+ +C    +++A+ L       G  
Sbjct: 270 GGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQ 329

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD---------VEAYCI-------- 587
               T+T ++ G  K     D L+ + +M    C +          +  YC+        
Sbjct: 330 MNEITFTALIDGFCKKGFLDDALLAVREM--RQCRIQPSVVCYNALINGYCMVGRMDEAR 387

Query: 588 -LIQSMSEQNKLKDCALFFNV-------------------MVKAGLVPDRETMLSLLHGL 627
            L++ M  +    D   +  +                   M++ G++PD  T  SL+  L
Sbjct: 388 ELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVL 447

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
            +  +L         ++S     D   Y  LI+G  KEG   +A  L D M+  G +PD 
Sbjct: 448 CEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDV 507

Query: 688 TTHGLLVG--SSVGEEIDSRRFAF 709
            T+ +L+   S      +++R  F
Sbjct: 508 VTYSVLINGLSKSARTKEAQRLLF 531


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 159/724 (21%), Positives = 279/724 (38%), Gaps = 95/724 (13%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           ++  R  LS   +I VL      S+ +  F W   Q  ++HTA  Y  ++  +    + +
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
             E   Q +  +      E L  LV     +   + A+  L  +    F+ S   +N ++
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 242

Query: 174 GAIVEEKR-------------------GFADFVFVYKEMVKAG----IVPNVDTLNYLLE 210
            A ++  R                   GF    F Y  + K G     +  V+T N++ +
Sbjct: 243 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY-SLCKVGKWREALTLVETENFVPD 301

Query: 211 VLFETNRI---------ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
            +F T  I         E A+D   RM    C PN  T+  ++ G +   ++     +L 
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            M   G       +  ++   C       A +L K M     MP  + Y  LI  +C + 
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421

Query: 322 R------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV--- 372
                  LD A     +M+  G+           R LC  GK++++ + + +  G     
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481

Query: 373 -TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN---EEIRK-- 425
            TS ++ +L   CNA K  LA  + E+M     +AD  ++ I +   C+    E+ RK  
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541

Query: 426 ------------------------------AYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                                         A EL   M+    +P+  TYSA + G CK 
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601

Query: 456 CNYEDALRVFRQVSAQSLVLDS----------------ISYSKLVEGLCQVEKITEAVEV 499
              E A ++F ++     V D                 ++Y  L++G C+  ++ EA ++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              MS  GC  +   ++ LI GLC + K+D+A  +++     G   T  TY+ ++    K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           ++R      VL++ML   CA +V  Y  +I  + +  K  +      +M + G  P+  T
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             +++ G     ++      + ++ S     +   Y +LI+   K G    A  LL+ M 
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841

Query: 680 GKGW 683
              W
Sbjct: 842 QTHW 845



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 249/578 (43%), Gaps = 57/578 (9%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M++  YP+ +    SLV ++      + A ++L  M   G      V+N+++G+I  +K 
Sbjct: 364 MMEGCYPSPK-IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 182 GF-ADFVFV----YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
               D + +    Y EM+ AG+V N   ++     L    + E A    R M  +G  P+
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           + T+  V+  L   S+++ +  +  EM   G+  ++  YT ++   C+   +E+A + F 
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            MR +   P+ +TY  LI+   +  ++  AN++ E M+  G  P    +  ++ G C+ G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRW 416
           + +++                                 I E+M       C S ++P   
Sbjct: 603 QVEKACQ-------------------------------IFERM-------CGSKDVP--- 621

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
             + +   K Y+       +S  P+  TY A + G CK    E+A ++   +S +    +
Sbjct: 622 --DVDMYFKQYD------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            I Y  L++GLC+V K+ EA EV   MS++G   +  +++ LI     +++ D A ++ S
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
               +  +     YT+++ GL K+ +  +   ++  M  +GC  +V  Y  +I       
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           K++ C      M   G+ P+  T   L+        L +  + + ++        ++ Y 
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I G  KE + S    LLD +      P  + + LL+
Sbjct: 854 KVIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLI 889



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 233/511 (45%), Gaps = 26/511 (5%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +   A  V+  M   GF      ++ VL  +    +    F+ +++EM + G+V +V T 
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL-LFEEMKRGGLVADVYTY 521

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +++   +   IE A   F  M + GC PN  T+  +I   +   +V  +  +   M  
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE----------------LT 309
            G    +  Y+ +I   C+  ++E+A ++F+ M     +PD                 +T
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES--VNFLED 367
           Y  L++  C++ R+++A  +L+ M + G  P   V+  ++ GLC+VGK DE+  V     
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701

Query: 368 KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
           + G+  +   +++L++      +  LA  +L KM +   A +   +   I  LC+  +  
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +AY+L+  M      P+  TY+A + G   +   E  L +  ++ ++ +  + ++Y  L+
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +  C+   +  A  +   M +      ++ +  +I G    ++  +++ L        T+
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 879

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL-DVEA-YCILIQSMSEQNKLKDCA 602
              S Y  ++  L+K QR +  L +L ++      L D  + Y  LI+S+   NK++   
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             F+ M K G++P+ ++  SL+ GL   S++
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 133/635 (20%), Positives = 247/635 (38%), Gaps = 109/635 (17%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN---- 216
           G+K +  V+N ++  IV +     D   V +E ++     + +     L VL   +    
Sbjct: 160 GYKHTAPVYNALVDLIVRD-----DDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNG 214

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               AL++  R+      P+  T+  +I+  +   R+D +  I  EM    ++++     
Sbjct: 215 SFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 274

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND-------- 328
           C    LC+  K  EA+ L   +   + +PD + Y +LI+ LCE    ++A D        
Sbjct: 275 CFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT 331

Query: 329 ---------------------------ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
                                      +L  M++ G  P+  +F  +V   C  G    +
Sbjct: 332 SCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391

Query: 362 VNFLED--KCGYVTS--PHNALL------------------------------------- 380
              L+   KCG++     +N L+                                     
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451

Query: 381 ----ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                C C+AGK+  A  ++ +M  +  I D  +++  + +LC   ++  A+ L   M  
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             +V D  TY+  V   CK    E A + F ++       + ++Y+ L+    + +K++ 
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS-------------- 541
           A E+F  M   GC  +  +++ LI G C   +V+KA ++      S              
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631

Query: 542 --GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TY  ++ G  K  R ++   +L  M +EGC  +   Y  LI  + +  KL 
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +       M + G      T  SL+       +  L S  ++K++ +S   +  +Y  +I
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +GL K G T +A  L+ +M  KG  P+  T+  ++
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 11/343 (3%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV T   LL+   +++R+E A      M  +GC PN   ++ +I GL    ++D++  +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G    L  Y+ +I    +  + + A ++   M      P+ + Y E+I+ LC+
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             + D+A  +++ M   G  P    +  ++ G   +GK +  +  LE       +P    
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE--NEEIRKAYELLGRM 433
           +  L++ CC  G   +A  +LE+M   K     +     R + E  N+E  ++  LL  +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEM---KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS--AQSLVLDSISYSKLVEGLCQVE 491
                 P  + Y   +    K    E ALR+  +V+  + +LV  S +Y+ L+E LC   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           K+  A ++F  M+K G      SF  LI GL    K+ +A+ L
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/525 (19%), Positives = 212/525 (40%), Gaps = 71/525 (13%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           AG  E+   + + M+ + +         ++    N  ++  A  +   M  GG    V  
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 169 FNVVL-----GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           + +++       ++E+ R +      + EM + G  PNV T   L+    +  ++  A +
Sbjct: 521 YTIMVDSFCKAGLIEQARKW------FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF----------------DLG 267
            F  M  +GC PN  T+  +I G     +V+ +  I   M                 D  
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
            +  +  Y  ++   C+ +++EEA +L   M      P+++ Y+ LI+ LC+  +LD+A 
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694

Query: 328 DILEDMIVIGL-----------------------------------TPTDDVFVDIVRGL 352
           ++  +M   G                                     P   ++ +++ GL
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754

Query: 353 CEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
           C+VGK DE+   +    E  C      + A+++     GK      +LE+M  + +A + 
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++ + I   C+N  +  A+ LL  M  +      A Y   + G  K   + ++L +  +
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDE 872

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL--SSSSFNILIYGLCVM 525
           +           Y  L++ L + +++  A+ +   ++    +L   SS++N LI  LC+ 
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 932

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
            KV+ A +L S     G      ++  ++ GL +  +  + L++L
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 44/211 (20%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRV 147
           +K  Q    TY  MI   G+ G +E    L + M  K   PN     +      ++H   
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV-----LIDHCCK 826

Query: 148 NGAMRVLVNM-----------NSGGFKLSVDVFNV----VLGAIVE-EKRGFADFVFVYK 191
           NGA+ V  N+           ++ G++  ++ FN      LG + E  +   A F+ VY+
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886

Query: 192 EMV----------------------KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            ++                       A +V    T N L+E L   N++E+A   F  M 
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           KKG  P  ++F  +IKGL  NS++ +++ +L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 206/440 (46%), Gaps = 8/440 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D + ++ +M ++  +P++   + LL  + + N+ E+ +  FR +   G   +  +F  
Sbjct: 60  FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I      +R+  ++S LG+M  LG +  +  +  ++   C  N+  EA+ L   +  L 
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ + Y  +I+ LCE  +++ A D+L+ M  +G+ P    +  ++  L   G +  S 
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             L D      SP     +AL++     G+   AK    +M  R +  +  ++N  I  L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C +  + +A ++L  +V     P+  TY+  + G CK    +D +++   +S   +  D+
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRS 536
            +Y+ L +G CQ  K + A +V   M   G      +FNIL+ GLC   K+ KA +RL  
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           L   S T     TY  I+ GL K  + +D   +   + ++G + DV  Y  ++  +  + 
Sbjct: 420 LQ-KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478

Query: 597 KLKDCALFFNVMVKA-GLVP 615
             ++    +  M K  GL+P
Sbjct: 479 LWREAHELYRKMQKEDGLMP 498



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 181/378 (47%), Gaps = 6/378 (1%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           +  +L+  F    R++ A+  L  M   GF+ S+  F  ++       R F + + +  +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR-FYEAMSLVDQ 174

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           +V  G  PNV   N +++ L E  ++ +ALD  + M K G  P+  T+  +I  L  +  
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              S  IL +M  +GI  ++  ++ +I +  +E +L EA + +  M    + P+ +TY  
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDK 368
           LIN LC +  LD+A  +L  ++  G  P    +  ++ G C+  + D+ +  L     D 
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
               T  +N L +  C AGKF  A+ +L +M    +  D  ++NI +  LC++ +I KA 
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
             L  +  S  V    TY+  + G CK    EDA  +F  ++ + +  D I+Y  ++ GL
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474

Query: 488 CQVEKITEAVEVFCCMSK 505
            +     EA E++  M K
Sbjct: 475 RRKRLWREAHELYRKMQK 492



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 185/439 (42%), Gaps = 30/439 (6%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           + +D++++  +M +      +  ++ ++  + + NK E  I LF+ +  L +  D  ++ 
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+C C   RL  A   L  M+ +G  P+   F  +V G C V +F E+++ ++   G 
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
              P+  +                              +N  I  LCE  ++  A ++L 
Sbjct: 179 GYEPNVVI------------------------------YNTIIDSLCEKGQVNTALDVLK 208

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    + PD  TY++ +        +  + R+   +    +  D I++S L++   +  
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++ EA + +  M +   + +  ++N LI GLC+   +D+A ++ ++  S G      TY 
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K +R  D + +L  M  +G   D   Y  L Q   +  K          MV  
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+ PD  T   LL GL D  ++      +  L     V+    YNI+I GL K      A
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448

Query: 672 SYLLDLMLGKGWVPDATTH 690
            YL   +  KG  PD  T+
Sbjct: 449 WYLFCSLALKGVSPDVITY 467



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 116/269 (43%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L   M  S  +P    +S  ++   KL  YE  + +FR +    +  D  S++ L++
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  +++ A+     M K G   S  +F  L+ G C + +  +A+ L       G   
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               Y  I+  L +  +    L VL  M   G   DV  Y  LI  +         A   
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + M++ G+ PD  T  +L+       QL       N+++  S   +   YN LINGL   
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL  +A  +L++++ KG+ P+A T+  L+
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 35/288 (12%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  S+   I   C    +  A   LG+M+     P   T+ + V G C +  + +A+ + 
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            Q+       + + Y+ +++ LC+  ++  A++V   M K G      ++N LI  L   
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL--- 229

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
                        + SGT   ++                    +L+ M+  G + DV  +
Sbjct: 230 -------------FHSGTWGVSAR-------------------ILSDMMRMGISPDVITF 257

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    ++ +L +    +N M++  + P+  T  SL++GL     L      +N LVS
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                ++  YN LING  K         +L +M   G   D  T+  L
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 208/440 (47%), Gaps = 8/440 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D + ++ +M ++  +P++   + LL  + +  + E+ +  FR +   G   +  +F  
Sbjct: 54  FNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFST 113

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I      SR+  ++S LG+M  LG +  +  +  ++   C  N+++EA+ L   +  L 
Sbjct: 114 LIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLG 173

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ + Y  +I+ LCEN ++D A D+L  M  +G+ P    +  ++  L   GK+  S 
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSA 233

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             L D       P     +A+++     G+   AK   ++M  R +  +  ++N  I  L
Sbjct: 234 RILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGL 293

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C +  + +A ++L  MV     P+  TY+  V G CK    +DA+++   +S   +  D+
Sbjct: 294 CIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDT 353

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRS 536
            +Y+ L +G CQ  +   A +V   M   G      +FN+L+ GLC   K++KA ++L  
Sbjct: 354 FTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLED 413

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           L  S  T     TY  I+ G+ K  + +D   +   + ++G + DV  Y  ++  +  + 
Sbjct: 414 LQKSE-TVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKR 472

Query: 597 KLKDCALFFNVMVK-AGLVP 615
              +    +  M K  GL+P
Sbjct: 473 LWLEAHELYRKMKKDDGLMP 492



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 183/376 (48%), Gaps = 6/376 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  F    R++ A+  L  M   GF+ S+  F  ++       R   + + +  ++V 
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR-IQEAMSLVDQIVG 171

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PNV   N +++ L E  ++++ALD    M K G  P+  T+  +I  L  + +   
Sbjct: 172 LGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGV 231

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           S  IL +M  +GI  ++  ++ +I +  +E +L EA + +  M    + P+ +TY  LIN
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGY 371
            LC +  LD+A  +L  M+  G  P    +  +V G C+  + D+++  L     D    
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
            T  +N L +  C AG+F  A+ +L +M    +  D  ++N+ +  LCE+ +I KA   L
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKL 411

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             +  S  V    TY+  + G CK    EDA  +F  ++ + +  D I+Y+ ++ GL + 
Sbjct: 412 EDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRK 471

Query: 491 EKITEAVEVFCCMSKN 506
               EA E++  M K+
Sbjct: 472 RLWLEAHELYRKMKKD 487



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 30/416 (7%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           ++ ++  + +  K E  I LF+ +  L +  D  ++  LI+C C   RL  A   L  M+
Sbjct: 76  FSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMM 135

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
            +G  P+   F  +V G C V +  E+++ ++   G    P+  +               
Sbjct: 136 KLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVI--------------- 180

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                          +N  I  LCEN ++  A ++L  M    + PD  TY++ +     
Sbjct: 181 ---------------YNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFH 225

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
              +  + R+   +    +  D I++S +++   +  ++ EA + +  M +     +  +
Sbjct: 226 SGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVT 285

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LI GLC+   +D+A ++ +   S G      TY  ++ G  K +R  D + +L  M 
Sbjct: 286 YNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMS 345

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G   D   Y  L Q   +  +          MV  G++PD  T   LL GL +  ++ 
Sbjct: 346 HDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIE 405

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
                +  L     V+    YNI+I G+ K      A YL   +  KG  PD  T+
Sbjct: 406 KALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITY 461



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 118/269 (43%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L   M  S  +P    +S  ++   KL  YE  + +FR +    +  D  S+S L++
Sbjct: 57  ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  +++ A+     M K G   S  +F  L+ G C + ++ +A+ L       G   
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               Y  I+  L + ++    L VL  M   G   DV  Y  LI  +    K    A   
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           + M++ G+ PD  T  +++       QL       ++++  S   +   YN LINGL   
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           GL  +A  +L+ M+ KG+ P+A T+  LV
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLV 325


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 159/724 (21%), Positives = 279/724 (38%), Gaps = 95/724 (13%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           ++  R  LS   +I VL      S+ +  F W   Q  ++HTA  Y  ++  +    + +
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
             E   Q +  +      E L  LV     +   + A+  L  +    F+ S   +N ++
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 242

Query: 174 GAIVEEKR-------------------GFADFVFVYKEMVKAG----IVPNVDTLNYLLE 210
            A ++  R                   GF    F Y  + K G     +  V+T N++ +
Sbjct: 243 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS-LCKVGKWREALTLVETENFVPD 301

Query: 211 VLFETNRI---------ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
            +F T  I         E A+D   RM    C PN  T+  ++ G +   ++     +L 
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            M   G       +  ++   C       A +L K M     MP  + Y  LI  +C + 
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421

Query: 322 R------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV--- 372
                  LD A     +M+  G+           R LC  GK++++ + + +  G     
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481

Query: 373 -TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN---EEIRK-- 425
            TS ++ +L   CNA K  LA  + E+M     +AD  ++ I +   C+    E+ RK  
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541

Query: 426 ------------------------------AYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                                         A EL   M+    +P+  TYSA + G CK 
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601

Query: 456 CNYEDALRVFRQVSAQSLVLDS----------------ISYSKLVEGLCQVEKITEAVEV 499
              E A ++F ++     V D                 ++Y  L++G C+  ++ EA ++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              MS  GC  +   ++ LI GLC + K+D+A  +++     G   T  TY+ ++    K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           ++R      VL++ML   CA +V  Y  +I  + +  K  +      +M + G  P+  T
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             +++ G     ++      + ++ S     +   Y +LI+   K G    A  LL+ M 
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841

Query: 680 GKGW 683
              W
Sbjct: 842 QTHW 845



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 248/578 (42%), Gaps = 57/578 (9%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M++  YP+ +    SLV ++      + A ++L  M   G      V+N+++G+I  +K 
Sbjct: 364 MMEGCYPSPK-IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 182 GF-ADFV----FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
               D +      Y EM+ AG+V N   ++     L    + E A    R M  +G  P+
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           + T+  V+  L   S+++ +  +  EM   G+  ++  YT ++   C+   +E+A + F 
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            MR +   P+ +TY  LI+   +  ++  AN++ E M+  G  P    +  ++ G C+ G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRW 416
           + +++                                 I E+M       C S ++P   
Sbjct: 603 QVEKACQ-------------------------------IFERM-------CGSKDVP--- 621

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
             + +   K Y+       +S  P+  TY A + G CK    E+A ++   +S +    +
Sbjct: 622 --DVDMYFKQYD------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            I Y  L++GLC+V K+ EA EV   MS++G   +  +++ LI     +++ D A ++ S
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
               +  +     YT+++ GL K+ +  +   ++  M  +GC  +V  Y  +I       
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           K++ C      M   G+ P+  T   L+        L +  + + ++        ++ Y 
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I G  KE + S    LLD +      P  + + LL+
Sbjct: 854 KVIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLI 889



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 233/511 (45%), Gaps = 26/511 (5%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +   A  V+  M   GF      ++ VL  +    +    F+ +++EM + G+V +V T 
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL-LFEEMKRGGLVADVYTY 521

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +++   +   IE A   F  M + GC PN  T+  +I   +   +V  +  +   M  
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE----------------LT 309
            G    +  Y+ +I   C+  ++E+A ++F+ M     +PD                 +T
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES--VNFLED 367
           Y  L++  C++ R+++A  +L+ M + G  P   V+  ++ GLC+VGK DE+  V     
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701

Query: 368 KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
           + G+  +   +++L++      +  LA  +L KM +   A +   +   I  LC+  +  
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +AY+L+  M      P+  TY+A + G   +   E  L +  ++ ++ +  + ++Y  L+
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +  C+   +  A  +   M +      ++ +  +I G    ++  +++ L        T+
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 879

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL-DVEA-YCILIQSMSEQNKLKDCA 602
              S Y  ++  L+K QR +  L +L ++      L D  + Y  LI+S+   NK++   
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             F+ M K G++P+ ++  SL+ GL   S++
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 133/635 (20%), Positives = 247/635 (38%), Gaps = 109/635 (17%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN---- 216
           G+K +  V+N ++  IV +     D   V +E ++     + +     L VL   +    
Sbjct: 160 GYKHTAPVYNALVDLIVRD-----DDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNG 214

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               AL++  R+      P+  T+  +I+  +   R+D +  I  EM    ++++     
Sbjct: 215 SFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 274

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND-------- 328
           C    LC+  K  EA+ L   +   + +PD + Y +LI+ LCE    ++A D        
Sbjct: 275 CFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT 331

Query: 329 ---------------------------ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
                                      +L  M++ G  P+  +F  +V   C  G    +
Sbjct: 332 SCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391

Query: 362 VNFLED--KCGYVTS--PHNALL------------------------------------- 380
              L+   KCG++     +N L+                                     
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451

Query: 381 ----ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                C C+AGK+  A  ++ +M  +  I D  +++  + +LC   ++  A+ L   M  
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             +V D  TY+  V   CK    E A + F ++       + ++Y+ L+    + +K++ 
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS-------------- 541
           A E+F  M   GC  +  +++ LI G C   +V+KA ++      S              
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631

Query: 542 --GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TY  ++ G  K  R ++   +L  M +EGC  +   Y  LI  + +  KL 
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +       M + G      T  SL+       +  L S  ++K++ +S   +  +Y  +I
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +GL K G T +A  L+ +M  KG  P+  T+  ++
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 11/343 (3%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV T   LL+   +++R+E A      M  +GC PN   ++ +I GL    ++D++  +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G    L  Y+ +I    +  + + A ++   M      P+ + Y E+I+ LC+
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             + D+A  +++ M   G  P    +  ++ G   +GK +  +  LE       +P    
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE--NEEIRKAYELLGRM 433
           +  L++ CC  G   +A  +LE+M   K     +     R + E  N+E  ++  LL  +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEM---KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS--AQSLVLDSISYSKLVEGLCQVE 491
                 P  + Y   +    K    E ALR+  +V+  + +LV  S +Y+ L+E LC   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           K+  A ++F  M+K G      SF  LI GL    K+ +A+ L
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/525 (19%), Positives = 212/525 (40%), Gaps = 71/525 (13%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           AG  E+   + + M+ + +         ++    N  ++  A  +   M  GG    V  
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 169 FNVVL-----GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           + +++       ++E+ R +      + EM + G  PNV T   L+    +  ++  A +
Sbjct: 521 YTIMVDSFCKAGLIEQARKW------FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF----------------DLG 267
            F  M  +GC PN  T+  +I G     +V+ +  I   M                 D  
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
            +  +  Y  ++   C+ +++EEA +L   M      P+++ Y+ LI+ LC+  +LD+A 
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694

Query: 328 DILEDMIVIGL-----------------------------------TPTDDVFVDIVRGL 352
           ++  +M   G                                     P   ++ +++ GL
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754

Query: 353 CEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
           C+VGK DE+   +    E  C      + A+++     GK      +LE+M  + +A + 
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++ + I   C+N  +  A+ LL  M  +      A Y   + G  K   + ++L +  +
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDE 872

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL--SSSSFNILIYGLCVM 525
           +           Y  L++ L + +++  A+ +   ++    +L   SS++N LI  LC+ 
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 932

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
            KV+ A +L S     G      ++  ++ GL +  +  + L++L
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 38/304 (12%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  +I  L   G ++E + +   M +  +P       SL+  +    R + A +VL  M 
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNR 217
                 +V ++  ++  +   K G  D  +   +M++  G  PNV T   +++      +
Sbjct: 737 ENSCAPNVVIYTEMIDGLC--KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-------------- 263
           IE+ L+   RM  KG  PN  T+ ++I     N  +D + ++L EM              
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854

Query: 264 ----FD------LGIQLE---------LSFYTCIIPMLCRENKLEEAIRLFKMMRALD-- 302
               F+      LG+  E         LS Y  +I  L +  +LE A+RL + +      
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L+    TY  LI  LC   +++ A  +  +M   G+ P    F  +++GL    K  E++
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974

Query: 363 NFLE 366
             L+
Sbjct: 975 LLLD 978



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 44/220 (20%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRV 147
           +K  Q    TY  MI   G+ G +E    L + M  K   PN     +      ++H   
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV-----LIDHCCK 826

Query: 148 NGAMRVLVNM-----------NSGGFKLSVDVFNV----VLGAIVE-EKRGFADFVFVYK 191
           NGA+ V  N+           ++ G++  ++ FN      LG + E  +   A F+ VY+
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886

Query: 192 EMV----------------------KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            ++                       A +V    T N L+E L   N++E+A   F  M 
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           KKG  P  ++F  +IKGL  NS++ +++ +L  +  + IQ
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 172/336 (51%), Gaps = 5/336 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++++M   GI P+V T N L++ L +  +   A   F  M K+G  P+  T+  ++ G  
Sbjct: 99  IFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYA 158

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           +   + +   +L  M   G+QL+   +  +I    ++ K++E + +F  MR   L P+ +
Sbjct: 159 SKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAV 218

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  +I+ LC+  RLDDA    E MI  GLTP   V+  ++  LC   K++++   + + 
Sbjct: 219 NYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI 278

Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                +P+    N +L+  C  G+   +K + + +    +  D  +++  I   C   ++
Sbjct: 279 LDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKM 338

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A +LL  MV   + PD  TYS  + G CK+   EDAL +F+++ +  +  D I+Y+ +
Sbjct: 339 DGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNII 398

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           + GL +  +   A E++  ++++G  L  S++NI++
Sbjct: 399 LHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 192/465 (41%), Gaps = 34/465 (7%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V + N +++ LF+   ++ A   +  M  +   P++ T+  +I  L     +D ++ +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L  M    +      Y  I+   C   + E+AI +F+ M +  + PD +TY  L++ LC+
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
           N +  +A  I + M+  GL P    +  ++ G    G   E               H+ L
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM--------------HDLL 170

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                N  +                 D   +NI I    + E++ +   +  +M    + 
Sbjct: 171 ALMVQNGMQL----------------DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLT 214

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+   Y   + G CKL   +DA+  F Q+  + L  + + Y+ L+  LC  +K  +A E+
Sbjct: 215 PNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEEL 274

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              +   G + +   FN ++  LC   +V ++ +L  L    G +    TY+ ++ G   
Sbjct: 275 IFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCL 334

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             +    + +L  M+  G   D   Y  LI    + N+++D    F  M   G+ PD  T
Sbjct: 335 AGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIIT 394

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              +LHGL    +         ++      L+ S YNI++    K
Sbjct: 395 YNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAK 439



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/436 (22%), Positives = 198/436 (45%), Gaps = 12/436 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFV-YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +N ++  + +E  G  D  ++ Y EM+   + P+  T N ++  L +   ++ A++    
Sbjct: 14  YNTIIDGLFKE--GDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTV 71

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M      PN  T+  ++ G  ++ + + ++ I  +M   GI+ ++  Y  ++  LC+  K
Sbjct: 72  M----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGK 127

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             EA ++F  M    L PD  TY  L++       L + +D+L  M+  G+     VF  
Sbjct: 128 CTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNI 187

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++    +  K DE V           +P    +  +++  C  G+   A    E+M D+ 
Sbjct: 188 LICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKG 247

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  +   +   I  LC  ++  KA EL+  ++   + P+   ++  +   CK     ++ 
Sbjct: 248 LTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESK 307

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++F  +    +  D I+YS L++G C   K+  A+++   M   G    S +++ LI G 
Sbjct: 308 KLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGY 367

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C + +++ A+ L     S+G +    TY  I+ GL + +R      + A++   G  L++
Sbjct: 368 CKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLEL 427

Query: 583 EAYCILIQSMSEQNKL 598
             Y I++   ++ N L
Sbjct: 428 STYNIILMDFAKTNSL 443



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 155/330 (46%), Gaps = 5/330 (1%)

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
           + +C      +N +++     G    A     +M DR+++ D  ++N  I  L + + + 
Sbjct: 4   DGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMD 63

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A E+L  MV+    P+C TY++ + G C     E A+ +FR++ +  +  D ++Y+ L+
Sbjct: 64  RAMEVLTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           + LC+  K TEA ++F  M K G     +++  L++G      + +   L +L   +G  
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ 179

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                +  ++    K ++  ++++V ++M  +G   +   Y  +I  + +  +L D  L 
Sbjct: 180 LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN 239

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  M+  GL P+     SL+H L    +       I +++      +   +N +++ L K
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCK 299

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           EG   ++  L DL+   G  PD  T+  L+
Sbjct: 300 EGRVIESKKLFDLLGHIGVNPDVITYSTLI 329



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/428 (22%), Positives = 189/428 (44%), Gaps = 15/428 (3%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  II  L +E  +++A   +  M    + PD +TY  +I  L +   +D A ++L  M+
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV 73

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
           +    P    +  I+ G C  G+ ++++      C     P    +N+L++  C  GK  
Sbjct: 74  M----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCT 129

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A+ I + M  R +  D  ++   +        + + ++LL  MV + +  D   ++  +
Sbjct: 130 EARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILI 189

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
               K    ++ + VF ++  Q L  ++++Y  +++GLC++ ++ +A+  F  M   G +
Sbjct: 190 CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLT 249

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR---AKDL 566
            +   +  LI+ LC   K +KA  L       G +     +  I+  L K  R   +K L
Sbjct: 250 PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKL 309

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             +L  +   G   DV  Y  LI       K+         MV  GL PD  T  +L++G
Sbjct: 310 FDLLGHI---GVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               +++    +   ++ S+    D   YNI+++GL++   T+ A  L   +   G   +
Sbjct: 367 YCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLE 426

Query: 687 ATTHGLLV 694
            +T+ +++
Sbjct: 427 LSTYNIIL 434



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 123/237 (51%), Gaps = 5/237 (2%)

Query: 135 ISLVFSFVNHYRVNGAM----RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
           I+   + ++ Y   GA+     +L  M   G +L   VFN+++ A  ++++   + V V+
Sbjct: 147 ITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEK-VDEVVLVF 205

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
            +M + G+ PN      +++ L +  R++ A+  F +M  KG  PN   +  +I  L   
Sbjct: 206 SKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTY 265

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            + + +  ++ E+ D GI   + F+  I+  LC+E ++ E+ +LF ++  + + PD +TY
Sbjct: 266 DKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITY 325

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
             LI+  C   ++D A  +L  M+ +GL P    +  ++ G C++ + ++++   ++
Sbjct: 326 STLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKE 382



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 178/397 (44%), Gaps = 13/397 (3%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD ++Y  +I+ L +   +D A     +M+   ++P    +  I+  L +    D ++  
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
           L          +N+++   C++G+   A  I  KM    I  D  ++N  + +LC+N + 
Sbjct: 69  LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLG---KCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            +A ++   MV   + PD  TY   + G   K  L    D L +  Q   Q   LD   +
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ---LDHHVF 185

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+    + EK+ E V VF  M + G + ++ ++  +I GLC + ++D A+        
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 541 SGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
            G +     YT ++  L    K ++A++L+    ++L +G   ++  +  ++ S+ ++ +
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIF---EILDQGINPNIVFFNTILDSLCKEGR 302

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           + +    F+++   G+ PD  T  +L+ G     ++      +  +VS     DS  Y+ 
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           LING  K      A  L   M   G  PD  T+ +++
Sbjct: 363 LINGYCKINRMEDALALFKEMESNGVNPDIITYNIIL 399



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 2/276 (0%)

Query: 77  SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS 136
           + A KIF  + +++  +    TY  ++      G + EM  L   MV+            
Sbjct: 129 TEARKIFDSM-VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNI 187

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ ++    +V+  + V   M   G   +   +  V+  + +  R   D +  +++M+  
Sbjct: 188 LICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGR-LDDAMLNFEQMIDK 246

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ PNV     L+  L   ++ E A +    +  +G  PN   F  ++  L    RV +S
Sbjct: 247 GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIES 306

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +   +  +G+  ++  Y+ +I   C   K++ A++L   M ++ L PD +TY  LIN 
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            C+  R++DA  + ++M   G+ P    +  I+ GL
Sbjct: 367 YCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 240/553 (43%), Gaps = 46/553 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR--------------------- 227
           +Y EM+  G++PNV T N L+    +   +  ALD  R                      
Sbjct: 33  LYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVDIDVDTVTYNTAIWGFCQQG 92

Query: 228 -----------MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD--------LGI 268
                      M KK    +S T  I++KG      V     ++  + D          +
Sbjct: 93  LANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNL 152

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           +  L  YT +I   C+++ L EA+ L++ M +   +PD +TY  +IN LC+   L +A  
Sbjct: 153 EPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKA 212

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CG--YVTSPHNALLECCC 384
           +L +M  +G+ P   V+  +V  L + G   ES  +      CG  +       L++   
Sbjct: 213 LLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLF 272

Query: 385 NAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            AGK   A+ +   +A    I +  ++   I   C+  ++  A  LL  M    VVP+  
Sbjct: 273 KAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVV 332

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TYS+ + G  K    + A+R+ +++  Q+++ ++  Y+ L++G  +  K   AV+++  M
Sbjct: 333 TYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEM 392

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
             NG   +S   +  I  L   RK+++A  L     S G       YT +M G  K  R 
Sbjct: 393 KLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRE 452

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
                +  +M   G   DV AY +LI  +    K  D    ++ + + GL PDR T  ++
Sbjct: 453 SAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTM 511

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           ++      +L       N++   S + +S   NIL+ GL K G T +A  +L+ ML  G 
Sbjct: 512 INAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGI 571

Query: 684 VPDATTHGLLVGS 696
            P+ T H  L+ +
Sbjct: 572 CPNVTIHRALLNA 584



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 256/584 (43%), Gaps = 46/584 (7%)

Query: 163 KLSVDVFNVVLGAIVEE--KRGFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           K+ V+  +VV   +V+   K G A   F+Y+ +M+  G+  ++     L++ LF+  + +
Sbjct: 219 KMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSD 278

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A   F  + K  C PN+ T+  +I G      +D + S+L +M    +   +  Y+ II
Sbjct: 279 EAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSII 338

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
               ++  L+ A+R+ K M   ++MP+   Y  LI+   +  + D A D+  +M + GL 
Sbjct: 339 NGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLE 398

Query: 340 PTD---DVFVDIVR---------GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAG 387
                 D F++ ++         GLC   K+  S   L D+  Y +     L++     G
Sbjct: 399 ENSFIVDAFINNLKRGRKMEEAEGLC---KYMMSKGLLLDRVNYTS-----LMDGFFKTG 450

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWLC-----ENEEIRKAYELLGRMVVSSVVPD 441
           +   A  + EKMA+  I  D  ++N+ I  L      + E +      LG      + PD
Sbjct: 451 RESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIRELG------LAPD 504

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
            ATY+  +   CK    E+A++++ ++   S++ +SI+ + LV GL +  +   A++V  
Sbjct: 505 RATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLN 564

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M   G   + +    L+       + D  +++       G       Y  ++  L  L 
Sbjct: 565 EMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLG 624

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
             K   +VL  M  EG + D   Y  LI    + + ++     +  M+  G+ P   T  
Sbjct: 625 MTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYN 684

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            LL GL     +      ++K+       D+S+YN LI+G  K G   +A      M+ K
Sbjct: 685 LLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTK 744

Query: 682 GWVPDATTHGLLVG--SSVGE---------EIDSRRFAFDSSSF 714
           G VP  +T+ +L+   + VG+         E+  RR   +SS++
Sbjct: 745 GLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTY 788



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 221/513 (43%), Gaps = 20/513 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M K  +VPNV T + ++    +   ++ A+   ++M  +   PN+  +  +I G +  
Sbjct: 320 RDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKA 379

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            + D +V +  EM   G++         I  L R  K+EEA  L K M +  L+ D + Y
Sbjct: 380 GKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNY 439

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD-ESVNFLEDKC 369
             L++   +  R   A  + E M   G+      +  ++ GL  +GK+D ESV     + 
Sbjct: 440 TSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIREL 499

Query: 370 GYVT--SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
           G     + +N ++   C  GK   A  +  +M    +  +  + NI +  L +  E  +A
Sbjct: 500 GLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERA 559

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA-LRVFRQVSAQSLVLDSISYSKLVE 485
            ++L  M++  + P+   + A +L  C  C   D  L++ +++    L  +   Y+ L+ 
Sbjct: 560 IDVLNEMLLWGICPNVTIHRA-LLNACSKCERADTILQMHKRLVGMGLKANREVYNSLIT 618

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            LC +     A  V   M+K G S  + ++N LI+G      ++KA+   +   + G S 
Sbjct: 619 VLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSP 678

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  ++ GL+          +L++M   G   D   Y  LI    +    K+   F+
Sbjct: 679 GIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFY 738

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW-- 663
             MV  GLVP   T   L+   A   ++      +N++       +SS Y+ILI G W  
Sbjct: 739 CEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICG-WCN 797

Query: 664 -----------KEGLTSQASYLLDLMLGKGWVP 685
                      K+   ++A  L   M  KG+VP
Sbjct: 798 LSKQPELDRISKKTYRTEARTLFAEMNEKGFVP 830



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 116/521 (22%), Positives = 232/521 (44%), Gaps = 14/521 (2%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           ++ G ++ + +Y+EM+  G +P+V T + ++  L +   +  A    R M K G  PN  
Sbjct: 168 KQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHV 227

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
            + I++  L       +S     +M   G+  +L   T +I  L +  K +EA  +F  +
Sbjct: 228 VYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTL 287

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
             L+ +P+ +TY  +I+  C+   +D A  +L DM    + P    +  I+ G  + G  
Sbjct: 288 AKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGML 347

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP- 413
           D +V  ++        P    +  L++    AGK   A  +  +M    + + +S+ +  
Sbjct: 348 DVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEE-NSFIVDA 406

Query: 414 -IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  L    ++ +A  L   M+   ++ D   Y++ + G  K      A  +  +++   
Sbjct: 407 FINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETG 466

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           +  D ++Y+ L+ GL ++ K  +A  V+  + + G +   +++N +I   C   K++ AI
Sbjct: 467 IKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAI 525

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           +L +          + T   ++ GL K    +  + VL +ML+ G   +V  +  L+ + 
Sbjct: 526 KLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNAC 585

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRE---TMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           S+  +          +V  GL  +RE   +++++L GL    +  LV   +N +  +   
Sbjct: 586 SKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLV---LNNMTKEGIS 642

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            D+  YN LI+G +K     +A      ML +G  P   T+
Sbjct: 643 ADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTY 683



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 187/431 (43%), Gaps = 34/431 (7%)

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           +EE EGLC+ M+ +     R    SL+  F    R + A  +   M   G K  V  +NV
Sbjct: 417 MEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNV 476

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           ++  ++  + G  D   VY  + + G+ P+  T N ++    +  ++E+A+  +  M   
Sbjct: 477 LINGLL--RLGKYDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGH 534

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
              PNS T  I++ GL      + ++ +L EM   GI   ++ +  ++    +  + +  
Sbjct: 535 SVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTI 594

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           +++ K +  + L  +   Y  LI  LC       A  +L +M   G++            
Sbjct: 595 LQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISAD---------- 644

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSW 410
                                T  +NAL+     +     A     +M +  ++    ++
Sbjct: 645 ---------------------TVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTY 683

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N+ +  L     + KAYE+L +M  S + PD + Y+  + G  K+ N ++A++ + ++  
Sbjct: 684 NLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVT 743

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + LV  + +Y+ L+E   +V K+ +A E+   M       +SS+++ILI G C + K  +
Sbjct: 744 KGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPE 803

Query: 531 AIRLRSLAYSS 541
             R+    Y +
Sbjct: 804 LDRISKKTYRT 814



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 78/416 (18%), Positives = 167/416 (40%), Gaps = 61/416 (14%)

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD--IVRGLCE 354
           M+R   ++P    +  LI        +    D+  +M+  G+ P  +VF    +V   C+
Sbjct: 1   MIRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLP--NVFTHNILVHAWCK 58

Query: 355 VGKFDESVNFLE------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           +G    +++ +       D   Y T+      +   N G  FL+  +      +K    D
Sbjct: 59  MGHLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMV------KKDTFFD 112

Query: 409 SW--NIPIRWLCENEEIRKAYELLGRMV--------VSSVVPDCATYSAFVLGKCKLCNY 458
           S+  NI ++  C    ++    ++  ++         +++ P+  TY+  +   CK    
Sbjct: 113 SFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGL 172

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            +AL ++ ++ +   + D ++YS ++ GLC+   +TEA  +   M K G + +   + IL
Sbjct: 173 SEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAIL 232

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           +  L                + +G+++ +  Y                    +QM+V G 
Sbjct: 233 VDSL----------------FKAGSAWESFIYQ-------------------SQMIVCGV 257

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
           + D+     LI  + +  K  +    F  + K   +P+  T  +++ G      +    S
Sbjct: 258 SFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAES 317

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +  +     V +   Y+ +ING  K+G+   A  ++  ML +  +P+A  +  L+
Sbjct: 318 LLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLI 373


>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
 gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
          Length = 580

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/535 (23%), Positives = 229/535 (42%), Gaps = 37/535 (6%)

Query: 74  NDLSSALKIFKWVSIQKR--FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVR 131
           ND  +AL  ++W   Q R  ++H +  Y +++  L  A  + +++ +   M+ +      
Sbjct: 7   NDPGTALFFYRWAGKQNRSSYKHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEP 66

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
           EA + LV  + N   V+ A  +   +   G +    ++NV+ GA+ + +R F D   + +
Sbjct: 67  EAALDLVVCYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQR-FQDVFRMVE 125

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI--VIKGLIA 249
           +++      +  T + L+ +  +   ++ A+   + M  KG      TFE   +I+GL  
Sbjct: 126 DLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCK 185

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             R+D+++ +   M    +  ++  Y  +I  + +   +E+A ++ K M   D  PD+  
Sbjct: 186 GDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFI 245

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---- 365
           Y  +IN  C+     +A  +L  M   G  P   VF  I+ GLC+  KFDE++  L    
Sbjct: 246 YTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSI 305

Query: 366 ----------------EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM---------- 399
                           E KC      ++ L++C C  GK   A  +LE +          
Sbjct: 306 EAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQL 365

Query: 400 --ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
              D    D   ++I I  LC      + + ++  M    V PD   Y+ F+   C+   
Sbjct: 366 LGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSAR 425

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            +DA R+   +       D ISY+ L+  LC   +  EA  +F  M + G   +  ++  
Sbjct: 426 LDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQ 485

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           LI  LC  +K++ A  L +    S       TY  ++LG  + +  ++   +L Q
Sbjct: 486 LIRALCSTKKLEGARHLFNFMKLSKCVPDMETYKALILGHYQNEGVREARQLLEQ 540



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 113/513 (22%), Positives = 195/513 (38%), Gaps = 75/513 (14%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE------------------------ 271
           +SR +  V++ L A  R+ D  S+LGEM D G  LE                        
Sbjct: 30  DSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALDLVVCYANGAMVDRAQAIF 89

Query: 272 -----------LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
                         Y  I   L +  + ++  R+ + + A +    + T + L+   C+ 
Sbjct: 90  NELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALVRIFCKA 149

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVD--IVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
           L +D A   L+ M   GL      F    ++ GLC+  + DE++   E   G        
Sbjct: 150 LAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIF 209

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADRKIADCDS----WNIPIRWLCENEEIRKAYELL 430
            +N ++EC    G    A+ +L+ M +   +DC      +   I   C+    + A  LL
Sbjct: 210 TYNNMIECISKLGMVEQAEKVLKTMEE---SDCKPDKFIYTRVINGFCKLGNFKNAVVLL 266

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV----------------FRQVSAQSLV 474
           GRM  +   PD   +   + G CK   +++AL V                F+    +   
Sbjct: 267 GRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERKCP 326

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVF-----------CCMSKNGCSLSSSSFNILIYGLC 523
             ++ YS+L++ LC+  K+  A ++              +  +GC      ++I+I  LC
Sbjct: 327 ATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALC 386

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
            M   D+   +       G       YT  +    +  R  D   +L  M+  GC  DV 
Sbjct: 387 AMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVI 446

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           +Y  L+ ++    + ++    F VMV+ G+ P+  T   L+  L    +L       N +
Sbjct: 447 SYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFM 506

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                V D   Y  LI G ++     +A  LL+
Sbjct: 507 KLSKCVPDMETYKALILGHYQNEGVREARQLLE 539



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 177/431 (41%), Gaps = 80/431 (18%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF--NVVLGAIVEEKRGFADFVFVYKEM 193
           +LV  F     V+ A+R L  M+S G ++++  F  N ++  + +  R   D      E+
Sbjct: 141 ALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDR--IDEALRLYEL 198

Query: 194 VKAGIVP-NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           ++   VP ++ T N ++E + +   +E A    + M +  C P+   +  VI G      
Sbjct: 199 MRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGN 258

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY-- 310
             ++V +LG M + G   +   + CII  LC+ +K +EA+ + K+       PDE+TY  
Sbjct: 259 FKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFK 318

Query: 311 --------------EELINCLCENLRLDDANDILEDM----------------------- 333
                           L+ CLC+  +++ A  +LED+                       
Sbjct: 319 LAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMY 378

Query: 334 -IVI----------------------GLTPTDDVFVDIVRGLCEVGKFDESVNFLE---- 366
            IVI                      G+ P   V+   +   C   + D++   LE    
Sbjct: 379 SIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVE 438

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
             C      +N LL   C+AG+   A  + + M +  I  +  ++   IR LC  +++  
Sbjct: 439 AGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEG 498

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  L   M +S  VPD  TY A +LG  +     + +R  RQ+  Q    +S ++S+   
Sbjct: 499 ARHLFNFMKLSKCVPDMETYKALILGHYQ----NEGVREARQLLEQ----ESDAFSRRNP 550

Query: 486 GLCQVEKITEA 496
           G   + ++ EA
Sbjct: 551 GKSLLSELHEA 561



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/319 (21%), Positives = 133/319 (41%), Gaps = 39/319 (12%)

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N+    L + +  +  + ++  ++  +     +T  A V   CK    + A+R  + +S
Sbjct: 104 YNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMS 163

Query: 470 AQSL--VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++ L   + +  Y+ L+EGLC+ ++I EA+ ++  M  N       ++N +I  +  +  
Sbjct: 164 SKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGM 223

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           V++A ++      S        YT+++ G  KL   K+ +V+L +M   G A D   +  
Sbjct: 224 VEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDC 283

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDR------------------------------ 617
           +I  + + +K  +  +   V ++AG  PD                               
Sbjct: 284 IIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTG 343

Query: 618 --ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
             E    LL  L +GS+          L  D    D  MY+I+I+ L   G+T +   ++
Sbjct: 344 KVEAACQLLEDLTNGSR-----ESEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVV 398

Query: 676 DLMLGKGWVPDATTHGLLV 694
             M  +G  PDA  + + +
Sbjct: 399 KAMEERGVKPDAVVYTIFL 417



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 2/199 (1%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+V   + +++ L      +      + M ++G  P++  + I +     ++R+DD+
Sbjct: 370 GCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDA 429

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +L  M + G   ++  Y  ++  LC   + EEA RLF++M    + P+  TY +LI  
Sbjct: 430 CRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRA 489

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT--S 374
           LC   +L+ A  +   M +    P  + +  ++ G  +     E+   LE +    +  +
Sbjct: 490 LCSTKKLEGARHLFNFMKLSKCVPDMETYKALILGHYQNEGVREARQLLEQESDAFSRRN 549

Query: 375 PHNALLECCCNAGKFFLAK 393
           P  +LL     AG F+  K
Sbjct: 550 PGKSLLSELHEAGNFYERK 568



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 11/223 (4%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY-KEMVKAGIVPNVDTL 205
            NG+      +   G K  V ++++V+ A+     G  D  FV  K M + G+ P+    
Sbjct: 356 TNGSRESEQLLGGDGCKPDVVMYSIVIDALC--AMGMTDEGFVVVKAMEERGVKPDAVVY 413

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
              L     + R++ A      M + GC P+  ++  ++  L +  + +++  +   M +
Sbjct: 414 TIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVE 473

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI+  +  YT +I  LC   KLE A  LF  M+    +PD  TY+ LI    +N  + +
Sbjct: 474 TGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCVPDMETYKALILGHYQNEGVRE 533

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           A  +LE           D F     G   + +  E+ NF E K
Sbjct: 534 ARQLLEQ--------ESDAFSRRNPGKSLLSELHEAGNFYERK 568



 Score = 43.5 bits (101), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 62/307 (20%), Positives = 116/307 (37%), Gaps = 51/307 (16%)

Query: 461 ALRVFRQVSAQ---SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           AL  +R    Q   S   DS  Y+++V  L   +++++   V   M   GCSL   +   
Sbjct: 12  ALFFYRWAGKQNRSSYKHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALD 71

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L+        VD+A  + +     G  +    Y  I   L KLQR +D+  ++  ++ + 
Sbjct: 72  LVVCYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKN 131

Query: 578 -------------------------------------CALDVEAYCILIQSMSEQNKLKD 600
                                                 A+    Y  LI+ + + +++ +
Sbjct: 132 FTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDE 191

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG--INKLVSDSEV-LDSSMYNI 657
               + +M    +  D  T  +++  +   S+L +V     + K + +S+   D  +Y  
Sbjct: 192 ALRLYELMRGNNVPADIFTYNNMIECI---SKLGMVEQAEKVLKTMEESDCKPDKFIYTR 248

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG-----SSVGEEIDSRRFAFDSS 712
           +ING  K G    A  LL  M   G+ PDA     ++G     S   E +   + + ++ 
Sbjct: 249 VINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAG 308

Query: 713 SFPDSVS 719
             PD V+
Sbjct: 309 CEPDEVT 315


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 259/586 (44%), Gaps = 52/586 (8%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           +  V+N ++ A + E R   D V  +YK+++ +G  P+V T N LL+ L +  R+E A  
Sbjct: 109 TTPVYNRLILAALRESR--LDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQR 166

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F  M  +    N  +F I+ +G     R  D++ +L  M      + L     ++   C
Sbjct: 167 VFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGM----PSMNLVVCNTVVAGFC 218

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM---IVIGLTP 340
           +E  +EEA RL + MR   L P+ +T+   I+ LC+  R+ DA  I +DM      GL  
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPR 278

Query: 341 TDDVFVDI-VRGLCEVGKFDESVNFLE-DKCGYV---TSPHNALLECCCNAGKFFLAKCI 395
            D V  D+ + G C+ G  DE+   ++  +CG        +N  L      G+   A+ +
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQEL 338

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L +MA   I  +  ++NI +  LC+  +   A  +   +    + PD  TY++ +   C 
Sbjct: 339 LREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCS 398

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             N   A R+  +++ +    +S +Y+ L++ L +  + TEA  +   M++ G SL ++ 
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-----------------------TYT 551
            NI+I GLC   ++D A+ +    +  G+                            TY+
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++  L K  R  +    L +M+V+  + D   Y   I    +  K          M K 
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS----MYNILINGLWKEGL 667
           G  P   T   L+ G  +  +    S  I KL+S+ +    S     YN LI    ++G+
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHK----SEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGM 634

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-EEIDSRRFAFDSS 712
            ++A  LLD ML    VP+ T+  LL+ +     +  S +  FD++
Sbjct: 635 VNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAA 680



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 128/564 (22%), Positives = 242/564 (42%), Gaps = 41/564 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV- 194
           ++V  F     V  A R++  M   G   +V  FN  + A+ +  R   D   ++++M  
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGR-VLDAYRIFQDMQE 270

Query: 195 --KAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
             + G+  P+  T + +L    +   ++ A      M   G      ++   + GL+ N 
Sbjct: 271 DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNG 330

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           RV ++  +L EM   GIQ     Y  I+  LC+E K  +A R+   +R+  + PD +TY 
Sbjct: 331 RVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYT 390

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKC 369
            L++  C    +  AN IL++M   G  P    +  +++ L   G+  E+   LE  ++ 
Sbjct: 391 SLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEK 450

Query: 370 GYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
           GY   T+  N +++  C   +  +A  I++ M                W    EE   A 
Sbjct: 451 GYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGM----------------W----EEGSGAL 490

Query: 428 ELLGRMVVSSV---------VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
             LG   +S V         +PD  TYS  +   CK   +++A +   ++  + +  DS+
Sbjct: 491 GRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSV 550

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            Y   + G C+  K + A++V   M K GC+ S+ ++N+LI G     K ++ ++L S  
Sbjct: 551 IYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEM 610

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
              G S    TY  ++    +       + +L +ML      ++ ++ +LI++  +    
Sbjct: 611 KEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDF 670

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNI 657
               + F+  ++      +E +  L+          + +  I ++  +  V + S  Y  
Sbjct: 671 PSAQMVFDAALRT--CGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQ 728

Query: 658 LINGLWKEGLTSQASYLLDLMLGK 681
           +I+GL + G    A  LL L++ K
Sbjct: 729 IISGLCEVGEVDHAHSLLKLLIAK 752



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 125/541 (23%), Positives = 237/541 (43%), Gaps = 46/541 (8%)

Query: 68  RVLDNTNDLSSALKIFKWVSIQKRFQHTAD-----TYCKMILKLGLAGNVEEMEGLCQNM 122
           RVLD       A +IF+   +Q+ +QH        T+  M+     AG V+E   L   M
Sbjct: 257 RVLD-------AYRIFQ--DMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIM 307

Query: 123 VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
               +    E+    +   V + RV  A  +L  M   G + +   +N+++  + +E + 
Sbjct: 308 RCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKA 367

Query: 183 FADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           F D   V +  +++G++ P+V T   LL        I +A      M +KGC PNS T+ 
Sbjct: 368 F-DARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYN 425

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR-- 299
           ++++ L    R  ++  +L  M + G  L+ +    II  LCR ++L+ A+ +   M   
Sbjct: 426 VLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEE 485

Query: 300 ---------------------ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
                                +   +PD++TY  LI+ LC+  R D+A   L +MIV  +
Sbjct: 486 GSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDI 545

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKC 394
           +P   ++   + G C+ GK   ++  L D     C   T  +N L+       K      
Sbjct: 546 SPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMK 605

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           ++ +M ++ I+ +  ++N  I+  C+   + KA  LL  M+ + +VP+  ++   +   C
Sbjct: 606 LMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYC 665

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K+ ++  A  VF   + ++     + Y  +   L    K  EA  +     +   S+ S 
Sbjct: 666 KITDFPSAQMVF-DAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSF 724

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            +  +I GLC + +VD A  L  L  +    +  + +  ++  L    + +D+ ++ A+M
Sbjct: 725 PYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKM 784

Query: 574 L 574
           +
Sbjct: 785 M 785


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 227/521 (43%), Gaps = 12/521 (2%)

Query: 198 IVPNVDTLNYLLEVLFETNRI--ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           + P++   N +L  L  +     +++LD F  +      PN  TF +++    +   + D
Sbjct: 168 VRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLAD 227

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++S L +M   G+  +   Y  ++   CR+  L EA  L   M+   ++P   TY  L++
Sbjct: 228 ALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVS 287

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVT 373
                  +  A D++E M   G  P    +  +  GLC+ GK DE+    ++  + G V 
Sbjct: 288 AYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIV- 346

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
           SP    +N L++ C    +   A  +LE+M ++ + +   + NI ++ LC   ++ +A  
Sbjct: 347 SPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALG 406

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
            L  M    + PD  TY+  +   CK  N   A  +  ++    L +D+ + + L+  LC
Sbjct: 407 RLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 466

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           + ++  EA E+     + G      S+  ++       K + A+ L         + + S
Sbjct: 467 KEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSIS 526

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  ++ GL  + +  + +  L +++  G   D   Y I+I +  ++  L+    F N M
Sbjct: 527 TYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM 586

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           V+    PD  T  +L++GL    +L          V   + +D   YN LI  L K+   
Sbjct: 587 VENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDV 646

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRF 707
             A      M  +G  PD  T+ +L+   S  G  +++++ 
Sbjct: 647 DTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKM 687



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 238/553 (43%), Gaps = 42/553 (7%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           K   AD +    +M   G+ P+  T N LL        +  A     RM K+G  P   T
Sbjct: 222 KGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRAT 281

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  ++        +  +  ++  M   G + +L  Y  +   LC+  K++EA +L   M 
Sbjct: 282 YNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME 341

Query: 300 ALDLM-PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
            L ++ PD +TY  L++   +  R  DA ++LE+M   G+  +      IV+GLC  G+ 
Sbjct: 342 QLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQL 401

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           +E++  LE       +P    +N L++  C AG    A  ++++M    +  D  + N  
Sbjct: 402 EEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTL 461

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +  LC+ +   +A ELL        VPD  +Y   +    K    E AL ++ ++  + L
Sbjct: 462 LYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKL 521

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
                +Y+ L++GL  + K+TEA++    + + G     +++NI+I+  C    ++KA +
Sbjct: 522 TPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
             +    +       T   +M GL    R +  + +    + +G  +DV  Y  LIQ++ 
Sbjct: 582 FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALC 641

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRET---MLS-------------LLHGLADGSQLH--- 634
           + N +     FF  M   GL PD  T   +LS             +LH L +  +L+   
Sbjct: 642 KDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRF 701

Query: 635 ----------LVSSGINKLV-SDSEVL------DSSMYNILINGLWKEGLTSQASYLLDL 677
                      V +G +  V SD E +      D   YN  I  L   G   +A  +LD 
Sbjct: 702 FYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDE 761

Query: 678 MLGKGWVPDATTH 690
           M+ KG   D +T+
Sbjct: 762 MMQKGMSVDNSTY 774



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 125/538 (23%), Positives = 236/538 (43%), Gaps = 10/538 (1%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G + E   L   M KE     R    +LV ++     +  A  V+  M + GF+  +  +
Sbjct: 258 GMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTY 317

Query: 170 NVVLGAIVEEKRGFADFVFVYK-EMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRR 227
           NV+   + +   G  D  F  K EM + GIV P+V T N L++  F+  R   AL+    
Sbjct: 318 NVLAAGLCQA--GKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEE 375

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KG   +  T  I++KGL    ++++++  L  M + G+  ++  Y  +I   C+   
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           + +A  L   M    L  D  T   L+  LC+  R ++A ++L      G  P +  +  
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495

Query: 348 IVRGLCEVGKFDESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++    +  K + ++      ++ K     S +N L++     GK   A   L ++ +  
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + D  ++NI I   C+  ++ KA++   +MV +S  PD  T +  + G C     E A+
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++F     +   +D I+Y+ L++ LC+   +  A+  F  M   G      ++N+L+  L
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL-AQMLVEGCALD 581
               +  +A ++      SG  Y    Y  I   +  ++  KD  V    + +      D
Sbjct: 676 SEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDD 735

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            E+Y   I+ +    +LK+     + M++ G+  D  T ++L+ GL    +    ++G
Sbjct: 736 QESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQTHAAG 793


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 248/555 (44%), Gaps = 38/555 (6%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+    +  L       +   AL  F++M +    PN  T   ++ GL+   R   S SI
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLV---RYPSSFSI 185

Query: 260 LG--EMFD----LGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEE 312
               E+FD    +G+ L++  +  ++   C E KLE+A+ +  +M+   ++ PD +TY  
Sbjct: 186 ASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNT 245

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---------VN 363
           ++  + +  RL D  D+L DM   GL P    + ++V G C++G   E+          N
Sbjct: 246 ILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
            L D C Y     N L+   CNAG       +++ M   K+  D  ++N  I    E   
Sbjct: 306 ILPDLCTY-----NILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGL 360

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYS 481
             +A +L+ +M    V P+  T++  +   CK    E+  R  ++ V       D ++Y 
Sbjct: 361 SLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYH 420

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L++   +V  ++ A+E+   M + G  +++ + N ++  LC  RKVD+A  L   A+  
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR 480

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G      TY  +++G  + ++ +    +  +M        V  +  LI  +    K +  
Sbjct: 481 GYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELA 540

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ + ++GL+PD  T  S++ G     ++       N+ +  S   D+   NIL+NG
Sbjct: 541 MEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-----------SVGEEIDSRRFAFD 710
           L KEG+T +A    + ++ +  V D  T+  ++ +            +  E++ +R   D
Sbjct: 601 LCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPD 659

Query: 711 SSSFPDSVSDILAEG 725
             ++   ++ ++ +G
Sbjct: 660 RFTYNSIITSLMEDG 674



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/578 (22%), Positives = 253/578 (43%), Gaps = 44/578 (7%)

Query: 128 PNVREALISLVFS-FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF--A 184
           P   +AL  +  S +++  + + A++V   M     K ++   N +L  +V     F  A
Sbjct: 127 PPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIA 186

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIV 243
               V+ +MVK G+  +V T N L+       ++E AL    RM  +    P++ T+  +
Sbjct: 187 SAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTI 246

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           +K +    R+ D   +L +M   G+      Y  ++   C+   L+EA ++ ++M+  ++
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +PD  TY  LIN +C    + +  ++++ M  + L P      D+V              
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQP------DVVT------------- 347

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEE 422
                       +N L++ C   G    AK ++E+M +  +     + NI ++WLC+ E+
Sbjct: 348 ------------YNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEK 395

Query: 423 ----IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
                RK  EL+    +    PD  TY   +    K+ +   AL + R++  + + +++I
Sbjct: 396 REEVTRKVKELVE---MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           + + +++ LC+  K+ EA  +     K G  +   ++  LI G     KV+KA  +    
Sbjct: 453 TLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEM 512

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
                + T +T+  ++ GL    + +  +    ++   G   D   +  +I    ++ ++
Sbjct: 513 KRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRV 572

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           +    F+N  +K    PD  T   LL+GL          +  N L+++ EV D+  YN +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTM 631

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           I+   K+    +A  LL  M  K   PD  T+  ++ S
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITS 669



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 31/375 (8%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIV-EEKRGFADFVFVYKEMVK-AGIVPNVDTLNY 207
           A +++  M + G K +    N+ L  +  EEKR   +     KE+V+  G  P++ T + 
Sbjct: 364 AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKR--EEVTRKVKELVEMHGFSPDIVTYHT 421

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++   +   +  AL+  R M +KG   N+ T   ++  L    +VD++ ++L      G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRG 481

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
             ++   Y  +I    RE K+E+A  ++  M+ + + P   T+  LI  LC + + + A 
Sbjct: 482 YIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM 541

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECC 383
           +  +++   GL P D  F  I+ G C+ G+ +++  F  +   +   P     N LL   
Sbjct: 542 EKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
           C  G    A      +   +  D  ++N  I   C+++++++AY+LL  M    + PD  
Sbjct: 602 CKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRF 661

Query: 444 TYSAFV---LGKCKLCNYEDALRVFR--------------------QVSAQSLVLDSISY 480
           TY++ +   +   KL   ++ L+ F                       S + L  ++I+Y
Sbjct: 662 TYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAY 721

Query: 481 SKLVEGLCQVEKITE 495
           S ++  LC   ++ E
Sbjct: 722 SDVINELCSRGRLKE 736


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 227/512 (44%), Gaps = 20/512 (3%)

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           N  +   P+  E L + V S  N + V+ A+     M       S+  FN +L  +++ K
Sbjct: 22  NRRRSPMPSSAEPLKT-VLSIPNGFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTK 80

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
             +   + +  +M   G+ P++ TL+ L+       ++  A   F ++ K G C      
Sbjct: 81  NHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLC------ 134

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
                    N +V++++     +  LG  L    Y  +I  LC+  +   A+++ + +  
Sbjct: 135 --------LNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEG 186

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             +  + + Y  +I+ LC++  + DA  +  +MIV  + PT   F  ++ G C VGKF +
Sbjct: 187 KLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKD 246

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
           +     +      +P     N L++  C  GK   AK ++  M    +     ++N  + 
Sbjct: 247 AFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMD 306

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C   E+ KA  +L  +    V P+  +Y+  + G CK+   ++AL +F ++  + +  
Sbjct: 307 GYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAP 366

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
             ++Y+ L++GLC+  +I  A E+   M  N       ++N LI   C  + VDKAI L 
Sbjct: 367 HKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALV 426

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TY  ++ GL K  + K+   V   +L++G  ++   Y I+I  + ++
Sbjct: 427 KKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKE 486

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
               +  +  + M   G++PD  T  +++  L
Sbjct: 487 GLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 210/486 (43%), Gaps = 61/486 (12%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCR-ENKLEEAIRLFKMMRALDLMPDELTYE 311
           VD++V     M  +     +  +  I+  L + +N     + L   M +  + PD  T  
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR-GLCEVGKFDESVNFLED--- 367
            LINC C                +  +T    VF  I++ GLC  GK +E++ F +    
Sbjct: 107 ILINCYCH---------------LGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151

Query: 368 ---KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                 +VT  +  L+   C  G+   A  +L ++  + +  +   ++  I  LC+++ +
Sbjct: 152 LGFHLNHVT--YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLV 209

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             AY L   M+V  + P   T+S+ + G C +  ++DA R+F ++  +++  D+ +++ L
Sbjct: 210 TDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNIL 269

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           V+ LC+  KI EA  V   M K G   +  ++N L+ G C++ +V KA  + S+      
Sbjct: 270 VDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRV 329

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE--------- 594
           +  + +Y  ++ G  K++   + L +  +M   G A     Y  LI  + +         
Sbjct: 330 APNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWE 389

Query: 595 -------------------------QNKLKDCALFFNVMVKA-GLVPDRETMLSLLHGLA 628
                                    +N+  D A+     +K  G+ P+  T   L+ GL 
Sbjct: 390 LVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLC 449

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
            G QL         L+     +++  YNI+INGL KEGL  +A  LL  M   G +PDA 
Sbjct: 450 KGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAV 509

Query: 689 THGLLV 694
           T+  ++
Sbjct: 510 TYETII 515



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 6/333 (1%)

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           V +  GL   M+ +R P       SL++ F    +   A R+   M           FN+
Sbjct: 209 VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNI 268

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           ++ A+ +E +   +   V   M+K G+ P V T N L++     N +  A      + + 
Sbjct: 269 LVDALCKEGK-IKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM 327

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
              PNSR++ I+I G      VD+++ +  EM   GI      Y  +I  LC+  ++  A
Sbjct: 328 RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYA 387

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
             L   M    +  D +TY  LI+  C+N  +D A  +++ +   G+ P    +  ++ G
Sbjct: 388 WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDG 447

Query: 352 LCEVGKFDESVNFLEDKC--GYVTSP--HNALLECCCNAGKFFLAKCILEKMADRK-IAD 406
           LC+ G+   + +  +D    GY  +   +N ++   C  G F  A+ +L KM D   I D
Sbjct: 448 LCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPD 507

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
             ++   I+ L   +E  KA +LL  MV+  VV
Sbjct: 508 AVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 210/466 (45%), Gaps = 27/466 (5%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV ++ N+ R              G+KLS      ++ A+++E R  AD  +VYKEM++ 
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRS-ADVEYVYKEMIRR 217

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG---LIANSRV 253
            I PNV T N ++  L +T ++  A D    M   GC PN  ++  +I G   L  N ++
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             + ++L EM +  +   L+ +  +I    +++ L  ++++FK M   D+ P+ ++Y  L
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           IN LC   ++ +A  + + M+  G+ P    +  ++ G C+     E+++      G   
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397

Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
            P    +N L++  C  GK      + E+M    I  D  ++N  I  LC N  I  A +
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L  ++  S  +PD  T+   + G C+      A  + +++S   L    ++Y+ +++G C
Sbjct: 458 LFDQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516

Query: 489 QVEKITEAVEVFCCMSK-NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           +   +  A  +   M K     ++ +S+N+L+ G     K++ A  L +     G     
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
            TY                 +V  +M+ +G   D+E +   + + S
Sbjct: 577 ITYE----------------IVKEEMVDQGFVPDIEGHLFNVSTKS 606



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 191/414 (46%), Gaps = 10/414 (2%)

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
            +R E   + F+R    G   ++ + + ++  L+  +R  D   +  EM    IQ  +  
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFT 225

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE---NLRLDDANDILE 331
           +  +I  LC+  K+ +A  + + M+     P+ ++Y  LI+  C+   N ++  A+ +L+
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
           +M+   ++P    F  ++ G  +      S+   ++       P    +N+L+   CN G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           K   A  + +KM    +  +  ++N  I   C+N+ +++A ++ G +     VP    Y+
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             +   CKL   +D   +  ++  + +V D  +Y+ L+ GLC+   I  A ++F  ++  
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G      +F+IL+ G C   +  KA  L       G      TY  +M G  K    K  
Sbjct: 466 GLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524

Query: 567 LVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             +  QM  E    ++V +Y +L+Q  S++ KL+D  +  N M++ GLVP+R T
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 193/407 (47%), Gaps = 16/407 (3%)

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +I  L EN R  D   + ++MI   + P    F  ++  LC+ GK +++ + +ED   Y 
Sbjct: 195 MIALLKEN-RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 373 TSP----HNALLECCC---NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
            SP    +N L++  C     GK + A  +L++M +  ++ +  ++NI I    +++ + 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            + ++   M+   V P+  +Y++ + G C      +A+ +  ++ +  +  + I+Y+ L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            G C+ + + EA+++F  +   G   ++  +N+LI   C + K+D    L+      G  
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ GL +    +    +  Q+  +G   D+  + IL++    + + +  A+ 
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAML 492

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLW 663
              M K GL P   T   ++ G      L   ++   ++  +  + ++ + YN+L+ G  
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFD 710
           ++G    A+ LL+ ML KG VP+  T+ +     V EE+  + F  D
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEI-----VKEEMVDQGFVPD 594



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 8/274 (2%)

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           D   V++++  + +  +  +++ ++  LC+  K+ +A +V   M   GCS +  S+N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265

Query: 520 YGLCVMR---KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            G C +    K+ KA  +      +  S   +T+  ++ G  K       + V  +ML +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
               +V +Y  LI  +    K+ +     + MV AG+ P+  T  +L++G      L   
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVG 695
                 +     V  + MYN+LI+   K G       L + M  +G VPD  T+  L+ G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445

Query: 696 SSVGEEIDSRRFAFD---SSSFPDSVS-DILAEG 725
                 I++ +  FD   S   PD V+  IL EG
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEG 479


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/577 (23%), Positives = 255/577 (44%), Gaps = 70/577 (12%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFN-VVLG----AIVEEKRGFADFVFVYKEMVKAGIVPN 201
           V+ A  V   M + G + S+  FN ++LG     +V    G          M + GIVPN
Sbjct: 200 VHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGI------MGEFGIVPN 253

Query: 202 VDTLNYLLE--VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           V + N L++   +F  +R   A   F  MH+ GC P   T+ I++  L    R+ ++  +
Sbjct: 254 VCSYNILIKGHCVFGWSR--DAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRL 311

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE-------- 311
             EM  +GIQ     +  +I    +  ++++A   ++ M+A  L+PD  T+         
Sbjct: 312 FDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYK 371

Query: 312 -----------------------ELINC-LCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
                                  +++ C LC + RLDDA ++L   I  G   +   F  
Sbjct: 372 FGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNA 431

Query: 348 IVRGLCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++    + G  +E+       +K G    +S  N L+   CN G+   A+ +LE M  + 
Sbjct: 432 LIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 491

Query: 404 IADCDSWNIPIRWLCENEEIR--------KAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                S+ I     C +   R        K ++ +G++    + PD   +SA++ G C+L
Sbjct: 492 YCLSTSFTI-----CLDASFREGNAVCALKCWDDMGKL---GLQPDFIAFSAYINGLCRL 543

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               +A + F +++A+ +V ++ +Y+ ++  LC+   +TEA+++   M +NG      + 
Sbjct: 544 DYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTS 603

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           NILI GLC   K++    L     S+G +  T TY  I+    + +     +  + +ML 
Sbjct: 604 NILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLA 663

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL-ADGSQLH 634
            GC  D+  Y I + S+   + L       + +V  G  PD  T  +L+ G+ +D     
Sbjct: 664 AGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRA 723

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           ++ +G  +L+  +   ++   N+ ++   K+G   +A
Sbjct: 724 MILTG--RLIKMAFQPNTITLNVFLSHFCKQGFGKRA 758



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/559 (22%), Positives = 231/559 (41%), Gaps = 42/559 (7%)

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           A+ + V   + ++G  P++  L  LL +LF +  + +A + F  M  +G  P+  TF  +
Sbjct: 166 AEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAM 225

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I G      V  +  +LG M + GI   +  Y  +I   C      +A +LF+ M     
Sbjct: 226 ILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGC 285

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P  +TY  L++ LC   R+ +A  + ++M  +G+      F  ++ G  + G+ D++  
Sbjct: 286 EPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACA 345

Query: 364 FLEDKCGYVTSPHNALLE-CCCNAGKFFLAKCIL---EKMADRKIADCDSWNIPIRWLCE 419
              +       P +         A KF  A  ++   +      +A  D  ++ +  LC 
Sbjct: 346 AYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLA--DGMDMLVCRLCW 403

Query: 420 NEEIRKAYELLGRMVVSSVVPDCAT-YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +  +  A+ELL R  +    P   T ++A +    K   +E+A  ++R ++   L   S 
Sbjct: 404 DCRLDDAWELL-RGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSS 462

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS------------------------- 513
           +++ L+ GLC   ++ EA  +   M   G  LS+S                         
Sbjct: 463 TFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCALKCWDDMG 522

Query: 514 ---------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
                    +F+  I GLC +  V++A +  +   + G      TY  I+  L +     
Sbjct: 523 KLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMT 582

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + L +   M   G   D+    ILI  +  + KL+        M   GL PD  T  +++
Sbjct: 583 EALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTII 642

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           +       ++   + +NK+++     D   YNI ++ L    + +QA  +LD ++  G  
Sbjct: 643 NAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCP 702

Query: 685 PDATTHGLLVGSSVGEEID 703
           PD+ T+  L+     + +D
Sbjct: 703 PDSVTYNTLMDGICSDVLD 721



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 4/213 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L  AGN+ E   L QNM +    P++  + I L+       ++     +L++
Sbjct: 567 TYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNI-LIDGLCREGKLEMVDNLLLD 625

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G       +N ++ A    K   +   F+ K M+ AG  P++ T N  +  L   +
Sbjct: 626 MCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNK-MLAAGCEPDIFTYNIWMHSLCSNH 684

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            +  A      +   GC P+S T+  ++ G I +  +D ++ + G +  +  Q       
Sbjct: 685 MLNQAGKVLDELVAMGCPPDSVTYNTLMDG-ICSDVLDRAMILTGRLIKMAFQPNTITLN 743

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             +   C++   + A+   + +R    + D+ T
Sbjct: 744 VFLSHFCKQGFGKRALMWAEKLREDSFVFDDAT 776


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/582 (21%), Positives = 241/582 (41%), Gaps = 42/582 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G ++++ + N +L    E KR       +     + G VP+V + + LL+ L +  +   
Sbjct: 144 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 203

Query: 221 ALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           A D  R M + G  C PN   +  VI G      V+ +  +  EM   GI  +L  Y  +
Sbjct: 204 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 263

Query: 279 IPMLCRENKLE-----------------------------------EAIRLFKMMRALDL 303
           +  LC+   ++                                   EA+R+FK MR   +
Sbjct: 264 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +PD +T   L+  LC+  ++ +A D+ + M + G  P    +  ++ G    G   +  +
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 364 FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
             +   G   +P     N L++   N G    A  I  +M D  +  D  ++   I  LC
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
              ++  A E   +M+   V PD   Y+  + G C   +   A  +  ++    + LD +
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            +S ++  LC++ ++ +A  +F      G    +  +N+L+ G C++ K++KA+R+    
Sbjct: 504 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 563

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S+G       Y  ++ G  K+ R  + L +  +ML  G       Y I+I  + E  + 
Sbjct: 564 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRT 623

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
               + F+ M ++G+  D  T   +L GL              +L + +  ++    N +
Sbjct: 624 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           I+G+++     +A  L   +     VP   T+ +++ + + E
Sbjct: 684 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 224/504 (44%), Gaps = 5/504 (0%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++KEMV+ GI P++ T N ++  L +   ++ A    R+M  K   PN+ T+  +I G  
Sbjct: 244 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 303

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           +  +  ++V +  EM    I  ++   + ++  LC+  K++EA  +F  M      PD  
Sbjct: 304 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 363

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           +Y  ++N       L D  D+ + M+  G+ P    F  +++     G  D+++    + 
Sbjct: 364 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
             +   P    +  ++   C  GK   A     +M D+ +A D  ++N  I+  C +  +
Sbjct: 424 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 483

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA EL+  ++ + +  D   +S+ +   CKL    DA  +F       L  D++ Y+ L
Sbjct: 484 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 543

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G C V K+ +A+ VF  M   G   +   +  L+ G C + ++D+ + L       G 
Sbjct: 544 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGI 603

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             +T  Y+ I+ GL +  R     +   +M   G A+D+  Y I+++ + +     +   
Sbjct: 604 KPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 663

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  +    +  +  T+ +++ G+    ++         +     V     Y+I+I  L 
Sbjct: 664 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 723

Query: 664 KEGLTSQASYLLDLMLGKGWVPDA 687
           KEGL  +A  +   M   G  P++
Sbjct: 724 KEGLVEEAEDMFSSMQNAGCEPNS 747



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/513 (22%), Positives = 227/513 (44%), Gaps = 8/513 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + ++++ G+  N+   N+LLE   E  R + ALD    R  + GC P+  ++ I++K L 
Sbjct: 137 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 196

Query: 249 ANSRVDDSVSILGEMFDLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +   +  +L  M + G      +  Y  +I    +E  + +A  LFK M    + PD
Sbjct: 197 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 256

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC+   +D A   L  M+   + P +  + +++ G    G++ E+V   +
Sbjct: 257 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 316

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +   +   P     + L+   C  GK   A+ + + MA + +  D  S+NI +       
Sbjct: 317 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 376

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    +L   M+   + PD  T++  +         + A+ +F ++    +  D ++Y 
Sbjct: 377 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 436

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +A+E F  M   G +    ++N LI G C    + KA  L S   ++
Sbjct: 437 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 496

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       ++ I+  L KL R  D   +    +  G   D   Y +L+       K++  
Sbjct: 497 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 556

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ MV AG+ P+     +L++G     ++    S   +++       + +Y+I+I+G
Sbjct: 557 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L++ G T  A      M   G   D  T+ +++
Sbjct: 617 LFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 196/435 (45%), Gaps = 10/435 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + +T  I M C  R ++ E A+  F  +    L  + +    L+   CE  R D+A 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           DIL      +G  P    +  +++ LC+ GK  ++ + L    + G V SP    +N ++
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G    A  + ++M  R I  D  ++N  +  LC+   + KA   L +MV   V+
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY+  + G      +++A+RVF+++   S++ D ++ S L+  LC+  KI EA +V
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G +    S+NI++ G      +     L  L    G +    T+  ++     
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                  +++  +M   G   DV  Y  +I ++    K+ D    FN M+  G+ PD+  
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G      L      I++++++   LD   ++ +IN L K G    A  + DL +
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 529

Query: 680 GKGWVPDATTHGLLV 694
             G  PDA  + +L+
Sbjct: 530 NVGLHPDAVVYNMLM 544



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 223/505 (44%), Gaps = 29/505 (5%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+KEM +  I+P+V TL+ L+  L +  +I+ A D F  M  KG  P+  ++ I++ G
Sbjct: 312 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 371

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 + D   +   M   GI  +   +  +I        L++A+ +F  MR   + PD
Sbjct: 372 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 431

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +I  LC   ++DDA +    MI  G+ P    +  +++G C  G   ++   + 
Sbjct: 432 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS 491

Query: 367 DKCGYVTSPH------NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           +        H      ++++   C  G+   A+ I +   +  +  D   +N+ +   C 
Sbjct: 492 EIMN--NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 549

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++ KA  +   MV + + P+   Y   V G CK+   ++ L +FR++  + +   +I 
Sbjct: 550 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 609

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           YS +++GL +  +   A   F  M+++G ++   ++NI++ GL   R  D+AI L     
Sbjct: 610 YSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 669

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           +        T   ++ G+ + +R ++   + A +        V  Y I+I +        
Sbjct: 670 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN-------- 721

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY--NI 657
                   ++K GLV + E M S +          L++  + +L+  +E++ +  Y   I
Sbjct: 722 --------LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773

Query: 658 LINGLWKEGLTSQASYLLDLMLGKG 682
                  E LT  A  L+DL   KG
Sbjct: 774 DERNFSLEHLT--AMLLVDLFSSKG 796



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 134/322 (41%), Gaps = 4/322 (1%)

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRMVVS 436
           L++CC  A +  LA     ++    +  +    N  +   CE +   +A + LL R    
Sbjct: 120 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 179

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS--ISYSKLVEGLCQVEKIT 494
             VPD  +YS  +   C       A  + R ++    V     ++Y+ +++G  +   + 
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A ++F  M + G      ++N +++ LC  R +DKA        +        TY  ++
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G     + K+ + V  +M       DV    +L+ S+ +  K+K+    F+ M   G  
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 359

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  +   +L+G A    L  ++   + ++ D    D   +N+LI      G+  +A  +
Sbjct: 360 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 419

Query: 675 LDLMLGKGWVPDATTHGLLVGS 696
            + M   G  PD  T+  ++ +
Sbjct: 420 FNEMRDHGVKPDVVTYRTVIAA 441



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 46/306 (15%)

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           R A    G  V+S   P   TY+  +    +    E AL  F Q+    L ++ I  + L
Sbjct: 99  RAASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHL 155

Query: 484 VEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +EG C+ ++  EA+++    +   GC     S++IL+  LC   K             SG
Sbjct: 156 LEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-------------SG 202

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG---CALDVEAYCILIQSMSEQNKLK 599
                              +A DLL    +M+ EG   C+ +V AY  +I    ++  + 
Sbjct: 203 -------------------QADDLL----RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                F  MV+ G+ PD  T  S++H L     +    + + ++V+   + ++  YN LI
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSSFPDS 717
            G    G   +A  +   M     +PD  T  +L+GS    G +I   R  FD+ +    
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQ 358

Query: 718 VSDILA 723
             D+ +
Sbjct: 359 NPDVFS 364



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 69/135 (51%), Gaps = 1/135 (0%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G  + +  +N+VL  + +  R F + +F++KE+    +  N+ TLN +++ +F+T 
Sbjct: 633 MTESGIAMDICTYNIVLRGLFK-NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 691

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R+E A D F  + +    P+  T+ I+I  LI    V+++  +   M + G +       
Sbjct: 692 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLN 751

Query: 277 CIIPMLCRENKLEEA 291
            ++  L ++N++  A
Sbjct: 752 HVVRELLKKNEIVRA 766


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 144/607 (23%), Positives = 262/607 (43%), Gaps = 61/607 (10%)

Query: 37  SETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDL----SSALKIFKWVSIQKRF 92
           SET   K +       +++ +  +L+P H+ +++   N L    SS L  F  ++ +  F
Sbjct: 60  SETKHEKGYSEN---PRLKRILPSLTPRHVSKLI-TLNPLCLPPSSLLSFFNHLASRPPF 115

Query: 93  QHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR 152
           +HT  +YC M+  L L   + +   L   +V  +  N    L S +   +         R
Sbjct: 116 RHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMP--------R 167

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF-ADFVFVYKEMVKAGI-VPNVDTLNYLLE 210
              + +S G      VF+ ++ A V+   GF  D V  ++ + K    VP     N L  
Sbjct: 168 HHHHHHSVGL-----VFDALISAYVDS--GFTPDAVQCFRLVTKNKFPVPIRGCENLLRR 220

Query: 211 VL-FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           V+      IE +   +  +   G  P    F +++ G      V ++  +  E+   G++
Sbjct: 221 VVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLR 280

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  +  +I   C+   +EE  RL  +M +  + PD  T+  LIN LC+  RLD+ + +
Sbjct: 281 PTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLL 340

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV-NFLEDKCGYVTSPHNALLECCCNAGK 388
            ++M   GL P    F  ++ G C+ GK D ++ NF                       +
Sbjct: 341 FDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNF-----------------------Q 377

Query: 389 FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             LA+ +          D  ++N  I  LC+  ++++A  L+  M  S + PD  T++  
Sbjct: 378 MMLAQGVR--------PDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G CK  + E AL + R++  + + LD ++++ L+ GLC+  ++ +A  +   M   G 
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                ++ ++I   C    V    +L     S G      TY  +M GL K  + K+  +
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L  ML  G A +   Y IL+   S+     D  +F +   + GLV D  +  +L++  +
Sbjct: 550 LLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNS---EKGLVTDYASYTALVNESS 606

Query: 629 DGSQLHL 635
             S+ HL
Sbjct: 607 KTSKDHL 613



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 7/333 (2%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+   C AG    A+ + +++  R +     S+N  I   C++ ++ + + L G M  
Sbjct: 252 NVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMES 311

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             V PD  T+SA + G CK    ++   +F ++  + LV + ++++ L++G C+  K+  
Sbjct: 312 EGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDL 371

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A++ F  M   G      ++N LI GLC +  + +A RL +   +SG      T+T ++ 
Sbjct: 372 ALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLID 431

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K    +  L +  +M+ EG  LD  A+  LI  +  + ++ D       M+ AG  P
Sbjct: 432 GCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKP 491

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T   ++        + +    + ++ SD  V     YN L+NGL K+G    A  LL
Sbjct: 492 DDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLL 551

Query: 676 DLMLGKGWVPDATTHGLLV------GSSVGEEI 702
           D ML  G  P+  T+ +L+      GSSV  +I
Sbjct: 552 DAMLNVGVAPNDITYNILLDGHSKHGSSVDVDI 584



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 11/297 (3%)

Query: 408 DSWNIPIRWLCEN----------EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           + + +PIR  CEN           EI +++ L   ++ S   P    ++  + G CK  +
Sbjct: 205 NKFPVPIRG-CENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGD 263

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
             +A  VF ++  + L    +S++ L+ G C+   + E   +   M   G      +F+ 
Sbjct: 264 VGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSA 323

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI GLC   ++D+   L       G      T+T ++ G  K  +    L     ML +G
Sbjct: 324 LINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG 383

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              D+  Y  LI  + +   LK+     N M  +GL PD+ T  +L+ G      +    
Sbjct: 384 VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESAL 443

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               ++V +   LD   +  LI+GL +EG    A  +L  ML  G+ PD  T+ +++
Sbjct: 444 EIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVI 500


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 220/489 (44%), Gaps = 21/489 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  +    R+  A+R++ +M       +   +N VL  +   K+ +     + +EM++
Sbjct: 189 ALIDGYCRSGRLADALRLIASMPVAPDTYT---YNTVLKGLCCAKQ-WEQAEELMREMIR 244

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
               PN  T    +    +   ++ A++   +M K GC P+   +  ++ G   + RVD+
Sbjct: 245 NSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDE 304

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L  M     +     Y   +  LC   + EE   L   M   D  P++ T+  LIN
Sbjct: 305 ALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLIN 361

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK-CGYVTS 374
            LC+N  ++ A ++LE M   G  P    +  I+    +  + D+++  L+   C   T 
Sbjct: 362 SLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTI 421

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELL 430
             NA+L+C C A +++ A  ++ KM  +   DC     ++NI I  LC+N +++ A E+ 
Sbjct: 422 SFNAVLKCLCKAKRWYDAVELVAKMLKK---DCRINEMTFNILIDSLCQNGQVKDAIEVF 478

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M     +PD  TYS+ + G  +    E A  +FR +  ++   D  SY+  ++GLC  
Sbjct: 479 ELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMA 535

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +  +A E+   M    C  +  +FNILI  LC    V++AI +       G +    TY
Sbjct: 536 ARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTY 595

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ G  +  R  D L  L+ M    C  D  +Y  +++ +    + KD       M++
Sbjct: 596 NALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLR 652

Query: 611 AGLVPDRET 619
               P+  T
Sbjct: 653 KNCTPNEVT 661



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 218/488 (44%), Gaps = 43/488 (8%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  T+  +I G   + R+ D++ ++  M    +  +   Y  ++  LC   + E+A  L 
Sbjct: 183 NVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCCAKQWEQAEELM 239

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           + M      P+E+T+   I   C+N  LD A ++LE M   G TP   ++  +V G  E 
Sbjct: 240 REMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEH 299

Query: 356 GKFDESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIP 413
           G+ DE++  L    C   T  +NA L+  C AG++     ++ +M  +     D +++  
Sbjct: 300 GRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTL 359

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC+N  +  A E+L +M     +PD  +Y+  +         +DAL++ + +  +  
Sbjct: 360 INSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKP- 418

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D+IS++ +++ LC+ ++  +AVE+   M K  C ++  +FNILI  LC   +V  AI 
Sbjct: 419 --DTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIE 476

Query: 534 LRSL-----------AYSSGTSYTTS---------------------TYTKIMLGLVKLQ 561
           +  L            YSS  +  +                      +Y   + GL    
Sbjct: 477 VFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAA 536

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R  D   ++A M+ E C  +   + ILI S+ ++  +      +  M K G+ PD  T  
Sbjct: 537 RWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYN 596

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           +L++G ++  +L      ++ +  +    D+  YN ++ GL +      A  L+  ML K
Sbjct: 597 ALINGYSEQGRLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKDAEKLVTEMLRK 653

Query: 682 GWVPDATT 689
              P+  T
Sbjct: 654 NCTPNEVT 661



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 123/528 (23%), Positives = 223/528 (42%), Gaps = 23/528 (4%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P V + N L++ L    R+  A      +   G   ++ +   ++ G   +  + D+  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERV 172

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           +      G    +  YT +I   CR  +L +A+RL   M    + PD  TY  ++  LC 
Sbjct: 173 VEAARASGTA-NVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             + + A +++ +MI     P +  F   +R  C+ G  D +V  LE    Y  +P    
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           ++ L+      G+   A  +L  M  R    C  +N  ++ LC      +  EL+  MV 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTMLCRPNTVC--YNAALKGLCIAGRWEEVGELIAEMVR 346

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               P+ AT+S  +   C+    E A+ V  Q+     + D +SY+ ++       +  +
Sbjct: 347 KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADD 406

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+++   M    C   + SFN ++  LC  ++   A+ L +            T+  ++ 
Sbjct: 407 ALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILID 463

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA--LFFNVMVKAGL 613
            L +  + KD + V   M    C  D+  Y  LI   SEQ  L + A  LF ++  +A +
Sbjct: 464 SLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG-LDEMAFDLFRSMPCRADI 522

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
                T    L GL   ++       I  +V++  + +   +NILI+ L ++GL ++A  
Sbjct: 523 FSYNAT----LKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAID 578

Query: 674 LLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFDSSSFPDSVS 719
           + + M   G  PD  T+  L+   S  G   D+ +F       PD++S
Sbjct: 579 VYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTIS 626



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 193/419 (46%), Gaps = 30/419 (7%)

Query: 114 EMEGLCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGG 161
           ++   CQN + +R   + E +             +LV  F  H RV+ A+++L   N+  
Sbjct: 257 QIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLL---NTML 313

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
            + +   +N  L  +    R + +   +  EMV+    PN  T + L+  L +   +E A
Sbjct: 314 CRPNTVCYNAALKGLCIAGR-WEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYA 372

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           ++   +M K G  P+  ++  +I      +R DD++ +L  M     + +   +  ++  
Sbjct: 373 VEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKC 429

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC+  +  +A+ L   M   D   +E+T+  LI+ LC+N ++ DA ++ E M      P 
Sbjct: 430 LCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPD 489

Query: 342 DDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
              +  ++ G  E G  + + + F    C      +NA L+  C A ++  A    E +A
Sbjct: 490 IVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAG---ELIA 546

Query: 401 DRKIADC----DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           D    DC     ++NI I  LC+   + +A ++  +M    + PD  TY+A + G  +  
Sbjct: 547 DMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQG 606

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             +DAL+    +  +    D+ISY+ +++GLC+ E+  +A ++   M +  C+ +  +F
Sbjct: 607 RLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 18/442 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  ++  L  A   E+ E L + M++   +PN      + + +F  +  ++ A+ +L  
Sbjct: 218 TYNTVLKGLCCAKQWEQAEELMREMIRNSCHPN-EVTFATQIRAFCQNGLLDRAVELLEQ 276

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G    V +++ ++    E  R       +   + +    PN    N  L+ L    
Sbjct: 277 MPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR----PNTVCYNAALKGLCIAG 332

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R E   +    M +K C PN  TF  +I  L  N  V+ +V +L +M   G   ++  Y 
Sbjct: 333 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 392

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            II     + + ++A++L K M      PD +++  ++ CLC+  R  DA +++  M+  
Sbjct: 393 TIISCFSDQARADDALKLLKSMLC---KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 449

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
                +  F  ++  LC+ G+  +++   E    Y   P    +++L+      G   +A
Sbjct: 450 DCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA 509

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             +   M  R  AD  S+N  ++ LC       A EL+  MV    +P+  T++  +   
Sbjct: 510 FDLFRSMPCR--ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSL 567

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+      A+ V+ Q+    +  D  +Y+ L+ G  +  ++ +A++    M    C   +
Sbjct: 568 CQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDT 624

Query: 513 SSFNILIYGLCVMRKVDKAIRL 534
            S+N ++ GLC   +   A +L
Sbjct: 625 ISYNSILKGLCRAERWKDAEKL 646



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 4/143 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N  L  +    R + D   +  +MV    +PN  T N L+  L +   +  A+D + +M
Sbjct: 525 YNATLKGLCMAAR-WDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQM 583

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P+  T+  +I G     R+DD++  L  M     + +   Y  I+  LCR  + 
Sbjct: 584 PKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERW 640

Query: 289 EEAIRLFKMMRALDLMPDELTYE 311
           ++A +L   M   +  P+E+T++
Sbjct: 641 KDAEKLVTEMLRKNCTPNEVTFK 663


>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Cucumis sativus]
          Length = 760

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 235/532 (44%), Gaps = 18/532 (3%)

Query: 41  MIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYC 100
           M     TT  +  I+SL      + +  VL        AL  F+WV     FQH  +T+ 
Sbjct: 99  MANREWTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHF 158

Query: 101 KMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSG 160
           K+I  LG A  +     +  +M  +      +  + L+ S+     V  A+++   M   
Sbjct: 159 KIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKEL 218

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G + SV  ++ +   I+   R      + +  M+  GI P   T N +L   F + R+E+
Sbjct: 219 GVERSVKSYDALFKEIMRRGRYMMAKRY-FNAMLNEGIEPIRHTYNVMLWGFFLSLRLET 277

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   +  M  +G  P+  T+  +I G      ++++     EM    I   +  YT +I 
Sbjct: 278 AKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIK 337

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                ++ ++A+RLF+ M+A    P+++TY  L+  LC+  +L +A  IL +M+     P
Sbjct: 338 GYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAP 397

Query: 341 TDD-VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLAKC 394
            D+ +F+ ++   C+ G  D +++ L+     ++ P  A     L+E CC AG +  A  
Sbjct: 398 KDNSIFMRLLSCQCKHGDLDAAMHVLKAMI-RLSIPTEAGHYGILIENCCKAGMYDQAVK 456

Query: 395 ILEKMADRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           +LE + +++I          +  ++N+ I++LC + +  KA +   R ++   + D   +
Sbjct: 457 LLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKA-DTFFRQLLKKGIQDEVAF 515

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  + G  K  N + A  + + +  + +  D+ SY  L++      +  +A      M +
Sbjct: 516 NNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIE 575

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           NG S  S+ F  ++  L    +V  A R+ +     G +       KI+  L
Sbjct: 576 NGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 108/535 (20%), Positives = 226/535 (42%), Gaps = 23/535 (4%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY-LLEVLFETNRIESALDQFR 226
           V+NV+  A   +K   A   F + E  +AG+  +    ++ ++E+L   +++  A     
Sbjct: 124 VYNVLHAA---KKSEHALNFFRWVE--RAGLFQHDRETHFKIIEILGRASKLNHARCILL 178

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M  KG   +   F ++I+       V ++V I  +M +LG++  +  Y  +   + R  
Sbjct: 179 DMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRG 238

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +   A R F  M    + P   TY  ++     +LRL+ A    EDM   G++P    + 
Sbjct: 239 RYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYN 298

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM--A 400
            ++ G C     +E+  F  +  G   +P    +  +++   +  +   A  + E+M  A
Sbjct: 299 TMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAA 358

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP-DCATYSAFVLGKCKLCNYE 459
             K  D  +++  +  LC+ E++ +A ++L  MV     P D + +   +  +CK  + +
Sbjct: 359 GEKPNDI-TYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLD 417

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF--------CCMSKNGCSLS 511
            A+ V + +   S+  ++  Y  L+E  C+     +AV++             ++   + 
Sbjct: 418 AAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEME 477

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           +S++N++I  LC   +  KA          G     + +  ++ G  K         +L 
Sbjct: 478 ASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVA-FNNLIRGHAKEGNPDLAFEMLK 536

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M   G + D E+Y +LI+S   + +  D     + M++ G  PD     S++  L    
Sbjct: 537 IMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADG 596

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           ++   S  +N ++      +  +   ++  L+  G   +A   ++L++     PD
Sbjct: 597 RVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPD 651



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 119/521 (22%), Positives = 218/521 (41%), Gaps = 47/521 (9%)

Query: 231 KGCCPNSRT-----FEIVIKGLIAN----SRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           KG  P  R       E +I  ++AN    +R+ +S+  L   FD         +  +  +
Sbjct: 77  KGRIPRGRPRDPEKLEKIICKMMANREWTTRLQNSIRSLVPQFD---------HNLVYNV 127

Query: 282 LCRENKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           L    K E A+  F+ + RA     D  T+ ++I  L    +L+ A  IL DM   G+  
Sbjct: 128 LHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMPNKGVQW 187

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCIL 396
            +D+FV ++    + G   E+V   +   + G   S   ++AL +     G++ +AK   
Sbjct: 188 DEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYF 247

Query: 397 EKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             M +  I     ++N+ +     +  +  A      M    + PD  TY+  + G C+ 
Sbjct: 248 NAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRF 307

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E+A + F ++  +++    ISY+ +++G   V +  +A+ +F  M   G   +  ++
Sbjct: 308 KMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITY 367

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ-RAKDL---LVVLA 571
           + L+ GLC   K+ +A   R +     T +       I + L+  Q +  DL   + VL 
Sbjct: 368 STLLPGLCDAEKLPEA---RKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLK 424

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL-------- 623
            M+      +   Y ILI++  +             +V+  ++   ++ L +        
Sbjct: 425 AMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLI 484

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  L +  Q     +   +L+    + D   +N LI G  KEG    A  +L +M  +G 
Sbjct: 485 IQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGV 543

Query: 684 VPDATTHGLLVGS--SVGEEIDSRRFAFDS----SSFPDSV 718
             DA ++ LL+ S  S GE  D++  A DS       PDS 
Sbjct: 544 SRDAESYKLLIKSYLSKGEPADAKT-ALDSMIENGHSPDSA 583


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 207/450 (46%), Gaps = 23/450 (5%)

Query: 117 GLCQ---NMVKERYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           G C+   NM+     N   +L  SLV S+ N      A ++L  M + G      V+N+ 
Sbjct: 328 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 387

Query: 173 LGAIV-EEKRGFADFV----FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +G+I  +EK    D +     +Y EM+ A  V N   +      L    + + A    + 
Sbjct: 388 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 447

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KG  P++ T+  VI  L   ++V+ +  +  EM  +G+  ++  YT +I   C+   
Sbjct: 448 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 507

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           +E+A  LF+ MR++   P  +TY  LI+   +  ++  ANDI   M+  G  P D  +  
Sbjct: 508 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 567

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           +V GLC+ G   ++        G   S  +     C    +  LA  ++           
Sbjct: 568 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC--EDRHTLAPNVV----------- 614

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++   +  LC+  ++  A+ELL  M+ S   P+   Y A + G CK    + A  VF Q
Sbjct: 615 -TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 673

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++    +    +Y+ L++ + +  ++  A++V   M K+ C+ +  ++  +I GLC + +
Sbjct: 674 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 733

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +KA++L SL    G S    TYT ++ GL
Sbjct: 734 SEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 149/707 (21%), Positives = 264/707 (37%), Gaps = 92/707 (13%)

Query: 48  TDYEAKIQSL----RHNLSPDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTADTYCKM 102
            D++ K + +    R  L+   ++ VL    D      + F W   Q  + HT   Y  +
Sbjct: 86  ADFDGKAERVLRRCRGFLTDSVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYDAL 145

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
              LG  G   + E L + + +E    +   L  LV         N A+  L  +   G+
Sbjct: 146 ADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGY 205

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPN-------------------- 201
           + S   +N ++  +     G  D  F V KEM ++G   +                    
Sbjct: 206 RPSKVTYNALVQVL--SSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 263

Query: 202 ----------VDTL--NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
                     +DT+   +++  L E +  + A+    RM    C PN  T+  ++ G + 
Sbjct: 264 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 323

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             ++     I+  M   G     S +  ++   C E     A +L   M      P  + 
Sbjct: 324 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 383

Query: 310 YEELINCLCENLR------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           Y   I  +C   +      LD A  I  +M+            +  R LC VGKFD++  
Sbjct: 384 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 443

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
            ++                              E M    + D  +++  I +LC   ++
Sbjct: 444 LIK------------------------------EMMRKGFVPDTSTYSKVITFLCHATKV 473

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA+ L   M +  V PD  TY+  +   CK    E A  +F ++ +       ++Y+ L
Sbjct: 474 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 533

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +    + +++ +A ++F  M   GC  +  ++  L+ GLC    + KA  + +    +  
Sbjct: 534 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSD 593

Query: 544 SYTTS----------------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           S  +                 TY  ++ GL K  +      +L  ML  GC  +   Y  
Sbjct: 594 SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDA 653

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI    +  K+      F  M K G +P   T  SL+  +    +L L    +++++ DS
Sbjct: 654 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 713

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   Y  +I+GL + G + +A  LL LM  KG  P+  T+  L+
Sbjct: 714 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 760



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 134/583 (22%), Positives = 232/583 (39%), Gaps = 46/583 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF L+  V   VLGA+ +     A F F++ E  + G        + L + L    R   
Sbjct: 101 GF-LTDSVVVAVLGAVRDAPELCARF-FLWAER-QVGYSHTGACYDALADALGFDGRARD 157

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A    R + ++      R   ++++        ++++  LG + D G +     Y  ++ 
Sbjct: 158 AERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQ 217

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           +L    +++   R+ K M       D  T     + LC+  R  DA D++E         
Sbjct: 218 VLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE--------- 268

Query: 341 TDDVFVD------IVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFF 390
            +D  +D      ++ GL E   FDE+++FL     + C      +  LL       +  
Sbjct: 269 REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLG 328

Query: 391 LAKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
             K I+  M         S +N  +   C  ++   AY+LL RM      P    Y+ F+
Sbjct: 329 WCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 388

Query: 450 ---LGKCKLCN---YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
               G+ KL +    + A +++ ++ A + VL+ ++ +     LC V K  +A ++   M
Sbjct: 389 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 448

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G    +S+++ +I  LC   KV+KA  L       G +    TYT ++    K    
Sbjct: 449 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 508

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           +    +  +M   GC+  V  Y  LI +  +  ++      F+ MV AG  P+  T  +L
Sbjct: 509 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 568

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSM----------------YNILINGLWKEGL 667
           + GL     +        KL+  S+  DS                  Y  L++GL K   
Sbjct: 569 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 628

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
              A  LLD ML  G  P+   +  L+ G     +IDS +  F
Sbjct: 629 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/504 (23%), Positives = 224/504 (44%), Gaps = 5/504 (0%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++KEMV+ GI P++ T N ++  L +   ++ A    R+M  K   PN+ T+  +I G  
Sbjct: 241 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 300

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           +  +  ++V +  EM    I  ++   + ++  LC+  K++EA  +F  M      PD  
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           +Y  ++N       L D  D+ + M+  G+ P    F  +++     G  D+++    + 
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
             +   P    +  ++   C  GK   A     +M D+ +A D  ++N  I+  C +  +
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA EL+  ++ + +  D   +S+ +   CKL    DA  +F       L  D++ YS L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 540

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G C V K+ +A+ VF  M   G   +   +  L+ G C + ++D+ + L       G 
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             +T  Y+ I+ GL +  R     V   +M   G A+D+  Y I+++ + +     +   
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 660

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  +    +  +  T+ +++ G+    ++         +     V     Y+I+I  L 
Sbjct: 661 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 720

Query: 664 KEGLTSQASYLLDLMLGKGWVPDA 687
           KEGL  +A  +   M   G  P++
Sbjct: 721 KEGLVEEAEDMFSSMQNAGCEPNS 744



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/513 (22%), Positives = 227/513 (44%), Gaps = 8/513 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + ++++ G+  N+   N+LLE   E  R + ALD    R  + GC P+  ++ I++K L 
Sbjct: 134 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193

Query: 249 ANSRVDDSVSILGEMFDLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +   +  +L  M + G      +  Y  +I    +E  + +A  LFK M    + PD
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC+   +D A   L  M+   + P +  + +++ G    G++ E+V   +
Sbjct: 254 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +   +   P     + L+   C  GK   A+ + + MA + +  D  S+NI +       
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    +L   M+   + PD  T++  +         + A+ +F ++    +  D ++Y 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +A+E F  M   G +    ++N LI G C    + KA  L S   ++
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       ++ I+  L KL R  D   +    +  G   D   Y +L+       K++  
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 553

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ MV AG+ P+     +L++G     ++    S   +++       + +Y+I+I+G
Sbjct: 554 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 613

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L++ G T  A      M   G   D  T+ +++
Sbjct: 614 LFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 123/582 (21%), Positives = 241/582 (41%), Gaps = 42/582 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G ++++ + N +L    E KR       +     + G VP+V + + LL+ L +  +   
Sbjct: 141 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 221 ALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           A D  R M + G  C PN   +  VI G      V+ +  +  EM   GI  +L  Y  +
Sbjct: 201 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 260

Query: 279 IPMLCRENKLE-----------------------------------EAIRLFKMMRALDL 303
           +  LC+   ++                                   EA+R+FK MR   +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +PD +T   L+  LC+  ++ +A D+ + M + G  P    +  ++ G    G   +  +
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 364 FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
             +   G   +P     N L++   N G    A  I  +M D  +  D  ++   I  LC
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
              ++  A E   +M+   V PD   Y+  + G C   +   A  +  ++    + LD +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            +S ++  LC++ ++ +A  +F      G    +  +++L+ G C++ K++KA+R+    
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 560

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S+G       Y  ++ G  K+ R  + L +  +ML  G       Y I+I  + +  + 
Sbjct: 561 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 620

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
               + F+ M ++G+  D  T   +L GL              +L + +  ++    N +
Sbjct: 621 VPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           I+G+++     +A  L   +     VP   T+ +++ + + E
Sbjct: 681 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 722



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 196/435 (45%), Gaps = 10/435 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + +T  I M C  R ++ E A+  F  +    L  + +    L+   CE  R D+A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           DIL      +G  P    +  +++ LC+ GK  ++ + L    + G V SP    +N ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G    A  + ++M  R I  D  ++N  +  LC+   + KA   L +MV   V+
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY+  + G      +++A+RVF+++   S++ D ++ S L+  LC+  KI EA +V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G +    S+NI++ G      +     L  L    G +    T+  ++     
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                  +++  +M   G   DV  Y  +I ++    K+ D    FN M+  G+ PD+  
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G      L      I++++++   LD   ++ +IN L K G    A  + DL +
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 680 GKGWVPDATTHGLLV 694
             G  PDA  + +L+
Sbjct: 527 NVGLHPDAVVYSMLM 541



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 201/439 (45%), Gaps = 13/439 (2%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+KEM +  I+P+V TL+ L+  L +  +I+ A D F  M  KG  P+  ++ I++ G
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 + D   +   M   GI  +   +  +I        L++A+ +F  MR   + PD
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +I  LC   ++DDA +    MI  G+ P    +  +++G C  G   ++   + 
Sbjct: 429 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS 488

Query: 367 DKCG--------YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           +           + +S  N L    C  G+   A+ I +   +  +  D   +++ +   
Sbjct: 489 EIMNNGMHLDIVFFSSIINNL----CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 544

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C   ++ KA  +   MV + + P+   Y   V G CK+   ++ L +FR++  + +   +
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 604

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           I YS +++GL Q  +   A   F  M+++G ++   ++NI++ GL   R  D+AI L   
Sbjct: 605 ILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 664

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             +        T   ++ G+ + +R ++   + A +        V  Y I+I ++ ++  
Sbjct: 665 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 724

Query: 598 LKDCALFFNVMVKAGLVPD 616
           +++    F+ M  AG  P+
Sbjct: 725 VEEAEDMFSSMQNAGCEPN 743



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 94/192 (48%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V+  MV AGI PNV     L+    +  RI+  L  FR M ++G  P++  + I+I GL 
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R   +     EM + GI +++  Y  ++  L +    +EAI LFK +RA+++  + +
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           T   +I+ + +  R+++A D+   +    L P+   +  ++  L + G  +E+ +     
Sbjct: 676 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 735

Query: 369 CGYVTSPHNALL 380
                 P++ LL
Sbjct: 736 QNAGCEPNSRLL 747



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 134/322 (41%), Gaps = 4/322 (1%)

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRMVVS 436
           L++CC  A +  LA     ++    +  +    N  +   CE +   +A + LL R    
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 176

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS--ISYSKLVEGLCQVEKIT 494
             VPD  +YS  +   C       A  + R ++    V     ++Y+ +++G  +   + 
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A ++F  M + G      ++N +++ LC  R +DKA        +        TY  ++
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G     + K+ + V  +M       DV    +L+ S+ +  K+K+    F+ M   G  
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  +   +L+G A    L  ++   + ++ D    D   +N+LI      G+  +A  +
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 416

Query: 675 LDLMLGKGWVPDATTHGLLVGS 696
            + M   G  PD  T+  ++ +
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAA 438



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 46/306 (15%)

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           R A    G  V+S   P   TY+  +    +    E AL  F Q+    L ++ I  + L
Sbjct: 96  RAASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHL 152

Query: 484 VEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +EG C+ ++  EA+++    +   GC     S++IL+  LC   K             SG
Sbjct: 153 LEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-------------SG 199

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG---CALDVEAYCILIQSMSEQNKLK 599
                              +A DLL    +M+ EG   C+ +V AY  +I    ++  + 
Sbjct: 200 -------------------QADDLL----RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                F  MV+ G+ PD  T  S++H L     +    + + ++V+   + ++  YN LI
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSSFPDS 717
            G    G   +A  +   M     +PD  T  +L+GS    G +I   R  FD+ +    
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQ 355

Query: 718 VSDILA 723
             D+ +
Sbjct: 356 NPDVFS 361



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 4/217 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           +  AL++F  + +    +     YC ++      G ++E   L + M+ +R       L 
Sbjct: 550 MEKALRVFDAM-VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML-QRGIKPSTILY 607

Query: 136 SLVF-SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
           S++        R   A      M   G  + +  +N+VL  + +  R F + +F++KE+ 
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFK-NRCFDEAIFLFKELR 666

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
              +  N+ TLN +++ +F+T R+E A D F  + +    P+  T+ I+I  LI    V+
Sbjct: 667 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVE 726

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           ++  +   M + G +        ++  L ++N++  A
Sbjct: 727 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763


>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
 gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
          Length = 760

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 143/652 (21%), Positives = 288/652 (44%), Gaps = 26/652 (3%)

Query: 49  DYEAKIQSLRHNLSP--DH--LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMIL 104
           D+  ++Q+    L P  DH  +  VL        AL+ F+WV      QH  +T+ K+I 
Sbjct: 97  DWTTRLQNSIRALVPEFDHSLVYNVLHGARKPDHALQFFRWVERAGLIQHDRETHMKIIQ 156

Query: 105 KLGLAGNVEEMEGLC-QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
            LG    +     +  ++M K+ +    +  + L+ S+     V  ++++   M   G +
Sbjct: 157 ILGRYSMLNHARCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVE 216

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            SV  +N +   IV + R      F + +M+  GI P   T N L+   F + R+ +A+ 
Sbjct: 217 RSVKSYNALFKVIVRKGRYMMAKRF-FNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVR 275

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            +  M  +G  P+  T+  +I G   + R++++  +  EM    I   +  YT +I    
Sbjct: 276 FYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYF 335

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
             +++ + +RL + M+++ + P+ +TY  L+  LC+  ++ +A DIL++M+   + P D+
Sbjct: 336 AVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDN 395

Query: 344 -VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLAKCILE 397
            +F+ ++   C+ G    +V+ L D    ++ P  A     L+E  C A ++  A   ++
Sbjct: 396 SIFLKLLNSQCKAGDLKAAVDVL-DGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVD 454

Query: 398 KMADRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           K+ +  I          +  ++N  I++LC + +  KA E+L R ++   V D   ++  
Sbjct: 455 KLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKA-EILFRQLLKKGVEDPLAFNNL 513

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  K    + A  + + +  + +  D+ +Y  L+E   +  +  +A      M ++G 
Sbjct: 514 ICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGH 573

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
              SS F  ++  L    +V  A R+       G         KI+  L+     ++ L 
Sbjct: 574 LPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEALG 633

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            +  ++   C ++ ++   L+  +SE+ K        +  ++     D ++   +L  L 
Sbjct: 634 RIDLLMSSQCNVNFDS---LLSILSEKGKTIAALKLLDFGLQRDCDIDFKSYDKVLDALL 690

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
              +     S + K++    V     Y  LI  L +EG T QA  L  ++ G
Sbjct: 691 AAGKTLNAYSILCKIMEKGGVTSWRSYEDLIKSLNQEGNTKQADILSRMIKG 742


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 158/724 (21%), Positives = 279/724 (38%), Gaps = 95/724 (13%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           ++  R  LS   +I VL      S+ +  F W   Q  ++HTA  Y  ++  +    + +
Sbjct: 82  LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 141

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
             E   Q +  +      + L  LV     +   + A+  L  +    F+ S   +N ++
Sbjct: 142 VPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 201

Query: 174 GAIVEEKR-------------------GFADFVFVYKEMVKAG----IVPNVDTLNYLLE 210
            A ++  R                   GF    F Y  + K G     +  V+T N++ +
Sbjct: 202 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS-LCKVGKWREALTLVETENFVPD 260

Query: 211 VLFETNRI---------ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
            +F T  I         E A+D   RM    C PN  T+  ++ G +   ++     +L 
Sbjct: 261 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 320

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            M   G       +  ++   C       A +L K M     MP  + Y  LI  +C + 
Sbjct: 321 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 380

Query: 322 R------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV--- 372
                  LD A     +M+  G+           R LC  GK++++ + + +  G     
Sbjct: 381 DSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 440

Query: 373 -TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN---EEIRK-- 425
            TS ++ +L   CNA K  LA  + E+M     +AD  ++ I +   C+    E+ RK  
Sbjct: 441 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 500

Query: 426 ------------------------------AYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                                         A EL   M+    +P+  TYSA + G CK 
Sbjct: 501 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 560

Query: 456 CNYEDALRVFRQVSAQSLVLDS----------------ISYSKLVEGLCQVEKITEAVEV 499
              E A ++F ++     V D                 ++Y  L++G C+  ++ EA ++
Sbjct: 561 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 620

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              MS  GC  +   ++ LI GLC + K+D+A  +++     G   T  TY+ ++    K
Sbjct: 621 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 680

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           ++R      VL++ML   CA +V  Y  +I  + +  K  +      +M + G  P+  T
Sbjct: 681 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 740

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
             +++ G     ++      + ++ S     +   Y +LI+   K G    A  LL+ M 
Sbjct: 741 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 800

Query: 680 GKGW 683
              W
Sbjct: 801 QTHW 804



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/579 (22%), Positives = 249/579 (43%), Gaps = 59/579 (10%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M++  YP+ +    SLV ++      + A ++L  M   G      V+N+++G+I  +K 
Sbjct: 323 MMEGCYPSPK-IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 381

Query: 182 GFADFVFV------YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
              +F  +      Y EM+ AG+V N   ++     L    + E A    R M  +G  P
Sbjct: 382 SL-NFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 440

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           ++ T+  V+  L   S+++ +  +  EM   G+  ++  YT ++   C+   +E+A + F
Sbjct: 441 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 500

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             MR +   P+ +TY  LI+   +  ++  AN++ E M+  G  P    +  ++ G C+ 
Sbjct: 501 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 560

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
           G+ +++                                 I E+M       C S ++P  
Sbjct: 561 GQVEKACQ-------------------------------IFERM-------CGSKDVP-- 580

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
              + +   K Y+       +S  P+  TY A + G CK    E+A ++   +S +    
Sbjct: 581 ---DVDMYFKQYD------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 631

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           + I Y  L++GLC+V K+ EA EV   MS++G   +  +++ LI     +++ D A ++ 
Sbjct: 632 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 691

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
           S    +  +     YT+++ GL K+ +  +   ++  M  +GC  +V  Y  +I      
Sbjct: 692 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 751

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            K++ C      M   G+ P+  T   L+        L +  + + ++        ++ Y
Sbjct: 752 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 811

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +I G  KE + S    LLD +      P  + + LL+
Sbjct: 812 RKVIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLI 848



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 233/511 (45%), Gaps = 26/511 (5%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +   A  V+  M   GF      ++ VL  +    +    F+ +++EM + G+V +V T 
Sbjct: 422 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL-LFEEMKRGGLVADVYTY 480

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +++   +   IE A   F  M + GC PN  T+  +I   +   +V  +  +   M  
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 540

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE----------------LT 309
            G    +  Y+ +I   C+  ++E+A ++F+ M     +PD                 +T
Sbjct: 541 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 600

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES--VNFLED 367
           Y  L++  C++ R+++A  +L+ M + G  P   V+  ++ GLC+VGK DE+  V     
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 660

Query: 368 KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
           + G+  +   +++L++      +  LA  +L KM +   A +   +   I  LC+  +  
Sbjct: 661 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 720

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +AY+L+  M      P+  TY+A + G   +   E  L +  ++ ++ +  + ++Y  L+
Sbjct: 721 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 780

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +  C+   +  A  +   M +      ++ +  +I G    ++  +++ L        T+
Sbjct: 781 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 838

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL-DVEA-YCILIQSMSEQNKLKDCA 602
              S Y  ++  L+K QR +  L +L ++      L D  + Y  LI+S+   NK++   
Sbjct: 839 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 898

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
             F+ M K G++P+ ++  SL+ GL   S++
Sbjct: 899 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 929



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 133/635 (20%), Positives = 247/635 (38%), Gaps = 109/635 (17%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN---- 216
           G+K +  V+N ++  IV +     D   V +E ++     + +     L VL   +    
Sbjct: 119 GYKHTAPVYNALVDLIVRD-----DDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNG 173

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               AL++  R+      P+  T+  +I+  +   R+D +  I  EM    ++++     
Sbjct: 174 SFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 233

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND-------- 328
           C    LC+  K  EA+ L   +   + +PD + Y +LI+ LCE    ++A D        
Sbjct: 234 CFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT 290

Query: 329 ---------------------------ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
                                      +L  M++ G  P+  +F  +V   C  G    +
Sbjct: 291 SCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 350

Query: 362 VNFLED--KCGYVTS--PHNALL------------------------------------- 380
              L+   KCG++     +N L+                                     
Sbjct: 351 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINV 410

Query: 381 ----ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                C C+AGK+  A  ++ +M  +  I D  +++  + +LC   ++  A+ L   M  
Sbjct: 411 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 470

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             +V D  TY+  V   CK    E A + F ++       + ++Y+ L+    + +K++ 
Sbjct: 471 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 530

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS-------------- 541
           A E+F  M   GC  +  +++ LI G C   +V+KA ++      S              
Sbjct: 531 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 590

Query: 542 --GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TY  ++ G  K  R ++   +L  M +EGC  +   Y  LI  + +  KL 
Sbjct: 591 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 650

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +       M + G      T  SL+       +  L S  ++K++ +S   +  +Y  +I
Sbjct: 651 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 710

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +GL K G T +A  L+ +M  KG  P+  T+  ++
Sbjct: 711 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 11/343 (3%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV T   LL+   +++R+E A      M  +GC PN   ++ +I GL    ++D++  +
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G    L  Y+ +I    +  + + A ++   M      P+ + Y E+I+ LC+
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             + D+A  +++ M   G  P    +  ++ G   +GK +  +  LE       +P    
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE--NEEIRKAYELLGRM 433
           +  L++ CC  G   +A  +LE+M   K     +     R + E  N+E  ++  LL  +
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEM---KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 832

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS--AQSLVLDSISYSKLVEGLCQVE 491
                 P  + Y   +    K    E ALR+  +V+  + +LV  S +Y+ L+E LC   
Sbjct: 833 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 892

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           K+  A ++F  M+K G      SF  LI GL    K+ +A+ L
Sbjct: 893 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 935



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 107/527 (20%), Positives = 218/527 (41%), Gaps = 75/527 (14%)

Query: 109 AGNVEEMEGLCQNMVKERY-PNVREALISLVFSFV-NHYRVNGAMRVLVNMNSGGFKLSV 166
           AG  E+   + + M+ + + P+   +  S V +++ N  ++  A  +   M  GG    V
Sbjct: 420 AGKYEKAFSVIREMIGQGFIPDT--STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 477

Query: 167 DVFNVVL-----GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
             + +++       ++E+ R +      + EM + G  PNV T   L+    +  ++  A
Sbjct: 478 YTYTIMVDSFCKAGLIEQARKW------FNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 531

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF----------------D 265
            + F  M  +GC PN  T+  +I G     +V+ +  I   M                 D
Sbjct: 532 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 591

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
              +  +  Y  ++   C+ +++EEA +L   M      P+++ Y+ LI+ LC+  +LD+
Sbjct: 592 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 651

Query: 326 ANDILEDMIVIGL-----------------------------------TPTDDVFVDIVR 350
           A ++  +M   G                                     P   ++ +++ 
Sbjct: 652 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 711

Query: 351 GLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA- 405
           GLC+VGK DE+   +    E  C      + A+++     GK      +LE+M  + +A 
Sbjct: 712 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 771

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           +  ++ + I   C+N  +  A+ LL  M  +      A Y   + G  K   + ++L + 
Sbjct: 772 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLL 829

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL--SSSSFNILIYGLC 523
            ++           Y  L++ L + +++  A+ +   ++    +L   SS++N LI  LC
Sbjct: 830 DEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLC 889

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  KV+ A +L S     G      ++  ++ GL +  +  + L++L
Sbjct: 890 LANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 44/211 (20%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRV 147
           +K  Q    TY  MI   G+ G +E    L + M  K   PN     +      ++H   
Sbjct: 731 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV-----LIDHCCK 785

Query: 148 NGAMRVLVNM-----------NSGGFKLSVDVFNV----VLGAIVE-EKRGFADFVFVYK 191
           NGA+ V  N+           ++ G++  ++ FN      LG + E  +   A F+ VY+
Sbjct: 786 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 845

Query: 192 EMV----------------------KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            ++                       A +V    T N L+E L   N++E+A   F  M 
Sbjct: 846 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 905

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           KKG  P  ++F  +IKGL  NS++ +++ +L
Sbjct: 906 KKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936


>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37230-like [Cucumis sativus]
          Length = 760

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 235/532 (44%), Gaps = 18/532 (3%)

Query: 41  MIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYC 100
           M     TT  +  I+SL      + +  VL        AL  F+WV     FQH  +T+ 
Sbjct: 99  MANREWTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHF 158

Query: 101 KMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSG 160
           K+I  LG A  +     +  +M  +      +  + L+ S+     V  A+++   M   
Sbjct: 159 KIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKEL 218

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G + SV  ++ +   I+   R      + +  M+  GI P   T N +L   F + R+E+
Sbjct: 219 GVERSVKSYDALFKEIMRRGRYMMAKRY-FNAMLNEGIEPIRHTYNVMLWGFFLSLRLET 277

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A   +  M  +G  P+  T+  +I G      ++++     EM    I   +  YT +I 
Sbjct: 278 AKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIK 337

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                ++ ++A+RLF+ M+A    P+++TY  L+  LC+  +L +A  IL +M+     P
Sbjct: 338 GYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAP 397

Query: 341 TDD-VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLAKC 394
            D+ +F+ ++   C+ G  D +++ L+     ++ P  A     L+E CC AG +  A  
Sbjct: 398 KDNSIFMRLLSCQCKHGDLDAAMHVLKAMI-RLSIPTEAGHYGILIENCCKAGMYDQAVK 456

Query: 395 ILEKMADRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           +LE + +++I          +  ++N+ I++LC + +  KA +   R ++   + D   +
Sbjct: 457 LLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKA-DTFFRQLLKKGIQDEVAF 515

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  + G  K  N + A  + + +  + +  D+ SY  L++      +  +A      M +
Sbjct: 516 NNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIE 575

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           NG S  S+ F  ++  L    +V  A R+ +     G +       KI+  L
Sbjct: 576 NGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 108/535 (20%), Positives = 226/535 (42%), Gaps = 23/535 (4%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY-LLEVLFETNRIESALDQFR 226
           V+NV+  A   +K   A   F + E  +AG+  +    ++ ++E+L   +++  A     
Sbjct: 124 VYNVLHAA---KKSEHALNFFRWVE--RAGLFQHDRETHFKIIEILGRASKLNHARCILL 178

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M  KG   +   F ++I+       V ++V I  +M +LG++  +  Y  +   + R  
Sbjct: 179 DMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRG 238

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +   A R F  M    + P   TY  ++     +LRL+ A    EDM   G++P    + 
Sbjct: 239 RYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYN 298

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM--A 400
            ++ G C     +E+  F  +  G   +P    +  +++   +  +   A  + E+M  A
Sbjct: 299 TMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAA 358

Query: 401 DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP-DCATYSAFVLGKCKLCNYE 459
             K  D  +++  +  LC+ E++ +A ++L  MV     P D + +   +  +CK  + +
Sbjct: 359 GEKPNDI-TYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLD 417

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF--------CCMSKNGCSLS 511
            A+ V + +   S+  ++  Y  L+E  C+     +AV++             ++   + 
Sbjct: 418 AAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEME 477

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           +S++N++I  LC   +  KA          G     + +  ++ G  K         +L 
Sbjct: 478 ASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVA-FNNLIRGHAKEGNPDLAFEMLK 536

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M   G + D E+Y +LI+S   + +  D     + M++ G  PD     S++  L    
Sbjct: 537 IMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADG 596

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           ++   S  +N ++      +  +   ++  L+  G   +A   ++L++     PD
Sbjct: 597 RVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPD 651



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 119/521 (22%), Positives = 218/521 (41%), Gaps = 47/521 (9%)

Query: 231 KGCCPNSRT-----FEIVIKGLIAN----SRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           KG  P  R       E +I  ++AN    +R+ +S+  L   FD         +  +  +
Sbjct: 77  KGRIPRGRPRDPEKLEXIICKMMANREWTTRLQNSIRSLVPQFD---------HNLVYNV 127

Query: 282 LCRENKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           L    K E A+  F+ + RA     D  T+ ++I  L    +L+ A  IL DM   G+  
Sbjct: 128 LHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMPNKGVQW 187

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCIL 396
            +D+FV ++    + G   E+V   +   + G   S   ++AL +     G++ +AK   
Sbjct: 188 DEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYF 247

Query: 397 EKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             M +  I     ++N+ +     +  +  A      M    + PD  TY+  + G C+ 
Sbjct: 248 NAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRF 307

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E+A + F ++  +++    ISY+ +++G   V +  +A+ +F  M   G   +  ++
Sbjct: 308 KMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITY 367

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ-RAKDL---LVVLA 571
           + L+ GLC   K+ +A   R +     T +       I + L+  Q +  DL   + VL 
Sbjct: 368 STLLPGLCDAEKLPEA---RKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLK 424

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL-------- 623
            M+      +   Y ILI++  +             +V+  ++   ++ L +        
Sbjct: 425 AMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLI 484

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  L +  Q     +   +L+    + D   +N LI G  KEG    A  +L +M  +G 
Sbjct: 485 IQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGV 543

Query: 684 VPDATTHGLLVGS--SVGEEIDSRRFAFDS----SSFPDSV 718
             DA ++ LL+ S  S GE  D++  A DS       PDS 
Sbjct: 544 SRDAESYKLLIKSYLSKGEPADAKT-ALDSMIENGHSPDSA 583


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 250/568 (44%), Gaps = 38/568 (6%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV--EE 179
           M +  YPN RE   SLV ++      + A ++   M   G +    ++N+ +G+I   EE
Sbjct: 334 MTEGCYPN-REMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEE 392

Query: 180 KRGFADFVFV----YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
             G +D + +    Y EM+  G+V N   ++     L    + + A +    M  KG  P
Sbjct: 393 LPG-SDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVP 451

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           +  T+  VI  L   S+V+ +  +  EM   GI   +  YT +I   C+   +++A   F
Sbjct: 452 DDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWF 511

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
             M   +  P+ +TY  LI+   +  ++ DAN + E M++ G  P    +  ++ G C+ 
Sbjct: 512 DEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKA 571

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP-- 413
           G+ D++        G + S          +   +F       K+ D    DC++ NI   
Sbjct: 572 GQIDKACQIYARMQGDIESS---------DIDMYF-------KLDDN---DCETPNIITY 612

Query: 414 ---IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
              +  LC+   + +A+ELL  M V+   P+   Y A + G CK    E+A  VF ++S 
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           +    +  +YS L+  L + +++   ++V   M +N C+ +   +  +I GLC + K ++
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A RL       G      TYT ++ G  K+ + +  L +   M  +GCA +   Y +LI 
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS--GINKLVSDSE 648
                  L +     + M K    P     +S    + +G     ++S   +++L  +  
Sbjct: 793 HCCSTGLLDEAHRLLDEM-KQTYWPRH---ISSYRKIIEGFNREFITSIGLLDELSENES 848

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLD 676
           V   S+Y ILI+   K G    A  LL+
Sbjct: 849 VPVESLYRILIDNFIKAGRLEGALNLLE 876



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 156/733 (21%), Positives = 289/733 (39%), Gaps = 93/733 (12%)

Query: 21  TSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSAL 80
           TS ++S +   +    S ++ I++    + +  ++  R  LS   ++ V++        +
Sbjct: 58  TSLLNSATTQTSNDALSISNAIRTGFGAETQNFLRQFRGRLSEPLVVEVMNLVKHPEFCV 117

Query: 81  KIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS 140
           + F W S Q  + HT   Y  +I    L  N    + +    + +   + RE L  L+  
Sbjct: 118 EFFLWASRQIGYSHTPVVYNALIEL--LCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF 175

Query: 141 FVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
            +     NG    A+  L  +   G+K S   +N ++   +   +    F+ V++EM  +
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFL-VHREMSNS 234

Query: 197 G--------------------------------IVPNVDTLNYLLEVLFETNRIESALDQ 224
           G                                 VP+    N ++  L E +  + A+D 
Sbjct: 235 GFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDI 294

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
             RM    C PN  T+ I++ G +   ++     IL  M   G       +  ++   C+
Sbjct: 295 LDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCK 354

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE-------DMIVIG 337
                 A +LFK M      P  L Y   I  +C N  L   +D+LE       +M+ +G
Sbjct: 355 SRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEEL-PGSDLLELAEKAYSEMLDLG 413

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           +        +  R LC  GKFD++                                 I E
Sbjct: 414 VVLNKVNVSNFARCLCGAGKFDKAFEI------------------------------ICE 443

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
            M+   + D  +++  I +LC+  ++ KA+ L   M  + +VP   TY+  +   CK   
Sbjct: 444 MMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGL 503

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A   F ++   +   + ++Y+ L+    +  K+ +A ++F  M   G   +  ++  
Sbjct: 504 IQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTA 563

Query: 518 LIYGLCVMRKVDKAIRLRS----------------LAYSSGTSYTTSTYTKIMLGLVKLQ 561
           LI G C   ++DKA ++ +                L  +   +    TY  ++ GL K  
Sbjct: 564 LIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKAN 623

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R ++   +L  M V GC  +   Y  LI    +  KL++    F  M + G  P+  T  
Sbjct: 624 RVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYS 683

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           SL++ L    +L LV   ++K++ +S   +  +Y  +I+GL K G T +A  L+  M   
Sbjct: 684 SLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEV 743

Query: 682 GWVPDATTHGLLV 694
           G  P+  T+  ++
Sbjct: 744 GCYPNVITYTAMI 756



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 156/346 (45%), Gaps = 15/346 (4%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PN+ T   L++ L + NR+E A +    M   GC PN   ++ +I G     +++++  
Sbjct: 606 TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQE 665

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +  +M + G    L  Y+ +I  L +E +L+  +++   M      P+ + Y ++I+ LC
Sbjct: 666 VFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLC 725

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
           +  + ++A  ++  M  +G  P    +  ++ G  ++GK ++ +    D C    +P   
Sbjct: 726 KVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFI 785

Query: 376 -HNALLECCCNAGKFFLAKCILEKMAD----RKIADCDSWNIPIRWLCENEEIRKAYELL 430
            +  L+  CC+ G    A  +L++M      R I+   S+   I     N E   +  LL
Sbjct: 786 TYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHIS---SYRKIIEGF--NREFITSIGLL 840

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS--LVLDSISYSKLVEGLC 488
             +  +  VP  + Y   +    K    E AL +  ++S+     V +   Y+ L+E L 
Sbjct: 841 DELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLS 900

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
              K+ +A E++  M         S+F  LI GL  + K  +A++L
Sbjct: 901 HASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/331 (21%), Positives = 129/331 (38%), Gaps = 55/331 (16%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L++ CC  G + +A   L ++ D    A   ++N  I+     +++  A+ +   M  
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S    D  T   F    CK     DAL +  +   +  V D++ Y+++V GLC+     E
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQE 290

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+++   M    C  +  ++ IL+ G                                 L
Sbjct: 291 AMDILDRMRSISCIPNVVTYRILLSGC--------------------------------L 318

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  +L R K    +L+ M+ EGC  + E +  L+ +  +          F  M+K G  P
Sbjct: 319 GKGQLGRCKR---ILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQP 375

Query: 616 DRETMLSLLHGLADGS-----------QLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
                  LL+ +  GS            L L     ++++    VL+    +     L  
Sbjct: 376 GY-----LLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCG 430

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
            G   +A  ++  M+ KG+VPD +T+  ++G
Sbjct: 431 AGKFDKAFEIICEMMSKGFVPDDSTYSKVIG 461


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 156/675 (23%), Positives = 286/675 (42%), Gaps = 81/675 (12%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  +I  L  +G+V+    +   M  K  +PN+     +++   +   R++ A+ +L N
Sbjct: 377  TYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL-HTYNTMICGLLKARRLDEALELLEN 435

Query: 157  MNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M S G K +   F+ VL      K G  A  +  ++ M K GI+P++   N  L  L ET
Sbjct: 436  MESLGVKPTA--FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAET 493

Query: 216  NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             RI  A D F  +HK G  P+S T+ +++K      ++D +  +L EM   G + ++   
Sbjct: 494  GRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMII 553

Query: 276  TCIIPMLCRENKLEEAIRLF--------------------------KMMRALDLM----- 304
              +I  L +  +++ A ++F                          K+++AL+L      
Sbjct: 554  NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTE 613

Query: 305  ----PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
                P+ +T+  L++CL +N  +D A  +   M ++   P    +  I+ GL   G+ D 
Sbjct: 614  SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673

Query: 361  SVNFLED--------------------KCGYVTSPHNALLE-----CCCNAGKFF--LAK 393
            +  F                       + G V      ++E     C     +F+  L +
Sbjct: 674  AFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELME 733

Query: 394  CIL------EKMADRKIADC------DSWNIP-IRWLCENEEIRKAYELLGRMVVS-SVV 439
            CIL      E ++  +I  C      D   +P I+ LC+ ++   A  +  +   +  + 
Sbjct: 734  CILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIH 793

Query: 440  PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            P   +Y+  + G       E AL +F  + +     ++ +Y+ L++   + ++I +  ++
Sbjct: 794  PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853

Query: 500  FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
            +  M   GC  ++ + NI+I  L     ++KA+ L     S   S T  TY  ++ GL+K
Sbjct: 854  YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913

Query: 560  LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
              R++  + +  +ML  GC  +   Y ILI    +  ++      F  MVK G+ PD ++
Sbjct: 914  AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973

Query: 620  MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
               L+  L    ++        +L       D+  YN +INGL K     +A  L   M 
Sbjct: 974  YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033

Query: 680  GKGWVPDATTHGLLV 694
             +G  PD  T+  L+
Sbjct: 1034 NRGISPDLYTYNALI 1048



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 149/639 (23%), Positives = 260/639 (40%), Gaps = 35/639 (5%)

Query: 52  AKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
            K +  + ++S + ++ +L + +D +SA   FK VS    F HT D    M+  L     
Sbjct: 87  GKRKKNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRR 146

Query: 112 VEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
           +E+M  +   M K+         +++  +      +  A   L  M   GF L+   +N 
Sbjct: 147 IEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNG 206

Query: 172 VLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           ++  ++    GF +    VYK M+  G+ P++ T + L+  L         ++    M  
Sbjct: 207 LIHLLLP---GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKS 263

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
            G  PN  T+ I I+ L    R+DD+  I  EM D G   ++  YT +I  LC   KL++
Sbjct: 264 IGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDK 323

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A  L+  MRA    PD +TY  L++   +   L+       +M V G  P    +  ++ 
Sbjct: 324 AKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIE 383

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW 410
            LC+ G  D + +               +L+     G F                +  ++
Sbjct: 384 ALCKSGDVDRAFD---------------MLDVMTTKGIF---------------PNLHTY 413

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  I  L +   + +A ELL  M    V P   +Y  F+    K  +   A+  F  +  
Sbjct: 414 NTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKK 473

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + ++    + +  +  L +  +I+EA ++F  + K G S  S ++N+L+       ++DK
Sbjct: 474 RGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDK 533

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A +L S   S G          ++  L K  R      +  ++     A  V  Y IL+ 
Sbjct: 534 ATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLT 593

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
            + ++ K+      F  M ++G  P+  T  SLL  L+    + L      ++   +   
Sbjct: 594 GLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNP 653

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           D   YN +I GL +EG    A +    M  K   PD  T
Sbjct: 654 DVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVT 691



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/560 (22%), Positives = 241/560 (43%), Gaps = 44/560 (7%)

Query: 109  AGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
            AG +++   L   M+ K   P+V   + SL+ +     RV+ A ++   + +     +V 
Sbjct: 528  AGQIDKATQLLSEMISKGCEPDVM-IINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVV 586

Query: 168  VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
             +N++L  + +E +     + ++  M ++G  PN  T N LL+ L + + ++ AL  F R
Sbjct: 587  TYNILLTGLGKEGK-ILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645

Query: 228  MHKKGCCPNSRTFEIVIKGLIANSRVD--------------------------------- 254
            M    C P+  T+  +I GLI   R+D                                 
Sbjct: 646  MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRV 705

Query: 255  -DSVSILGEMFDLG-IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
             D++ ++ E      +Q    F+  ++  +  E ++EEAI   +++    +  D+     
Sbjct: 706  EDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLP 765

Query: 313  LINCLCENLRLDDANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI  LC+  +  DA ++ +     +G+ PT + +  ++ GL      ++++   ED    
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 372  VTSPHNALLECCCNA-GKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKA 426
             T P+N       +A GK      + +  ++ +   C+    + NI I  L ++  + KA
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 427  YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +L   ++     P   TY   + G  K    E A+++F ++       +S+ Y+ L+ G
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 487  LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
              +  +I  A E+F  M K G      S+ IL+  LC+  ++D+A++       +G    
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 547  TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
            T +Y  I+ GL K +R  + L + ++M   G + D+  Y  LI  +    K+      + 
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065

Query: 607  VMVKAGLVPDRETMLSLLHG 626
             +   GL P   T  +L+ G
Sbjct: 1066 ELQLVGLEPSVFTYNALIRG 1085



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 138/302 (45%), Gaps = 6/302 (1%)

Query: 150  AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
            A+ +  +M S G   +   +N++L A  + KR       +Y EM   G  PN  T N ++
Sbjct: 815  ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKR-INKLYDLYSEMRSRGCEPNAITHNIII 873

Query: 210  EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
              L ++N +  ALD +  +      P   T+  +I GL+   R + ++ I  EM D G  
Sbjct: 874  SALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCG 933

Query: 270  LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
                 Y  +I    +  +++ A  LFK M    + PD  +Y  L+ CLC   R+D+A   
Sbjct: 934  PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQY 993

Query: 330  LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCN 385
             E++ + GL P    +  I+ GL +  + DE+++   +      SP    +NAL+     
Sbjct: 994  FEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGI 1053

Query: 386  AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            AGK  +A  + E++    +     ++N  IR    +    +A+ +  +M+V    P+  T
Sbjct: 1054 AGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTET 1113

Query: 445  YS 446
            ++
Sbjct: 1114 FA 1115



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 3/212 (1%)

Query: 146  RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDT 204
            R   AM++   M   G   +  ++N+++      K G  DF   ++K+MVK GI P++ +
Sbjct: 916  RSEQAMKIFEEMLDYGCGPNSVIYNILINGF--GKSGEIDFACELFKKMVKEGIRPDLKS 973

Query: 205  LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
               L+E L  T RI+ A+  F  +   G  P++ ++  +I GL  + R+D+++S+  EM 
Sbjct: 974  YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033

Query: 265  DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
            + GI  +L  Y  +I  L    K++ A+++++ ++ + L P   TY  LI     +   D
Sbjct: 1034 NRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKD 1093

Query: 325  DANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
             A  + + M+V+G +P  + F  +       G
Sbjct: 1094 QAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 146/634 (23%), Positives = 261/634 (41%), Gaps = 40/634 (6%)

Query: 44  SHQTTDYEAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADT 98
           S +++D+   +  +R +  PD      + R L +  D  S+   FK V+      HT +T
Sbjct: 63  SMKSSDFSGSM--IRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTET 120

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
              M+  L + G +EEM  +   M K          +++  S      +  A   L  M 
Sbjct: 121 CNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR 180

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
             GF L+   +N ++  +++  R   + + VY+ M+  G  P++ T + L+  L +   I
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKS-RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           +S +   + M   G  PN  TF I I+ L    +++++  IL  M D G   ++  YT +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC   KL+ A  +F+ M+     PD +TY  L++   +N  LD       +M   G 
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
            P    F  +V  LC+ G F E+ +                                L+ 
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFD-------------------------------TLDV 388

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M D+ I  +  ++N  I  L     +  A EL G M    V P   TY  F+    K  +
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
              AL  F ++  + +  + ++ +  +  L +  +  EA ++F  +   G    S ++N+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           ++     + ++D+AI+L S    +G          ++  L K  R  +   +  +M    
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
               V  Y  L+  + +  K+++    F  MV+ G  P+  T  +L   L    ++ L  
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
             + K++    V D   YN +I GL K G   +A
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/565 (21%), Positives = 245/565 (43%), Gaps = 12/565 (2%)

Query: 136  SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
            SL+ +     RV+ A ++ + M     K +V  +N +L  + +  +   + + +++ MV+
Sbjct: 543  SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK-IQEAIELFEGMVQ 601

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             G  PN  T N L + L + + +  AL    +M   GC P+  T+  +I GL+ N +V +
Sbjct: 602  KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELI 314
            ++    +M  L +  +      ++P + + + +E+A ++    +      P  L +E+LI
Sbjct: 662  AMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720

Query: 315  NCLCENLRLDDANDILEDMIVIGL-TPTDDVFVDIVRGLCEVGKFDESVN----FLEDKC 369
              +     +D+A    E ++  G+    D + V I+R  C+      +      F +D  
Sbjct: 721  GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780

Query: 370  GYVTSP-HNALLECCCNAGKFFLAK-CILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
                 P +N L+     A    +A+   L+  +   I D  ++N  +    ++ +I + +
Sbjct: 781  VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840

Query: 428  ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEG 486
            EL   M       +  T++  + G  K  N +DAL ++  + S +     + +Y  L++G
Sbjct: 841  ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900

Query: 487  LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            L +  ++ EA ++F  M   GC  + + +NILI G     + D A  L       G    
Sbjct: 901  LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960

Query: 547  TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              TY+ ++  L  + R  + L    ++   G   DV  Y ++I  + + ++L++  + FN
Sbjct: 961  LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020

Query: 607  VM-VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M    G+ PD  T  SL+  L     +       N++       +   +N LI G    
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080

Query: 666  GLTSQASYLLDLMLGKGWVPDATTH 690
            G    A  +   M+  G+ P+  T+
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTY 1105



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 148/687 (21%), Positives = 283/687 (41%), Gaps = 81/687 (11%)

Query: 53  KIQSLRHNLSPDHL--IRVLDNTNDLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGL 108
           K+++ RH   PD +  I +LD  +D      + ++ S  ++  H  D  T+  ++  L  
Sbjct: 318 KMKTGRH--KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375

Query: 109 AGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
           AGN  E       M  +   PN+     +L+   +  +R++ A+ +  NM S G K +  
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNL-HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            + V +    +     +     +++M   GI PN+   N  L  L +  R   A   F  
Sbjct: 435 TYIVFIDYYGKSGDSVSALE-TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           +   G  P+S T+ +++K       +D+++ +L EM + G + ++     +I  L + ++
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++EA ++F  M+ + L P  +TY  L+  L +N ++ +A ++ E M+  G  P    F  
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF-- 611

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IAD 406
                                        N L +C C   +  LA  +L KM D   + D
Sbjct: 612 -----------------------------NTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  I  L +N ++++A     +M    V PD  T    + G  K    EDA ++  
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701

Query: 467 Q--------------------VSAQSLVLDSISYSK--LVEGLCQ-VEKITEAVEVFCCM 503
                                + A++ + +++S+S+  +  G+C+  + I   +  + C 
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK 761

Query: 504 SKN---------------GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
             N               G      ++N+LI GL     ++ A  +     S+G     +
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA-LFFNV 607
           TY  ++    K  +  +L  +  +M    C  +   + I+I  + +   + D   L++++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M      P   T   L+ GL+   +L+        ++      + ++YNILING  K G 
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
              A  L   M+ +G  PD  T+ +LV
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLV 968



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 119/570 (20%), Positives = 223/570 (39%), Gaps = 83/570 (14%)

Query: 64   DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            + LI  L   + +  A K+F  +  + + + T  TY  ++  LG  G ++E   L + MV
Sbjct: 542  NSLINTLYKADRVDEAWKMFMRMK-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600

Query: 124  KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
            ++  P       +L      +  V  A+++L  M   G    V  +N ++  +V  K G 
Sbjct: 601  QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV--KNGQ 658

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEI 242
                  +   +K  + P+  TL  LL  + + + IE A       ++     P +  +E 
Sbjct: 659  VKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWED 718

Query: 243  VIKGLIANSRVDDSVSI-----------------------------------LGEMF--D 265
            +I  ++A + +D++VS                                    L E F  D
Sbjct: 719  LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778

Query: 266  LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            LG+Q +L  Y  +I  L   + +E A  +F  +++   +PD  TY  L++   ++ ++D+
Sbjct: 779  LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838

Query: 326  ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-----KCGYVTSPHNALL 380
              ++ ++M              ++ GL + G  D++++   D             +  L+
Sbjct: 839  LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898

Query: 381  ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            +    +G+ + AK + E M D     +C  +NI I    +  E   A  L  RMV   V 
Sbjct: 899  DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958

Query: 440  PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            PD  TYS  V   C +   ++ L  F+++    L  D + Y+ ++ GL +  ++ EA+ +
Sbjct: 959  PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018

Query: 500  FCCM------------------------------------SKNGCSLSSSSFNILIYGLC 523
            F  M                                     + G   +  +FN LI G  
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078

Query: 524  VMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            +  K + A  +     + G S  T TY ++
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 15/280 (5%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATY-----SAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
           EE+   ++L+ + ++     D  TY     S  V G  K   Y  ALR  R+      VL
Sbjct: 135 EEMAYVFDLMQKRIIKR---DTNTYLTIFKSLSVKGGLKQAPY--ALRKMREFG---FVL 186

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           ++ SY+ L+  L +    TEA+EV+  M   G   S  +++ L+ GL   R +D  + L 
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               + G      T+T  +  L +  +  +   +L +M  EGC  DV  Y +LI ++   
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306

Query: 596 NKLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            KL DCA   F  M      PDR T ++LL   +D   L  V    +++  D  V D   
Sbjct: 307 RKL-DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + IL++ L K G   +A   LD+M  +G +P+  T+  L+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 141/323 (43%), Gaps = 19/323 (5%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+N  I  L ++    +A E+  RM++    P   TYS+ ++G  K  + +  + + +++
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               L  +  +++  +  L +  KI EA E+   M   GC     ++ +LI  LC  RK+
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV---LAQMLVEGCALDVEAY 585
           D A  +     +        TY  +   L +    +DL  V    ++M  +G   DV  +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITL---LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            IL+ ++ +     +     +VM   G++P+  T  +L+ GL    ++H +   + +L  
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL---RVHRLDDAL-ELFG 422

Query: 646 DSEVLD----SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD--ATTHGLLVGSSVG 699
           + E L     +  Y + I+   K G +  A    + M  KG  P+  A    L   +  G
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482

Query: 700 EEIDSRRFAF---DSSSFPDSVS 719
            + ++++  +   D    PDSV+
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVT 505


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 128/553 (23%), Positives = 227/553 (41%), Gaps = 40/553 (7%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           +N A +    + + G  LS    N+ L  +  ++      + V+ E  + G+  N ++ N
Sbjct: 55  LNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYN 114

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+  LF   +I  A     RM  KGC P+  ++  +I G      +   V ++ EM   
Sbjct: 115 ILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLK 174

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G++  L  Y+ II +LC+  K+ E  ++ + M    + PD + Y  LI+  C+      A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
             +  +M    + P    F  ++ GL   GK  E+     +       P    + AL++ 
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294

Query: 383 CCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+   A  +  +M    +  +  ++      LC++ E+  A ELL  M    +  +
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
            +TY+  V G CK  N   A+++  ++    L  D+I+Y+ L++   +  ++ +A E+  
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M   G   +  +FN+L+ GLC+  K++   RL       G     +TY  IM       
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM------- 467

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
                                + YCI       +N ++     +  M   G+VPD  T  
Sbjct: 468 ---------------------KQYCI-------RNNMRISTEIYRGMCAQGVVPDSNTYN 499

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            L+ G      +        ++V     L +S YN LI G +K     +A  L + M  +
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRRE 559

Query: 682 GWVPDATTHGLLV 694
           G V  A  + L V
Sbjct: 560 GLVASAEIYNLFV 572



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 190/428 (44%), Gaps = 43/428 (10%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +IL L  +G V E E + + M+K           +L+  F        A ++   M
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241

Query: 158 NSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            +         F+ ++      G +VE  +       ++ EM+K G  P+  T   L++ 
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADK-------LFNEMIKKGFEPDEVTYTALIDG 294

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +   ++ A     +M + G  PN  T+  +  GL  +  +D +  +L EM   G+QL 
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +S Y  I+  LC+   + +A++L + M+   L PD +TY  L++   +   +  A ++L 
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
           +M+  GL PT   F  ++ GLC  GK ++    L                      K+ L
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLL----------------------KWML 452

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            K I+   A        ++N  ++  C    +R + E+   M    VVPD  TY+  + G
Sbjct: 453 EKGIMPNAA--------TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG 504

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK  N ++A  + +++  +   L + SY+ L++G  + +K+ EA ++F  M + G   S
Sbjct: 505 HCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVAS 564

Query: 512 SSSFNILI 519
           +  +N+ +
Sbjct: 565 AEIYNLFV 572


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 222/498 (44%), Gaps = 10/498 (2%)

Query: 222  LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            L  FR M   G  P+ +    V++ L   +R DD  ++  EM +LGI+  +  Y  ++  
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 282  LCRENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              +E + ++   L K M  R    +P+++TY  +I  L     L++A +++E M  +   
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKK 1187

Query: 340  PTDDVFVDIVRGL----CEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
             +   +  ++ GL    C    +D  +    +        +NA++     +G    A+  
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 396  LEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
              +M A   + D  ++N  +   C+   +++A  L G +  + + P   TY+  + G C+
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 455  LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
            L + E+A  +  ++  Q  + +  +Y+ L++G   V  +  A E F  M   G      +
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 515  FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
            +N  I    ++  + +A  LR +    G S  T TY  ++ GL K    KD   +  +M+
Sbjct: 1368 YNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427

Query: 575  VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
              G   D   Y  LI +  E+  L++    FN M+  GL+P   T   ++H       L+
Sbjct: 1428 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLY 1487

Query: 635  LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                   K++ +    +   YN+LI+ L + G T  AS+    ML +G V +  T+ LL+
Sbjct: 1488 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 1547

Query: 695  GSS--VGEEIDSRRFAFD 710
              +  VG   D+ RF F+
Sbjct: 1548 DGNCKVGNWEDAMRFYFE 1565



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 223/521 (42%), Gaps = 43/521 (8%)

Query: 157  MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
            M S G    V   N VL  + +  R + D   V++EM++ GI P++ T N LL+   +  
Sbjct: 1075 MASHGVAPDVKDCNRVLRVLRDAAR-WDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133

Query: 217  RIESALDQFRRMHKK--GCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----------- 263
            R +      + M  +  GC PN  T+ +VI GL     ++++  ++  M           
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTY 1193

Query: 264  ----------------FDLGIQLE-------LSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
                            +DL +++E       +  Y  +I  L +   +E A   F  MRA
Sbjct: 1194 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 1253

Query: 301  LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
            + L+PD +TY  L+N  C+   L +A  +  D+   GL PT   +  ++ G C +G  +E
Sbjct: 1254 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 1313

Query: 361  SV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
            +        E  C      +  L++   N     +A+   ++M  + +  DC ++N  I 
Sbjct: 1314 ARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRIC 1373

Query: 416  WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
                  +I +A+EL   +++  +  D  TY+  + G CK  N +DA  +  ++ +  L  
Sbjct: 1374 AELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 1433

Query: 476  DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
            D I+Y+ L+   C+   + EA ++F  M  +G   S+ +F ++I+  C    +  A    
Sbjct: 1434 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 1493

Query: 536  SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                  G      TY  ++  L ++ R +       +ML  G   +   Y +LI    + 
Sbjct: 1494 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 1553

Query: 596  NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
               +D   F+  M + G+ PD  T  +LL G  DG   H +
Sbjct: 1554 GNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF-DGHVHHTI 1593



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 181/430 (42%), Gaps = 14/430 (3%)

Query: 66   LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
            +I  L    DL  A ++ + + + K+   ++ TY  +I  L   G V+++  L   M  E
Sbjct: 1162 VITGLTRKGDLEEAAELVEGMRLSKK--ASSFTYNPLITGLLARGCVKKVYDLQLEMENE 1219

Query: 126  RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                      +++   +    V  A      M + G    V  +N +L    +      +
Sbjct: 1220 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG-NLKE 1278

Query: 186  FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
             + ++ ++ +AG+ P V T N L++       +E A      M ++GC PN  T+ I++K
Sbjct: 1279 ALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 1338

Query: 246  GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL---D 302
            G +    +  +     EM   G+Q +   Y   I   C E  L +  R F++   L    
Sbjct: 1339 GSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGDIARAFELREVLMLEG 1395

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +  D +TY  LI+ LC+   L DA ++   M+  GL P    +  ++   CE G   E+ 
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 1455

Query: 363  ----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWL 417
                N + D           ++   C  G  + A     KM +  +   + ++N+ I  L
Sbjct: 1456 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            C     + A      M+   +V +  TY+  + G CK+ N+EDA+R + ++    +  D 
Sbjct: 1516 CRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDY 1575

Query: 478  ISYSKLVEGL 487
            +++  L++G 
Sbjct: 1576 LTHKALLKGF 1585


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 202/474 (42%), Gaps = 30/474 (6%)

Query: 82  IFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY---PNVREALIS-- 136
            FKWV      +H+  +   MI  L      +  + L + +    Y   P+V  A++   
Sbjct: 61  FFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIH 120

Query: 137 ------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
                       LV  + N      A++V  +M   GFK  +    V+L ++ + +    
Sbjct: 121 DDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR--LT 178

Query: 185 DFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           + V+ VYK+MV+ G+VPN+   N L+    ++  +E A      M  +   P+  T+  +
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I          +++ I   M   G+  ++  Y  +I   CRE ++ EA+RLF+ +     
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREING--A 296

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+ +TY  LI+  C    L++A  + E M V GL P    +  I+R LCE GK  ++  
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356

Query: 364 FLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
            L +       P     N L+   C  G    A  + +KM +  +  D  ++   I   C
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +  E+  A E L  M+ +   P  +TYS  V       N E  +R+  ++S + L +D  
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDIS 476

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            Y  L+  LC+++KI  A  +F  M   G    S  +  L Y      K  KAI
Sbjct: 477 VYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYF---KAGKAI 527



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 169/431 (39%), Gaps = 45/431 (10%)

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++AI++F+ MR     P       L+N L +    +    + + M+ +G+ P   +F   
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF--- 200

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                       N L+  CC +G    A+ +L +M  R I  D 
Sbjct: 201 ----------------------------NVLIHACCKSGDVEKAEQLLNEMESRFIFPDL 232

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N  I   C+     +A  +  RM    V PD  TY++ + G C+     +ALR+FR+
Sbjct: 233 FTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE 292

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++  +   + ++Y+ L++G C+V  + EA+ +   M   G      ++N ++  LC   K
Sbjct: 293 INGATP--NHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK 350

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  A RL +            T   ++    K+      + V  +ML  G   D   +  
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKA 410

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI    + +++     F   M+ AG  P   T   L+    D      V    ++L    
Sbjct: 411 LIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKG 470

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL-----------VGS 696
             +D S+Y  LI  L K      A  +  LM GKG   D+  +  L             S
Sbjct: 471 LFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAAS 530

Query: 697 SVGEEIDSRRF 707
            + +E+D RR 
Sbjct: 531 DMLDEMDKRRL 541



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 39/286 (13%)

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           +++  +MV   VVP+   ++  +   CK  + E A ++  ++ ++ +  D  +Y+ L+  
Sbjct: 182 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL 241

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C+     EA+ +   M + G S    ++N LIYG C   ++ +A+RL      +G +  
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRL--FREINGATPN 299

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TYT ++ G  ++   ++ L +   M VEG    V  Y  +++ + E+ K+KD     N
Sbjct: 300 HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 359

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M +  + PD  T                                    N LIN   K G
Sbjct: 360 EMSERKVEPDNVTC-----------------------------------NTLINAYCKIG 384

Query: 667 LTSQASYLLDLMLGKGWVPDA-TTHGLLVGSSVGEEIDS-RRFAFD 710
               A  +   ML  G  PD  T   L+ G     E+DS + F F+
Sbjct: 385 DMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFE 430



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 4/225 (1%)

Query: 146 RVNG---AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
           RVN    A+R+   M   G    V  +N +L  + EE +   D   +  EM +  + P+ 
Sbjct: 312 RVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK-IKDANRLLNEMSERKVEPDN 370

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T N L+    +   + SA+   ++M + G  P+  TF+ +I G      VD +   L E
Sbjct: 371 VTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFE 430

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D G     S Y+ ++     ++  E  IRL   +    L  D   Y  LI  LC+  +
Sbjct: 431 MLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDK 490

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           ++ A  I   M   G+     V+  +     + GK   + + L++
Sbjct: 491 IESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 72/145 (49%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V K+M++AG+ P+  T   L+    + + ++SA +    M   G  P+  T+  ++    
Sbjct: 392 VKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYY 451

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                +  + +  E+   G+ +++S Y  +I  LC+ +K+E A R+F +M+   +  D +
Sbjct: 452 DQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSV 511

Query: 309 TYEELINCLCENLRLDDANDILEDM 333
            Y  L     +  +   A+D+L++M
Sbjct: 512 VYTSLAYAYFKAGKAIAASDMLDEM 536


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 215/471 (45%), Gaps = 9/471 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           VF+ +LGAIV     +   + ++ ++   GI P++ TL  L+        +  A      
Sbjct: 57  VFDKLLGAIVRMGH-YPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGT 115

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + K G  PN  TF  +I G   N  V  +++   ++   G  L+   Y  +I  LC+  +
Sbjct: 116 ILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQ 175

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             +A++L + M    + P+ +TY  +I+ LC++  + DA  +   +   G+      +  
Sbjct: 176 TRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNS 235

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR- 402
           ++ G C VG++ E+   L        +P     N L++  C  G+   A+ +   M  R 
Sbjct: 236 LIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRG 295

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  D  ++N  +   C +  + +A EL  RMV   + PD   Y+  + G CK+   ++A+
Sbjct: 296 EKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAM 355

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F+++  ++LV +  +Y+ L++GLC++ +++   E+   M   G S    ++NI +   
Sbjct: 356 VLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAF 415

Query: 523 CVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           C  +  +KAI L R +    G       Y  I+    K ++ K     L  +L+ GC  +
Sbjct: 416 CKSKPYEKAISLFRQIV--QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPN 473

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           V  Y I+I ++ +     +     + M      PD  T  +++  L + ++
Sbjct: 474 VRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNE 524



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 214/501 (42%), Gaps = 8/501 (1%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +V    +L    F T  ++  L  F RM +K   P    F+ ++  ++       ++S+ 
Sbjct: 21  HVRFFGHLHPPKFHT--VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLF 78

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            ++   GI   ++  T +I   C +  L  A  L   +  +   P+ +T+  LIN  C N
Sbjct: 79  SQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCIN 138

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
             +  A     D++  G    +  +  ++ GLC+ G+  +++  L+     +  P    +
Sbjct: 139 GMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITY 198

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           + +++  C       A  +   +  R I  D  ++N  I   C   + R+A  LL  MV 
Sbjct: 199 STVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVR 258

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
            ++ PD  T++  V   CK     +A  VF  +  +    D ++Y+ L+EG C    ++E
Sbjct: 259 GNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSE 318

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E+F  M K G      ++N+LI G C +  VD+A+ L             +TY  ++ 
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLID 378

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL KL R   +  ++ +M   G + D+  Y I + +  +    +     F  +V+ G+ P
Sbjct: 379 GLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWP 437

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D      ++     G +L +    +  L+      +   Y I+IN L K+    +A  LL
Sbjct: 438 DFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLL 497

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             M      PDA T   ++G+
Sbjct: 498 SKMDDNDCPPDAVTFETIIGA 518



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 142/304 (46%), Gaps = 31/304 (10%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV+  I P+  T N L++ L +  RI  A   F  M K+G  P+  T+  +++G   ++ 
Sbjct: 256 MVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNN 315

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V ++  +   M   G++ ++  Y  +I   C+ + ++EA+ LFK +R  +L+P+  TY  
Sbjct: 316 VSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNS 375

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ LC+  R+    +++++M   G +P      DIV                       
Sbjct: 376 LIDGLCKLGRMSCVQELVDEMCDRGQSP------DIVT---------------------- 407

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
              +N  L+  C +  +  A  +  ++      D   +++ +   C+ E+++ A E L  
Sbjct: 408 ---YNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQH 464

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +++    P+  TY+  +   CK C++++A+ +  ++       D++++  ++  L +  +
Sbjct: 465 LLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNE 524

Query: 493 ITEA 496
             +A
Sbjct: 525 TDKA 528



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 96/199 (48%), Gaps = 9/199 (4%)

Query: 119 CQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE 178
           C+N+V    PN+     SL+       R++    ++  M   G    +  +N+ L A  +
Sbjct: 363 CKNLV----PNL-ATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCK 417

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            K  +   + +++++V+ GI P+    + ++E   +  +++ A +  + +   GCCPN R
Sbjct: 418 SK-PYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVR 475

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ I+I  L  +   D+++++L +M D     +   +  II  L   N+ ++A +L   M
Sbjct: 476 TYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535

Query: 299 RALDLMPDE--LTYEELIN 315
               L+ DE  L +E+  N
Sbjct: 536 IERGLVNDEARLVHEQXGN 554


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 129/566 (22%), Positives = 249/566 (43%), Gaps = 47/566 (8%)

Query: 167 DVF--NVVLGAIVEE-KRGFADFVFVYKEMVKAGIV--PNVDTLNYLLEVLFETNRIESA 221
           DVF  N++L ++  + K G AD +   + M + G V  P+V   N +++  F+   +  A
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLL--RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            D F+ M ++G  P+  T+  V+  L     +D + + L +M + G+  +   Y  +I  
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
                + +EA+R+FK MR   ++PD +    L+  LC+  ++ +A D+ + M + G  P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  ++ G    G   +  +  +   G   +P     N L++   N G    A  I  
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M D  +     ++   I  LC   ++  A E   +M+   VVPD   Y   + G C   
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           +   A  +  ++    + LD + +  ++  LC++ ++ +A  +F      G    +  +N
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           +L+ G C++ K++KA+R+     S+G       Y  ++ G  K+ R  + L +  +ML +
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL--------- 627
           G       Y I+I  + E  +     + F+ M ++G+  ++ T   +L GL         
Sbjct: 601 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660

Query: 628 -------------ADGSQLHLVSSGI--NKLVSDSEVLDSSM-----------YNILING 661
                         D   L+ + +G+   + V +++ L +S+           Y+I+I  
Sbjct: 661 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDA 687
           L KEGL  +A  +   M   G  PD+
Sbjct: 721 LLKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 194/435 (44%), Gaps = 10/435 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + YT  I M C  R ++ E A+  F  +    L  D +    L+   CE  R D+A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           DIL      +G  P    +  +++ LC  GK  ++ + L    + G V SP    +N ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G    A  + ++M  R I  D  +++  +  LC+   + KA   L +MV   V+
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G      +++A+RVF+++  QS++ D ++ + L+  LC+  KI EA +V
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G +    S+ I++ G      +     L  L    G +    T+  ++     
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                  +++  +M   G    V  Y  +I ++    K+ D    FN M+  G+VPD+  
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G      L      I++++++   LD   +  +IN L K G    A  + DL +
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 680 GKGWVPDATTHGLLV 694
             G  PDA  + +L+
Sbjct: 529 NVGLHPDAVVYNMLM 543



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/475 (22%), Positives = 216/475 (45%), Gaps = 21/475 (4%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           L  N + ++LI    +T     A+++FK +  Q            ++  L   G ++E  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV-ALNTLMGSLCKYGKIKEAR 346

Query: 117 GLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN----MNSGGFKLSVDVFNV 171
            +   M +K + P+V    I L     N Y   G +  + +    M   G    +  FNV
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIML-----NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 401

Query: 172 VLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           ++ A      G  D  + ++ EM   G+ P+V T   ++  L    +++ A+++F +M  
Sbjct: 402 LIKAYANC--GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           +G  P+   +  +I+G   +  +  +  ++ E+ + G++L++ F+  II  LC+  ++ +
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMD 519

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A  +F +   + L PD + Y  L++  C   +++ A  + + M+  G+ P    +  +V 
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA- 405
           G C++G+ DE ++   +       P    +N +++    AG+   AK    +M +  IA 
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
             C +++I +R L +N    +A  L   +   +V  D  T +  + G  +    E+A  +
Sbjct: 640 NKC-TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           F  +S   LV  +++YS ++  L +   + EA ++F  M   GC   S   N ++
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 117/542 (21%), Positives = 220/542 (40%), Gaps = 51/542 (9%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P   T   L++     +R E AL  F ++ + G   ++     ++KG     R D+++ I
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 260 -LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM-------------------- 298
            L    +LG   ++  Y  ++  LC + K  +A  L +MM                    
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 299 --------RALDLM---------PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
                   +A DL          PD +TY  +++ LC+   +D A   L  M+  G+ P 
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILE 397
           +  + +++ G    G++ E+V   ++       P     N L+   C  GK   A+ + +
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 398 KMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            MA + +  D  S+ I +        +    +L   M+   + PD  T++  +       
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             + A+ +F ++    +    ++Y  ++  LC++ K+ +A+E F  M   G      +++
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI G C    + KA  L S   ++G       +  I+  L KL R  D   +    +  
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ---- 632
           G   D   Y +L+       K++     F+ MV AG+ P+     +L++G     +    
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L L    + K +  S +L    YNI+I+GL++ G T  A      M   G   +  T+ +
Sbjct: 591 LSLFREMLQKGIKPSTIL----YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 693 LV 694
           ++
Sbjct: 647 VL 648



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 1/133 (0%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K+ +   N ++  + + +R   +   ++  + ++G+VP   T + ++  L +   +E A 
Sbjct: 673 KIDIITLNTMIAGMFQTRR-VEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAE 731

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           D F  M   GC P+SR    V++ L+  + +  + + L ++ +    LE      ++ + 
Sbjct: 732 DMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 791

Query: 283 CRENKLEEAIRLF 295
             +    E IR  
Sbjct: 792 SSKGTCREQIRFL 804


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 134/589 (22%), Positives = 258/589 (43%), Gaps = 22/589 (3%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  ++  L   G V E   L   M ++  P       S++ +      V+ A  +L  M 
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV 273

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
             G +     +N ++       + +   V ++KEM   G++PN  T +  +  L +  RI
Sbjct: 274 GNGVQPDNVTYNTLIHGYSTLGQ-WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRI 332

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E A + F  M  KG   N  ++  ++ G      + D  ++   M   GI      +  +
Sbjct: 333 EEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNIL 392

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +    +   + EA+ +F+ M+   L PD LTY  +I+  C    +DDA D    MI  G+
Sbjct: 393 VNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV 452

Query: 339 TPTDDVFVDIVRGLCEVG---KFDESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAKC 394
            P   V+  +++G C  G   K +E V  + +K  G       +L+   C  G+ F A+ 
Sbjct: 453 EPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQR 512

Query: 395 ILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           I + +    + AD + +   I   C   ++ +A+ +   MV   + PD  TY   V G C
Sbjct: 513 IFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCC 572

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    +D L +FR++  + +   + +Y  +++GL    +   A E+F  M ++G +++  
Sbjct: 573 KNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIP 632

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +++IL+ GLC     ++AI +     +    +       ++  + K +R ++   + A +
Sbjct: 633 TYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASI 692

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              G    V+ Y I+++++ ++  +++    F+VM+K+GL P                  
Sbjct: 693 PDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTS---------------- 736

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           H ++  +  L+   E++ + +Y   ++G       S AS LL L   KG
Sbjct: 737 HFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKG 785



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/538 (22%), Positives = 231/538 (42%), Gaps = 6/538 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP-NVDTLNYLLEVLFETNRIESALDQFRR 227
           ++ VL ++ ++ R       +   + + G  P NV   + ++  LF+  ++  A D F  
Sbjct: 177 YSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHE 236

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M ++G  PN  T+  VI  L     VD +  IL +M   G+Q +   Y  +I       +
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            ++A+R+FK M +  ++P+ +T    +  LC++ R+++A +  + M+  G       +  
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356

Query: 348 IVRGLCEVGKFDESVNF--LEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G    G   +  N   L  + G V + H  N L+      G    A  I E M  R 
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  D  ++   I   C    +  A +    M+   V P+ A Y   + G C   +   A 
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE 476

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++  + L    +S++ L+  LC+  ++ EA  +F  + + G     + F  LI G 
Sbjct: 477 ELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGY 536

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C++ K+ +A R+     S G      TY  ++ G  K  R  D L++  ++L +G     
Sbjct: 537 CLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTT 596

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y I++  +    +       F  M+++G+     T   LL GL   +      +   K
Sbjct: 597 FTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQK 656

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           L + +   D  + NI+I+ ++K     +A  L   +   G VP   T+ +++ + + E
Sbjct: 657 LCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKE 714



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 118/539 (21%), Positives = 229/539 (42%), Gaps = 10/539 (1%)

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
             GG   +V V++ V+  + +E +   +   ++ EM + G+ PNV T N ++  L +   
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGK-VGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A    R+M   G  P++ T+  +I G     +   +V +  EM   G+       + 
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            +  LC+  ++EEA   F  M A     + ++Y  L++       L D +++   M+  G
Sbjct: 322 FVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG 381

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           + P   VF  +V G  + G   E++   ED      +P    + A++   C  G    A 
Sbjct: 382 IVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAM 441

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
                M D+ +  +   +   I+  C + ++ KA EL+  +    + P   ++++ +   
Sbjct: 442 DKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHL 501

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK     +A R+F  +       D   ++ L++G C + K++EA  V   M   G     
Sbjct: 502 CKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDI 561

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++  L+ G C   ++D  + L       G   TT TY  I+ GL    R      +  +
Sbjct: 562 VTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQE 621

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+  G A+ +  Y IL+  +   N  ++    F  +    +  D   +L+++      ++
Sbjct: 622 MIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD-IVILNIMISKMFKAR 680

Query: 633 LHLVSSGINKLVSDSEVLDS-SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
               + G+   + D  ++ +   Y I++  L KEG   +A  +  +ML  G  P  T+H
Sbjct: 681 RREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSP--TSH 737



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 200/498 (40%), Gaps = 68/498 (13%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR- 293
           P   T+ I+I       R+D + +  G +   G++ ++   + ++  LC   + +EA+  
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV--DIVRG 351
           LF  M  L  +PD ++Y  ++  +C++ R   A DIL   +  G     +V V   +V G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
           L + GK  E+ +   +       P                              +  ++N
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPP------------------------------NVVTYN 250

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I  LC+   + KA  +L +MV + V PD  TY+  + G   L  ++ A+R+F++++++
Sbjct: 251 SVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSR 310

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            ++ ++++ S  V  LC+  +I EA E F  M   G  L+  S++ L++G      +   
Sbjct: 311 GVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDM 370

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             L +L    G       +  ++ G  K    ++ + +   M   G   DV  Y  +I +
Sbjct: 371 SNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHA 430

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL------------------ 633
                 + D    FN M+  G+ P+      L+ G      L                  
Sbjct: 431 FCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPC 490

Query: 634 ---------HLVSSG--------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                    HL   G         + ++   E  D +++  LI+G    G  S+A  + D
Sbjct: 491 ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHD 550

Query: 677 LMLGKGWVPDATTHGLLV 694
            M+  G  PD  T+G LV
Sbjct: 551 AMVSVGIEPDIVTYGTLV 568


>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Glycine max]
          Length = 733

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 140/652 (21%), Positives = 282/652 (43%), Gaps = 24/652 (3%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           TT  +  I+SL     P  +  VL        AL+ ++WV     F HT +T  K++  L
Sbjct: 70  TTRLQNSIRSLVPEFDPSLVYNVLHGAASPEHALQFYRWVERAGLFTHTPETTLKIVQIL 129

Query: 107 GLAGNVEEMEGLCQNMVK---ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
           G    +     +  N  +    R     +A +SL+ S+     V  ++++   M   G  
Sbjct: 130 GRYSKLNHARCILFNDTRGGVSRAAVTEDAFVSLIDSYGRAGIVQESVKLFKKMKELGLD 189

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            +V  ++ +   I+   R      + Y  M+  G+ P   T N LL  +F + R+++A+ 
Sbjct: 190 RTVKSYDALFKVILRRGRYMMAKRY-YNAMLLEGVDPTRHTFNILLWGMFLSLRLDTAVR 248

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            +  M  +G  P+  T+  +I G     +VD++  +  EM    I   +  +T ++    
Sbjct: 249 FYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYV 308

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
              ++++A+++F+ M+   + P+ +T+  L+  LC+  ++ +A D+L +M+   + P D+
Sbjct: 309 AAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDN 368

Query: 344 -VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLAKCILE 397
            +F+ ++   C+ G  D + + L+     ++ P  A     L+E  C A  +  A+ +L+
Sbjct: 369 ALFMKMMSCQCKAGDLDAAADVLKAMV-RLSIPTEAGHYGVLIESFCKANVYDKAEKLLD 427

Query: 398 KMADRKIA---------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           K+ +++I          +  ++N+ I +LCE+    KA E   R ++   V D   ++  
Sbjct: 428 KLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKA-ETFFRQLLKKGVQDSVAFNNL 486

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  K  N + A  + + +  + +  D  SY  L+E   +  +  +A      M ++G 
Sbjct: 487 IRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGH 546

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
              SS +  ++  L    +V  A R+       G         KI+  L+     ++ L 
Sbjct: 547 LPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEALG 606

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            +  ++  GC  D +    L+  + E+ K        + +++   + D      +L  L 
Sbjct: 607 RIDLLMHNGCEPDFDH---LLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALL 663

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
              +     S + K++      D S  + LI  L +EG T QA  L  ++ G
Sbjct: 664 AAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMIKG 715


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 222/498 (44%), Gaps = 10/498 (2%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           L  FR M   G  P+ +    V++ L   +R DD  ++  EM  LGI+  +  Y  ++  
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 282 LCRENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             +E + ++   L K M  R    +P+++TY  +I  L     L++A +++E M  +   
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKK 272

Query: 340 PTDDVFVDIVRGL----CEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            +   +  ++ GL    C    +D  +    +        +NA++     +G    A+  
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 396 LEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
             +M A   + D  ++N  +   C+   +++A  L G +  + + P   TY+  + G C+
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L + E+A  +  ++  Q  + +  +Y+ L++G   V  +  A E F  M   G      +
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFA 452

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N  I    ++  + +A+ LR +    G S  T TY  ++ GL K    KD   +  +M+
Sbjct: 453 YNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 512

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D   Y  LI +  E+  L++    FN M+  GL+P   T   ++H       L+
Sbjct: 513 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLY 572

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                  K++ +    +   YN+LI+ L + G T  AS+    ML +G V +  T+ LL+
Sbjct: 573 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 632

Query: 695 GSS--VGEEIDSRRFAFD 710
             +  VG   D+ RF F+
Sbjct: 633 DGNCKVGNWEDAMRFYFE 650



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 222/521 (42%), Gaps = 43/521 (8%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G    V   N VL A+ +  R + D   V++EM++ GI P++ T N LL+   +  
Sbjct: 160 MASHGVAPDVKDCNHVLRALRDAAR-WDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEG 218

Query: 217 RIESALDQFRRMHKK--GCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----------- 263
           R +      + M  +  GC PN  T+ +VI GL     ++++  ++  M           
Sbjct: 219 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTY 278

Query: 264 ----------------FDLGIQLE-------LSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
                           +DL +++E       +  Y  +I  L +   +E A   F  MRA
Sbjct: 279 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 338

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           + L+PD +TY  L+N  C+   L +A  +  D+   GL PT   +   + G C +G  +E
Sbjct: 339 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEE 398

Query: 361 SV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
           +        E  C      +  L++   N     +A+   ++M  + +  DC ++N  I 
Sbjct: 399 ARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRIC 458

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
                 +I +A EL   +++  +  D  TY+  + G CK  N +DA  +  ++ +  L  
Sbjct: 459 AELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 518

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D I+Y+ L+   C+   + EA ++F  M  +G   S+ +F ++I+  C    +  A    
Sbjct: 519 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 578

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                 G      TY  ++  L ++ R +       +ML  G   +   Y +LI    + 
Sbjct: 579 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 638

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
              +D   F+  M + G+ PD  T  +L+ G  DG   H +
Sbjct: 639 GNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF-DGHVHHTI 678



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 179/430 (41%), Gaps = 14/430 (3%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L    DL  A ++ + + + K+   ++ TY  +I  L   G V+++  L   M  E
Sbjct: 247 VITGLTRKGDLEEAAELVEGMRLSKKA--SSFTYNPLITGLLARGCVKKVYDLQLEMENE 304

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
                     +++   +    V  A      M + G    V  +N +L    +      +
Sbjct: 305 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN-LKE 363

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + ++ ++ +AG+ P V T N  ++       +E A      M ++GC PN  T+ I++K
Sbjct: 364 ALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 423

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL---D 302
           G +    +  +     EM   G+Q +   Y   I   C E  L +  R  ++   L    
Sbjct: 424 GSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGDIARALELREVLMLEG 480

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           +  D +TY  LI+ LC+   L DA ++   M+  GL P    +  ++   CE G   E+ 
Sbjct: 481 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 540

Query: 363 ----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWL 417
               N + D           ++   C  G  + A     KM +  +   + ++N+ I  L
Sbjct: 541 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 600

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C     + A      M+   +V +  TY+  + G CK+ N+EDA+R + ++    +  D 
Sbjct: 601 CRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDY 660

Query: 478 ISYSKLVEGL 487
           +++  LV+G 
Sbjct: 661 LTHKALVKGF 670


>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
 gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
          Length = 949

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 237/546 (43%), Gaps = 46/546 (8%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G    V V+  +  A  + +R   D   + + M+  G+  + +    L+ V     
Sbjct: 143 MLRSGLTPPVRVYRSLAFAYCKARRSL-DASDMCQLMLIKGMYLDRELSTALIRVFCREG 201

Query: 217 RIESALDQFRRMH-KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           R+E ALD FRRM   +    ++  +  +I GL  + RVD  + +  EM D GIQ + + Y
Sbjct: 202 RLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATY 261

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C+   +  A+ ++K+M    + PD   Y  L+  LC++ +L +A ++ + M+ 
Sbjct: 262 NVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLE 321

Query: 336 IGLTPTDDVFVDIVRGLCE------VGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
            GL P   +F+ I R   +      V K  ++V  L+  CG      ++L   C N    
Sbjct: 322 SGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLD--CGAKLLELSSLAGGCSNMSLQ 379

Query: 390 FLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A  +L+++    +   +   N+ I  +C    +  +Y LLG++V     P   TY+  
Sbjct: 380 KEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIV 439

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +  KC                                 LC+  ++ +A  +   M   G 
Sbjct: 440 I--KC---------------------------------LCEQNRMDDARALITIMQSRGV 464

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
               S+ +I++   C + +++ A+ L       G   + + Y  I++ L +++R K+   
Sbjct: 465 RPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEA 524

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            L QM+ EG A D   Y  LI   S   + ++    F+ M+K GL P      SL++GL 
Sbjct: 525 TLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLV 584

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
            G+++      + +++ +     + +Y +LIN  +++G       L+ LM+     PD  
Sbjct: 585 KGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLI 644

Query: 689 THGLLV 694
           T+G LV
Sbjct: 645 TYGALV 650



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 225/515 (43%), Gaps = 36/515 (6%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E+V + ++P    LN ++  +    R++ +     ++   GC P+  T+ IVIK L   +
Sbjct: 388 EIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQN 447

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R+DD+ +++  M   G++ ++S  + ++   C+  ++E A+ LF  M    + P    Y+
Sbjct: 448 RMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYD 507

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG---------LCEVGKFDESV 362
            +I CLC   RL +A   L  MI  GL P + ++  ++ G         +C +  FDE +
Sbjct: 508 SIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRI--FDEML 565

Query: 363 NFLEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIADCDS-WNIPIRWLCE 419
                K G    PH   +L+       K   A   LE+M +  IA     + + I     
Sbjct: 566 -----KRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFR 620

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL------ 473
             ++R   +L+  M+ ++V PD  TY A V G C+      A R  R   A+ L      
Sbjct: 621 KGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICR----NIARRGMRPSLAKKLKEARYM 676

Query: 474 -------VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
                  ++D+ +  +    +C  E I  A  +   + +NG       +N +I GLC   
Sbjct: 677 LFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRAN 736

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K+D A  L S+   +G      TYT +M   ++L      + +   +  +GC  D   Y 
Sbjct: 737 KMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYN 796

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
             I+ +S   ++K+   F  +M K G VP + +   L+  L   + + +V      ++  
Sbjct: 797 TFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQ 856

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
                 + Y  L+  L K+G  S+A  +  +ML K
Sbjct: 857 GYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKK 891



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/493 (20%), Positives = 208/493 (42%), Gaps = 52/493 (10%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           V N+++ A+  E R    + ++  ++V  G  P+V T N +++ L E NR++ A      
Sbjct: 400 VLNLMIIAMCSEGRLDVSY-YLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITI 458

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +G  P+  T  I++        ++ ++ + GEM   GI+  ++ Y  II  LCR  +
Sbjct: 459 MQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRR 518

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EA    + M    L PDE+ Y  LIN      +  +   I ++M+  GL P    +  
Sbjct: 519 LKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGS 578

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP-------------------------------- 375
           ++ GL +  K  +++ +LE       +P                                
Sbjct: 579 LINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTN 638

Query: 376 -------HNALLECCCN-----------AGKFFLAKCILEKMADRKIADCDSWNIPIRWL 417
                  + AL+   C            A K   A+ +L +M   +I D  +       +
Sbjct: 639 VAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLP-QIIDTRNGKQKDNQI 697

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C  E I+ A  ++  +  + +VPD   Y+  + G C+    +DA  +   +    ++ + 
Sbjct: 698 CTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNH 757

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L+    ++  I  A+++F  ++ +GC     ++N  I GL +  ++ +A+    +
Sbjct: 758 VTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLM 817

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
            +  G   + ++Y K+M  L+       +L +   ML +G       Y  L+  +++  +
Sbjct: 818 MHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGR 877

Query: 598 LKDCALFFNVMVK 610
             +    F +M+K
Sbjct: 878 WSEADRIFTMMLK 890



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 122/598 (20%), Positives = 224/598 (37%), Gaps = 119/598 (19%)

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           LFE  R++  L  +  M  +G  P++ T+ ++I+    +  V  ++ I   M   G+  +
Sbjct: 233 LFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPD 292

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL-------------- 317
           L  YT ++  LC++ KL EA  LF  M    L PD + +  +                  
Sbjct: 293 LRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALK 352

Query: 318 --------------------CENLRLD-DANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
                               C N+ L  +A+ +L++++   + P + V   ++  +C  G
Sbjct: 353 AVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEG 412

Query: 357 KFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
           + D S   L     Y   P    +N +++C C   +   A+ ++  M  R +  D  + +
Sbjct: 413 RLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNS 472

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           I +   C+  EI  A  L G M    + P  A Y + ++  C++   ++A    RQ+  +
Sbjct: 473 IMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIRE 532

Query: 472 SLVLDSI-----------------------------------SYSKLVEGLCQVEKITEA 496
            L  D I                                   +Y  L+ GL +  KI +A
Sbjct: 533 GLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKA 592

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           +     M + G +  +  + +LI        V   + L  L   +  +    TY  ++ G
Sbjct: 593 LGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTG 652

Query: 557 LV--------------KLQRAKDLL-------------------------VVLAQMLVE- 576
           +               KL+ A+ +L                         + +AQ +++ 
Sbjct: 653 ICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQD 712

Query: 577 ----GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
               G   D+  Y  +I  +   NK+ D     +VM + G++P+  T   L++       
Sbjct: 713 LEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGD 772

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           ++      N L SD  V D   YN  I GL   G   +A   L +M  +G+VP   ++
Sbjct: 773 INHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASY 830



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/522 (20%), Positives = 209/522 (40%), Gaps = 41/522 (7%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I SAL  F R+ + G  P+  +   +++ + + S   +++ +L         L +S +  
Sbjct: 63  ISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDVLVLSMGNPSPLPVSDFAL 122

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +IP LC E  +++A  LF  M    L P    Y  L    C+  R  DA+D+ + M++ G
Sbjct: 123 LIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLMLIKG 182

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG--YV---TSPHNALLECCCNAGKFFLA 392
           +    ++   ++R  C  G+ + +++      G  +V      +  ++      G+    
Sbjct: 183 MYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHG 242

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +  +M DR I  D  ++N+ IRW C+++ +  A ++   M+ + V PD   Y+  +  
Sbjct: 243 LQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMAS 302

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ------VEKITEAVEVFCCMSK 505
            CK     +A  +F ++    L  D + +  +     +      V K  +AV    C +K
Sbjct: 303 LCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAK 362

Query: 506 --------NGCSLSSSS---------------------FNILIYGLCVMRKVDKAIRLRS 536
                    GCS  S                        N++I  +C   ++D +  L  
Sbjct: 363 LLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLG 422

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
              + G   +  TY  ++  L +  R  D   ++  M   G   D+    I++ +  +  
Sbjct: 423 KLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIG 482

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +++     F  M K G+ P      S++  L    +L    + + +++ +    D  +Y 
Sbjct: 483 EIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYT 542

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            LING      T     + D ML +G  P    +G L+   V
Sbjct: 543 SLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLV 584



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 114/285 (40%), Gaps = 6/285 (2%)

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD A   A V    +L +   AL  F ++          S + L+  +C     TEA++V
Sbjct: 45  PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
                 N   L  S F +LI GLC    VDKA  L      SG +     Y  +     K
Sbjct: 105 LVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCK 164

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP-DRE 618
            +R+ D   +   ML++G  LD E    LI+    + +L+     F  M     V  D  
Sbjct: 165 ARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAY 224

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
              +++ GL +  ++       ++++      D++ YN++I    K      A  +  +M
Sbjct: 225 AYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVM 284

Query: 679 LGKGWVPDATTHGLLVGS-----SVGEEIDSRRFAFDSSSFPDSV 718
           +  G  PD   + +L+ S      +GE  +      +S  FPD V
Sbjct: 285 IRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHV 329


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 211/481 (43%), Gaps = 43/481 (8%)

Query: 219 ESALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDLG----IQLELS 273
           + ALD F RM  +  C  + ++F  V+  +I     D ++     + D      IQ    
Sbjct: 117 QKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGL 176

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  +I  LCR   +++A+ +F+ M   + + D  TY  L++ LC   R+D+A  +L++M
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 236

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
            V G  P    F  ++  LC+ G    +   +++                      FL  
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDN---------------------MFLKG 275

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           C+  ++         ++N  +  LC   ++ KA  LL RMV +  VP+  T+   V G  
Sbjct: 276 CVPNEV---------TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFV 326

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K     D +RV   +  +    +  SYS L+ GL +  K    ++++  M + GC  ++ 
Sbjct: 327 KHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTI 386

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
            ++ LI GLC   K D+A        + G +  + TY+ +M G  +       ++V  +M
Sbjct: 387 VYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEM 446

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
               C      Y ILI  + +  KLK+  + +  M+  G+  D     S++HG  +    
Sbjct: 447 TDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNA--- 503

Query: 634 HLVSSGI---NKLVSDSEVL--DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
            LV  G+   N+++  +  L  D   YNIL+N    +   S+A  +L+ ML +G  PD  
Sbjct: 504 QLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFI 563

Query: 689 T 689
           T
Sbjct: 564 T 564



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 41/379 (10%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+    N  R++ A+ +L  M   G   +   FNV++ A+ + K   +    +   M  
Sbjct: 215 TLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCK-KGDLSRASKLVDNMFL 273

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G VPN  T N L+  L    +++ A+    RM    C PN  TF  ++ G + + R  D
Sbjct: 274 KGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALD 333

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            V +L  + + G +     Y+ +I  L +E K E  ++L+K M      P+ + Y  LI+
Sbjct: 334 GVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALID 393

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC   + D+A + L +M   G TP    +  ++ G  E G                   
Sbjct: 394 GLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI----------------- 436

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDS----WNIPIRWLCENEEIRKAYELLG 431
           H A+L              + ++M D    DC+     ++I I  LC+N ++++A  +  
Sbjct: 437 HKAIL--------------VWKEMTDN---DCNHHEVCYSILINGLCKNGKLKEALIVWK 479

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS--LVLDSISYSKLVEGLCQ 489
           +M+   +  D   YS+ + G C     E  +++F Q+   +  L  D ++Y+ L+   C 
Sbjct: 480 QMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCT 539

Query: 490 VEKITEAVEVFCCMSKNGC 508
              ++ A+++   M   GC
Sbjct: 540 KNSVSRAIDILNTMLDQGC 558



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/378 (20%), Positives = 151/378 (39%), Gaps = 32/378 (8%)

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C +L L+  N +++      + P    F  +++ LC VG  D++V               
Sbjct: 151 CFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVE-------------- 196

Query: 378 ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
                            +   M+DR  +AD  +++  +  LC    I +A  LL  M V 
Sbjct: 197 -----------------VFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVE 239

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
              P+   ++  +   CK  +   A ++   +  +  V + ++Y+ LV GLC   K+ +A
Sbjct: 240 GTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKA 299

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           + +   M  N C  +  +F  L+ G     +    +R+       G      +Y+ ++ G
Sbjct: 300 MSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISG 359

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K  + +  + +  +M+ +GC  +   Y  LI  +  + K  +   +   M   G  P+
Sbjct: 360 LFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPN 419

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  SL+ G  +   +H       ++  +        Y+ILINGL K G   +A  +  
Sbjct: 420 SFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWK 479

Query: 677 LMLGKGWVPDATTHGLLV 694
            ML +G   D   +  ++
Sbjct: 480 QMLSRGIKLDVVAYSSMI 497



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/391 (20%), Positives = 153/391 (39%), Gaps = 95/391 (24%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L    DLS A K+   + ++    +   TY  ++  L L G +++   L   MV  
Sbjct: 251 LISALCKKGDLSRASKLVDNMFLKGCVPNEV-TYNSLVHGLCLKGKLDKAMSLLNRMVAN 309

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           +         +LV  FV H R    +RVLV++   G++ +   ++ ++  + +E +G   
Sbjct: 310 KCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG-EH 368

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE---- 241
            + ++KEMV+ G  PN    + L++ L    + + A +    M  KG  PNS T+     
Sbjct: 369 GMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMW 428

Query: 242 -------------------------------IVIKGLIANSRVDDSVSILGEMFDLGIQL 270
                                          I+I GL  N ++ +++ +  +M   GI+L
Sbjct: 429 GYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKL 488

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMM----------------------------RALD 302
           ++  Y+ +I   C    +E+ ++LF  M                            RA+D
Sbjct: 489 DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAID 548

Query: 303 LM---------PDELT---------------------YEELINCLCENLRLDDANDILED 332
           ++         PD +T                      +EL+  L +  R   A++I+E 
Sbjct: 549 ILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEV 608

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           M+   L P    +   V+ LC+  K  ++++
Sbjct: 609 MLQKFLLPKPSTWALAVQQLCKPMKVRKTIS 639



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 46/225 (20%)

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           SFN++I  LC +  VD+A+ +              TY+ +M GL    R  + + +L +M
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 236

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
            VEG   +  A+ +LI ++ ++  L   +   + M   G VP+  T              
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVT-------------- 282

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                                YN L++GL  +G   +A  LL+ M+    VP+  T G L
Sbjct: 283 ---------------------YNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTL 321

Query: 694 VGSSV--GEEIDSRR---------FAFDSSSFPDSVSDILAEGLG 727
           V   V  G  +D  R         +  +  S+   +S +  EG G
Sbjct: 322 VDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 366


>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 753

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 140/649 (21%), Positives = 285/649 (43%), Gaps = 23/649 (3%)

Query: 50  YEAKIQSLRHNLSP--DH--LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK 105
           +  ++Q+   NL P  DH  +  VL    +   AL+ F+WV     F++  DT+ K+I  
Sbjct: 92  WTTRLQNSIRNLVPHFDHSLVYNVLHAARNSEHALQFFRWVERAGLFKNDRDTHMKIIEI 151

Query: 106 LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
           LG A  +     +  +M K+         + L+ S+     V  A+++   MN  G + S
Sbjct: 152 LGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKAGIVQEAVKIFNKMNELGVERS 211

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           +  ++ +   I+   R +     V+ +M+  GI P   T N +L   F + R+E+A+  +
Sbjct: 212 IKSYDALFKVILRRGR-YMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFLSLRLETAMRFY 270

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             M  +G  P+  T+  +I G     +++++  +  EM    I   +  YT +I      
Sbjct: 271 DDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAV 330

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD-V 344
           +++++ +RL + M++ ++ P+  TY  L+  LC+  ++ +A DIL +M+   L P D+ +
Sbjct: 331 DRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDNSI 390

Query: 345 FVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
           F+ ++   C+ G    + + L              +  L+E  C A ++  A   L+K+ 
Sbjct: 391 FLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYLDKLI 450

Query: 401 DRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           +++I          + +++N  I++LC + +  KA E+  R ++   V D   ++  + G
Sbjct: 451 EKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKA-EIFFRQLMKKGVQDPLAFNNLICG 509

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             K    + A  +F+ +  + +  D+ +Y  ++E   +  +  +A      M ++G    
Sbjct: 510 HAKEGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPD 569

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
            S F  ++  L    +V  A R+       G         KI+  L+     ++ L  + 
Sbjct: 570 PSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIE 629

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            ++  G  ++ +    L+  +SE+ K        +  ++     D ++   +L  L    
Sbjct: 630 LLMQSGFHVNFDD---LLSVLSEKGKTIAALKLLDFALERDFNLDFKSYDKVLDALLAAG 686

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           +     S + K++    V D S    LI  L +EG T QA  L  ++ G
Sbjct: 687 KTLNAYSILCKIMQKGGVSDWSSSKDLIKSLNQEGNTKQADILSRMIKG 735


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/524 (21%), Positives = 250/524 (47%), Gaps = 15/524 (2%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLG--AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           VL  M S GF+     +N ++   +I+ + +  A    +++EM + G++P++ T N  + 
Sbjct: 284 VLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAG---MFREMTRRGLMPDIFTCNSYMS 340

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
            L +  + + A + F  M  KG  P+  T+ +++ G  A   V D +++   M   GI  
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVA 400

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           + S Y  +I    +   ++EA+ +F  M+   +MPD  TY  +I       RL DA D  
Sbjct: 401 DHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKF 460

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY-VTSPH----NALLECCCN 385
             MI +GL P   V+  +++G C  G   ++   + +     +  P+    N+++   C 
Sbjct: 461 NQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCK 520

Query: 386 AGKFFLAKCILE---KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
            G+   A+ I +    + +R   D  ++N  I       ++ KA+ +L  M+   + PD 
Sbjct: 521 EGRVVEAQDIFDLVIHIGER--PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDV 578

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TYSA + G C+    +D L +FR++ ++ +   +I+Y  ++ GL    +   A ++   
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M ++G ++  S+  I++ GLC     D+AI L     +    +  +    ++  + K+++
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
            ++   +   +   G   +   Y ++I ++ ++  +++    F++M K+G  P    + +
Sbjct: 699 REEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNN 758

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           ++  L +  ++    + ++K+   +  L++S  +++++   ++G
Sbjct: 759 IIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKG 802



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 127/546 (23%), Positives = 221/546 (40%), Gaps = 47/546 (8%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G K  V V N++L  +   KR       +   M + G+ P+  + + +L+ L E +R + 
Sbjct: 149 GLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQR 208

Query: 221 ALDQFRRMHKK--GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           ALD    M KK  GC PN  ++  VI G      V  + ++  EM   G+  ++  Y+  
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSY 268

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+   +++A  + + M +    PD++TY  +I+      +  +   +  +M   GL
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328

Query: 339 TPTDDVFV--DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
            P  D+F     +  LC+ GK  E+  F +        P    ++ LL      G     
Sbjct: 329 MP--DIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDM 386

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
             +   M    I AD   +NI I    +   + +A  +  +M    V+PD  TY   +  
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAA 446

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
             ++    DA+  F Q+ A  L  D+I Y+ L++G C    + +A E+   M   G    
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRP 506

Query: 512 SSSF-NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           ++ F N +I  LC   +V +A  +  L    G      T+  ++ G   + + +    VL
Sbjct: 507 NTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVL 566

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             M+  G   DV  Y  L+       ++ D  + F  M+  G+ P   T           
Sbjct: 567 DAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTIT----------- 615

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
                                   Y I+++GL+ +G T  A  +   M+  G   D +T 
Sbjct: 616 ------------------------YGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTC 651

Query: 691 GLLVGS 696
           G+++G 
Sbjct: 652 GIILGG 657



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 120/558 (21%), Positives = 244/558 (43%), Gaps = 10/558 (1%)

Query: 146 RVNGAMRVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK--AGIVPNV 202
           R + A+ VL++ M   G +     ++ VL ++ E+ R       ++  MVK   G  PNV
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHT-MVKKSGGCSPNV 227

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            + N ++   F    +  A + F  M ++G  P+  T+   I  L     +D +  +L +
Sbjct: 228 VSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQ 287

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M   G + +   Y C+I       + +E   +F+ M    LMPD  T    ++ LC++ +
Sbjct: 288 MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGK 347

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVT--SPHNA 378
             +A +  + M   G  P    +  ++ G    G   + +N     +  G V   S +N 
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L++     G    A  I  +M +R +  D  ++   I        +  A +   +M+   
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL-DSISYSKLVEGLCQVEKITEA 496
           + PD   Y++ + G C   N   A  +  ++ ++ +   +++ ++ ++  LC+  ++ EA
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            ++F  +   G      +FN LI G  ++ K++KA  +     S G      TY+ ++ G
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
             +  R  D L++  +ML +G       Y I++  +    +        + M+++G   D
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T   +L GL   +      +   KL + +   + ++ N +I+ ++K     +A+ L D
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFD 707

Query: 677 LMLGKGWVPDATTHGLLV 694
            +   G VP+A+T+G+++
Sbjct: 708 SISATGLVPNASTYGVMI 725



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 215/517 (41%), Gaps = 24/517 (4%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRI-ESALDQF----RRMHKKGCCPNSRTFEIVIKG 246
           E V+AG +   DT +   E+L +T  + E AL+ F     R      C +  +  + +  
Sbjct: 44  ERVRAGTLSTEDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSLAVALFN 103

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
            I        V++            +  Y  ++   CR ++      LF       L  D
Sbjct: 104 RICREEARPRVALP----------TVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTD 153

Query: 307 ELTYEELINCLCENLRLDDA-NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
            +    L+ CLC   R DDA N +L  M  +G+ P    +  +++ LCE  +   +++ L
Sbjct: 154 VIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLL 213

Query: 366 E------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
                    C      +N ++      G+   A  +  +M  +  + D  +++  I  LC
Sbjct: 214 HTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALC 273

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +   + KA  +L +M+ +   PD  TY+  + G   L  +++   +FR+++ + L+ D  
Sbjct: 274 KARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIF 333

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           + +  +  LC+  K  EA E F  M+  G      ++++L++G      V   + L +  
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +G     S Y  ++    K     + +++  QM   G   D   Y  +I + S   +L
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRL 453

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS-EVLDSSMYNI 657
            D    FN M+  GL PD     SL+ G      L      I++++S      ++  +N 
Sbjct: 454 ADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNS 513

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +IN L KEG   +A  + DL++  G  PD  T   L+
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI 550



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 4/325 (1%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRM 433
           +N L++CCC A +  +   +  +     +  D    NI ++ LC  +    A   LL RM
Sbjct: 122 YNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRM 181

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS--LVLDSISYSKLVEGLCQVE 491
               V PD  +YS  +   C+    + AL +   +  +S     + +SY+ ++ G  +  
Sbjct: 182 PELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREG 241

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++++A  +F  M + G      +++  I  LC  R +DKA  +     S+G      TY 
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYN 301

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G   L + K+   +  +M   G   D+      + S+ +  K K+ A FF+ M   
Sbjct: 302 CMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK 361

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G  PD  T   LLHG A    +  + +  N +  +  V D S+YNILI+   K G+  +A
Sbjct: 362 GHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEA 421

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGS 696
             +   M  +G +PDA T+G ++ +
Sbjct: 422 MLIFTQMQERGVMPDAWTYGTVIAA 446



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 163 KLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           K ++ + N ++ A+ +  KR  A+ +F    +   G+VPN  T   ++  L +   +E A
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEANELF--DSISATGLVPNASTYGVMITNLLKEGSVEEA 737

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            + F  M K GC P+SR    +I+ L+    +  + + L ++    I LE S  + ++ +
Sbjct: 738 DNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSL 797

Query: 282 LCRENKLEEAIRLFKMM 298
             R+ K  E I+    M
Sbjct: 798 FSRKGKYREQIKSLPAM 814


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 145/633 (22%), Positives = 279/633 (44%), Gaps = 30/633 (4%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL----GLAGNVEEMEG 117
           + + +I  L + +  + AL+ F+  + + R  HT  + C  +L+L    G  G++ E+  
Sbjct: 91  AAEDVIHALRSADGPAEALERFRSAARKPRVAHTTAS-CNYMLELMRGHGRVGDMAEVFD 149

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVL 173
           + Q         + +A +    +      V G +R     L  M   G  L+   +N ++
Sbjct: 150 VMQR-------QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV 202

Query: 174 GAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
             +V  K GF  + + VY+ M+  G+VP+V T + L+    +   +E+ L   R M   G
Sbjct: 203 YFLV--KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 260

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             PN  ++ I I+ L    R D++  IL +M + G + ++  +T +I +LC   ++ +A 
Sbjct: 261 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 320

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            +F  M+  D  PD +TY  L++   +N       +I   M   G       +  ++  L
Sbjct: 321 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 380

Query: 353 CEVGKFDESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           C+VG+  E++   ++  + G V     +N+L+     A +F  A  + + M D      +
Sbjct: 381 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM-DIHGPKPN 439

Query: 409 SWN--IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
            +   + I +  ++ E  KA +    M    +VPD    +A + G  K      A RVF 
Sbjct: 440 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 499

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++ A  +  D+I+Y+ +++   +  K  EAV++F  M +N C     + N LI  L    
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 559

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           + D+A R+           T  TY  ++ GL +  + K+++ +L +M       ++  Y 
Sbjct: 560 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 619

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK---- 642
            ++  + +   + D       M   G +PD  +  ++++GL    + +   S   +    
Sbjct: 620 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 679

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           L+ D   L + + + +  GL KE L     Y L
Sbjct: 680 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 712



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 147/705 (20%), Positives = 281/705 (39%), Gaps = 114/705 (16%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI+VL +   +S A  +F W   +   +    TY  ++ K G  G+ + +  +   M  +
Sbjct: 306 LIQVLCDAGRISDAKDVF-WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 364

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            Y +   A  +++ +     RV  A+ +   M   G       +N ++   ++  R F D
Sbjct: 365 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR-FGD 423

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + ++K M   G  PN  T    +    ++     A+ ++  M  KG  P+      V+ 
Sbjct: 424 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 483

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           GL  + R+  +  +  E+  +G+  +   YT +I    + +K +EA+++F  M   + +P
Sbjct: 484 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 543

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D L    LI+ L +  R D+A  I   +  + L PTD  +  ++ GL   GK  E ++ L
Sbjct: 544 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 603

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN 420
           E+       P    +N +L+C C  G    A  +L  M  +  I D  S+N  I  L + 
Sbjct: 604 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 663

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ------------- 467
           E   +A+ +  +M    ++PD AT    +    K+   ++AL + +              
Sbjct: 664 ERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSS 722

Query: 468 -----------------------VSAQSLVLDSISYSKLVEGLCQVEKITEAVEV----- 499
                                  +++  + LD      L++ LC+ +K  EA E+     
Sbjct: 723 CHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFK 782

Query: 500 ------------------------------FCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                                         F  M + GC     ++N+L+  +    +++
Sbjct: 783 SFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIE 842

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
           + ++++   +  G   T  TY  I+ GLVK +R +              A+D        
Sbjct: 843 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ-------------AID-------- 881

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
                        L++N+M + G  P   T   LL GL    ++    +  N+++     
Sbjct: 882 -------------LYYNLMSQ-GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCK 927

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            + ++YNIL+NG    G T +  +L   M+ +G  PD  ++ +++
Sbjct: 928 ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 115/555 (20%), Positives = 231/555 (41%), Gaps = 42/555 (7%)

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           K  +     + NY+LE++    R+    + F  M ++    N  TF  +  GL     + 
Sbjct: 118 KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 177

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            +   L  M + GI L    Y  ++  L +     EA+ ++++M    ++P   TY  L+
Sbjct: 178 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 237

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCG 370
               +   ++    +L +M   G+ P    +   +R L +  +FDE+   L     + C 
Sbjct: 238 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 297

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                H  L++  C+AG+   AK +  KM  +D+K  D  ++   +    +N + +   E
Sbjct: 298 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQK-PDRVTYITLLDKFGDNGDSQSVME 356

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   M       +   Y+A +   C++    +AL +F ++  + +V +  SY+ L+ G  
Sbjct: 357 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 416

Query: 489 QVEKITEAVEVFCCM-------------------SKNGCSLSS----------------S 513
           + ++  +A+E+F  M                    K+G S+ +                 
Sbjct: 417 KADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 476

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           + N +++GL    ++  A R+     + G S  T TYT ++    K  +  + + +   M
Sbjct: 477 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 536

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           +   C  DV A   LI ++ +  +  +    F  + +  L P   T  +LL GL    ++
Sbjct: 537 IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 596

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
             V   + ++   +   +   YN +++ L K G  + A  +L  M  KG +PD +++  +
Sbjct: 597 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 656

Query: 694 VGSSVGEEIDSRRFA 708
           +   V EE  +  F+
Sbjct: 657 IYGLVKEERYNEAFS 671


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 163/731 (22%), Positives = 324/731 (44%), Gaps = 49/731 (6%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFK-----W---- 85
           +S  T++I++   +D   KI  + +N     L++    T DL+ A  +F      W    
Sbjct: 248 MSQATELIENSWRSD--VKIDIVTYNT----LLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 86  ------VSIQ---KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALI 135
                 V  Q   K  Q T  TY  +I        VEE   L + M+     P+V     
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTC-S 360

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S+++ F  H ++  A  +   M   G   +   +  ++ ++ +  R    F  +  +MV 
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFN-LQSQMVV 419

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            GI  ++ T   +++ LF+  + + A + F  + K    PN  T+  ++ G     +++ 
Sbjct: 420 RGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMEL 479

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L +M    +   +  ++ II    ++  L +A+ + + M   ++MP+ + Y  LI+
Sbjct: 480 AELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILID 539

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
              +    D A+D  ++M    L  ++ +F  ++  L  VG+ DE+ + + D       P
Sbjct: 540 GYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDP 599

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
               + +L++     G    A  I+++M ++ I  D  ++N  I+ L    +    Y + 
Sbjct: 600 DIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VC 658

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ- 489
            RM+   + PDC TY+  +   C     EDAL +  ++ +  ++ ++++Y+ L+ GLC+ 
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718

Query: 490 --VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
             VEK   A++    M      ++      L+       K DK +++     +SG   + 
Sbjct: 719 GAVEKAESALDEMLVMEFVPTPITHK---FLVKAYSRSEKADKILQIHEKLVASGLELSL 775

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
           + Y  ++    +L   +   VVL +M+  G + D+  Y  LI+     + ++     ++ 
Sbjct: 776 TVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQ 835

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE----VLDSSMYNILINGLW 663
           M   G+ P+  T  +LL GL++   +  +     KLVS+      V +++ Y+IL++G  
Sbjct: 836 MFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYG 895

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFD---SSSFPDSV 718
           + G   +   L   M+ KG+VP   T+ +L+   +  G+ I++R    D       P+S 
Sbjct: 896 RVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSF 955

Query: 719 S-DILAEGLGN 728
           + DIL  G  N
Sbjct: 956 TYDILTCGWLN 966



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 211/485 (43%), Gaps = 30/485 (6%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L+ +    +R  +A   F  M   G  P    +  ++    A+  V     +  +M   G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           +  ++     ++  LC+   L+ A+   +    +D+  D +TY  +I   C+   +D   
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQGF 182

Query: 328 DILEDMIVIGLTPTDDVFVDI-VRGLCEVG--KFDESV--NFLEDKCGYVTSPHNALLEC 382
            +L +M+  GL   D +  +I V+G C +G  ++ E V  N ++          N L++ 
Sbjct: 183 GLLSEMVKRGLC-FDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 383 CCNAGKFFLAKCILEK--MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV------ 434
            C AG    A  ++E    +D KI D  ++N  ++  C+  ++ +A  L   ++      
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKI-DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDE 300

Query: 435 -------------VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
                        + ++ P   TY+  +   CK    E++  +++++    ++ D ++ S
Sbjct: 301 DRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS 360

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++ G C+  K+TEA  +F  M + G   +  S+  +I  L    +V +A  L+S     
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S+   T T +M GL K+ + K+   V   +L    A +   Y  L+    +  K++  
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA 480

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
            L    M K  + P+  T  S+++G A    L      + ++V  + + ++ +Y ILI+G
Sbjct: 481 ELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540

Query: 662 LWKEG 666
            +K G
Sbjct: 541 YFKAG 545



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 169/384 (44%), Gaps = 10/384 (2%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   GI P++     L++  F+     +AL   + M +K    +   +  +IKGL+   
Sbjct: 591 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG 650

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           + D    +   M +LG+  +   Y  II   C + K E+A+ +   M++  +MP+ +TY 
Sbjct: 651 KYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG- 370
            LI  LC+   ++ A   L++M+V+   PT      +V+      K D+ +   E     
Sbjct: 710 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 769

Query: 371 ---YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
                 + +N L+   C  G    AK +L++M  R I AD  ++N  IR  C    + KA
Sbjct: 770 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 829

Query: 427 YELLGRMVVSSVVPDCATYSAFVLG----KCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
            +   +M V  + P+  TY+  + G           E+  ++  +++ + LV ++ +Y  
Sbjct: 830 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 889

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           LV G  +V    + + +   M   G   +  ++N+LI       K+ +A  L +   + G
Sbjct: 890 LVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKG 949

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDL 566
               + TY  +  G + L    ++
Sbjct: 950 RIPNSFTYDILTCGWLNLSYEPEI 973



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 142/687 (20%), Positives = 258/687 (37%), Gaps = 131/687 (19%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMV 194
           +L+  ++ H R + A     +M + G   ++  +N +L        G    V  +Y +M+
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQF--NASGLVSQVKLMYSDML 121

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFR---------------------------- 226
             G+VP+V ++N L+  L +   ++ AL   R                            
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQG 181

Query: 227 -----RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
                 M K+G C +S T  I++KG      V  +  ++  + D G+  ++     +I  
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA--------------- 326
            C    + +A  L +     D+  D +TY  L+   C+   L  A               
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 327 ----NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NA 378
               ND++    +  L PT   +  ++   C+    +ES +  +        P     ++
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           +L   C  GK   A  +  +M +  +  +  S+   I  L ++  + +A+ L  +MVV  
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 421

Query: 438 V-----------------------------------VPDCATYSAFVLGKCKLCNYEDAL 462
           +                                    P+C TYSA + G CKL   E A 
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG- 521
            V +++  + +  + I++S ++ G  +   +++AV+V   M +     ++  + ILI G 
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 541

Query: 522 -------------------------------LCVMRKVDKAIRLRSL---AYSSGTSYTT 547
                                          L  +++V +    RSL    YS G     
Sbjct: 542 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDI 601

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             Y  ++ G  K       L ++ +M  +    DV AY  LI+ +    K  D     + 
Sbjct: 602 VNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSR 660

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M++ GL PD  T  ++++      +       +N++ S   + ++  YNILI GL K G 
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
             +A   LD ML   +VP   TH  LV
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLV 747



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 194/485 (40%), Gaps = 61/485 (12%)

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            L +SF+  +I +    ++   A   F  MRAL L+P    +  L+     +  +     
Sbjct: 56  HLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKL 115

Query: 329 ILEDMIVIGLTPTDDVF-VDI-VRGLCEVGKFDESVNFLE-------DKCGYVTSPH--- 376
           +  DM+  G+ P  DVF V++ V  LC+VG  D ++ +L        D   Y T      
Sbjct: 116 MYSDMLFCGVVP--DVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFC 173

Query: 377 ---------------------------NALLECCCNAGKFFLAKCILEKMADRKIA-DCD 408
                                      N L++  C  G    A+ ++  + D  +  D  
Sbjct: 174 QKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVI 233

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY---------- 458
             N  I   CE   + +A EL+     S V  D  TY+  +   CK  +           
Sbjct: 234 GLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEI 293

Query: 459 ------EDALR---VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
                 ED L+   V  Q   ++L    ++Y+ L+   C+   + E+  ++  M  NG  
Sbjct: 294 LGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIM 353

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
               + + ++YG C   K+ +A  L    Y  G      +Y  I+  L K  R  +   +
Sbjct: 354 PDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNL 413

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
            +QM+V G + D+     ++  + +  K K+    F  ++K  L P+  T  +LL G   
Sbjct: 414 QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 473

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             ++ L    + K+  +    +   ++ +ING  K+G+ S+A  +L  M+ +  +P+   
Sbjct: 474 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 533

Query: 690 HGLLV 694
           + +L+
Sbjct: 534 YAILI 538


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/525 (22%), Positives = 222/525 (42%), Gaps = 36/525 (6%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           F  ++ +  + +   ++E  GF D      +M K G+ P+V T N L +       +  A
Sbjct: 307 FSYNILLHGLCVAGSMDEALGFTD------DMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
               ++M  +G  P+  T+  +I G      +++++ +  E    G +L + FY  ++  
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC+  ++EEA+ LF  M  L L PD + Y  LI+ LC+   +  A  + E M +    P 
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
                 ++ GL + G   E+ N+ +      T     L+E                    
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFD------TWTRMDLME-------------------- 514

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
               D   +NI I      + I +A +L  +M+   + P   T++  + G C+  +  +A
Sbjct: 515 ----DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
            ++   +  + LV   ++Y+ L+   C+V  + E       M  N    +  ++ +LI G
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKG 630

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           LC   K+ ++++L    Y+ G    + TY  I+    K +     L +   ML+  C   
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPT 690

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
              Y +LI ++     LKD       +    +   + T ++++       Q+       N
Sbjct: 691 QVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFN 750

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           ++++   V+    Y+ +IN L K GL ++A Y   +ML +G  PD
Sbjct: 751 QMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 123/538 (22%), Positives = 237/538 (44%), Gaps = 24/538 (4%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           L F++  H  ++ A+ V+  M    F+ SV  +N +L  +        D ++ VY E+  
Sbjct: 176 LAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRH-----TDIMWDVYNEIKV 230

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G   +  T + L+  L E +++E A+  F     K   P+  +   ++        +D 
Sbjct: 231 SGAPQSECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVGLIDV 289

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + S    M   G+  +   Y  ++  LC    ++EA+     M    + PD +TY  L  
Sbjct: 290 ARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAK 349

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVT 373
                  +  A  +++ M++ GL P    +  ++ G C++G  +E++   ++    G+  
Sbjct: 350 GFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKL 409

Query: 374 SP--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
           +   +N LL C C  G+   A  + ++M   ++  D   ++I I  LC+   +++AY+L 
Sbjct: 410 NVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLY 469

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M +    P      A +LG  K  N  +A   F   +   L+ D + Y+ +++G  ++
Sbjct: 470 EQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRL 529

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV------MRKVDKAIRLRSLAYSSGTS 544
           + I EA++++  M + G + S  +FN LI G C        RK+ + IRL+ L  S    
Sbjct: 530 DGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS---- 585

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TYT +M    ++   +++   L +M           Y +LI+ +  QNK+ +    
Sbjct: 586 --VVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQL 643

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
              M   GL+PD  T  +++     G ++       N ++  +       Y +LIN L
Sbjct: 644 LEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 223/518 (43%), Gaps = 59/518 (11%)

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSR---VDDSVSILGEMFDLGIQLELSFYTCI 278
           L++FR     G   +   F        A SR   + D++ ++ +M DL  Q  +  Y  +
Sbjct: 160 LEKFRNWDSNGLVWDMLAF--------AYSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM-IVIG 337
           +  +   + + +     K+  A      E T   LI+ LCE  +L+DA   L D   V+G
Sbjct: 212 LHNMRHTDIMWDVYNEIKVSGAPQ---SECTTSILIHGLCEQSKLEDAISFLHDSNKVVG 268

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNF--LEDKCGYV--TSPHNALLECCCNAGKFFLAK 393
             P+      I+   C+VG  D + +F  L  K G +  +  +N LL   C AG    A 
Sbjct: 269 --PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              + M    +  D  ++N   +       +  A +++ +M++  + PD  TY+  + G 
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C++ N E+AL++ ++  ++   L+ I Y+ L+  LC+V +I EA+ +F  M         
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 513 SSFNILIYGLCVMRKVDKAIRL-------RSLAY-----------------SSGTSYTTS 548
             ++ILI+GLC    V +A +L       R   +                 S   +Y   
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF-D 505

Query: 549 TYTKIML------------GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           T+T++ L            G V+L    + + +  +M+  G    V  +  LI     + 
Sbjct: 506 TWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRG 565

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            L +      V+   GLVP   T  +L++   +   +  +   ++++ +++ V     Y 
Sbjct: 566 DLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYT 625

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +LI GL ++    ++  LL+ M  KG +PD+ T+  ++
Sbjct: 626 VLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTII 663


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 251/566 (44%), Gaps = 47/566 (8%)

Query: 167 DVFN--VVLGAIVEE-KRGFADFVFVYKEMVKAGIV--PNVDTLNYLLEVLFETNRIESA 221
           DVF+  ++L ++ ++ K G AD +   + M + G V  P+V   + +++  F+   +  A
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLL--RMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKA 238

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            D F+ M ++G  P+  T+  V+  L     +D + + L +M + G+      Y  +I  
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
                + +EA+R+FK MR   ++PD +T   L+  LC+  ++ +A D+ + M + G  P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN 358

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  ++ G    G   +  +  +   G   +P     N L++   N G    A  I  
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M D  +  D  ++   I  LC   ++  A E   +M+   V PD   Y   + G C   
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           +   A  +  ++    + LD + +S ++  LC++ ++ +A  +F      G   ++  ++
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           +L+ G C++ K++KA+R+     S+G       Y  ++ G  K+ R  + L +  +ML +
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG------ 630
           G       Y I+I  + E  +     + F+ M ++G+  ++ T   +L GL         
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEA 658

Query: 631 ----SQLHLVSSGIN--------------KLVSDSEVLDSSM-----------YNILING 661
                +L  ++  IN              + V +++ L +S+           Y+I+I  
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDA 687
           L KEGL  +A  +   M   G  PD+
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDS 744



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/517 (22%), Positives = 229/517 (44%), Gaps = 16/517 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + ++++ G+  N+   N+LL+   E  R + ALD    R  + GC P+  ++ I++K L 
Sbjct: 134 FGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193

Query: 249 ANSRVDDSVSILGEMFDLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +   +  +L  M + G     ++  Y+ +I    +E  + +A  LFK M    + PD
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC+   +D A   L  M+  G+ P +  + +++ G    G++ E+V   +
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +   +   P     + L+   C  GK   A+ + + MA + +  +  S+ I +       
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKG 373

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    +L   M+   + PD  T++  +         + A+ +F ++    +  D ++Y 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +A+E F  M   G +    +++ LI G C    + KA  L S   ++
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       ++ I+  L KL R  D   +    +  G       Y +L+       K++  
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNI 657
              F+ MV AG+ P+     +L++G     +    L L    + K +  S +L    YNI
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL----YNI 609

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+GL++ G T  A      M   G   +  T+ +++
Sbjct: 610 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 220/477 (46%), Gaps = 25/477 (5%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGLAGNVEE 114
           L +N + ++LI    +T     A+++FK +   +R     D  T   ++  L   G ++E
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEM---RRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 115 MEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN----MNSGGFKLSVDVF 169
              +   M +K + PNV    I L     N Y   G +  + +    M   G    +  F
Sbjct: 343 ARDVFDTMAMKGQNPNVFSYTIML-----NGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 397

Query: 170 NVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           NV++ A      G  D  + ++ EM   G+ P+V T   ++  L    +++ A+++F +M
Sbjct: 398 NVLIKAYANC--GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             +G  P+   +  +I+G   +  +  +  ++ E+ + G+ L++ F++ II  LC+  ++
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A  +F +   + L P  + Y  L++  C   +++ A  + + M+  G+ P D V+  +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           V G C++G+ DE ++   +       P    +N +++    AG+   AK    +M +  I
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635

Query: 405 A--DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           A   C ++NI +R L +N    +A  L   +   +V  +  T +  + G  +    E+A 
Sbjct: 636 AMNKC-TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            +F  +S   LV   ++YS ++  L +   + EA ++F  M   GC   S   N ++
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/464 (21%), Positives = 199/464 (42%), Gaps = 35/464 (7%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR- 293
           P S T+ I++       R + +++  G++   G+++ +     ++   C   + +EA+  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIVRG 351
           L      L  +PD  +Y  L+  LC+  +   A+D+L  M   G   + DV  +  ++ G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSW 410
             + G  +++ +                               + ++M  R I  D  ++
Sbjct: 229 FFKEGDVNKACD-------------------------------LFKEMVQRGIPPDFVTY 257

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           +  +  LC+   + KA   L +MV   V+P+  TY+  + G      +++A+RVF+++  
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
            S++ D ++ S L+  LC+  KI EA +VF  M+  G + +  S+ I++ G      +  
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVD 377

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
              L  L    G +    T+  ++            +++  +M   G   DV  Y  +I 
Sbjct: 378 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
           ++    K+ D    FN M+  G+ PD+     L+ G      L      I++++++   L
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           D   ++ +IN L K G    A  + DL +  G  P A  + +L+
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 137/322 (42%), Gaps = 4/322 (1%)

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRMVVS 436
           L++CC  A +  LA     ++    +  +    N  ++  CE +   +A + LL R    
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPEL 176

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL--DSISYSKLVEGLCQVEKIT 494
             VPD  +YS  +   C       A  + R ++    V   D ++YS +++G  +   + 
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVN 236

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A ++F  M + G      +++ +++ LC  R +DKA        + G      TY  ++
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G     + K+ + V  +M       DV    +L+ S+ +  K+K+    F+ M   G  
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P+  +   +L+G A    L  ++   + ++ D    D   +N+LI      G+  +A  +
Sbjct: 357 PNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 416

Query: 675 LDLMLGKGWVPDATTHGLLVGS 696
            + M   G  PD  T+  ++ +
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAA 438



 Score = 42.7 bits (99), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 36/174 (20%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G  ++   +N+VL  + +  R F + +F++KE+    +  N+ TLN ++  +F+T 
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFKN-RCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTR 688

Query: 217 RIESALD-----------------------------------QFRRMHKKGCCPNSRTFE 241
           R+E A D                                    F  M   GC P+SR   
Sbjct: 689 RVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLN 748

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
            V++ L+  + +  + + L ++ +    LE      ++ +   +    E IR  
Sbjct: 749 HVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 129/566 (22%), Positives = 249/566 (43%), Gaps = 47/566 (8%)

Query: 167 DVF--NVVLGAIVEE-KRGFADFVFVYKEMVKAGIV--PNVDTLNYLLEVLFETNRIESA 221
           DVF  N++L ++  + K G AD +   + M + G V  P+V   N +++  F+   +  A
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLL--RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            D F+ M ++G  P+  T+  V+  L     +D + + L +M + G+  +   Y  +I  
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
                + +EA+R+FK MR   ++PD +    L+  LC+  ++ +A D+ + M + G  P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  ++ G    G   +  +  +   G   +P     N L++   N G    A  I  
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 420

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M D  +     ++   I  LC   ++  A E   +M+   VVPD   Y   + G C   
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           +   A  +  ++    + LD + +  ++  LC++ ++ +A  +F      G    +  +N
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           +L+ G C++ K++KA+R+     S+G       Y  ++ G  K+ R  + L +  +ML +
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL--------- 627
           G       Y I+I  + E  +     + F+ M ++G+  ++ T   +L GL         
Sbjct: 601 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660

Query: 628 -------------ADGSQLHLVSSGI--NKLVSDSEVLDSSM-----------YNILING 661
                         D   L+ + +G+   + V +++ L +S+           Y+I+I  
Sbjct: 661 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDA 687
           L KEGL  +A  +   M   G  PD+
Sbjct: 721 LIKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 194/435 (44%), Gaps = 10/435 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + YT  I M C  R ++ E A+  F  +    L  D +    L+   CE  R D+A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           DIL      +G  P    +  +++ LC  GK  ++ + L    + G V SP    +N ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G    A  + ++M  R I  D  +++  +  LC+   + KA   L +MV   V+
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G      +++A+RVF+++  QS++ D ++ + L+  LC+  KI EA +V
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G +    S+ I++ G      +     L  L    G +    T+  ++     
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                  +++  +M   G    V  Y  +I ++    K+ D    FN M+  G+VPD+  
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G      L      I++++++   LD   +  +IN L K G    A  + DL +
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 680 GKGWVPDATTHGLLV 694
             G  PDA  + +L+
Sbjct: 529 NVGLHPDAVVYNMLM 543



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 223/517 (43%), Gaps = 16/517 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + ++++ G+  +    ++LL+   E  R + ALD    R  + GC P+  ++ I++K L 
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 195

Query: 249 ANSRVDDSVSILGEMFDLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +   +  +L  M + G     ++  Y  +I    +E  + +A  LFK M    + PD
Sbjct: 196 NQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 255

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC+   +D A   L  M+  G+ P +  + +++ G    G++ E+V   +
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +       P     N L+   C  GK   A+ + + MA + +  D  S+ I +       
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    +L   M+   + P   T++  +         + A+ +F ++    +    ++Y 
Sbjct: 376 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +A+E F  M   G      +++ LI G C    + KA  L S   ++
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 495

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       +  I+  L KL R  D   +    +  G   D   Y +L+       K++  
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNI 657
              F+ MV AG+ P+     +L++G     +    L L    + K +  S +L    YNI
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL----YNI 611

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+GL++ G T  A      M   G   +  T+ +++
Sbjct: 612 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/475 (22%), Positives = 216/475 (45%), Gaps = 21/475 (4%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           L  N + ++LI    +T     A+++FK +  Q            ++  L   G ++E  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV-ALNTLMGSLCKYGKIKEAR 346

Query: 117 GLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN----MNSGGFKLSVDVFNV 171
            +   M +K + P+V    I L     N Y   G +  + +    M   G    +  FNV
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIML-----NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 401

Query: 172 VLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           ++ A      G  D  + ++ EM   G+ P+V T   ++  L    +++ A+++F +M  
Sbjct: 402 LIKAYANC--GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           +G  P+   +  +I+G   +  +  +  ++ E+ + G++L++ F+  II  LC+  ++ +
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMD 519

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A  +F +   + L PD + Y  L++  C   +++ A  + + M+  G+ P    +  +V 
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA- 405
           G C++G+ DE ++   +       P    +N +++    AG+   AK    +M +  IA 
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639

Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
             C +++I +R L +N    +A  L   +   +V  D  T +  + G  +    E+A  +
Sbjct: 640 NKC-TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           F  +S   LV  +++YS ++  L +   + EA ++F  M   GC   S   N ++
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 1/133 (0%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K+ +   N ++  + + +R   +   ++  + ++G+VP   T + ++  L +   +E A 
Sbjct: 673 KIDIITLNTMIAGMFQTRR-VEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAE 731

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           D F  M   GC P+SR    V++ L+  + +  + + L ++ +    LE      ++ + 
Sbjct: 732 DMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 791

Query: 283 CRENKLEEAIRLF 295
             +    E IR  
Sbjct: 792 SSKGTCREQIRFL 804


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 212/463 (45%), Gaps = 12/463 (2%)

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           D  R  H     PN+ ++ +V++GL A+ R D++V++L  M   G++ ++  Y  +I  L
Sbjct: 102 DMSREAHP-AARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGL 160

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C   +L+ A+ L   M    + P+ + Y  L+   C + R  D + + E+M  +G+ P  
Sbjct: 161 CDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDV 220

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
            +F   +  LC+ G+  ++V   +        P    +N L+ C C  G    A  +  +
Sbjct: 221 IMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNE 280

Query: 399 MADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS--VVPDCATYSAFVLGKCKL 455
           M D+ +A D  ++N  I  L    E+  A  LL  M+     V PD  T+++ + G CK+
Sbjct: 281 MDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKI 340

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
                A+ V   ++ +  + + ++Y+ L+ G  +V K+  A+ +   +  +G    S ++
Sbjct: 341 GRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTY 400

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           +ILI G   + +VD+A          G       Y  ++  L +L   +  +V+  +M +
Sbjct: 401 SILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDM 460

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
             C LD  AY  ++    +   +K        M+  GL PD  T   L++  A    L  
Sbjct: 461 N-CGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEE 519

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
               + ++ +   V D ++++ LI G   EG   Q + +LDL+
Sbjct: 520 AERVLKQMAASGFVPDVAVFDSLIKGYSAEG---QINKILDLI 559



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 214/481 (44%), Gaps = 43/481 (8%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V + + M  +G+  +V T   L+  L +   ++ AL+    M   G  PN   +  +++G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              + R  D   +  EM  LG++ ++  +T  I  LC++ ++ +A+++  +M    L P+
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  LINCLC+   + +A  +  +M   G+ P    +  ++ GL  V + D ++  LE
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 367 D--KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCE 419
           +  +   +  P     N+++   C  G+   A  + E MA+R  + +  ++N  I     
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR 374

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++  A  L+  ++ S + PD  TYS  + G  KL   + A    R ++ + +  +   
Sbjct: 375 VHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFH 434

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y  L+  LCQ+  + +A+ +F  M  N C L + +++ ++YG C                
Sbjct: 435 YIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGAC---------------- 477

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
            SG                 ++ AK L   L  ML EG A D   Y ILI   ++   L+
Sbjct: 478 KSG----------------DIKAAKQL---LQDMLDEGLAPDAVTYSILINMFAKLGDLE 518

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +       M  +G VPD     SL+ G +   Q++ +   I+++ + +  +D      L+
Sbjct: 519 EAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLV 578

Query: 660 N 660
            
Sbjct: 579 R 579



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 208/465 (44%), Gaps = 51/465 (10%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT ++  LC   + +EA+ L + M+A  +  D +TY  LI  LC+   LD A ++L +M 
Sbjct: 118 YTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMC 177

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFF 390
             G+ P   V+  ++RG C  G++ +     E+       P        ++  C  G+  
Sbjct: 178 GSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIG 237

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  + + M  R +  +  ++N+ I  LC+   +R+A  L   M    V PD  TY+  +
Sbjct: 238 KAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLI 297

Query: 450 LGKCKLCNYEDALRVFRQ-VSAQSLV-LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            G   +   + A+ +  + +   +LV  D ++++ ++ GLC++ ++ +A+ V   M++ G
Sbjct: 298 AGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERG 357

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
           C  +  ++N LI G   + KV+ A+ L S   SSG    + TY+ ++ G  KL       
Sbjct: 358 CMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAE 417

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM-VKAGLVPDRETMLSLLHG 626
           + L  M   G   ++  Y  L+ ++ +   ++   + FN M +  GL             
Sbjct: 418 MFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL------------- 464

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                                   D+  Y+ ++ G  K G    A  LL  ML +G  PD
Sbjct: 465 ------------------------DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPD 500

Query: 687 ATTHGLLVG--SSVGEEIDSRRF--AFDSSSF-PD-SVSDILAEG 725
           A T+ +L+   + +G+  ++ R      +S F PD +V D L +G
Sbjct: 501 AVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKG 545



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/494 (21%), Positives = 215/494 (43%), Gaps = 16/494 (3%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVF---SFVNHYRVNGAMRVLVNMNSGGFKLS 165
            G++ +   L  +M +E +P  R   +S            R + A+ +L +M + G +  
Sbjct: 90  GGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRAD 149

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           V  +  ++  + +        + +  EM  +G+ PNV   + LL     + R +     F
Sbjct: 150 VVTYGTLIRGLCDAAE-LDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVF 208

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             M + G  P+   F   I  L    R+  +V +   M   G++  +  Y  +I  LC+E
Sbjct: 209 EEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKE 268

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV- 344
             + EA+ L   M    + PD +TY  LI  L   L +D A  +LE+MI        DV 
Sbjct: 269 GSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVV 328

Query: 345 -FVDIVRGLCEVGKFDESVNFLEDK------CGYVTSPHNALLECCCNAGKFFLAKCILE 397
            F  ++ GLC++G+  ++++  E        C  VT  +N L+       K  +A  ++ 
Sbjct: 329 TFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVT--YNYLIGGFLRVHKVNMAMNLMS 386

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           ++    +  D  +++I I    +  E+ +A   L  M    +  +   Y   +   C+L 
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             E A+ +F ++   +  LD+++YS ++ G C+   I  A ++   M   G +  + +++
Sbjct: 447 MMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYS 505

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           ILI     +  +++A R+     +SG     + +  ++ G     +   +L ++ +M  +
Sbjct: 506 ILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565

Query: 577 GCALDVEAYCILIQ 590
             A+D +  C L++
Sbjct: 566 NVAIDPKFICTLVR 579



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 4/236 (1%)

Query: 468 VSAQSLVLDSISYSKLVEGLCQVE-KITEAVEVFCCMSKNG---CSLSSSSFNILIYGLC 523
           +SA   V D++SY+ ++  LC+    + +A+ +   MS+        ++ S+ +++ GLC
Sbjct: 67  LSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLC 126

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
             R+ D+A+ L     +SG      TY  ++ GL         L +L +M   G   +V 
Sbjct: 127 ASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVI 186

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y  L++      + +D +  F  M + G+ PD       +  L    ++       + +
Sbjct: 187 VYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIM 246

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           V      +   YN+LIN L KEG   +A  L + M  KG  PD  T+  L+    G
Sbjct: 247 VQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSG 302



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 19/231 (8%)

Query: 507 GCSLSSS--------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS-----TYTKI 553
            CSL S+        S+NI++  LC  R  D    L  LA  S  ++  +     +YT +
Sbjct: 63  ACSLLSALPDVRDAVSYNIVLAALC-RRGGDLRQALSLLADMSREAHPAARPNAVSYTMV 121

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           M GL   +R  + + +L  M   G   DV  Y  LI+ + +  +L         M  +G+
Sbjct: 122 MRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGV 181

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+      LL G     +   VS    ++       D  M+   I+ L K+G   +A  
Sbjct: 182 HPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVK 241

Query: 674 LLDLMLGKGWVPDATTHGLLVG-----SSVGEEIDSRRFAFDSSSFPDSVS 719
           + D+M+ +G  P+  T+ +L+       SV E +  R    D    PD V+
Sbjct: 242 VKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 236/513 (46%), Gaps = 44/513 (8%)

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKG 246
           F+   ++ +G++P   +L  +L ++  + RI S+L  Q  + H   C   +  ++ ++  
Sbjct: 43  FILNHLLSSGMLPQAQSL--ILRLI--SGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNA 98

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
            + +   D +++ L  M   G     + +  ++ +L R N  ++A  +F ++++  ++ +
Sbjct: 99  YVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKS-KVVLN 157

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             ++  +I   CE                         FV + R L  + +F  S N + 
Sbjct: 158 AYSFGIMITGCCE----------------------AGYFVRVFRLLAVLEEFGLSPNVV- 194

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIR 424
                    +  L++ CC  G   LAK +  KM DR   + +  ++++ +    +    R
Sbjct: 195 --------IYTTLIDGCCKNGDVMLAKNLFCKM-DRLGLVPNQHTYSVLMNGFFKQGLQR 245

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           + +++   M  S +VP+   Y+  +   C     + A +VF ++  + +    ++Y+ L+
Sbjct: 246 EGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+ +K  EAV++   ++K G S +  ++NILI G C + K+D A+RL +   SSG S
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
            T  TY  ++ G  K++     L ++ +M     A     Y ILI + +  N        
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM 425

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            ++M K+GLVPD  T   L+HG      +   S     L       +S +YN +I+G  K
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 665 EGLTSQASYLLDLMLGKGWVPDA----TTHGLL 693
           EG + +A  LL+ M+  G VP+     +T GLL
Sbjct: 486 EGSSYRALRLLNEMVHSGMVPNVASFCSTMGLL 518



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 170/404 (42%), Gaps = 18/404 (4%)

Query: 168 VFNVVLGAIVEEKRGFA----------DFVFVYKEMV---KAGIVPNVDTLNYLLEVLFE 214
           +FNV+   +V     F            FV V++ +    + G+ PNV     L++   +
Sbjct: 146 IFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCK 205

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
              +  A + F +M + G  PN  T+ +++ G        +   +   M   GI      
Sbjct: 206 NGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYA 265

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y C+I   C +  +++A ++F  MR   +    +TY  LI  LC   +  +A  ++  + 
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            +GL+P    +  ++ G C+VGK D +V           SP    +N L+          
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 391 LAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  ++++M +R IA    ++ I I          KA E+   M  S +VPD  TYS  +
Sbjct: 386 GALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLI 445

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G C   N ++A + F+ +    L  +S+ Y+ ++ G C+      A+ +   M  +G  
Sbjct: 446 HGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            + +SF   +  LC   K  +A  L     +SG   + S Y  +
Sbjct: 506 PNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 150/355 (42%), Gaps = 38/355 (10%)

Query: 93  QHTADTYCKMILKLGLAGNVEEMEG--LCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
           QHT         K GL     + EG  + +NM +        A   L+  + N   V+ A
Sbjct: 228 QHTYSVLMNGFFKQGL-----QREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKA 282

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
            +V   M   G    V  +N+++G +   K+ F + V +  ++ K G+ PN+ T N L+ 
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKK-FGEAVKLVHKVNKVGLSPNIVTYNILIN 341

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
              +  ++++A+  F ++   G  P   T+  +I G      +  ++ ++ EM +  I  
Sbjct: 342 GFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAR 401

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
               YT +I    R N  ++A  +  +M    L+PD  TY  LI+  C N  + +A+   
Sbjct: 402 SKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPF 461

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
           + +  + L P   ++  ++ G C+ G    ++  L +        H+ ++    N   F 
Sbjct: 462 KSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV------HSGMVP---NVASF- 511

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                           C +  +    LC +E+ ++A  LLG+M+ S + P  + Y
Sbjct: 512 ----------------CSTMGL----LCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 211/489 (43%), Gaps = 52/489 (10%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV+++  + R           +  G KLSV   N ++  +V+      D  FVYKEM++ 
Sbjct: 99  LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGE-IGDMEFVYKEMIRR 157

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD-- 254
            I P + + N ++  L +  ++  A D    M  +G   N  T+  +I G     ++   
Sbjct: 158 RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217

Query: 255 -DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             + +IL EM   GI      +  +I   C++  +  A+++F  M    + P+ +TY  L
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL 277

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           IN LC N ++++A  + + M+   L P      +I+                        
Sbjct: 278 INGLCNNGKVNEATALRDQMVNSCLKP------NII------------------------ 307

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGR 432
             HNALL   C       A  + + M  + I  +  ++NI I   C++E +  A+ L   
Sbjct: 308 -THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRI 366

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+   V PD +TY+  + G C+  + E A  +  ++  + L  D I+Y+ L++ LC   +
Sbjct: 367 MLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGE 426

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + +A+ +   M + G   S  ++N +I G C    +  A+ LRS     G     +TY  
Sbjct: 427 MKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNV 486

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K  + +D   +L +ML +G   +   Y I+ + M E+                G
Sbjct: 487 LIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEK----------------G 530

Query: 613 LVPDRETML 621
            VPD E  L
Sbjct: 531 FVPDIEGHL 539



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 220/481 (45%), Gaps = 40/481 (8%)

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
           C NS   +I++     N R            D G++L ++    ++  L +  ++ +   
Sbjct: 90  CANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEF 149

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           ++K M    + P  +++  +IN LC+  +L+ A DI+EDM V G++     +  ++ G C
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNI 412
           ++GK                             GK + A  IL++M AD    +  ++NI
Sbjct: 210 KMGKI----------------------------GKMYKADAILKEMRADGICPNEVTFNI 241

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I   C+++ +  A ++   M    V P+  TY++ + G C      +A  +  Q+    
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  + I+++ L+ G C+ + + +A E+F  M K G + + +++NILI   C    ++ A 
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            L  +    G     STY  ++ GL +   L+ A++L+   ++M  +    D+  Y ILI
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLV---SEMDTKHLKADLITYNILI 418

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            S+  + ++K      + M + GL P + T  +++ G      L    +  +++     +
Sbjct: 419 DSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRL 478

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
            + + YN+LI G  K+     A+ LL+ ML KG +P+  T+ +     V EE+  + F  
Sbjct: 479 ANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI-----VTEEMMEKGFVP 533

Query: 710 D 710
           D
Sbjct: 534 D 534



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 185/392 (47%), Gaps = 25/392 (6%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G + +ME + + M++ R   +   LIS   ++       ++N A  ++ +M   G   +V
Sbjct: 142 GEIGDMEFVYKEMIRRR---IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANV 198

Query: 167 DVFNVV------LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
             +N +      +G I +  +  A    + KEM   GI PN  T N L++   +   + +
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYKADA----ILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A+  F  M+++G  PN  T+  +I GL  N +V+++ ++  +M +  ++  +  +  ++ 
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C+   +++A  LF  M    + P+  TY  LI+  C++  ++DA  +   M+  G+ P
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKC 394
               +  ++ GLC  G  + + N + +      K   +T  +N L++  CN G+   A  
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT--YNILIDSLCNKGEMKKALR 432

Query: 395 ILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +L++M  + +     ++N  I   C+   +R A  L  +M     + + ATY+  + G C
Sbjct: 433 LLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFC 492

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           K    EDA  +  ++  + L+ + ++Y  + E
Sbjct: 493 KKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 135/334 (40%), Gaps = 83/334 (24%)

Query: 97  DTYCKM--ILKLGLAGNV-EEM--EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           D YCKM  I K+  A  + +EM  +G+C N V             L+  F     V+ AM
Sbjct: 206 DGYCKMGKIGKMYKADAILKEMRADGICPNEV---------TFNILIDGFCKDKNVSAAM 256

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVF------------------ 188
           +V   MN  G K +V  +N ++  +     V E     D +                   
Sbjct: 257 KVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF 316

Query: 189 -----------VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
                      ++ +M K GI PNV T N L++   +   +E A   +R M  KG CP+ 
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV 376

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            T+  +I GL     ++ + +++ EM    ++ +L  Y  +I  LC + ++++A+RL   
Sbjct: 377 STYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDE 436

Query: 298 MRALDLMPDELTYEELINCLCE--------NLR--------------------------- 322
           M    L P +LTY  +I+  C+        NLR                           
Sbjct: 437 MCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDK 496

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           L+DAN +L +M+  GL P    +  +   + E G
Sbjct: 497 LEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score = 46.6 bits (109), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 10/174 (5%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVL 154
           TY  +I  L   G++E    L   M  +   +++  LI+   L+ S  N   +  A+R+L
Sbjct: 378 TYNCLIAGLCRKGDLEAARNLVSEMDTK---HLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M   G K S   +N ++    +E    A  + +  +M K G + NV T N L++   +
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCKEGNLRA-ALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
            +++E A      M +KG  PN  T+EIV + ++    V D   I G ++ + +
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD---IEGHLYKVAV 544


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 225/504 (44%), Gaps = 5/504 (0%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++KEMV+ GI P++ T N ++  L +   ++ A    R+M  K   PN+ T+  +I G  
Sbjct: 254 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 313

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           +  +  ++V +  EM    I  ++   + ++  LC+  K++EA  +F  M      PD  
Sbjct: 314 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 373

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           +Y  ++N       L D  D+ + M+  G+ P    F  +++     G  D+++    + 
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
             +   P    +  ++   C  GK   A     +M D+ +A D  ++N  I+  C +  +
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 493

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA EL+  ++ + +  D   +S+ +   CKL    DA  +F       L  D++ YS L
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 553

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G C V K+ +A+ VF  M   G   +   +  L+ G C + ++D+ + L       G 
Sbjct: 554 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 613

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             +T  Y+ I+ GL +  R     +   +M   G A+D+  Y I+++ + +     +   
Sbjct: 614 KPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 673

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  +    +  +  T+ +++ G+    ++         +     V +   Y+I+I  L 
Sbjct: 674 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLI 733

Query: 664 KEGLTSQASYLLDLMLGKGWVPDA 687
           KEGL  +A  +   M   G  P++
Sbjct: 734 KEGLVEEAEDMFSSMQNAGCEPNS 757



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/513 (22%), Positives = 227/513 (44%), Gaps = 8/513 (1%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + ++++ G+  N+   N+LLE   E  R + ALD    R  + GC P+  ++ I++K L 
Sbjct: 147 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 206

Query: 249 ANSRVDDSVSILGEMFDLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +   +  +L  M + G      +  Y  +I    +E  + +A  LFK M    + PD
Sbjct: 207 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 266

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC+   +D A   L  M+   + P +  + +++ G    G++ E+V   +
Sbjct: 267 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 326

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +   +   P     + L+   C  GK   A+ + + MA + +  D  S+NI +       
Sbjct: 327 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 386

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    +L   M+   + PD  T++  +         + A+ +F ++    +  D ++Y 
Sbjct: 387 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 446

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +A+E F  M   G +    ++N LI G C    + KA  L S   ++
Sbjct: 447 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 506

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       ++ I+  L KL R  D   +    +  G   D   Y +L+       K++  
Sbjct: 507 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 566

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F+ MV AG+ P+     +L++G     ++    S   +++       + +Y+I+I+G
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L++ G T  A      M   G   D  T+ +++
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/582 (21%), Positives = 242/582 (41%), Gaps = 42/582 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G ++++ + N +L    E KR       +     + G VP+V + + LL+ L +  +   
Sbjct: 154 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 213

Query: 221 ALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           A D  R M + G  C PN   +  VI G      V+ +  +  EM   GI  +L  Y  +
Sbjct: 214 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 273

Query: 279 IPMLCRENKLE-----------------------------------EAIRLFKMMRALDL 303
           +  LC+   ++                                   EA+R+FK MR   +
Sbjct: 274 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 333

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +PD +T   L+  LC+  ++ +A D+ + M + G  P    +  ++ G    G   +  +
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393

Query: 364 FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
             +   G   +P     N L++   N G    A  I  +M D  +  D  ++   I  LC
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
              ++  A E   +M+   V PD   Y+  + G C   +   A  +  ++    + LD +
Sbjct: 454 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 513

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
            +S ++  LC++ ++ +A  +F      G    +  +++L+ G C++ K++KA+R+    
Sbjct: 514 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 573

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S+G       Y  ++ G  K+ R  + L +  +ML  G       Y I+I  + +  + 
Sbjct: 574 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 633

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
               + F+ M ++G+  D  T   +L GL              +L + +  ++    N +
Sbjct: 634 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           I+G+++     +A  L   +     VP+  T+ +++ + + E
Sbjct: 694 IDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 196/435 (45%), Gaps = 10/435 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + +T  I M C  R ++ E A+  F  +    L  + +    L+   CE  R D+A 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           DIL      +G  P    +  +++ LC+ GK  ++ + L    + G V SP    +N ++
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G    A  + ++M  R I  D  ++N  +  LC+   + KA   L +MV   V+
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY+  + G      +++A+RVF+++   S++ D ++ S L+  LC+  KI EA +V
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G +    S+NI++ G      +     L  L    G +    T+  ++     
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                  +++  +M   G   DV  Y  +I ++    K+ D    FN M+  G+ PD+  
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G      L      I++++++   LD   ++ +IN L K G    A  + DL +
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 539

Query: 680 GKGWVPDATTHGLLV 694
             G  PDA  + +L+
Sbjct: 540 NVGLHPDAVVYSMLM 554



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 224/507 (44%), Gaps = 33/507 (6%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+KEM +  I+P+V TL+ L+  L +  +I+ A D F  M  KG  P+  ++ I++ G
Sbjct: 322 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 381

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 + D   +   M   GI  +   +  +I        L++A+ +F  MR   + PD
Sbjct: 382 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 441

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +I  LC   ++DDA +    MI  G+ P    +  +++G C  G   ++   + 
Sbjct: 442 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS 501

Query: 367 DKCG--------YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
           +           + +S  N L    C  G+   A+ I +   +  +  D   +++ +   
Sbjct: 502 EIMNNGMHLDIVFFSSIINNL----CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 557

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C   ++ KA  +   MV + + P+   Y   V G CK+   ++ L +FR++  + +   +
Sbjct: 558 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 617

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           I YS +++GL Q  +   A   F  M+++G ++   ++NI++ GL   R  D+AI L   
Sbjct: 618 ILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 677

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
             +        T   ++ G+ + +R ++   + A +       +V  Y I+I +      
Sbjct: 678 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITN------ 731

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY-- 655
                     ++K GLV + E M S +          L++  + +L+  +E++ +  Y  
Sbjct: 732 ----------LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 781

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKG 682
            I       E LT  A  L+DL   KG
Sbjct: 782 KIDERNFSLEHLT--AMLLVDLFSSKG 806



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 134/322 (41%), Gaps = 4/322 (1%)

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRMVVS 436
           L++CC  A +  LA     ++    +  +    N  +   CE +   +A + LL R    
Sbjct: 130 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 189

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS--ISYSKLVEGLCQVEKIT 494
             VPD  +YS  +   C       A  + R ++    V     ++Y+ +++G  +   + 
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A ++F  M + G      ++N +++ LC  R +DKA        +        TY  ++
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G     + K+ + V  +M       DV    +L+ S+ +  K+K+    F+ M   G  
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 369

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  +   +L+G A    L  ++   + ++ D    D   +N+LI      G+  +A  +
Sbjct: 370 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 429

Query: 675 LDLMLGKGWVPDATTHGLLVGS 696
            + M   G  PD  T+  ++ +
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAA 451



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 46/306 (15%)

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           R A    G  V+S   P   TY+  +    +    E AL  F Q+    L ++ I  + L
Sbjct: 109 RAASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHL 165

Query: 484 VEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +EG C+ ++  EA+++    +   GC     S++IL+  LC   K             SG
Sbjct: 166 LEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-------------SG 212

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG---CALDVEAYCILIQSMSEQNKLK 599
                              +A DLL    +M+ EG   C+ +V AY  +I    ++  + 
Sbjct: 213 -------------------QADDLL----RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                F  MV+ G+ PD  T  S++H L     +    + + ++V+   + ++  YN LI
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSSFPDS 717
            G    G   +A  +   M     +PD  T  +L+GS    G +I   R  FD+ +    
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQ 368

Query: 718 VSDILA 723
             D+ +
Sbjct: 369 NPDVFS 374



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 4/217 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           +  AL++F  + +    +     YC ++      G ++E   L + M+ +R       L 
Sbjct: 563 MEKALRVFDAM-VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML-QRGIKPSTILY 620

Query: 136 SLVF-SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
           S++        R   A      M   G  + +  +N+VL  + +  R F + +F++KE+ 
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKN-RCFDEAIFLFKELR 679

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
              +  N+ TLN +++ +F+T R+E A D F  + +    PN  T+ I+I  LI    V+
Sbjct: 680 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVE 739

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           ++  +   M + G +        ++  L ++N++  A
Sbjct: 740 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 117/554 (21%), Positives = 234/554 (42%), Gaps = 76/554 (13%)

Query: 221 ALDQFRRMHKKGCCPNSR-TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           ALD  R M +KG  P S+ T+  VI   +    ++++V +  EM   GI + +   T +I
Sbjct: 293 ALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLI 352

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              C  N+L +A+  F  M    L PD++ +  +I   C+N+ ++ A +I + M  +G+ 
Sbjct: 353 TGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIA 412

Query: 340 PTDDVFVDIVRG----------------------------------LCEVGKFDESVNFL 365
           P+  +   +++G                                  LC+ GK D + +FL
Sbjct: 413 PSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFL 472

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCEN 420
                    P    +N ++   C      LA+ I  +M ++ +   + +++I I    +N
Sbjct: 473 RMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKN 532

Query: 421 EEIRKAYELLGRMVVSSVVPD------------------------------------CAT 444
           ++ + A+E++ +M+ S+   +                                    C +
Sbjct: 533 QDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTS 592

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y++ + G  K  + + A+  +R++S   +  + ++++ L+ G C+  ++  A+E+   M 
Sbjct: 593 YNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMK 652

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
                L   ++  LI G C    +  A  L S     G     S Y  ++ G   L +  
Sbjct: 653 SKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMD 712

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
             + +  +M+ +G + D+  Y  +I  + +   L   +  ++ ++  G+VPD    + L+
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLV 772

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           +GL+   Q    S  + ++       +  +Y+ +I G  +EG  ++A  + D ML KG V
Sbjct: 773 NGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLV 832

Query: 685 PDATTHGLLVGSSV 698
            D T   LLV   V
Sbjct: 833 HDDTIFNLLVSGRV 846



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 117/577 (20%), Positives = 224/577 (38%), Gaps = 86/577 (14%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREAL 134
           DL  AL + + +  +     + +TY  +I+     GN+EE   +   MV    P    A 
Sbjct: 289 DLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAA 348

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            SL+  F N   +  A+     M   G      +F+V++    +        V +YK M 
Sbjct: 349 TSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNME-MEKAVEIYKRMK 407

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESAL----DQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
             GI P+   ++ +++   +    E+AL    D F      G   N + F ++ K     
Sbjct: 408 SVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCN-KIFLLLCK----Q 462

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +VD + S L  M + GI+  + FY  ++   CR   ++ A  +F  M    L P+  TY
Sbjct: 463 GKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTY 522

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--- 367
             LI+   +N    +A +++  MI       + ++  I+ GLC+VG+  ++   L++   
Sbjct: 523 SILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582

Query: 368 ------KC--------GYVT-------------------SPH----NALLECCCNAGKFF 390
                  C        G+                     SP+     +L+   C + +  
Sbjct: 583 EKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMD 642

Query: 391 LAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
           LA  ++ +M  + +  D  ++   I   C+  +++ AY L   ++   ++P+ + Y+  +
Sbjct: 643 LALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLI 702

Query: 450 -----LGK-----------------CKLCNYED-------------ALRVFRQVSAQSLV 474
                LGK                 C L  Y               A  ++ ++ A  +V
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIV 762

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            D I Y  LV GL +  +   A ++   M K   + +   ++ +I G      +++A R+
Sbjct: 763 PDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRV 822

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
                  G  +  + +  ++ G V+   A   +  LA
Sbjct: 823 HDEMLEKGLVHDDTIFNLLVSGRVEKPPAAAKISSLA 859


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 206/494 (41%), Gaps = 73/494 (14%)

Query: 142 VNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFV---YKEMVKAGI 198
           +NH R + A      M + GF LS   ++  +  + + K    +F F+     +M     
Sbjct: 55  INHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVK----NFTFIDELLHDMETLNC 110

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           +P++   N  L +LF   RI+ AL+ F ++ K G  P+  T+ I+I G+    + D ++ 
Sbjct: 111 LPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQ 170

Query: 259 ILGEMFDLG------------------------------------IQLELSFYTCIIPML 282
              +M   G                                    ++L    Y  +I   
Sbjct: 171 FWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGF 230

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           CR  ++++A  +   MR     PD +TY   +N  C+ L LDDA  +L+ M   G+ P  
Sbjct: 231 CRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDV 290

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
             +  +++G+C+              C     P  A L              +  KM  +
Sbjct: 291 YSYNQLLKGICK------------GNC-----PDKAYL-------------LMTNKMWPK 320

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            + D  S+N  I+  C+  +   AY+L   M    + PD  T++ F+       ++  A 
Sbjct: 321 GLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAK 380

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           ++  Q++   L  D I Y+ +++ LC+  K+  A  +FC M + G S    SFN LI G 
Sbjct: 381 KLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGF 440

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   +V +A+ L     + G+     TY  I+ GL++ ++     +V  QM+ +G  LD 
Sbjct: 441 CKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDR 500

Query: 583 EAYCILIQSMSEQN 596
                LI+  S +N
Sbjct: 501 AIAQTLIRGNSIEN 514



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 116/505 (22%), Positives = 213/505 (42%), Gaps = 8/505 (1%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+ EM ++         N  + VL   +R + A   + +M  +G   +S T+   I G
Sbjct: 29  VQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITG 88

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L           +L +M  L    ++  +   + +L  E +++ A+ +F+ +      PD
Sbjct: 89  LCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPD 148

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +I+ +C+  + D A     DMI  G +P +     IV GLC+  K D +   + 
Sbjct: 149 VVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELII 208

Query: 367 D--KCGYV---TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
           D  K G V   T  +NAL+   C AG+   A+ I   M       D  ++N+ + + C+ 
Sbjct: 209 DVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDE 268

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             +  A +LL  M  S + PD  +Y+  + G CK    + A  +         + D +SY
Sbjct: 269 LMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSY 328

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + +++  C++   T A ++F  M + G      +F I I         + A +L      
Sbjct: 329 NTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTE 388

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G S     YT I+  L K  + +    +   M+ +G + DV ++  LI    + +++ +
Sbjct: 389 MGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSE 448

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               +  M   G  PD  T   ++ GL +  ++ +      +++     LD ++   LI 
Sbjct: 449 AMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIR 508

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVP 685
           G   E   +  S  LD    + + P
Sbjct: 509 GNSIE--NASTSRCLDFKFHQNYSP 531



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/490 (22%), Positives = 193/490 (39%), Gaps = 41/490 (8%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I+ A+  F  M +  C   S  +   I  LI +SR D +     +M   G  L    Y+ 
Sbjct: 25  IDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSR 84

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I  LC+         L   M  L+ +PD   +   ++ L    R+D A ++ E ++  G
Sbjct: 85  FITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNG 144

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
             P    +  I+ G+C++ KFD ++ F  D      SP N      C A           
Sbjct: 145 RKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNK----ACGA----------- 189

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELL------GRMVVSSVVPDCATYSAFVLG 451
                           +  LC+  ++  AYEL+      GR+ +S++V     Y+A + G
Sbjct: 190 ---------------IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLV-----YNALISG 229

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+    + A  +   +       D ++Y+  +   C    + +A ++   M ++G    
Sbjct: 230 FCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPD 289

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             S+N L+ G+C     DKA  L +            +Y  I+    K+        +  
Sbjct: 290 VYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFE 349

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M  +G   DV  + I I++   +          + M + GL PD     +++  L    
Sbjct: 350 EMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSG 409

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           ++ +  S    +V      D   +N LING  K    S+A +L + M  +G  PD  T+ 
Sbjct: 410 KVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYK 469

Query: 692 LLVGSSVGEE 701
           L++G  + E+
Sbjct: 470 LIIGGLIEEK 479



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 7/254 (2%)

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y + + G  K    + A++VF ++S  +  + SI Y++ +  L    +   A   +  M 
Sbjct: 12  YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT--SYTTSTYTKIMLGLVKLQR 562
             G SLSS +++  I GLC   KV     +  L +   T           I L L+ ++ 
Sbjct: 72  TRGFSLSSFTYSRFITGLC---KVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128

Query: 563 AKDL-LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
             DL L V  +++  G   DV  Y I+I  + +  K      F+  M+  G  PD +   
Sbjct: 129 RIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACG 188

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           +++ GL DG ++ L    I  ++    V L + +YN LI+G  + G   +A  +   M  
Sbjct: 189 AIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRR 248

Query: 681 KGWVPDATTHGLLV 694
            G  PD  T+ + +
Sbjct: 249 NGCEPDLVTYNVFL 262


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 234/522 (44%), Gaps = 11/522 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  + + G+VP+V T N LL+ + ET   E  L  +  M      P+  TF IV + L 
Sbjct: 294 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 353

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +VD+++ +  EM ++G++ +   Y+  +  LC   K + A  + + +    +  + +
Sbjct: 354 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 413

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  +++ LC+ +RLD+A  +LE+    G  P    +  ++R  C++G    +V+  E  
Sbjct: 414 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 473

Query: 369 C--GYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
              G  T+ H  + LL+C    G    A     K  D  +  D   +NI +   C+N  +
Sbjct: 474 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 533

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A +LL  M    + PD   Y+  + G C     ++A +VF ++   ++  D ++Y+ L
Sbjct: 534 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 593

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
             G C+   + E  ++   M+  G   +S ++ I I G C    + +A  L ++    G 
Sbjct: 594 ASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI 653

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
            +    Y+ ++ G +         ++  ++  +G  +D  +   LI  +     ++  + 
Sbjct: 654 DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASN 713

Query: 604 FFNVMVKAGLVPD---RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              +M++  +VPD      ++S+     D  + HL     + +V     +D  +Y IL+N
Sbjct: 714 VCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHL---WFHDMVQRGLSVDVIVYTILMN 770

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           G  K G   +A  L   M   G  PD   + +L+   + E +
Sbjct: 771 GYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETL 812



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 152/646 (23%), Positives = 247/646 (38%), Gaps = 108/646 (16%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G   SV  +N++L  I E    +   +  Y EM    + P+V T   +   LF+  +++ 
Sbjct: 302 GVVPSVWTWNLLLKFIAETGE-YEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDE 360

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           AL  +  M + G  P++R +   + GL    + D +  IL E+    + +E   Y  ++ 
Sbjct: 361 ALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMD 420

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+E +L+EA +L +        PD   Y  LI   C+   L +A D  E M+  G+  
Sbjct: 421 GLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIET 480

Query: 341 T----------------------------------DDVFVDI-VRGLCEVGKFDESVNFL 365
                                              D V  +I +   C+ G  +E+V  L
Sbjct: 481 NCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLL 540

Query: 366 -EDKCGYVTS---PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
            E K G +T     +  L+   C  G+   A+ + E+M    I  D  ++NI     C++
Sbjct: 541 NEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKS 600

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK-------------------------- 454
             + + ++LL RM    + P+  TY   ++G C+                          
Sbjct: 601 GLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMY 660

Query: 455 ---LCNY------EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
              +C Y      + A  +F +V+ Q  ++D  S SKL+  LC+V  +  A  V   M +
Sbjct: 661 SSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLE 720

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           +       S++ LI   C    +DKA          G S     YT +M G  K  R ++
Sbjct: 721 HDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQE 780

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSM----------------------SEQNKLKDCAL 603
              +  QM   G   DV AY +L+                         +  NKL     
Sbjct: 781 ACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKL----- 835

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             + M    + PD      L+ G      L       ++++      D+  Y  LING  
Sbjct: 836 -LSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYC 894

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
            +G  S+A  LL  M+ KG  PD  T  +L  SS    + SR+  F
Sbjct: 895 SQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSS----LRSRKIQF 936



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 131/625 (20%), Positives = 254/625 (40%), Gaps = 73/625 (11%)

Query: 46  QTTDYEAKIQSLRH----NLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTA 96
           +T +YE  + +        L+PD      + R L     +  AL+++  ++ +   +  A
Sbjct: 319 ETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMT-EMGVKPDA 377

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
             Y   ++ L   G  +    + Q + +E+ P    A   ++       R++ A ++L N
Sbjct: 378 RGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLEN 437

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
               G    V  ++ ++ +  +      + V  Y+ MV  GI  N   ++YLL+   +  
Sbjct: 438 KARQGSNPDVYGYSYLIRSYCK-MGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLG 496

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
               A+  F +    G   +   + I +     N  ++++V +L EM   G+  +   YT
Sbjct: 497 MTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYT 556

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           C+I   C + +++ A ++F+ M   ++ PD +TY  L +  C++  + +  D+L+ M   
Sbjct: 557 CLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQ 616

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDES---VNFLEDK-------------CGYVTSPH---- 376
           GL P    +   + G C  G   E+    N +E+K             CGY+ S      
Sbjct: 617 GLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHA 676

Query: 377 -------------------NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
                              + L+   C  G    A  + + M +  +  D  S++  I  
Sbjct: 677 YMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISI 736

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
            C+N ++ KA+     MV   +  D   Y+  + G CK    ++A ++F Q++   +  D
Sbjct: 737 YCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPD 796

Query: 477 SISYSKLVEGLCQ------VEKITEAVEVFCCMSKNGCSLSS----------SSFNILIY 520
            I+Y+ L++G  +       E I +    F   + +   LSS            + +LI 
Sbjct: 797 VIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLID 856

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEG 577
           G C    + +A  L       G +     YT ++ G     ++ +A+DL   L +M+ +G
Sbjct: 857 GKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDL---LQEMIDKG 913

Query: 578 CALDVEAYCILIQSMSEQNKLKDCA 602
              D   + +L QS     K++ CA
Sbjct: 914 IEPDELTFSVLNQSSLRSRKIQFCA 938



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 1/307 (0%)

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++ I  R L + +++ +A ++   M    V PD   YS+F++G C    Y+ A  +
Sbjct: 340 PDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVI 399

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
            ++++ + + +++++Y+ +++GLC+  ++ EA ++    ++ G +     ++ LI   C 
Sbjct: 400 LQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCK 459

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
           M  +  A+       S G        + ++    KL    + +    +    G  LD   
Sbjct: 460 MGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVI 519

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y I + +  +   + +     N M   GL PD+     L+ G     ++        +++
Sbjct: 520 YNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEML 579

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL-LVGSSVGEEID 703
             +   D   YNIL +G  K GL  +   LLD M  +G  P++ T+G+ +VG   G  + 
Sbjct: 580 KANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLS 639

Query: 704 SRRFAFD 710
                F+
Sbjct: 640 EAEVLFN 646



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/480 (21%), Positives = 198/480 (41%), Gaps = 20/480 (4%)

Query: 229 HKKGCC-PNSRTFEI--VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           H++ C  P S +F +  +IK  I    V  ++ +   +  LG+   +  +  ++  +   
Sbjct: 261 HRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAET 320

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            + E  +  +  M+   L PD  T+  +   L +  ++D+A  +  +M  +G+ P    +
Sbjct: 321 GEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGY 380

Query: 346 VDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              + GLC+ GK+D +   L+    +K       +N +++  C   +   A+ +LE  A 
Sbjct: 381 SSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKAR 440

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           +    D   ++  IR  C+   +  A +    MV   +  +C   S  +    KL    +
Sbjct: 441 QGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSE 500

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+  F +     L LD + Y+  ++  C+   + EAV++   M   G +     +  LI 
Sbjct: 501 AIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLIS 560

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C+  ++  A ++      +       TY  +  G  K     ++  +L +M  +G   
Sbjct: 561 GYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP 620

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS------LLHGLADGSQLH 634
           +   Y I I        L +  + FNV+ + G +   E M S      LL G  D + + 
Sbjct: 621 NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG-IDHIEVMYSSMVCGYLLSGWTDHAYML 679

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            V     ++     ++D    + LIN L + G    AS +  +ML    VPD  ++  L+
Sbjct: 680 FV-----RVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLI 734


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 129/553 (23%), Positives = 234/553 (42%), Gaps = 35/553 (6%)

Query: 147 VNGAMRVLVNMNSGGF-KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDT 204
           ++ AM +L +M  G F +     F   +  + E +R     + ++ +M +     P+V  
Sbjct: 69  LDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR-VEQAMTLFDDMRETCDCAPDVVA 127

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVDDSVSILGEM 263
            N L+    +    + ALD FRR+ ++G C PN+ +F+ ++  L   SR  D++++  EM
Sbjct: 128 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 187

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G++ +++    +I   CR   L +A RL   M A     D  TY  L+N  C   ++
Sbjct: 188 LGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQM 247

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
            +    +E     G   +   +  I++G    G+  E+    E                 
Sbjct: 248 HEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFE----------------- 290

Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
                          M    + D  ++N+ I  LC+++++ +A  L        VV D  
Sbjct: 291 -------------STMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVF 336

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TYS  +    K      AL VF  +     + D++ Y+ L+  L +  K+ EA+E+   M
Sbjct: 337 TYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           ++ G      ++NI+I  L    + +KA     +      S    TY  ++ GL KL+R 
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 456

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            +   +  +M    C  D+  +  LI ++++  +++D       +VK G  P+     +L
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNAL 516

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           + G     Q+         ++  S   DS  Y IL+ G  + G TS A  LL  M+ +G 
Sbjct: 517 ISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 576

Query: 684 VPDATTHGLLVGS 696
            P   T+ +L+ S
Sbjct: 577 TPALATYNVLIRS 589



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 11/325 (3%)

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           DVF   L   + + +   + + +++E  + G+V +V T +YL++   +  R   AL+ F 
Sbjct: 300 DVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFY 359

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M K GC P++  + ++I  L    +VD+++ +L +M   GI  +   Y  +I +L    
Sbjct: 360 NMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCG 419

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           + E+A   F MM+     PD +TY  L+N L +  R D+A D+ ++M      P    F 
Sbjct: 420 RYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFG 479

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPH-------NALLECCCNAGKFFLAKCILEKM 399
            ++  L + G+ +++   LE     V   H       NAL+   C +G+      + + M
Sbjct: 480 TLIDTLAKAGRMEDA---LEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDM 536

Query: 400 ADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
            +     D  ++ I +           A ELL  MV     P  ATY+  +         
Sbjct: 537 IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQV 596

Query: 459 EDALRVFRQVSAQSLVLDSISYSKL 483
           EDA  +F+++ A+    D  +YS L
Sbjct: 597 EDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 2/249 (0%)

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           D+++++  +  LC+V ++ +A+ +F  M +   C+    ++N LI G C     D+A+ +
Sbjct: 88  DTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDM 147

Query: 535 -RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
            R L           ++  +++ L K+ RA D L V  +ML  G   DV     LI    
Sbjct: 148 FRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTC 207

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
               L+      + M       D  T   L++      Q+H V+S +     D   L + 
Sbjct: 208 RLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAV 267

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSS 713
            YN +I G  + G  ++A+ L +  + K  VPD  T+ LL+     ++++     F  + 
Sbjct: 268 NYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAE 327

Query: 714 FPDSVSDIL 722
               V D+ 
Sbjct: 328 QGGVVLDVF 336



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
            +VK G  PN    N L+     + +++   + F+ M +  C P+S T+ I++ G     
Sbjct: 500 RLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRG 559

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
               ++ +L EM   G    L+ Y  +I  L    ++E+A  LFK M A    PD  TY 
Sbjct: 560 HTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYS 619

Query: 312 ELIN 315
            L N
Sbjct: 620 ALPN 623


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 253/566 (44%), Gaps = 47/566 (8%)

Query: 167 DVFN--VVLGAIVEE-KRGFADFVFVYKEMVKAGIV--PNVDTLNYLLEVLFETNRIESA 221
           DVF+  ++L ++ ++ K G AD +   + M + G V  P+V   N +++  F+   +  A
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLL--RMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKA 238

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            D F+ M ++G  P+  T+  V+  L     +D + + L +M + G+      Y  +I  
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
                + +EA+R+FK MR   ++PD +T+  L+  LC+  ++ +A D+ + M + G  P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  ++ G    G   +  +  +   G   +P     N L++   N G    A  I  
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 418

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M D  +  +  ++   I  LC   ++  A E   +M+   V PD   Y   + G C   
Sbjct: 419 EMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           +   A  +  ++    + LD + +S ++  LC++ ++ +A  +F      G   ++  ++
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           +L+ G C++ K++KA+R+     S+G       Y  ++ G  K+ R  + L +  +ML +
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL--------- 627
           G       Y I+I  + E  +     + F+ M ++G+  ++ T   +L GL         
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 658

Query: 628 -------------ADGSQLHLVSSGI--NKLVSDSEVLDSSM-----------YNILING 661
                         D   L+ + +G+   + V +++ L +S+           Y+I+I  
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDA 687
           L KEGL  +A  +   M   G  PD+
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDS 744



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/517 (22%), Positives = 228/517 (44%), Gaps = 16/517 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + ++++ G+  ++   N+LL+   E  R + ALD    R  + GC P+  ++ I++K L 
Sbjct: 134 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193

Query: 249 ANSRVDDSVSILGEMFDLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +   +  +L  M + G     ++  Y  +I    +E  + +A  LFK M    + PD
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC+   +D A   L  M+  G+ P +  + +++ G    G++ E+V   +
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +       P     N L+   C  GK   A+ + + MA + +  D  S+NI +       
Sbjct: 314 EMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    +L   M+   + P   T++  +         + A+ +F ++    +  + ++Y+
Sbjct: 374 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYT 433

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +A+E F  M   G +    +++ LI G C    + KA  L S   ++
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       ++ I+  L KL R  D   +    +  G       Y +L+       K++  
Sbjct: 494 GMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNI 657
              F+ MV AG+ P+     +L++G     +    L L    + K +  S +L    YNI
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL----YNI 609

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+GL++ G T  A      M   G   +  T+ +++
Sbjct: 610 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 198/435 (45%), Gaps = 10/435 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + +T  I M C  R ++ E A+  F  +    L  D +    L+   CE  R D+A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           DIL      +G  P    +  +++ LC+ GK  ++ + L    + G V SP    +N ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +     G    A  + ++M  R I  D  +++  +  LC+   + KA   L +MV   V+
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+  TY+  + G      +++A+RVF+++  QS++ D ++++ L+  LC+  KI EA +V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G +    S+NI++ G      +     L  L    G +    T+  ++     
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                  +++  +M   G   +V  Y  +I ++    K+ D    FN M+  G+ PD+  
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G      L      I++++++   LD  +++ +IN L K G    A  + DL +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 680 GKGWVPDATTHGLLV 694
             G  P A  + +L+
Sbjct: 527 NVGLHPTAVVYSMLM 541



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 138/603 (22%), Positives = 259/603 (42%), Gaps = 63/603 (10%)

Query: 32  TIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLI--RVLDN---TNDLSSALKIFKWV 86
           +I L S  D  KS Q  D    +       SPD +    V+D      D++ A  +FK +
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 245

Query: 87  SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHY 145
            +Q+       TY  ++  L  A  +++ E   + MV K   PN      +L++ + +  
Sbjct: 246 -VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN-NWTYNNLIYGYSSTG 303

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVP 200
           +   A+RV   M        V  FN+++G++     ++E R       V+  M   G  P
Sbjct: 304 QWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD------VFDTMAMKGQNP 357

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           +V + N +L        +    D F  M   G  P   TF ++IK       +D ++ I 
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 417

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM D G++  +  YT +I  LCR  K+++A+  F  M    + PD+  Y  LI   C +
Sbjct: 418 NEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
             L  A +++ +++  G+     +F  I+  LC++G+  ++ N  +        P    +
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVY 537

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           + L++  C  GK                                  + KA  +   MV +
Sbjct: 538 SMLMDGYCLVGK----------------------------------MEKALRVFDAMVSA 563

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            + P+   Y   V G CK+   ++ L +FR++  + +   +I Y+ +++GL +  +   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
              F  M+++G +++  +++I++ GL   R  D+AI L     +        T   ++ G
Sbjct: 624 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 683

Query: 557 LVKLQR---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + + +R   AKDL   +++  +  C   V  Y I+I ++ ++  +++    F+ M  AG 
Sbjct: 684 MFQTRRVEEAKDLFASISRSGLVPC---VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740

Query: 614 VPD 616
            PD
Sbjct: 741 EPD 743



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 108/478 (22%), Positives = 220/478 (46%), Gaps = 27/478 (5%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           L +N + ++LI    +T     A+++FK +  Q        T+  ++  L   G ++E  
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV-TFNMLMGSLCKYGKIKEAR 344

Query: 117 GLCQNM-VKERYPNVREALISLVFSF---VNHYRVNGAMRVLVN----MNSGGFKLSVDV 168
            +   M +K + P+V        FS+   +N Y   G +  + +    M   G    +  
Sbjct: 345 DVFDTMAMKGQNPDV--------FSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396

Query: 169 FNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           FNV++ A      G  D  + ++ EM   G+ PNV T   ++  L    +++ A+++F +
Sbjct: 397 FNVLIKAYANC--GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQ 454

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +G  P+   +  +I+G   +  +  +  ++ E+ + G+ L++  ++ II  LC+  +
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGR 514

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           + +A  +F +   + L P  + Y  L++  C   +++ A  + + M+  G+ P D V+  
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           +V G C++G+ DE ++   +       P    +N +++    AG+   AK    +M +  
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 404 IA--DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
           IA   C +++I +R L +N    +A  L   +   +V  D  T +  + G  +    E+A
Sbjct: 635 IAMNKC-TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 693

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
             +F  +S   LV   ++YS ++  L +   + EA ++F  M   GC   S   N ++
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 46/306 (15%)

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           R A    G  V+S   P   TY+  +    +    E AL  F Q+    L +D I  + L
Sbjct: 96  RAASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHL 152

Query: 484 VEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++G C+ ++  EA+++    +   GC     S++IL+  LC   K             SG
Sbjct: 153 LKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-------------SG 199

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG---CALDVEAYCILIQSMSEQNKLK 599
                              +A DLL    +M+ EG   C+ DV AY  +I    ++  + 
Sbjct: 200 -------------------QADDLL----RMMAEGGAVCSPDVVAYNTVIDGFFKEGDVN 236

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
                F  MV+ G+ PD  T  S++H L     +    + + ++V+   + ++  YN LI
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFDSSSFPDS 717
            G    G   +A  +   M  +  +PD  T  +L+GS    G +I   R  FD+ +    
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYG-KIKEARDVFDTMAMKGQ 355

Query: 718 VSDILA 723
             D+ +
Sbjct: 356 NPDVFS 361



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 1/133 (0%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K+ +   N ++  + + +R   +   ++  + ++G+VP V T + ++  L +   +E A 
Sbjct: 671 KIDIITLNTMIAGMFQTRR-VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           D F  M   GC P+SR    V++ L+  + +  + + L ++ +    LE      ++ + 
Sbjct: 730 DMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789

Query: 283 CRENKLEEAIRLF 295
             +    E IR  
Sbjct: 790 SSKGTCREHIRFL 802


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 173/777 (22%), Positives = 307/777 (39%), Gaps = 115/777 (14%)

Query: 17  WVN---LTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRV---- 69
           WV+   L SC   +   N I L + + +   +   + E  I +   N   +HL  +    
Sbjct: 2   WVSSIKLFSCRKYIKHVNFIRLYTVSALAHFNYPIEEEQTINTHYQNPVTNHLFEINTAK 61

Query: 70  ----LDN-TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
               L+N  N+ S A   F  +  +  + H   TY  ++  L   G   +++ +   ++K
Sbjct: 62  VVITLNNLRNEPSLAFSYFNQLK-ESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIK 120

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN---------SGGFKLSVDVF------ 169
           +   N+   +++L F  +     N +  VLV ++         SG F  + DV       
Sbjct: 121 KD-GNLDFGIVNL-FEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHC 178

Query: 170 ---------NVVLGAIVEEKRGFADF-VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
                    N ++  +VE ++   D  + +Y+++   G+ PN  T    ++       + 
Sbjct: 179 GFAPQILSCNFLMNRLVESRK--VDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLA 236

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A+D FR M + G  PNS ++   I+GL  + R D    +L ++ +  I +++  YT +I
Sbjct: 237 EAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVI 296

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
              C E KL+EA  + + M      PD   Y  LI+  C    L  A  + ++M+  G+ 
Sbjct: 297 RGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVK 356

Query: 340 PTDDVFVDIVRGLCEVGKFDESVN----------FLEDKCGYVTSPHNALLECCCNAGKF 389
               +   I++GL ++G   E  N          F ++ C      +N +++  C  GK 
Sbjct: 357 TNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEAC------YNVVMDALCKLGKV 410

Query: 390 FLAKCILEKMADRKI------------------------------------ADCDSWNIP 413
             A  +L +M  +K+                                     D  ++N+ 
Sbjct: 411 EEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVL 470

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
                 N   ++A  LL  M    V PD  T++  + G C     +DA   F  +  + L
Sbjct: 471 AGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCL 530

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
                +YS +V G C+   + +A  +   +SK G  L  +SF  L+  LC     +KA+ 
Sbjct: 531 E----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALC 586

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L     +   + T   Y+K++  L +    +    V   ++  G A DV  Y I+I    
Sbjct: 587 LLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYC 646

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
             NK+K+       M   G+ PD  T   LL+  +    L   SS ++ + S   ++D S
Sbjct: 647 RMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSK-IDLRSSSSSLDAMKSKENMMDPS 705

Query: 654 M----------------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                            Y +LI+   K      A  L + M+ +G  PD  T+  L+
Sbjct: 706 ALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALL 762



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 141/654 (21%), Positives = 264/654 (40%), Gaps = 63/654 (9%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGL--AGNVEEMEGL 118
           LS + L+  L  +  +  A+ I++ +   K F    + Y   I   G    GN+ E   +
Sbjct: 185 LSCNFLMNRLVESRKVDMAIAIYRQL---KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDV 241

Query: 119 CQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE 178
            ++M +        +  + +     H R +   +VL ++ +    + V  + VV+     
Sbjct: 242 FRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCS 301

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           E +   +   + +EM K G  P+V     L+        +  AL     M  KG   N  
Sbjct: 302 EMK-LKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCV 360

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
               +++GL       +  +   E   +GI  + + Y  ++  LC+  K+EEA+ L   M
Sbjct: 361 ILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEM 420

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +   ++PD + Y  +I+      ++ DA +I  +M  IG  P    +  +  G    G  
Sbjct: 421 KGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLT 480

Query: 359 DESV---NFLEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
            E++   N++E +     T  HN ++E  C  GK   A+   + + ++ +   ++++  +
Sbjct: 481 QEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCL---ENYSAMV 537

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              CE   + KA+ LL R+     +   A++   +   C   + E AL +   + A ++ 
Sbjct: 538 NGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNIN 597

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
              I YSK++  L Q  ++ +A  VF  +   G +    ++ I+I G C M K+ +A  +
Sbjct: 598 PTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHV 657

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQ-----------RAKDLLVVLAQMLVEGCALDVE 583
                + G      TYT ++    K+            ++K+ ++  + +  E   +D++
Sbjct: 658 LGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIK 717

Query: 584 A----YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
                Y +LI    + N ++D    FN M+  GL PD  T                    
Sbjct: 718 PDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVT-------------------- 757

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                          Y  L++G    G   +A  L D ML KG  PDA T  +L
Sbjct: 758 ---------------YTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 6/272 (2%)

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ ++RQ+ A  L  +  +Y+  ++G C+   + EA++VF  M ++G + +S S+   I 
Sbjct: 203 AIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIE 262

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GLC+  + D   ++     ++        YT ++ G     + K+   +L +M  +G A 
Sbjct: 263 GLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAP 322

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
           DV  YC LI        L       + MV  G+  +   + S+L GL+       V++  
Sbjct: 323 DVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQF 382

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVG 695
            +        D + YN++++ L K G   +A  LL  M GK  VPD   +     G  + 
Sbjct: 383 KEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLK 442

Query: 696 SSVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
             V + ++  R   D    PD V+ ++LA G 
Sbjct: 443 GKVVDALNIYREMKDIGHKPDIVTYNVLAGGF 474


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 183/369 (49%), Gaps = 16/369 (4%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +LG++V+ K  +   +++ ++M   GI PN+   N L+    +   I SA     ++
Sbjct: 65  FNKILGSLVKSKH-YHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKI 123

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL----------GIQLELSFYTCI 278
            K G  PN+ T   +IKGL  N ++ D   I+G++ D            I  ++  +T +
Sbjct: 124 LKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTIL 183

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           +   C+E +++EA  +  MM    + P  +TY  L++      +++ A  I   M  +G+
Sbjct: 184 VDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGV 243

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
           +P    +  ++ G C++   DE++  L++       P    +++L++  C +GK   A  
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK 303

Query: 395 ILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           ++++M DR +  +  +++  +  LC+N ++  A  LL +M    + P+  TY+  + G C
Sbjct: 304 LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLC 363

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           +    EDA +VF  +  +   L+  +Y+ +++G C      EA+ +   M  NGC  ++ 
Sbjct: 364 QSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAK 423

Query: 514 SFNILIYGL 522
           ++ I+I  L
Sbjct: 424 TYEIIILSL 432



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 187/424 (44%), Gaps = 42/424 (9%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D V ++  +++    P     N +L  L ++    + L   ++M  +G  PN     I+I
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 104

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE----------NKLEEAIRL 294
                   +  + S+L ++  +G +        +I  LC             KL++A+ L
Sbjct: 105 NSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDL 164

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           F  M   ++ PD  T+  L++  C+  R+ +A ++L  M++ G+ P              
Sbjct: 165 FNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKP-------------- 210

Query: 355 VGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
                          G VT  +N+L++      +   AK I   MA   ++ D  S++I 
Sbjct: 211 ---------------GVVT--YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSIL 253

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I   C+ + + +A ELL  M    ++P+  TYS+ + G CK      AL++  ++  +  
Sbjct: 254 INGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQ 313

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             + ++YS +++ LC+  ++  A+ +   M   G   +  ++ ILI GLC   K++ A +
Sbjct: 314 PPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARK 373

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +       G +    TYT ++ G        + L +L++M   GC  + + Y I+I S+ 
Sbjct: 374 VFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLF 433

Query: 594 EQNK 597
           ++++
Sbjct: 434 KKDE 437



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/415 (21%), Positives = 180/415 (43%), Gaps = 28/415 (6%)

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
             N +++A+ LF  +   +  P  + + +++  L ++        + + M   G+ P   
Sbjct: 39  NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98

Query: 344 VFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKM 399
               ++   C++G    + + L    K GY   T   N L++  C  GK     CI+ K+
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            D                        A +L  +M++ ++ PD  T++  V G CK    +
Sbjct: 159 KD------------------------AVDLFNKMILENINPDVYTFTILVDGFCKEGRVK 194

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           +A  V   +  Q +    ++Y+ L++G   V+++ +A  +F  M++ G S    S++ILI
Sbjct: 195 EAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILI 254

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C ++ +D+A+ L    +         TY+ ++ GL K  +    L ++ +M   G  
Sbjct: 255 NGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQP 314

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
            ++  Y  ++ ++ + +++ +       M   G+ P+  T   L+ GL    +L      
Sbjct: 315 PNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKV 374

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              L+     L+   Y ++I G   +GL  +A  LL  M   G +P+A T+ +++
Sbjct: 375 FEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 130/260 (50%), Gaps = 5/260 (1%)

Query: 108 LAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           + G +++   L   M+ E   P+V    I LV  F    RV  A  VL  M   G K  V
Sbjct: 154 IVGKLKDAVDLFNKMILENINPDVYTFTI-LVDGFCKEGRVKEAKNVLAMMMIQGIKPGV 212

Query: 167 DVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
             +N ++ G  + ++   A  +F    M + G+ P++ + + L+    +   ++ A++  
Sbjct: 213 VTYNSLMDGYFLVKQVNKAKSIF--NTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELL 270

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           + MH K   PN  T+  +I GL  + ++  ++ ++ EM D G    +  Y+ I+  LC+ 
Sbjct: 271 KEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKN 330

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
           ++++ AI L   M+   + P+  TY  LI  LC++ +L+DA  + ED++V G       +
Sbjct: 331 HQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTY 390

Query: 346 VDIVRGLCEVGKFDESVNFL 365
             +++G C+ G FDE++  L
Sbjct: 391 TVMIQGFCDKGLFDEALTLL 410



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 11/250 (4%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  GI P V T N L++  F   ++  A   F  M + G  P+ +++ I+I G      
Sbjct: 203 MMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM 262

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D+++ +L EM    I   +  Y+ +I  LC+  K+  A++L   M      P+ +TY  
Sbjct: 263 MDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSS 322

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           +++ LC+N ++D+A  +L  M   G+ P    +  +++GLC+ GK +++    ED    +
Sbjct: 323 ILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFED---LL 379

Query: 373 TSPHN-------ALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIR 424
              HN        +++  C+ G F  A  +L KM D   I +  ++ I I  L + +E  
Sbjct: 380 VKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENE 439

Query: 425 KAYELLGRMV 434
            A +LL  M+
Sbjct: 440 MAEKLLCEMI 449



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 1/168 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I  L  +G +     L   M     P       S++ +   +++V+ A+ +L  M
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G + ++  + +++  + +  +   D   V+++++  G   NV T   +++   +   
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGK-LEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
            + AL    +M   GC PN++T+EI+I  L      + +  +L EM +
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 126/583 (21%), Positives = 244/583 (41%), Gaps = 53/583 (9%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R F D + ++ ++V A + P++   + ++  L E      A +    M    C  +   +
Sbjct: 110 RRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVY 169

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            ++I GL  + R+ +++ I   +   G++  +  Y           K  EA  LFK M  
Sbjct: 170 NVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY---------GKFNEAELLFKEMGE 220

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             L  + +TY  LI+  C    +D+A   L+ M    +  T   +  ++ G C++G    
Sbjct: 221 KGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASA 280

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIR 415
           +  + ++      +P    + +L+   CN G++  A  +  +M  + I+ +  ++   I 
Sbjct: 281 AKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIIS 340

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC    + +A  L G M    ++P   TY+  + G C+  N  +A  +  ++  +  V 
Sbjct: 341 GLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVP 400

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D+ +Y  L+ GLC V +++EA E    + K+   L++  ++ L++G C   +   A+   
Sbjct: 401 DTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSAC 460

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            +    G +     Y  ++ G  +    + L  +L +M   G   D   Y  +I   S+ 
Sbjct: 461 RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKA 520

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA-----DGSQL----------------- 633
             LK+    +++MV  G +P+  T  +L++GL      D ++L                 
Sbjct: 521 GNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITY 580

Query: 634 -----HLVSSG-INKLVSDSEVL------DSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
                HL   G + K V     +       +  YNILI G  + G   +A+ LL  M   
Sbjct: 581 GCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDN 640

Query: 682 GWVPDATTHGLLV-----GSSVGEEIDSRRFAFDSSSFPDSVS 719
             +PD  T+  ++      S++ E I       D    PD+++
Sbjct: 641 DILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLA 683



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 140/590 (23%), Positives = 250/590 (42%), Gaps = 48/590 (8%)

Query: 60  NLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           N+ PD      ++R L    D + A ++  W+   +         CK+ +   +  NV  
Sbjct: 126 NVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQ---------CKLSI---VVYNVL- 172

Query: 115 MEGLCQNMVKERYPNVREALI--SLVFSFVNHY-RVNGAMRVLVNMNSGGFKLSVDVFNV 171
           + GLC++        ++  L+   L  + V +Y + N A  +   M   G   +   +++
Sbjct: 173 IHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSI 232

Query: 172 VLGAIVEEKRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           ++ +    +RG  D    +  +M KA I   V   N L+    +     +A   F  M  
Sbjct: 233 LIDSFC--RRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMID 290

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           KG  P   T+  +I G         +  +  EM   GI      +T II  LCR N + E
Sbjct: 291 KGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAE 350

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           AIRLF  M+   +MP E+TY  +I   C +  + +A  +L++M+  G  P    +  ++ 
Sbjct: 351 AIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLIS 410

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNALLECC--------CNAGKFFLAKCILEKMADR 402
           GLC VG+  E+  F++D    +   H+ L   C        C  G+F  A      M +R
Sbjct: 411 GLCSVGRVSEAKEFVDD----LHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVER 466

Query: 403 KIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            +A D   + I I       + R  + LL  M    + PD   Y+  +    K  N ++A
Sbjct: 467 GVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEA 526

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             ++  +  +  + + ++Y+ L+ GLC+   + +A      +SK    +S  + N + YG
Sbjct: 527 FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE----LLSKETL-VSDVTPNHITYG 581

Query: 522 -----LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
                L     ++KA++L   A   G   TT +Y  ++ G  +L + ++   +L  M   
Sbjct: 582 CFLDHLTRGGNMEKAVQLHH-AMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDN 640

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
               D   Y  +I    +++ L++    ++ M+  GL PD      L+HG
Sbjct: 641 DILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHG 690



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/502 (21%), Positives = 206/502 (41%), Gaps = 31/502 (6%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           +L+  R M      P  RT   ++ GL+   R +D + +  ++    +Q ++  Y+ ++ 
Sbjct: 80  SLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVR 139

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL----------------- 323
            LC      +A  +   M         + Y  LI+ LC++ R+                 
Sbjct: 140 SLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEA 199

Query: 324 ---------DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG---- 370
                    ++A  + ++M   GL      +  ++   C  G+ D ++ FL+        
Sbjct: 200 NVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIE 259

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYEL 429
           +   P+N+L+   C  G    AK   ++M D+ +     ++   I   C   E  KA+++
Sbjct: 260 FTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKV 319

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
              M    + P+  T++A + G C+     +A+R+F ++  + ++   ++Y+ ++EG C+
Sbjct: 320 YNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCR 379

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
              I+EA  +   M   G    + ++  LI GLC + +V +A       +          
Sbjct: 380 SGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMC 439

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y+ ++ G  K  R KD +     M+  G A+D+  Y ILI   + ++  +        M 
Sbjct: 440 YSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMH 499

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             GL PD     +++   +    L       + +V +  + +   Y  LINGL K GL  
Sbjct: 500 NHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMD 559

Query: 670 QASYLLDLMLGKGWVPDATTHG 691
           +A  L    L     P+  T+G
Sbjct: 560 KAELLSKETLVSDVTPNHITYG 581



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 4/320 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EMV  G VP+  T   L+  L    R+  A +    +HK     N+  +  ++ G     
Sbjct: 392 EMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEG 451

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R  D+VS    M + G+ ++L  Y  +I    RE+       L K M    L PD + Y 
Sbjct: 452 RFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYT 511

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+   +   L +A  + + M+  G  P    +  ++ GLC+ G  D++    ++    
Sbjct: 512 NMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVS 571

Query: 372 VTSPHNALLECCCN----AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
             +P++    C  +     G    A  +   M    +A   S+NI IR  C   +I +A 
Sbjct: 572 DVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEAT 631

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +LL  M  + ++PD  TYS  +  +CK  N ++A++++  +  + L  D+++YS LV G 
Sbjct: 632 KLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGC 691

Query: 488 CQVEKITEAVEVFCCMSKNG 507
           C   ++ +A E+   M + G
Sbjct: 692 CIAGELEKAFELRDEMIRRG 711



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/418 (21%), Positives = 180/418 (43%), Gaps = 21/418 (5%)

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           ++M+  +LMP+  T   L+N L    R +D   + +D++   + P   ++  +VR LCE+
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 356 GKFD---ESVNFLE-DKCGYVTSPHNALLECCCNAGKFFLA----KCILEKMADRKIADC 407
             F+   E ++++E ++C      +N L+   C + + + A     C+++K  +  +   
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANV--- 201

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
                    +    +  +A  L   M    +  +  TYS  +   C+    ++A+    +
Sbjct: 202 ---------VTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDK 252

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++  S+      Y+ L+ G C++   + A   F  M   G + +  ++  LI G C   +
Sbjct: 253 MTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGE 312

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
             KA ++ +   + G S  T T+T I+ GL +     + + +  +M           Y +
Sbjct: 313 WHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNV 372

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I+       + +     + MV  G VPD  T   L+ GL    ++      ++ L  D 
Sbjct: 373 MIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH 432

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
             L++  Y+ L++G  KEG    A     +M+ +G   D   + +L+  +  E  D+R
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH-DTR 489



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/477 (19%), Positives = 201/477 (42%), Gaps = 21/477 (4%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           D+ I  LD     S    ++ + S+        + YCK+       GN    +     M+
Sbjct: 244 DNAIGFLDKMTKASIEFTVYPYNSL-------INGYCKL-------GNASAAKYYFDEMI 289

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
            +          SL+  + N    + A +V   M + G   +   F  ++  +       
Sbjct: 290 DKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANM-M 348

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           A+ + ++ EM +  I+P+  T N ++E    +  I  A      M  KG  P++ T+  +
Sbjct: 349 AEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I GL +  RV ++   + ++     +L    Y+ ++   C+E + ++A+   ++M    +
Sbjct: 409 ISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             D + Y  LI+             +L++M   GL P   ++ +++    + G   E+  
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528

Query: 364 F----LEDKCGYVTSPHNALLECCCNAGKFFLAKCI-LEKMADRKIADCDSWNIPIRWLC 418
                +++ C      + AL+   C AG    A+ +  E +      +  ++   +  L 
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
               + KA +L   M+    +    +Y+  + G C+L   E+A ++   ++   ++ D I
Sbjct: 589 RGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYI 647

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           +YS ++   C+   + EA++++  M   G    + +++ L++G C+  +++KA  LR
Sbjct: 648 TYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELR 704



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 1/148 (0%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           KE + + + PN  T    L+ L     +E A+ Q      KG    + ++ I+I+G    
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAV-QLHHAMLKGFLATTVSYNILIRGFCRL 624

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +++++  +L  M D  I  +   Y+ II   C+ + L+EAI+L+  M    L PD L Y
Sbjct: 625 GKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAY 684

Query: 311 EELINCLCENLRLDDANDILEDMIVIGL 338
             L++  C    L+ A ++ ++MI  G+
Sbjct: 685 SFLVHGCCIAGELEKAFELRDEMIRRGM 712


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 146/574 (25%), Positives = 254/574 (44%), Gaps = 45/574 (7%)

Query: 80  LKIFKWVSIQKRFQHTADTYCKMIL----------KLGLAGNVEEMEGLCQNMVKERYPN 129
           L+ + WV  +K   H+ +  C +I            L L GN+  + GL    V E   N
Sbjct: 100 LEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEALNN 159

Query: 130 V-------REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
                        +LV +        GA  V+  +   G  +++  +N  L  +++    
Sbjct: 160 SYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNE- 218

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
              F  VYKEMV  G + NV+T N ++  L +  +++ AL  F R+ K G  PN  TF +
Sbjct: 219 IHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNM 278

Query: 243 VIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           ++ G      +D ++ ++ +M  +    I+     Y  +I   C+   +  A  L   M 
Sbjct: 279 MVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMM 338

Query: 300 ALDLMPDELTYEELI------NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
            +D+ P+  TY  +I       CL E LRL D      +M+  GL P   V+  I+  L 
Sbjct: 339 KIDIEPNVRTYATMIEGYSRAGCLEEALRLCD------EMVERGLLPNSVVYNSIMHWLY 392

Query: 354 EVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRKIADCD 408
             G  D +     D    +        + L    C  G    A K + + + +  I D  
Sbjct: 393 MEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAF 452

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S NI I +LC++     A +LL RM V  +VPD  T+   + G CK  N E A++V+ ++
Sbjct: 453 SHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKM 512

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                  + + Y+ ++ GLC+   +  A  +   + + G  + + ++N LI G     K 
Sbjct: 513 VKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGKF 571

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAY 585
           DKA +L +L  ++G   +++TY  ++  L K   +Q AK+L+ +   M++ G   D   Y
Sbjct: 572 DKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTM---MVLWGVLPDNITY 628

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             L+ ++++    ++     + MV  G+VPD+ T
Sbjct: 629 RTLVININKNCSAEEVIELHDYMVLKGVVPDKLT 662



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 4/307 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EMV+ G++PN    N ++  L+    ++ A   F  M  K    +  T  I+ +GL  N 
Sbjct: 371 EMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNG 430

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            +  ++  L ++ +  +  +   +  +I  LC+ N    A +L   M    L+PD +T+ 
Sbjct: 431 YITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFG 490

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKC 369
            LI+  C+   ++ A  + + M+     P   V+  I+ GLC+ G  D + + ++   + 
Sbjct: 491 TLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRM 550

Query: 370 GYV-TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           G V T  +N L+    N GKF  A  +   M +  I A   ++N  I++LC+   +++A 
Sbjct: 551 GLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAK 610

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           EL+  MV+  V+PD  TY   V+   K C+ E+ + +   +  + +V D ++Y  +V  L
Sbjct: 611 ELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPL 670

Query: 488 CQVEKIT 494
            Q E  T
Sbjct: 671 LQEESAT 677



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 177/413 (42%), Gaps = 39/413 (9%)

Query: 313 LINCLCENLRLDDANDILEDMIVI-GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
           +I+ L  + R DDA  ++ +++ + GL+P                   E +  L +  G 
Sbjct: 122 VIHVLVNSRRYDDALSLMGNLMTVNGLSPL------------------EVLEALNNSYGI 163

Query: 372 VTSPH---NALLECCCNAGKFFLAKCILEKMADRKIADC----DSWNIPIRWLCENEEIR 424
             S H   +AL+  C   G    A  +++K+   +I  C     +WN  +  L +  EI 
Sbjct: 164 CESNHAVFDALVRACTQIGATVGACEVIKKL---QIEGCWVTIHAWNNFLSHLIKVNEIH 220

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           + + +   MV    + +  T++  V   CK C  ++AL VF ++    +  + ++++ +V
Sbjct: 221 RFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMV 280

Query: 485 EGLCQVE------KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +G C++       K+   +E+   MS      +S ++N LI G C +  +  A  LR+  
Sbjct: 281 DGACKMGDMDLALKLVRKMEI---MSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEM 337

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
                     TY  ++ G  +    ++ L +  +M+  G   +   Y  ++  +  +  +
Sbjct: 338 MKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDV 397

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
              +L F  M    +  D+ T   L  GL     +      +N+++ ++ + D+  +NIL
Sbjct: 398 DGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNIL 457

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFD 710
           IN L K    + A  LL  M  +G VPD  T G L+     E  I+S    +D
Sbjct: 458 INFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYD 510


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 202/475 (42%), Gaps = 41/475 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V   +  +   PNV     L+    E   +E AL  + +M      P  +   +V+ GL+
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R D    + G+M   G    +  Y  +I   CR+    +A RLF  M    + P  +
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  LI  LC   R+ +A  +   M   G+ P    +  ++ G C++    +++   +  
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ-- 287

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                                       E + D  + +  ++ I I  LC+ +E+  A +
Sbjct: 288 ----------------------------EMLGDGLLPNVVTFGILIDGLCKTDEMVSARK 319

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
            L  M    VVP+   Y+  + G CK  N  +AL +  ++    ++ D  +YS L++GLC
Sbjct: 320 FLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLC 379

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
            V+++ EA  +   M K G   ++ ++N LI G C    ++KAI + S     G      
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII 439

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T++ ++ G  K  + +  + +  +M+++G   DV AY  LI    +    K+       M
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 609 VKAGLVPDRETMLSLLHGL------ADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
            +AGL P+  T+  L+ GL      +D  +L L  +G +   S +  LD S+Y +
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQM 554



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 190/408 (46%), Gaps = 9/408 (2%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K + +VF V++ A  E      + ++VY +M    ++P +   N +L+ L +  R ++  
Sbjct: 123 KFTPNVFGVLIIAFSEMGL-VEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             +  M  +G  PN  T+  +I G         +  +  EM +  I   +  YT +I  L
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C E+++ EA  +F+ MR   ++P+  TY  +++  C+   +  A ++ ++M+  GL P  
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             F  ++ GLC+  +   +  FL D   +   P    +N L++  C AG    A  +  +
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           +   +I  D  +++I I+ LC  + + +A  LL  M     +P+  TY+  + G CK  N
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            E A+ V  Q++ + +  + I++S L++G C+  K+  A+ ++  M   G      ++  
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           LI G        +A RL      +G      T + ++ GL K  R  D
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 8/384 (2%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N+VL  +V++ R F     VY +MV  G  PNV T   L++          A   F  M 
Sbjct: 162 NMVLDGLVKKGR-FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           +K   P    + I+I+GL   SR+ ++ S+   M + G+   L  Y  ++   C+   ++
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A+ L++ M    L+P+ +T+  LI+ LC+   +  A   L DM   G+ P   V+  ++
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-I 404
            G C+ G   E+++   +   +   P    ++ L++  C   +   A  +L++M  +  +
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  ++N  I   C+   + KA E+  +M    + P+  T+S  + G CK    E A+ +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           + ++  + L+ D ++Y+ L++G  +     EA  +   M + G   +  + + LI GLC 
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTS 548
             ++  AI+L      +GT  T S
Sbjct: 521 DGRISDAIKL--FLAKTGTDTTGS 542



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 178/378 (47%), Gaps = 38/378 (10%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A R+   M       +V ++ +++  +  E R  ++   +++ M  +G++PN+ T N ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESR-ISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +   +   ++ AL+ ++ M   G  PN  TF I+I GL     +  +   L +M   G+ 
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  Y C+I   C+   L EA+ L   +   +++PD  TY  LI  LC   R+++A+ +
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
           L++M   G  P    +  ++ G C+ G  ++++                  E C      
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI------------------EVC------ 426

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
                   +M ++ I  +  +++  I   C+  ++  A  L   MV+  ++PD   Y+A 
Sbjct: 427 -------SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  K  N ++A R+ +++    L  +  + S L++GLC+  +I++A+++F  ++K G 
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGT 537

Query: 509 SLSSSSFNIL---IYGLC 523
             + S  N L   +Y +C
Sbjct: 538 DTTGSKTNELDRSLYQMC 555



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 160/352 (45%), Gaps = 5/352 (1%)

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GL + G+FD       D      SP    +  L++ CC  G F  A  + ++M ++K
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I      + I IR LC    I +A  +   M  S ++P+  TY+  + G CK+ + + AL
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +++++    L+ + +++  L++GLC+ +++  A +    M+  G   +   +N LI G 
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C    + +A+ L S            TY+ ++ GL  + R ++   +L +M  +G   + 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             Y  LI    ++  ++      + M + G+ P+  T  +L+ G     ++        +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +V    + D   Y  LI+G +K+G T +A  L   M   G  P+  T   L+
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 135/279 (48%), Gaps = 10/279 (3%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLV 155
           D YCK+        +V++   L Q M+ +   PNV    I L+        +  A + L+
Sbjct: 271 DGYCKI-------AHVKKALELYQEMLGDGLLPNVVTFGI-LIDGLCKTDEMVSARKFLI 322

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           +M S G   ++ V+N ++    +     ++ + ++ E+ K  I+P+V T + L++ L   
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAG-NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           +R+E A    + M KKG  PN+ T+  +I G      ++ ++ +  +M + GI+  +  +
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           + +I   C+  K+E A+ L+  M    L+PD + Y  LI+   ++    +A  + ++M  
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
            GL P       ++ GLC+ G+  +++     K G  T+
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTT 540



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 120/284 (42%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N+ +  L +       +++ G MV     P+  TY   + G C+  ++  A R+F ++  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           + +    + Y+ L+ GLC   +I+EA  +F  M  +G   +  ++N ++ G C +  V K
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ L       G      T+  ++ GL K          L  M   G   ++  Y  LI 
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              +   L +     + + K  ++PD  T   L+ GL    ++      + ++     + 
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           ++  YN LI+G  KEG   +A  +   M  KG  P+  T   L+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 201/474 (42%), Gaps = 30/474 (6%)

Query: 82  IFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY---PNVREALIS-- 136
            FKWV       H+  +   MI  L      +  + L + +    Y   P+V  A++   
Sbjct: 61  FFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIH 120

Query: 137 ------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
                       LV  + N      A++V  +M   GFK  +    V+L ++ + +    
Sbjct: 121 DDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR--LT 178

Query: 185 DFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           + V+ VYK+MV+ G+VPN+   N L+    ++  +E A      M  +   P+  T+  +
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I          +++ I   M   G+  ++  Y  +I   CRE ++ EA+RLF+ +     
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREING--A 296

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+ +TY  LI+  C    L++A  + E M V GL P    +  I+R LCE GK  ++  
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356

Query: 364 FLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
            L +       P     N L+   C  G    A  + +KM +  +  D  ++   I   C
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +  E+  A E L  M+ +   P  +TYS  V       N E  +R+  ++S + L +D  
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDIS 476

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            Y  L+  LC+++KI  A  +F  M   G    S  +  L Y      K  KAI
Sbjct: 477 VYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYF---KAGKAI 527



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 169/431 (39%), Gaps = 45/431 (10%)

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++AI++F+ MR     P       L+N L +    +    + + M+ +G+ P   +F   
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF--- 200

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
                                       N L+  CC +G    A+ +L +M  R I  D 
Sbjct: 201 ----------------------------NVLIHACCKSGDVEKAEQLLNEMESRFIFPDL 232

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++N  I   C+     +A  +  RM    V PD  TY++ + G C+     +ALR+FR+
Sbjct: 233 FTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE 292

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++  +   + ++Y+ L++G C+V  + EA+ +   M   G      ++N ++  LC   K
Sbjct: 293 INGATP--NHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK 350

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  A RL +            T   ++    K+      + V  +ML  G   D   +  
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKA 410

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI    + +++     F   M+ AG  P   T   L+    D      V    ++L    
Sbjct: 411 LIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKG 470

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL-----------VGS 696
             +D S+Y  LI  L K      A  +  LM GKG   D+  +  L             S
Sbjct: 471 LFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAAS 530

Query: 697 SVGEEIDSRRF 707
            + +E+D RR 
Sbjct: 531 DMLDEMDKRRL 541



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 39/286 (13%)

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
           +++  +MV   VVP+   ++  +   CK  + E A ++  ++ ++ +  D  +Y+ L+  
Sbjct: 182 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL 241

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C+     EA+ +   M + G S    ++N LIYG C   ++ +A+RL      +G +  
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRL--FREINGATPN 299

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TYT ++ G  ++   ++ L +   M VEG    V  Y  +++ + E+ K+KD     N
Sbjct: 300 HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 359

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M +  + PD  T                                    N LIN   K G
Sbjct: 360 EMSERKVEPDNVTC-----------------------------------NTLINAYCKIG 384

Query: 667 LTSQASYLLDLMLGKGWVPDA-TTHGLLVGSSVGEEIDS-RRFAFD 710
               A  +   ML  G  PD  T   L+ G     E+DS + F F+
Sbjct: 385 DMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFE 430



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 4/225 (1%)

Query: 146 RVNG---AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
           RVN    A+R+   M   G    V  +N +L  + EE +   D   +  EM +  + P+ 
Sbjct: 312 RVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK-IKDANRLLNEMSERKVEPDN 370

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T N L+    +   + SA+   ++M + G  P+  TF+ +I G      VD +   L E
Sbjct: 371 VTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFE 430

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M D G     S Y+ ++     ++  E  IRL   +    L  D   Y  LI  LC+  +
Sbjct: 431 MLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDK 490

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           ++ A  I   M   G+     V+  +     + GK   + + L++
Sbjct: 491 IESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 72/145 (49%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V K+M++AG+ P+  T   L+    + + ++SA +    M   G  P+  T+  ++    
Sbjct: 392 VKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYY 451

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                +  + +  E+   G+ +++S Y  +I  LC+ +K+E A R+F +M+   +  D +
Sbjct: 452 DQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSV 511

Query: 309 TYEELINCLCENLRLDDANDILEDM 333
            Y  L     +  +   A+D+L++M
Sbjct: 512 VYTSLAYAYFKAGKAIAASDMLDEM 536


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 147/620 (23%), Positives = 268/620 (43%), Gaps = 46/620 (7%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV----EEMEGLCQ 120
           HL R+  N ND +  + I K +  +  F+   D + +M  + G+  N       +EGLC 
Sbjct: 217 HLKRLGLNPNDYTYGIFI-KALCRKGNFEEAVDVFREM-EEAGVNPNAVTCSTYIEGLCS 274

Query: 121 N------------MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           +            +    +P    A  +++  F +  ++  A  V ++M + G      +
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +  ++ A  +        V ++ +MV  GI  N   ++ +L+ L E       +DQF+  
Sbjct: 335 YGALIHAYCKAG-NLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEF 393

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
              G   +   + IV+  L    +V+++V +L EM    + L++  YT +I   C + KL
Sbjct: 394 RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKL 453

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A  +F+ M+   + PD +TY  L+     N    +A ++L+ +   GL P       I
Sbjct: 454 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 513

Query: 349 VRGLCEVGKFDES---VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI- 404
           + GLC  GK  E+   +N LEDKC      ++A+++  C A     A  +  +++ + I 
Sbjct: 514 IEGLCMAGKVKEAEAFLNTLEDKC---LENYSAMVDGYCKANFTRKAYELFSRLSKQGIL 570

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
               S    +  LC   E  KA  LL RM+   V P+   Y   +   C+  + + A  V
Sbjct: 571 VKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLV 630

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +  + +  D I+Y+ ++ G C+V  + EA ++F  M + G      ++ +++ G   
Sbjct: 631 FDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDG--- 687

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             KV+  +  RSL +S G+                 +   D     ++M   G   DV  
Sbjct: 688 HSKVNLKM-ARSLQFSKGSE----------------EEKMDASPFWSEMKEMGIKPDVVC 730

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y +LI S  + N L+D    ++ M+  GL PD  T  +LL        +    + +N++ 
Sbjct: 731 YTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMS 790

Query: 645 SDSEVLDSSMYNILINGLWK 664
                 DS   ++L  G+ K
Sbjct: 791 FKGIEPDSRAMSVLHRGILK 810



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 152/617 (24%), Positives = 251/617 (40%), Gaps = 64/617 (10%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF-VFVYKEMVK 195
           LV ++V     + A+  L      GF   +   N ++  ++E   G  D  V +Y+ + +
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEH--GKIDMAVAIYRHLKR 220

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ PN  T    ++ L      E A+D FR M + G  PN+ T    I+GL ++ R D 
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
               L  +      ++   YT +I   C E KL+EA  +F  M    + PD   Y  LI+
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 316 CLCENLRLDDANDILEDMIVIGLTPT-----------------------------DDVFV 346
             C+   L  A  +  DM+  G+                                  +F+
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFL 400

Query: 347 D------IVRGLCEVGKFDESVNFLEDKCGYVTS----PHNALLECCCNAGKFFLAKCIL 396
           D      +V  LC++GK +E+V  L +  G   S     +  L+   C  GK   AK + 
Sbjct: 401 DEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 460

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E+M +R I  D  ++NI +     N   ++A ELL  +    + P+ AT++  + G C  
Sbjct: 461 EEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMA 520

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A      +  + L     +YS +V+G C+     +A E+F  +SK G  +   S 
Sbjct: 521 GKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSC 576

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             L+  LC+  + DKA+ L     +         Y K++    +    K   +V   ++ 
Sbjct: 577 FKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE 636

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   DV  Y ++I      N L++    FN M + G+ PD  T   +L G +    L +
Sbjct: 637 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK-VNLKM 695

Query: 636 VSSGINKLVSDSEVLDSSM----------------YNILINGLWKEGLTSQASYLLDLML 679
             S      S+ E +D+S                 Y +LI+   K      A  L D M+
Sbjct: 696 ARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMI 755

Query: 680 GKGWVPDATTHGLLVGS 696
            +G  PD  T+  L+ S
Sbjct: 756 ARGLQPDIVTYTALLSS 772



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/417 (21%), Positives = 168/417 (40%), Gaps = 53/417 (12%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFN---VVLGAIVEEKRGFADFVFVYKEMVKAGIVPNV 202
           +V  A+ +L  M   G ++S+DV +   ++ G  ++ K    D   +++EM + GI P++
Sbjct: 417 KVEEAVELLNEMK--GRRMSLDVVHYTTLIAGYCLQGK--LVDAKNMFEEMKERGIEPDI 472

Query: 203 DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
            T N L+         + AL+    +  +G  PNS T   +I+GL    +V ++ + L  
Sbjct: 473 VTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNT 532

Query: 263 MFD-------------------------------LGIQLELSFYTCIIPMLCRENKLEEA 291
           + D                                GI ++      ++  LC E + ++A
Sbjct: 533 LEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKA 592

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           + L + M ALD+ P+++ Y +LI   C +  +  A  + + ++  G+TP    +  ++ G
Sbjct: 593 LILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMING 652

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
            C V    E+ +   D       P                   +L+  +   +    S  
Sbjct: 653 YCRVNCLREARDIFNDMKERGIKP------------DVITYTVVLDGHSKVNLKMARSLQ 700

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
                    EE   A      M    + PD   Y+  +   CK  N +DA+ ++ ++ A+
Sbjct: 701 FS---KGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            L  D ++Y+ L+   C    +  A+ +   MS  G    S + ++L  G+   RKV
Sbjct: 758 GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKV 814


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 110/502 (21%), Positives = 224/502 (44%), Gaps = 26/502 (5%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++++M   G++P+  T +  +  L +  R + A + F+ M  KG  P+  ++ I++ G  
Sbjct: 324 MFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYA 383

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              R  D  ++   M D GI         +I    +   ++EA+ +F  M+   + P+ +
Sbjct: 384 TEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVV 443

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI+  C   RL DA +    MI IG+ P   V+  ++ G C  G   ++  F+ + 
Sbjct: 444 TYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 369 CGYVTSPHN-----ALLECCCNAGKFFLAKCILE---KMADRKIADCDSWNIPIRWLCEN 420
                   N     +++   C  G+   A+ +      + DR      ++N  I   C  
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPT--IVTFNSLIDGYCLV 561

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            ++ KA+ +L  MV   + PD  T +  V G CK    +D L +FR++  + +   +++Y
Sbjct: 562 GKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 621

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + +++GL +  + + A ++F  M  +G ++   ++ IL+ GLC     D+AI L     +
Sbjct: 622 NIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 681

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
               +  +    ++  L K++R ++   + A +   G   +V  Y ++I+++ ++  +++
Sbjct: 682 MDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEE 741

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M K+G  P                   L++  I  L+   +++ +  Y   ++
Sbjct: 742 ADTMFSSMEKSGCAPSSR----------------LLNDIIRMLLQKGDIVKAGYYMSKVD 785

Query: 661 GLWKEGLTSQASYLLDLMLGKG 682
           G       S  S L+ L   KG
Sbjct: 786 GTIISLEASTTSLLMSLFSSKG 807



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 239/535 (44%), Gaps = 11/535 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAG--IVPNVDTLNYLLEVLFETNRIESALDQFR 226
           +N V+ ++  + R   + + + + M K G    P+V + N ++   F+   +  A + F 
Sbjct: 198 YNTVIKSLCGDSRS-QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFN 256

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M +KG  P+  T+  ++  L     +D +  +L +M D G++ +   Y  II       
Sbjct: 257 EMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSG 316

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
             +E+ ++F+ M +  L+PD +T+   ++ LC++ R  DA +I + M   G  P    + 
Sbjct: 317 HWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYS 376

Query: 347 DIVRGLCEVGKFDESVNF---LEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMAD 401
            ++ G    G+F +  N    + DK G V++ H  N L+      G    A  +  +M  
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADK-GIVSNCHCINILISAHAKRGMMDEAMLVFTEMQG 435

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           + +  +  +++  I   C    +  A E   +M+   + P+ A Y + + G C   +   
Sbjct: 436 QGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVK 495

Query: 461 ALRVFRQVSAQSLVLDSISY-SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           A     ++ ++ L   +I + S ++  LC   ++ +A +VF  +   G   +  +FN LI
Sbjct: 496 AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLI 555

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C++ K++KA  +     S G      T   ++ G  K  +  D L++  +ML +   
Sbjct: 556 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVK 615

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
                Y I++  +    +       F+ M+ +G   D +T   LL GL          + 
Sbjct: 616 PTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 675

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +KL +     D ++ N +IN L+K     +A+ L   +   G VP+ +T+G+++
Sbjct: 676 FHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 730



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 121/545 (22%), Positives = 232/545 (42%), Gaps = 20/545 (3%)

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           L+V  + +++      +R      FV + +++AG+          L+ L    R + A+D
Sbjct: 122 LTVRTYGILMDCCCRARRPDLGPAFVAR-LLRAGLKTGTIQATTFLKCLCHAKRTDEAVD 180

Query: 224 QF-RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE---LSFYTCII 279
               RM +  C P++ ++  VIK L  +SR  +++ ++  M   G +     +SF T +I
Sbjct: 181 VLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT-VI 239

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
               ++ ++ +A  LF  M    ++PD  TY  +++ LC+   +D A  +L  M+  G+ 
Sbjct: 240 HGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE 299

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           P    +  I+ G    G + ES             P     ++ +   C  G+   A+ I
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 396 LEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            + M  +  + D  S++I +              L   M    +V +C   +  +    K
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               ++A+ VF ++  Q +  + ++YS L+   C++ ++ +A+E F  M   G   +++ 
Sbjct: 420 RGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAV 479

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST-YTKIMLGLVKLQRAKDLLVVLAQM 573
           ++ LI+G C+   + KA    S   S G        ++ I+  L    R  D   V   +
Sbjct: 480 YHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ- 632
           +  G    +  +  LI       K++      + MV  G+ PD  T  +L+ G     + 
Sbjct: 540 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKI 599

Query: 633 ---LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
              L L    ++K V  + V     YNI+++GL + G TS A  +   M+  G   D  T
Sbjct: 600 DDGLILFREMLHKKVKPTTV----TYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDT 655

Query: 690 HGLLV 694
           + +L+
Sbjct: 656 YKILL 660



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/531 (21%), Positives = 224/531 (42%), Gaps = 21/531 (3%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFE-------TNRIESALDQFRRMHKKGCCP-- 235
           D   ++ E+++ G   +  +LN  L  L         +N     L  F R+ ++   P  
Sbjct: 60  DAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRV 119

Query: 236 ---NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
                RT+ I++       R D   + +  +   G++      T  +  LC   + +EA+
Sbjct: 120 APLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAV 179

Query: 293 R-LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIV 349
             L   M  L  +PD ++Y  +I  LC + R  +A D+++ M   G   + DV  F  ++
Sbjct: 180 DVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 239

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI- 404
            G  + G+  ++ N   +       P    +N++++  C A     A+ +L +M D+ + 
Sbjct: 240 HGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE 299

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++N  I     +   +++ ++  +M    ++PD  T+S+F+   CK    +DA  +
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F+ ++ +  + D +SYS L+ G     +  +   +F  M+  G   +    NILI     
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              +D+A+ + +     G      TY+ ++    ++ R  D +   +QM+  G   +   
Sbjct: 420 RGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAV 479

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGL-VPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           Y  LI        L     F + M+  GL  P+     S++H L    ++       N +
Sbjct: 480 YHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +   +      +N LI+G    G   +A  +LD M+  G  PD  T+  LV
Sbjct: 540 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 1/229 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           ++  A  VL  M S G +  V   N ++    +  +   D + +++EM+   + P   T 
Sbjct: 563 KMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK-IDDGLILFREMLHKKVKPTTVTY 621

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N +L+ L    R  +A   F  M   G   +  T++I++KGL  N   D+++++  ++  
Sbjct: 622 NIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 681

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           +  + +++    +I  L +  + EEA  LF  +    L+P+  TY  +I  L +   +++
Sbjct: 682 MDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEE 741

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           A+ +   M   G  P+  +  DI+R L + G   ++  ++    G + S
Sbjct: 742 ADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIIS 790


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 176/356 (49%), Gaps = 5/356 (1%)

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           R  +K C P+  T+ I+I+   A S V  ++ +L EM   G + ++  Y  ++  +C+E 
Sbjct: 6   RQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEG 65

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +L+EAI+    M +    P+ +T+  ++  +C   R  DA  +L +M+  G +P+   F 
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++  LC  G    +++ LE    +  +P    +N LL   C   K   A   LE M  R
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185

Query: 403 K-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
               D  ++N  +  LC++ ++  A ELL ++      P   TY+  + G  K+   + A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           + +  ++  + L  D I+YS L+ GL +  K+ EA++ F  +   G   ++ ++N +++G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LC  ++ D+AI   +   S G   T  +YT ++ G+     AK+ L +L ++   G
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 40/395 (10%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +TY  LI   C    +  A  +L++M   G  P    +  +V G+C+ G+ DE++ F
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
           L     Y + P    HN +L   C+ G++  A+ +L +M  +  +    ++NI I +LC 
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC- 132

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
               RK   LLGR                            A+ +  ++       +S+S
Sbjct: 133 ----RKG--LLGR----------------------------AIDILEKMPTHGCTPNSLS 158

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ G C+ +K+  A++    M   GC     ++N ++  LC   KVD A+ L +   
Sbjct: 159 YNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLS 218

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S G S    TY  ++ GL K+ +    + +L +M  +G   DV  Y  LI  +S + K++
Sbjct: 219 SKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVE 278

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +   FF+ +   G+ P+  T  S++ GL    Q       +  ++S         Y ILI
Sbjct: 279 EAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILI 338

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G+  EGL  +A  LL+ +  +G V  ++   ++V
Sbjct: 339 EGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 177/405 (43%), Gaps = 32/405 (7%)

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           ME L + + KE YP+V    I L+ +      V  AM++L  M S G K  V  +NV++ 
Sbjct: 1   MEVLDRQLEKECYPDVITYTI-LIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN 59

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
            + +E R   + +     M   G  PNV T N +L  +  T R   A      M +KGC 
Sbjct: 60  GMCKEGR-LDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCS 118

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P+  TF I+I  L     +  ++ IL +M   G       Y  ++   C+E K++ AI+ 
Sbjct: 119 PSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQY 178

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
            ++M +    PD +TY  ++  LC++ ++D A ++L  +   G +P    +  ++ GL +
Sbjct: 179 LEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 238

Query: 355 VGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI 414
           VGK D++V  L +  G    P                              D  +++  I
Sbjct: 239 VGKTDQAVELLHEMRGKGLKP------------------------------DVITYSSLI 268

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             L    ++ +A +    +    V P+  TY++ + G CK    + A+     + ++   
Sbjct: 269 AGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCK 328

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
              +SY+ L+EG+       EA+E+   +   G    SS+  +++
Sbjct: 329 PTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 150/331 (45%), Gaps = 1/331 (0%)

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
           LE +C      +  L+E  C       A  +L++M  R    D  ++N+ +  +C+   +
Sbjct: 8   LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL 67

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A + L  M      P+  T++  +   C    + DA ++  ++  +      ++++ L
Sbjct: 68  DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNIL 127

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +  LC+   +  A+++   M  +GC+ +S S+N L++G C  +K+D+AI+   +  S G 
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                TY  ++  L K  +    + +L Q+  +GC+  +  Y  +I  +S+  K      
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
             + M   GL PD  T  SL+ GL+   ++       + +       ++  YN ++ GL 
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLC 307

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           K   T +A   L  M+ KG  P   ++ +L+
Sbjct: 308 KAQQTDRAIDFLAYMISKGCKPTEVSYTILI 338



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/214 (21%), Positives = 97/214 (45%), Gaps = 1/214 (0%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A++ L  M S G    +  +N +L A+ ++ +  A  V +  ++   
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAA-VELLNQLSSK 220

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P + T N +++ L +  + + A++    M  KG  P+  T+  +I GL    +V+++
Sbjct: 221 GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +    ++   G++     Y  I+  LC+  + + AI     M +    P E++Y  LI  
Sbjct: 281 IKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           +       +A ++L ++   G+         +VR
Sbjct: 341 IANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 121/545 (22%), Positives = 248/545 (45%), Gaps = 18/545 (3%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           ++ + +VF+ +L  ++   R       V + M++ G+        +L+       ++ SA
Sbjct: 122 YRHAPEVFDEML-VLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSA 180

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +   + M K GC P+     + +  L+   R+D ++     M  +G+  ++  Y C+I  
Sbjct: 181 MRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKG 240

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC   ++ +A+ +   M     +PD+++Y  +++ LC+  R+ D  ++LE M   G+ P 
Sbjct: 241 LCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPD 300

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLA 392
              +  ++ GL + G  DE+++FL          D+ GY  + H+      C  G+   A
Sbjct: 301 QVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSF-----CLNGRMAEA 355

Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
           K I+ +M  +    D  +++  +   C   E+ +A +++  M  +   P+  T++A + G
Sbjct: 356 KEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNG 415

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK+    +A  +  +   +     +I+YS ++ G  +  K+ E+ +V   M + G   +
Sbjct: 416 LCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPT 475

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
           +   N+LI+ LC  RK   A        S G       +T ++ G  +    +  L +L 
Sbjct: 476 TVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLD 535

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            M +     DV  Y +++ ++  + K+K+       M+  GL P   T  +++H   +  
Sbjct: 536 DMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKG 595

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            +  + + ++K+++      SS YN +I  L   G  S+A+ LL  +L      DA T  
Sbjct: 596 AVEDLLNLLDKMLAKEGF--SSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCH 653

Query: 692 LLVGS 696
           +L+ S
Sbjct: 654 ILMDS 658



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 135/652 (20%), Positives = 263/652 (40%), Gaps = 45/652 (6%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSA--LKIFKWVSIQKRFQHTADTY 99
           ++   +   EA+++ L   ++P  +  VL       +    + F+W   Q +++H  + +
Sbjct: 70  LRDSWSAKLEAQLRHLLRAMTPSQVRAVLRAQAQRDARAAFEFFRWADRQWKYRHAPEVF 129

Query: 100 CKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS 159
            +M++ L      +    + + M++   P        L+ S+    ++  AMRVL  M  
Sbjct: 130 DEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQK 189

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
            G    + + N+ +  +V   R      F  + M + G+ P+V T N L++ L    RI 
Sbjct: 190 DGCAPDICICNMAVNVLVVAGRIDKALEFA-ERMRRVGVDPDVVTYNCLIKGLCGARRIV 248

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            AL+    M + GC P+  ++  V+  L    RV D  ++L  M D GI  +   Y  +I
Sbjct: 249 DALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLI 308

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             L +    +EA+   +         DE+ Y   ++  C N R+ +A +I+ +MI  G  
Sbjct: 309 HGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCR 368

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
           P    +  +V G C +G+ D++   +    ++ C   T  H ALL   C  GK       
Sbjct: 369 PDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGK------- 421

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                                        +A+ELL +       P   TYS  + G  + 
Sbjct: 422 ---------------------------SSEAWELLNKSEEEWWTPSAITYSVVMHGFRRE 454

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              +++  V  Q+  +     ++  + L+  LC   K  +A +        GC ++  +F
Sbjct: 455 GKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNF 514

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             +I+G      ++ A+ L    Y +       TYT ++  L +  + K+   ++ +ML 
Sbjct: 515 TTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLN 574

Query: 576 EGCALDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            G       Y  +I    E+  ++D   L   ++ K G       ++  L      S+  
Sbjct: 575 RGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSE-- 632

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
             ++ ++K++  +   D+   +IL++     GL  Q+  +   M  +  +PD
Sbjct: 633 -ANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPD 683



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 5/319 (1%)

Query: 386 AGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
           AGK   A  +L+ M  D    D    N+ +  L     I KA E   RM    V PD  T
Sbjct: 174 AGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVT 233

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  + G C      DAL +   +     + D ISY  ++  LC+ +++ +   +   MS
Sbjct: 234 YNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMS 293

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST--YTKIMLGLVKLQR 562
             G      ++N+LI+GL      D+A+    L  S G  +      Y+  +       R
Sbjct: 294 DAGIFPDQVTYNMLIHGLAKHGHADEALSF--LRESEGKRFRVDEVGYSATVHSFCLNGR 351

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
             +   ++ +M+ +GC  DV  Y  ++       +L         M K G  P+  T  +
Sbjct: 352 MAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTA 411

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
           LL+GL    +       +NK   +     +  Y+++++G  +EG   ++  ++  ML KG
Sbjct: 412 LLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKG 471

Query: 683 WVPDATTHGLLVGSSVGEE 701
           + P      LL+ +   E 
Sbjct: 472 FFPTTVEINLLIHALCNER 490



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 11/222 (4%)

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           F+ ++  L   R  D A R+  L    G    T  +  +ML   +  + +  + VL  M 
Sbjct: 129 FDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQ 188

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +GCA D+    + +  +    ++     F   M + G+ PD  T   L+ GL    ++ 
Sbjct: 189 KDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIV 248

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                I+ ++ +  + D   Y  +++ L KE   +    LL+ M   G  PD  T+ +L+
Sbjct: 249 DALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLI 308

Query: 695 GS-----------SVGEEIDSRRFAFDSSSFPDSVSDILAEG 725
                        S   E + +RF  D   +  +V      G
Sbjct: 309 HGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNG 350


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 187/430 (43%), Gaps = 36/430 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           +++ G +P+V T   L++ L   +RI  A   F RM K GC PN  T+  +IKGL A   
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGN 211

Query: 253 VDDSVSILGEMFD------LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           ++ ++    EM +         +  +  Y+ II  LC+    EEAI LF  M    + P+
Sbjct: 212 INIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPN 271

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +T+  LI+ LC+  ++  A  +LE MI IG+ P    +  +++G C VG  + +     
Sbjct: 272 VVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL-- 329

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
               +V+ P                              D  S+N+ I   C+  ++ +A
Sbjct: 330 ----FVSMPSKGYE------------------------PDVISYNMLINGYCKTLKVEEA 361

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +L   M+   + PD  T    +         +DA  +FR +   ++  D       ++G
Sbjct: 362 MKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDG 421

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+   I EA+++F  +      L   +F  LI GLC   K++ A  L    Y  G    
Sbjct: 422 LCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPD 481

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
              Y+ ++ G  K  +     ++  +M   GC+ D+  Y IL++   E NKL+      +
Sbjct: 482 AMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLH 541

Query: 607 VMVKAGLVPD 616
            M++  + PD
Sbjct: 542 RMIEKDVWPD 551



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/497 (22%), Positives = 216/497 (43%), Gaps = 38/497 (7%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           + N LL  L +          +++MH  G  P+  T  I+I  L   +R+++ ++ +  +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE---- 319
              G   ++  +T +I  LC E+++ EA +LF  M+ L   P+ +TY  LI  LC     
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 320 NLRLDDANDILEDM--IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           N+ L    ++L D    V    P    +  I+ GLC+VG ++E++               
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAI--------------- 257

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
                           C+  +M D+ +  +  ++++ I  LC+  ++ KA +LL  M+  
Sbjct: 258 ----------------CLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQI 301

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            +VP+  TY++ + G C + +   A  +F  + ++    D ISY+ L+ G C+  K+ EA
Sbjct: 302 GIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEA 361

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           +++F  M   G      +  +L+  L +  KVD A  L  +                + G
Sbjct: 362 MKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDG 421

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K     + + +  ++      LD+E +  LI  + +  KL+     F  + + G+ PD
Sbjct: 422 LCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPD 481

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                S++HG     Q+   +    K+  +    D   Y+IL+ G ++     +   LL 
Sbjct: 482 AMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLH 541

Query: 677 LMLGKGWVPDATTHGLL 693
            M+ K   PD   + ++
Sbjct: 542 RMIEKDVWPDDGIYAIV 558



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/481 (22%), Positives = 201/481 (41%), Gaps = 39/481 (8%)

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           SV+   + FDL ++   SF   ++  L +     +   L+K M    L PD LT   LIN
Sbjct: 76  SVTQAHQFFDLMMRSIFSFNR-LLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILIN 134

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
           CLC   R+++    +  ++  G  P    F  +++GLC   +  E+            +P
Sbjct: 135 CLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTP 194

Query: 376 ----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
               +  L++  C  G                       NI ++W  E       Y    
Sbjct: 195 NVVTYGTLIKGLCALGNI---------------------NIALKWHQEMLNDTSPY---- 229

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
              V +  P+  +YS  + G CK+ N+E+A+ +F ++  Q +  + +++S L++ LC+  
Sbjct: 230 ---VFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEG 286

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           ++ +A ++   M + G   +  ++  LI G C++  ++ A  L     S G      +Y 
Sbjct: 287 QVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYN 346

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K  + ++ + +  +ML  G   DV+   +L++++    K+ D    F V+   
Sbjct: 347 MLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPY 406

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +  D       L GL     +       N+L S +  LD   +  LI+GL K G    A
Sbjct: 407 AMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETA 466

Query: 672 SYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAF----DSSSFPDSVS-DILAEG 725
             L + +  +G  PDA  +  ++ G     ++D     F    ++   PD ++  IL  G
Sbjct: 467 WELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG 526

Query: 726 L 726
            
Sbjct: 527 F 527



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 91/435 (20%), Positives = 177/435 (40%), Gaps = 82/435 (18%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+N  +  +  +   G+   V  F  ++  +  E R   +   ++  M K G  PNV T 
Sbjct: 141 RINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHR-IIEATKLFMRMQKLGCTPNVVTY 199

Query: 206 NYLLEVLFETNRIESALDQFRRM------HKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
             L++ L     I  AL   + M      +   C PN  ++ I+I GL      ++++ +
Sbjct: 200 GTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICL 259

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP-------------- 305
             EM D G+Q  +  ++ +I MLC+E ++ +A +L +MM  + ++P              
Sbjct: 260 FNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCL 319

Query: 306 ---------------------DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
                                D ++Y  LIN  C+ L++++A  +  +M+ +G+ P    
Sbjct: 320 VGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKT 379

Query: 345 FVDIVRGLCEVGKFDESVN-------------------FLEDKC--GYV----------- 372
              +++ L   GK D++                     FL+  C  GY+           
Sbjct: 380 SGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELE 439

Query: 373 -------TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
                        L++  C AGK   A  + EK+ +  I  D  +++  I   C+  ++ 
Sbjct: 440 SYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVD 499

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           KA  L  +M  +   PD  TYS  + G  +    E  +++  ++  + +  D   Y+ + 
Sbjct: 500 KANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVE 559

Query: 485 EGLCQVEKITEAVEV 499
           + +C+ EK  E +++
Sbjct: 560 DMVCKDEKYKEWLDL 574



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 175/391 (44%), Gaps = 24/391 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYP---NVREALISLVFSFVNHYRVNG---AM 151
           TY  +I  L   GN+       Q M+ +  P   N R  +IS         +V     A+
Sbjct: 198 TYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAI 257

Query: 152 RVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
            +   M   G + +V  F+V++      G +++ K+       + + M++ GIVPN+ T 
Sbjct: 258 CLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK-------LLEMMIQIGIVPNLFTY 310

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++       + SA + F  M  KG  P+  ++ ++I G     +V++++ +  EM  
Sbjct: 311 TSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLH 370

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           +G+  ++     ++  L    K+++A  LF++++   +  D       ++ LC+N  + +
Sbjct: 371 VGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFE 430

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A  +  ++    +    + F  ++ GLC+ GK + +    E        P    +++++ 
Sbjct: 431 AMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIH 490

Query: 382 CCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
             C  G+   A  + +KM +   + D  +++I +R   E+ ++ K  +LL RM+   V P
Sbjct: 491 GFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWP 550

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           D   Y+      CK   Y++ L + ++   Q
Sbjct: 551 DDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQ 581


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 122/521 (23%), Positives = 230/521 (44%), Gaps = 12/521 (2%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M K    PN    N ++       R   AL  F  M ++GC P   TF  VI        
Sbjct: 292 MPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGN 351

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V ++  +   + ++G       Y  ++    +  ++++A  L++ MR   + PD +T+  
Sbjct: 352 VVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNI 411

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++   +  R +D + +L+D+ V+GL P   +F   V GLC  G+ DE++ FL D     
Sbjct: 412 LVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKG 471

Query: 373 TSP----HNALLECCCNAG----KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
            SP     N+++     AG     F   K ++        + C S    +  L  N  ++
Sbjct: 472 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL---LMGLSINGRLQ 528

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A EL+G+M+   +  +   ++  +    K  +   A  ++ ++  + +  D +++S  +
Sbjct: 529 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 588

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           +GL +   + EA  VF  M + G   ++ ++N LI G C   K+++A++L  +    G  
Sbjct: 589 DGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLL 648

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               T   I+ GL K  R +  + V   M   G + D+  Y  LI    +   + +    
Sbjct: 649 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 708

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            N M  +G  PD  T    +HG     +++     +++LVS   V ++  YN ++NG+  
Sbjct: 709 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS 768

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           + +  +A  L   +L   +VP+  T  LL+     + +  R
Sbjct: 769 D-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPER 808



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 11/257 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV---FVYKE 192
           SL+     + R+  A  ++  M   G  ++   F V+L      KRG  D V    ++ E
Sbjct: 516 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFF--KRG--DVVGAQSLWGE 571

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + GI P+V   +  ++ L +   +E A + F  M +KG  PN+  +  +I G     +
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +++++ +   M   G+  ++     II  LC++ ++  AI +F  M    L PD +TY  
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCG 370
           LIN  C+   + +A++++  M   G  P    +   + G C   + + +V  L++    G
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 751

Query: 371 YV--TSPHNALLECCCN 385
            V  T  +N++L   C+
Sbjct: 752 IVPNTVTYNSMLNGVCS 768



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 101/218 (46%), Gaps = 2/218 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
            +   I  L   G VEE   +   M+++       A  SL+  F    ++N A+++   M
Sbjct: 583 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVM 642

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G    +   N+++G + ++ R     + V+ +M + G+ P++ T N L+    +   
Sbjct: 643 RHRGLLPDIFTTNMIIGGLCKQGR-MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFD 701

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +A +   RM+  G  P+  T+ I I G  ++ R++ +V +L E+   GI      Y  
Sbjct: 702 MVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNS 761

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++  +C  + L+ A+ L   +  +  +P+ +T   L++
Sbjct: 762 MLNGVC-SDILDRAMILTARLLKMAFVPNVVTANLLLS 798


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 234/522 (44%), Gaps = 11/522 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  + + G+VP+V T N LL+ + ET   E  L  +  M      P+  TF IV + L 
Sbjct: 176 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 235

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +VD+++ +  EM ++G++ +   Y+  +  LC   K + A  + + +    +  + +
Sbjct: 236 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 295

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  +++ LC+ +RLD+A  +LE+    G  P    +  ++R  C++G    +V+  E  
Sbjct: 296 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 355

Query: 369 C--GYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
              G  T+ H  + LL+C    G    A     K  D  +  D   +NI +   C+N  +
Sbjct: 356 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 415

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A +LL  M    + PD   Y+  + G C     ++A +VF ++   ++  D ++Y+ L
Sbjct: 416 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 475

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
             G C+   + E  ++   M+  G   +S ++ I I G C    + +A  L ++    G 
Sbjct: 476 ASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI 535

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
            +    Y+ ++ G +         ++  ++  +G  +D  +   LI  +     ++  + 
Sbjct: 536 DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASN 595

Query: 604 FFNVMVKAGLVPD---RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
              +M++  +VPD      ++S+     D  + HL     + +V     +D  +Y IL+N
Sbjct: 596 VCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHL---WFHDMVQRGLSVDVIVYTILMN 652

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           G  K G   +A  L   M   G  PD   + +L+   + E +
Sbjct: 653 GYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETL 694



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 155/670 (23%), Positives = 256/670 (38%), Gaps = 108/670 (16%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+ + +  Y V   + +   +   G   SV  +N++L  I E    +   +  Y EM   
Sbjct: 160 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGE-YEMVLAAYNEMKCF 218

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            + P+V T   +   LF+  +++ AL  +  M + G  P++R +   + GL    + D +
Sbjct: 219 QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLA 278

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             IL E+    + +E   Y  ++  LC+E +L+EA +L +        PD   Y  LI  
Sbjct: 279 YVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRS 338

Query: 317 LCENLRLDDANDILEDMIVIGLTPT----------------------------------D 342
            C+   L +A D  E M+  G+                                     D
Sbjct: 339 YCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLD 398

Query: 343 DVFVDI-VRGLCEVGKFDESVNFL-EDKCGYVTS---PHNALLECCCNAGKFFLAKCILE 397
            V  +I +   C+ G  +E+V  L E K G +T     +  L+   C  G+   A+ + E
Sbjct: 399 KVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFE 458

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK-- 454
           +M    I  D  ++NI     C++  + + ++LL RM    + P+  TY   ++G C+  
Sbjct: 459 EMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGG 518

Query: 455 ---------------------------LCNY------EDALRVFRQVSAQSLVLDSISYS 481
                                      +C Y      + A  +F +V+ Q  ++D  S S
Sbjct: 519 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCS 578

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           KL+  LC+V  +  A  V   M ++       S++ LI   C    +DKA          
Sbjct: 579 KLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 638

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM--------- 592
           G S     YT +M G  K  R ++   +  QM   G   DV AY +L+            
Sbjct: 639 GLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGW 698

Query: 593 -------------SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
                        +  NKL       + M    + PD      L+ G      L      
Sbjct: 699 EGIAKERRSFLLRANHNKL------LSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEAREL 752

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
            ++++      D+  Y  LING   +G  S+A  LL  M+ KG  PD  T  +L  SS  
Sbjct: 753 FDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSS-- 810

Query: 700 EEIDSRRFAF 709
             + SR+  F
Sbjct: 811 --LRSRKIQF 818



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 133/626 (21%), Positives = 255/626 (40%), Gaps = 75/626 (11%)

Query: 46  QTTDYEAKIQSLRH----NLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTA 96
           +T +YE  + +        L+PD      + R L     +  AL+++  ++ +   +  A
Sbjct: 201 ETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMT-EMGVKPDA 259

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
             Y   ++ L   G  +    + Q + +E+ P    A   ++       R++ A ++L N
Sbjct: 260 RGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLEN 319

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
               G    V  ++ ++ +    K G   + V  Y+ MV  GI  N   ++YLL+   + 
Sbjct: 320 KARQGSNPDVYGYSYLIRSYC--KMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKL 377

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
                A+  F +    G   +   + I +     N  ++++V +L EM   G+  +   Y
Sbjct: 378 GMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHY 437

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           TC+I   C + +++ A ++F+ M   ++ PD +TY  L +  C++  + +  D+L+ M  
Sbjct: 438 TCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 497

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDES---VNFLEDK-------------CGYVTSPH--- 376
            GL P    +   + G C  G   E+    N +E+K             CGY+ S     
Sbjct: 498 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 557

Query: 377 --------------------NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
                               + L+   C  G    A  + + M +  +  D  S++  I 
Sbjct: 558 AYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLIS 617

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C+N ++ KA+     MV   +  D   Y+  + G CK    ++A ++F Q++   +  
Sbjct: 618 IYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKP 677

Query: 476 DSISYSKLVEGLCQ------VEKITEAVEVFCCMSKNGCSLSS----------SSFNILI 519
           D I+Y+ L++G  +       E I +    F   + +   LSS            + +LI
Sbjct: 678 DVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLI 737

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVE 576
            G C    + +A  L       G +     YT ++ G     ++ +A+DL   L +M+ +
Sbjct: 738 DGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDL---LQEMIDK 794

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCA 602
           G   D   + +L QS     K++ CA
Sbjct: 795 GIEPDELTFSVLNQSSLRSRKIQFCA 820



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 1/307 (0%)

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  ++ I  R L + +++ +A ++   M    V PD   YS+F++G C    Y+ A  +
Sbjct: 222 PDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVI 281

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
            ++++ + + +++++Y+ +++GLC+  ++ EA ++    ++ G +     ++ LI   C 
Sbjct: 282 LQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCK 341

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
           M  +  A+       S G        + ++    KL    + +    +    G  LD   
Sbjct: 342 MGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVI 401

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y I + +  +   + +     N M   GL PD+     L+ G     ++        +++
Sbjct: 402 YNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEML 461

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL-LVGSSVGEEID 703
             +   D   YNIL +G  K GL  +   LLD M  +G  P++ T+G+ +VG   G  + 
Sbjct: 462 KANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLS 521

Query: 704 SRRFAFD 710
                F+
Sbjct: 522 EAEVLFN 528



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 102/480 (21%), Positives = 198/480 (41%), Gaps = 20/480 (4%)

Query: 229 HKKGCC-PNSRTFEI--VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           H++ C  P S +F +  +IK  I    V  ++ +   +  LG+   +  +  ++  +   
Sbjct: 143 HRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAET 202

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            + E  +  +  M+   L PD  T+  +   L +  ++D+A  +  +M  +G+ P    +
Sbjct: 203 GEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGY 262

Query: 346 VDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              + GLC+ GK+D +   L+    +K       +N +++  C   +   A+ +LE  A 
Sbjct: 263 SSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKAR 322

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           +    D   ++  IR  C+   +  A +    MV   +  +C   S  +    KL    +
Sbjct: 323 QGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSE 382

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+  F +     L LD + Y+  ++  C+   + EAV++   M   G +     +  LI 
Sbjct: 383 AIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLIS 442

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G C+  ++  A ++      +       TY  +  G  K     ++  +L +M  +G   
Sbjct: 443 GYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP 502

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS------LLHGLADGSQLH 634
           +   Y I I        L +  + FNV+ + G +   E M S      LL G  D + + 
Sbjct: 503 NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG-IDHIEVMYSSMVCGYLLSGWTDHAYML 561

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            V     ++     ++D    + LIN L + G    AS +  +ML    VPD  ++  L+
Sbjct: 562 FV-----RVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLI 616


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 135/593 (22%), Positives = 271/593 (45%), Gaps = 56/593 (9%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +YK+M+  GI+P+V T + +L       ++  A   FR M++ G  PN  ++  +I  L 
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            + RV ++ ++  +M   GI  ++   T ++  L +  K +EA  +F+ +  L+L P+ +
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCV 462

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  L++  C+  +++ A  +L+ M    + P    F  I+ G  + G   ++V+ L + 
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDS-WNIPIRWLCENEEI 423
                 P    +  L++    AG+  +A    ++M  R++ + +  ++I +  L     +
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A  L+  M    + PD   Y++ + G  K  N   AL + +++  +++  D ++Y+ L
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 484 VEGL----------------------------------CQVEKITEAVEVFCCMSKNGCS 509
           ++GL                                  C   K  +A+++   M   G  
Sbjct: 643 IKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702

Query: 510 LSSSSFNILIYGLC----VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            ++ ++NILI GLC    V   +     +++ + S         + K++   ++L+R K 
Sbjct: 703 PNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQK- 761

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
             VVL +M+  G + D+  Y  LI+     + ++     ++ M   G+ P+  T  +LL 
Sbjct: 762 --VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLG 819

Query: 626 GLADGSQLHLVSSGINKLVSDSE----VLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           GL++   +  +     KLVS+      V +++ Y+IL++G  + G   +   L   M+ K
Sbjct: 820 GLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITK 879

Query: 682 GWVPDATTHGLLVG--SSVGEEIDSRRFAFD---SSSFPDSVS-DILAEGLGN 728
           G+VP   T+ +L+   +  G+ I++R    D       P+S + DIL  G  N
Sbjct: 880 GFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLN 932



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 112/532 (21%), Positives = 224/532 (42%), Gaps = 51/532 (9%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMV 194
           +L+  ++ H R + A     +M + G   ++  +N +L        G    V  +Y +M+
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQF--NASGLVSQVKLMYSDML 121

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G+VP+V ++N L+  L +   ++ AL   R  +      ++ T+  VI G      VD
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
               +L EM   G+  +      ++   CR   ++ A  +   +    +  D +    LI
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           +  CE + +  A +++E+      +   DV +DIV                         
Sbjct: 240 DGYCEAVLMSQATELIEN------SWRSDVKIDIV------------------------- 268

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            +N LL+  C  G    A+ +  +               I    ++E+  K  +++ +  
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNE---------------ILGFWKDEDRLKNNDVVTQNE 313

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
           + ++ P   TY+  +   CK    E++  +++++    ++ D ++ S ++ G C+  K+T
Sbjct: 314 IKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLT 373

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA  +F  M + G   +  S+  +I  L    +V +A  L+S     G S+   T T +M
Sbjct: 374 EAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVM 433

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL K+ + K+   V   +L    A +   Y  L+    +  K++   L    M K  + 
Sbjct: 434 DGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVP 493

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           P+  T  S+++G A    L      + ++V  + + ++ +Y ILI+G +K G
Sbjct: 494 PNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 201/485 (41%), Gaps = 29/485 (5%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK+       G +E  E + Q M KE  P       S++  +     ++ A+ VL  
Sbjct: 469 DGYCKL-------GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLRE 521

Query: 157 MNSGGFKLSVDVFNVVLGAIVE--EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           M       +  V+ +++    +  E+    DF    KEM    +  +    + LL  L  
Sbjct: 522 MVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC---KEMKSRRLEESNVIFDILLNNLKR 578

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             R++ A      M+ KG  P+   +  +I G         ++SI+ EM +  I+ ++  
Sbjct: 579 VGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVA 638

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I  L R  K +      +M+  L L PD +TY  +IN  C   + +DA DIL +M 
Sbjct: 639 YNALIKGLLRLGKYDPRYVCSRMIE-LGLAPDCITYNTIINTYCIKGKTEDALDILNEMK 697

Query: 335 VIGLTPTDDVFVDIVRGLCEVG--------KFDESVNFLEDKCGYVTSPHNALLECCCNA 386
             G+ P    +  ++ GLC+ G        KF        +K   +   H  L+      
Sbjct: 698 SYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLEL 757

Query: 387 GKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
            +    K +L++M  R I AD  ++N  IR  C    + KA +   +M V  + P+  TY
Sbjct: 758 KR---QKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 814

Query: 446 SAFVLG----KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
           +  + G           E+  ++  +++ + LV ++ +Y  LV G  +V    + + +  
Sbjct: 815 NTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHI 874

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M   G   +  ++N+LI       K+ +A  L +   + G    + TY  +  G + L 
Sbjct: 875 EMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLS 934

Query: 562 RAKDL 566
              ++
Sbjct: 935 YEPEI 939



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/480 (21%), Positives = 203/480 (42%), Gaps = 28/480 (5%)

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F  +I+  + + R   + +    M  LG+   L F+  ++        + +   ++  M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKF 358
              ++PD  +   L++ LC+   LD A   L +  V+ +   D+V +  ++ G C+ G  
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI---DNVTYNTVIWGFCQKGLV 178

Query: 359 DESVNFLED--KCG--YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           D+    L +  K G  + +   N L++  C  G    A+ ++  + D  +  D    N  
Sbjct: 179 DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTL 238

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY--------------- 458
           I   CE   + +A EL+     S V  D  TY+  +   CK  +                
Sbjct: 239 IDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWK 298

Query: 459 -EDALR---VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
            ED L+   V  Q   ++L    ++Y+ L+   C+   + E+  ++  M  NG      +
Sbjct: 299 DEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVT 358

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
            + ++YG C   K+ +A  L    Y  G      +Y  I+  L K  R  +   + +QM+
Sbjct: 359 CSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMV 418

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
           V G + D+     ++  + +  K K+    F  ++K  L P+  T  +LL G     ++ 
Sbjct: 419 VRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKME 478

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L    + K+  +    +   ++ +ING  K+G+ S+A  +L  M+ +  +P+   + +L+
Sbjct: 479 LAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 244/543 (44%), Gaps = 25/543 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVF----VY 190
           SLV S+ N      A ++L  M   G      V+N+ +G+I   E+    D +     VY
Sbjct: 349 SLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVY 408

Query: 191 KEMVKAGIVPN-VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           +EM+ +  V N V+T N+    L    + + A    + M +KG  P++ T+  VI  L  
Sbjct: 409 EEMLASSCVLNKVNTANF-ARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCE 467

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             +V+ +  +  EM  +G+  ++  YT +I   C+   +E+A   F  M ++   P  +T
Sbjct: 468 AMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVT 527

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L++   +  ++  A+DI   M+  G  P    +  +V GLC+ G+  ++        
Sbjct: 528 YTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
           G  TS          N G  F  +    +  D    +  ++   I  LC+  ++  A EL
Sbjct: 588 G--TSD---------NVGSDFYFE---GEHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 633

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           L  M  +   P+   Y A + G CK+   ++A  VF ++S    +    +Y+ L++ + +
Sbjct: 634 LDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFK 693

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             ++  A++V   M ++ C+ +  ++  +I GLC + +  KA++L S+    G +    T
Sbjct: 694 DRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVT 753

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           YT ++ GL K  +    L +  QM+ +GCA +   Y +LI        L +     + M 
Sbjct: 754 YTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 813

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSG-INKLVSDSEVLDSSMYNILINGLWKEGLT 668
           +       +   S++ G    S+  + S G + +L S   V  + +Y +LI+   K G  
Sbjct: 814 QTYWPKYVQGYCSVVQGF---SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRL 870

Query: 669 SQA 671
            +A
Sbjct: 871 EKA 873



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/518 (21%), Positives = 214/518 (41%), Gaps = 62/518 (11%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  G  PN    N L+           A     RM   GC P    + I I  + +   
Sbjct: 335 MMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEE 394

Query: 253 VD--DSVSILGEMFDLGIQLELSFYTCIIPM---------LCRENKLEEAIRLFKMMRAL 301
           +   D +++  ++++     E+   +C++           LC   K ++A ++ K+M   
Sbjct: 395 LPSPDLLALAEKVYE-----EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRK 449

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             +PD  TY ++I  LCE ++++ A  + ++M  +G+ P    +  ++   C+VG  +++
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA 509

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
            ++ ++      SP                                 ++   +    + +
Sbjct: 510 RSWFDEMESVGCSPSVV------------------------------TYTALLHAYLKTK 539

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV------------- 468
           ++ +A ++  RMV +   P+  TYSA V G CK    + A  V+ ++             
Sbjct: 540 QVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYF 599

Query: 469 ---SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
                 S+  + ++Y  L++GLC+  K+ +A E+   MS NGC  +   ++ LI G C +
Sbjct: 600 EGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKV 659

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
            K+D A  +       G   T  TYT ++  + K +R    + VL+QML   C  +V  Y
Sbjct: 660 GKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTY 719

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             +I  +    + +      ++M K G  P+  T  SL+ GL    ++ +      ++++
Sbjct: 720 TAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMIT 779

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
                +   Y +LIN     GL  +A  LL  M    W
Sbjct: 780 QGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 817



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/536 (21%), Positives = 231/536 (43%), Gaps = 87/536 (16%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           + + A +++  M   GF      ++ V+  + E  +    F+ +++EM   G++P+V T 
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFL-LFQEMKSVGVIPDVYTY 493

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++   +   IE A   F  M   GC P+  T+  ++   +   +V  +  I   M D
Sbjct: 494 TILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVD 553

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALD---------------LMPDELT 309
            G       Y+ ++  LC+  + ++A  ++ KM+   D               + P+ +T
Sbjct: 554 AGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVT 613

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD--ESVNFLED 367
           Y  LI+ LC+  ++ DA ++L+ M   G  P   ++  ++ G C+VGK D  + V F   
Sbjct: 614 YGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMS 673

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
           KCGY+ + H                                ++   I  + ++  +  A 
Sbjct: 674 KCGYLPTVH--------------------------------TYTSLIDAMFKDRRLDLAI 701

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ++L +M+ SS  P+  TY+A + G C++   + AL++   +  +    + ++Y+ L++GL
Sbjct: 702 KVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGL 761

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS-------LAYS 540
            +  K+  ++++F  M   GC+ +  ++ +LI   C    +D+A  L S         Y 
Sbjct: 762 GKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYV 821

Query: 541 SGTSYTTSTYTKIM---LGLV-----------------------KLQRAKDLLVVLAQML 574
            G       ++K     LGL+                       K  R +  L +  +M+
Sbjct: 822 QGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMM 881

Query: 575 VEGCALDV---EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
               +L++   + Y  LIQ++   ++L+     ++ + + G+VP+    + L+ GL
Sbjct: 882 EVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 148/704 (21%), Positives = 273/704 (38%), Gaps = 85/704 (12%)

Query: 47  TTDYEAKIQSL--RHN--LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKM 102
            +D++ K +    RH   L+   ++ VL +       ++ F W   Q  + HT   Y  +
Sbjct: 84  ASDFDGKAERFLRRHRDFLNDAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNAL 143

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
              L         E L + + ++    +   L  +V     H     A+  L  +   G+
Sbjct: 144 AEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGY 203

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPN-------------------- 201
           + S   +N ++  +     G  D  F V KEM + G   +                    
Sbjct: 204 RPSGATYNALVQVLATA--GQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDA 261

Query: 202 ----------VDTL--NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
                     +DT+    ++  L E +  + A+    RM    C PN  T+  ++ G + 
Sbjct: 262 LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLK 321

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
             ++     I+  M + G     S +  ++   C       A +L   M      P  + 
Sbjct: 322 KKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVV 381

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y   I  +C    L        D++ +     + V+ +++   C + K + + NF     
Sbjct: 382 YNIFIGSICSGEELPSP-----DLLALA----EKVYEEMLASSCVLNKVN-TANFAR--- 428

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYE 428
                       C C  GKF  A  I++ M  +  + D  +++  I +LCE  ++ KA+ 
Sbjct: 429 ------------CLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFL 476

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L   M    V+PD  TY+  +   CK+   E A   F ++ +       ++Y+ L+    
Sbjct: 477 LFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL 536

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS---- 544
           + +++ +A ++F  M   GC+ ++ +++ L+ GLC   +  KA  +   A   GTS    
Sbjct: 537 KTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEV--YAKMIGTSDNVG 594

Query: 545 --------YTTS------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
                   +T S      TY  ++ GL K  +  D   +L  M   GC  +   Y  LI 
Sbjct: 595 SDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALID 654

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              +  KL +    F  M K G +P   T  SL+  +    +L L    +++++  S   
Sbjct: 655 GFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTP 714

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +   Y  +I+GL + G   +A  LL +M  +G  P+  T+  L+
Sbjct: 715 NVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLI 758



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 125/538 (23%), Positives = 226/538 (42%), Gaps = 30/538 (5%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +  R L        A +I K + ++K F     TY K+I  L  A  VE+   L Q M  
Sbjct: 425 NFARCLCGMGKFDKAFQIIKLM-MRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 483

Query: 125 ERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A      M S G   SV  +  +L A ++ K+  
Sbjct: 484 VGVIPDVYTYTI-LIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQ-V 541

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM--------------- 228
                ++  MV AG  PN  T + L++ L +    + A + + +M               
Sbjct: 542 PQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEG 601

Query: 229 -HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
            H     PN  T+  +I GL    +V D+  +L  M   G +     Y  +I   C+  K
Sbjct: 602 EHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGK 661

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+ A  +F  M     +P   TY  LI+ + ++ RLD A  +L  M+    TP    +  
Sbjct: 662 LDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTA 721

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC +G+  +++  L    +  C      + +L++    +GK  ++  +  +M  + 
Sbjct: 722 MIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            A +  ++ + I   C    + +A+ LL  M  +        Y + V G  K   +  +L
Sbjct: 782 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASL 839

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL---SSSSFNILI 519
            +  ++ +  +V  +  Y  L++   +  ++ +A+E+   M +   SL   S  ++  LI
Sbjct: 840 GLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLI 899

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
             LC+  +++KA  L S     G     S +  ++ GL+K+ +  + L +   M  EG
Sbjct: 900 QALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 95/209 (45%), Gaps = 7/209 (3%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L  +  +  +L++F  +  Q    +   TY  +I     AG ++E   L   M + 
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYV-TYRVLINHCCAAGLLDEAHSLLSEMKQT 815

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            +P   +   S+V  F   +    ++ +L  + S G      V+ +++ +  +  R    
Sbjct: 816 YWPKYVQGYCSVVQGFSKKFI--ASLGLLEELESHGMVSIAPVYGLLIDSFSKAGR-LEK 872

Query: 186 FVFVYKEMVKAGIVPNV---DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            + ++KEM++     N+   DT   L++ L   +++E A + +  + +KG  P    F  
Sbjct: 873 ALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFIC 932

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           +IKGLI  ++ ++++ +   M D G+  +
Sbjct: 933 LIKGLIKVNKWNEALQLCYSMCDEGVNWQ 961



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 70/343 (20%), Positives = 125/343 (36%), Gaps = 47/343 (13%)

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA----------------------- 447
           N+ +R  C +    KA E LGR+      P  ATY+A                       
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 448 ------------FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                       F    CK   + DAL +   +  +   LD++  ++++ GL +     E
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVM---IEREDFKLDTVLCTQMISGLMEASLFDE 292

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+     M  N C  +  ++  L+ G    +++    R+ S+  + G +   S +  ++ 
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF------FNVMV 609
                +       +L +M   GC      Y I I S+    +L    L       +  M+
Sbjct: 353 SYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEML 412

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            +  V ++    +    L    +       I  ++    V D+S Y+ +I  L +     
Sbjct: 413 ASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVE 472

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFD 710
           +A  L   M   G +PD  T+ +L+ S   VG  I+  R  FD
Sbjct: 473 KAFLLFQEMKSVGVIPDVYTYTILIDSFCKVG-LIEQARSWFD 514


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 210/493 (42%), Gaps = 34/493 (6%)

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVDDSVSILGEM 263
            N LL  L +  R  + +  +  +  K    P+  TF I+I       ++  + S+LG +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
             +G Q+++   T ++  LC + ++ EA+ L           DE+ Y  +IN LC+  + 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
            DA  +   M  I + P   ++  ++ GLC+ G  DE+       CG  T          
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEA-------CGLCT---------- 234

Query: 384 CNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV-SSVVPD 441
                         +M +  I  D  S+N  I   C     + A +LL  MVV   V PD
Sbjct: 235 --------------EMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             T++  + G CKL    +A  V   +  +    D +SY+ L+ G C    + EA +VF 
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M +     +  S+  LI G C +R VD+A+ L +  ++      T TY  ++ GL K  
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R+     ++  M   G   D+  Y +L+    +  K       F  +++ G+ P+  T  
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
            LL GL    +L         L +     +   YNI+I+GL KEG   +A  LL  M+  
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNN 520

Query: 682 GWVPDATTHGLLV 694
            ++P+  T   +V
Sbjct: 521 NYLPNYITFDTIV 533



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 214/465 (46%), Gaps = 6/465 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L  +++ KR  A          K  I P++ T + L+    +  ++  A      +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G   + R    ++KGL    RV ++VS+L E  D G + +   Y  II  LC+  K 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +AI++F  M+ + + P+ + Y  +I+ LC+   +D+A  +  +M+  G+      +  +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 349 VRGLCEVGKFDESVNFLED-----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           + G C VG+F  +V  L++     K        N L++  C  G+   A  ++  M  R 
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              D  S+N  +   C +  + +A ++  +MV  + +P+  +Y   + G CK+   ++A+
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +  ++  ++LV D+++Y+ L++GL +  +     ++   M  +G      ++N+L+   
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDY 431

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
               K DKA+ L       G S    TY  ++ GL K  R K    +   +  +GC  ++
Sbjct: 432 FKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNI 491

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             Y I+I  + ++  L +       MV    +P+  T  +++  +
Sbjct: 492 RTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/441 (21%), Positives = 191/441 (43%), Gaps = 45/441 (10%)

Query: 128 PNVREALIS---LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           P ++ +LI+   L+ +F    ++  A  +L N+   GF++ V +   ++  +  + R   
Sbjct: 99  PTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGR-VL 157

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           + V +  E V  G   +      ++  L +  +   A+  F +M K    PN   +  VI
Sbjct: 158 EAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVI 217

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDL 303
            GL     VD++  +  EM + GI+L++  Y  +I   C   + + A++L  +M+    +
Sbjct: 218 DGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKV 277

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP--------------------TDD 343
            PD  T+  LI+ LC+  R+ +A +++  MI  G  P                       
Sbjct: 278 YPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQ 337

Query: 344 VF---------------VDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           VF                 ++ G C+V   DE++  L +       P    +N LL+   
Sbjct: 338 VFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLS 397

Query: 385 NAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            +G+      ++E M A  + AD  ++N+ +    ++E+  KA  L   ++   + P+  
Sbjct: 398 KSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIR 457

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY+  + G CK    + A  +F+ +SA+    +  +Y+ ++ GLC+   + EA  +   M
Sbjct: 458 TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517

Query: 504 SKNGCSLSSSSFNILIYGLCV 524
             N    +  +F+ ++  + V
Sbjct: 518 VNNNYLPNYITFDTIVRAILV 538



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 2/243 (0%)

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM-SKNGCSLSS 512
           KL  + D +  F  +           ++KL+  L ++++    V ++  + SK     S 
Sbjct: 46  KLPTFNDTVSSFHHILHHHPPPPIQHFNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSL 105

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +F+ILI     + ++  A  L       G        T +M GL    R  + + +L +
Sbjct: 106 ITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHE 165

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            +  G   D   Y  +I  + +  K +D    F  M K  + P+     +++ GL     
Sbjct: 166 YVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGL 225

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV-PDATTHG 691
           +        ++V +   LD   YN +I+G    G    A  LLD M+ +G V PD  T  
Sbjct: 226 VDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFN 285

Query: 692 LLV 694
           +L+
Sbjct: 286 ILI 288


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 195/422 (46%), Gaps = 14/422 (3%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAM 151
           F+H  +T+  MI +L         EG+ + M +E      +  +++   +   +R   A+
Sbjct: 46  FRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAI 105

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
           RV   M     K +   +  V   +VEE        F YKEM + GI P V +LN L++ 
Sbjct: 106 RVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGF-YKEMREKGIPPTVVSLNILIKA 164

Query: 212 LFETNR-IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
           L +    +ESA   FR M  +GC P+S T+  +I GL    ++  +  +L EM + G+  
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
            +  YT +I  LC+ N L+EAI L + M    + P+  TY  L++ LC++     A ++L
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL 284

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNA 386
           E M+   L P    +  ++ GLC+ GK  E+V  L+        P    +  ++   C A
Sbjct: 285 EVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAA 344

Query: 387 GKFFLAKCILEKMADRKIA-DCDSW-------NIPIRWLCENEEIRKAYELLGRMVVSSV 438
             +  A   +++MA   I+ +  SW       N+ ++ LC N +  +A++L   M    +
Sbjct: 345 CNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGI 404

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
             +  T+   V   CK  +   A R+  ++     + D   ++ L+ GL   +K+ E  E
Sbjct: 405 SVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTE 464

Query: 499 VF 500
           + 
Sbjct: 465 LL 466



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 177/381 (46%), Gaps = 20/381 (5%)

Query: 217 RIESALDQFRRMHKK---GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           R+   LD  R  HK       P  +++  V   L+  + V  ++    EM + GI   + 
Sbjct: 97  RVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVV 156

Query: 274 FYTCIIPMLCR-ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
               +I  LC+ E  +E A RLF+ M      PD  TY  LIN LC+  ++  A ++L++
Sbjct: 157 SLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDE 216

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK 388
           M   GL+P+   +  ++ GLC+    DE++  LE+       P    +++L++  C +G 
Sbjct: 217 MEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGH 276

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A  +LE M  R++  +  +++  I  LC+  + R+A E+L RM +  + PD   Y  
Sbjct: 277 SSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGR 336

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS-------KLVEGLCQVEKITEAVEVF 500
            + G C  CNY++A     +++   +  +  S++        +V+GLC     T A +++
Sbjct: 337 IISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLY 396

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL--- 557
             M   G S+   +F+ L+   C    ++KA R+       G       +  +M GL   
Sbjct: 397 LSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDR 456

Query: 558 VKLQRAKDLLVV-LAQMLVEG 577
            K++   +LLV  L Q  VE 
Sbjct: 457 KKVRETTELLVAELKQKFVEA 477



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/480 (20%), Positives = 198/480 (41%), Gaps = 43/480 (8%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVY---KEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           FK    + N ++  +++ ++     + ++    E    G   + +T   ++  L   N+ 
Sbjct: 7   FKWPKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQF 66

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
             A     RM ++ C      F  + +G     R  D++ +  +M D  ++     Y  +
Sbjct: 67  RPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTV 126

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR-LDDANDILEDMIVIG 337
             +L  EN ++ AI  +K MR   + P  ++   LI  LC+N   ++ A  +  +M   G
Sbjct: 127 FDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRG 186

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
             P    +  ++ GLC++GK  +                               AK +L+
Sbjct: 187 CQPDSYTYGTLINGLCKLGKISQ-------------------------------AKELLD 215

Query: 398 KMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M ++ ++    S+   I  LC++  + +A ELL  M+++ + P+  TYS+ + G CK  
Sbjct: 216 EMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSG 275

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           +   A+ +   +  + L+ + ++YS L+ GLC+  K  EAVE+   M   G    +  + 
Sbjct: 276 HSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYG 335

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT-------KIMLGLVKLQRAKDLLVV 569
            +I GLC      +A          G S   +++T        ++ GL           +
Sbjct: 336 RIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQL 395

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
              M   G ++++  +  L++   ++  L   A     M+  G +PD      L+ GL D
Sbjct: 396 YLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWD 455



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 172/402 (42%), Gaps = 29/402 (7%)

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D  T+  +I+ L    +   A  +LE M       T+DVF+ I RG   V +  +++   
Sbjct: 49  DHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVF 108

Query: 366 EDKCGYVTSPHN----ALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCEN 420
                +   P       + +          A    ++M ++ I     S NI I+ LC+N
Sbjct: 109 HKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKN 168

Query: 421 EE-IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           EE +  A+ L   M      PD  TY   + G CKL     A  +  ++  + L    +S
Sbjct: 169 EETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVS 228

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L+ GLCQ   + EA+E+   M  NG   +  +++ L+ GLC      +A+ L  +  
Sbjct: 229 YTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMV 288

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                    TY+ ++ GL K  + ++ + +L +M ++G   D   Y  +I  +      +
Sbjct: 289 RRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQ 348

Query: 600 DCALFFNVMVKAGLVPDRETML-------SLLHGLAD------GSQLHLV--SSGINKLV 644
           + A F + M   G+ P+R +          ++ GL +        QL+L   + GI+   
Sbjct: 349 EAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGIS--- 405

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                ++   ++ L+    K G  ++A+ +L+ M+  G +PD
Sbjct: 406 -----VEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPD 442



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 139/309 (44%), Gaps = 12/309 (3%)

Query: 66  LIRVL-DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           LI+ L  N   + SA ++F+ +   +  Q  + TY  +I  L   G + + + L   M +
Sbjct: 161 LIKALCKNEETVESAFRLFREMP-NRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEE 219

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
           +       +  SL+        ++ A+ +L  M   G + +V  ++ ++  +   K G +
Sbjct: 220 KGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLC--KSGHS 277

Query: 185 DFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                  E MV+  ++PN+ T + L+  L +  +   A++   RM  +G  P++  +  +
Sbjct: 278 SQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRI 337

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM-------LCRENKLEEAIRLFK 296
           I GL A     ++ + + EM   GI    + +T  + M       LC       A +L+ 
Sbjct: 338 ISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYL 397

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            MR   +  +  T++ L+ C C+   L+ A  ILE+MI+ G  P + ++  ++ GL +  
Sbjct: 398 SMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRK 457

Query: 357 KFDESVNFL 365
           K  E+   L
Sbjct: 458 KVRETTELL 466


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 238/542 (43%), Gaps = 60/542 (11%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA---GIVPNVDTLNYLLEVLFETNRIE 219
           K +V  FN VL  IV+E   F   +  Y  +V +    I PN  T N +++ +     ++
Sbjct: 129 KQTVKSFNSVLNVIVQEGL-FNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD 187

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A++ FR +  + C P++ T+  ++ GL    R+D++VS+L EM   G    L  +  +I
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLI 247

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             LC++  L  A +L   M     +P+E+TY  L++ LC   +L+ A  +L  M+     
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP--HNALLECCCNAGKFFLAKCI 395
           P D  F  ++ G    G+  +    L   +  G+  +   +++L+   C  GKF  A  +
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMEL 367

Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            ++M  +    +   ++  I  LC   ++ +A   L  M     +P+  TYS+ + G  +
Sbjct: 368 WKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFE 427

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             +   A+ V+++++  + + + + YS L+ GLC+  K  EA+ V+  M   G  L   +
Sbjct: 428 AGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVA 487

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           ++ +I+G C    V++ ++L                                     QML
Sbjct: 488 YSSMIHGFCNANLVEQGLKL-----------------------------------FNQML 512

Query: 575 VEGCAL--DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            +G  +  DV  Y IL+ +   Q  +       N+M+  G  PD  T    L  L +   
Sbjct: 513 CQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRE--- 569

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                  +N      E LD      L+  L K   T  AS ++++M+ K  +P A+T  +
Sbjct: 570 ------NMNPPQDGREFLDE-----LVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAM 618

Query: 693 LV 694
           +V
Sbjct: 619 VV 620



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/350 (20%), Positives = 135/350 (38%), Gaps = 94/350 (26%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L L G +E+   L   MV  +         +L+  FV   R +   RVLV++
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G + +  V++ ++  + +E + F   + ++KEMV  G  PN    + L++ L    +
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGK-FNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGK 395

Query: 218 IESALDQFRRMHKKGCCPNSRTFE-----------------------------------I 242
           ++ A      M  KG  PNS T+                                    I
Sbjct: 396 LDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSI 455

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM--RA 300
           +I GL  + +  +++ +  +M   GI+L++  Y+ +I   C  N +E+ ++LF  M  + 
Sbjct: 456 LINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQG 515

Query: 301 LDLMPDELTYEELINCLC-----------ENLRLD------------------------- 324
             + PD +TY  L+N  C            N+ LD                         
Sbjct: 516 PVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQ 575

Query: 325 DANDILEDMIV--------IG------------LTPTDDVFVDIVRGLCE 354
           D  + L++++V        IG            L P    +  +V+ +C+
Sbjct: 576 DGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCK 625



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 37/195 (18%)

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +FN++I  +C +  VDKAI +         +    TY+ +M GL K +R  + + +L +M
Sbjct: 172 TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM 231

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
            VEG   ++ A+ +LI ++ ++  L   A   + M   G VP+  T              
Sbjct: 232 QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVT-------------- 277

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                                YN L++GL  +G   +A  LL+ M+    VP+  T G L
Sbjct: 278 ---------------------YNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTL 316

Query: 694 VGSSV--GEEIDSRR 706
           +   V  G   D  R
Sbjct: 317 INGFVMQGRASDGTR 331


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/532 (22%), Positives = 238/532 (44%), Gaps = 36/532 (6%)

Query: 35  LSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIF---KWVSIQKR 91
           L++ +  I + QT    + ++ L  +  P H I +++      S   +F    W+S    
Sbjct: 37  LAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPT 96

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMV----KERYPNVREALI------------ 135
           F+HT+ +YC M   L      +E + + + +V    K+   +V  A++            
Sbjct: 97  FRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVF 156

Query: 136 -SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
            +L+ ++ +   V+ A++    + +  F++       +L  ++        + F Y E++
Sbjct: 157 DALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTF-YSEIL 215

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + G  P V   N L+    +   I  A   F  + K+G  P + +F  +I GL  +  +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +   +   M +  I  ++  Y+ +I  LC+E +L+ A +LF  M+   L P+ +T+  LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---------VNFL 365
           +    + R+D A +    M+ +G+ P   ++  ++ GLC+VG  +++         V   
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
            DK  Y T     L++  C  G    A  I + M +  +  D  ++   I   C +  +R
Sbjct: 396 PDKITYTT-----LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A   L  MV + + PD ATY+  + G CK  N +   ++ +++         I+Y+ L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            GLC+  ++  A  +   M   G +    ++NIL+ G C   K +  ++LR+
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN 562



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 1/320 (0%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMV 434
           +N L+   C  G    AK I  ++  R +     S+N  I  LC++  + + + L   M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            + + PD  TYS  + G CK    + A ++F ++  + L  + I+++ L++G  +  ++ 
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A+  +  M   G       +N L+ GLC +  V+KA +L       G      TYT ++
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G  K    +  + +   M  EG  LD  A+  LI       +++D       MV+AG+ 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  T   ++ G      + +    + ++  +        YN+L+NGL K+G    A+ L
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525

Query: 675 LDLMLGKGWVPDATTHGLLV 694
           L+ ML  G  PD  T+ +L+
Sbjct: 526 LEAMLNLGVTPDDITYNILL 545



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 166/353 (47%), Gaps = 9/353 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F     +  A  +   +   G + +   FN ++  + +  R   +   + K M + 
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS-RNLDEGFRLKKTMEEN 287

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            I P+V T + L+  L +  R++ A   F  M ++G  PN  TF  +I G   + R+D +
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSA 347

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           ++   +M  +G++ +L  Y  ++  LC+   + +A +L   M+ + + PD++TY  LI+ 
Sbjct: 348 MNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDG 407

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
            C+   L+ A +I + M   G+   +  F  ++ G C  G+  ++   L +       P 
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467

Query: 377 NA----LLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
           +A    +++  C  G   +   +L++M  +       ++N+ +  LC+  +++ A  LL 
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLE 527

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            M+   V PD  TY+  + G CK    ED L++  +   + L++D   Y+ LV
Sbjct: 528 AMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLV 577



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 156/390 (40%), Gaps = 33/390 (8%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P    Y  LIN  C+   + DA  I  ++   GL PT   F  ++ GLC+    DE    
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG--- 277

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
                                   F L K + E   +R   D  ++++ I  LC+   + 
Sbjct: 278 ------------------------FRLKKTMEE---NRIYPDVFTYSVLIHGLCKEGRLD 310

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A +L   M    + P+  T++A + G+ +    + A+  + Q+    +  D + Y+ L+
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLL 370

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+V  + +A ++   M   G      ++  LI G C    ++ A+ +R      G  
Sbjct: 371 NGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                +T ++ G  +  R +D    L +M+  G   D   Y ++I    ++  +K     
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              M   G  P   T   L++GL    Q+   +  +  +++     D   YNIL+ G  K
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            G   +A  LL L   KG + D   +  LV
Sbjct: 551 NG---KAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 51  EAKIQSLRHN-LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           E + + LR   +S + LI  L  + +L    ++ K +  + R      TY  +I  L   
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME-ENRIYPDVFTYSVLIHGLCKE 306

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           G ++  E L   M +           +L+       R++ AM     M + G K  + ++
Sbjct: 307 GRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMY 366

Query: 170 NVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           N +L  +     V + R   D      EM   G+ P+  T   L++   +   +ESA++ 
Sbjct: 367 NTLLNGLCKVGDVNKARKLVD------EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            + M+++G   ++  F  +I G   + RV D+   L EM + G++ + + YT +I   C+
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           +  ++   +L K M+     P  +TY  L+N LC+  ++ +AN +LE M+ +G+TP D  
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 345 FVDIVRGLCEVGKFDESVNFLEDK 368
           +  ++ G C+ GK ++ +    +K
Sbjct: 541 YNILLEGHCKNGKAEDLLKLRNEK 564


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 130/568 (22%), Positives = 253/568 (44%), Gaps = 15/568 (2%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           H+  ++ + N  + AL+ FKW S   +F H+  TY  +I KL      + +  L   M  
Sbjct: 41  HIAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPH 100

Query: 125 E-RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P   E  ++++        +   ++VL  ++  G   S+ +FN +L  +V+     
Sbjct: 101 AIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDIDV 160

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           A   F  K+M+ +G+  +  T   L++ L  TNRI       + M  +G  PN+  +  +
Sbjct: 161 AR-EFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTL 219

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           +  L  N +V  + S++ E+ +     +++F   +I   C+E  L +A+ L +   +L  
Sbjct: 220 LHALCKNGKVGRARSLMDEIEEPN---DVTF-NVLIAAYCKEENLVQALVLLEKSFSLGF 275

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +PD +T  +++  LC   R+ +A ++LE +   G       +  ++RG C +GK   +  
Sbjct: 276 VPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHR 335

Query: 364 FLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLC 418
           FL++     C      +N L+   C++G F +A  +   M    I+ + D+++  I+ L 
Sbjct: 336 FLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLF 395

Query: 419 ENEEIRKAYELLGRMVVSSVVPD--CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
               I +  ++L  M  S        + Y++ + G  K   +++AL    ++  + L   
Sbjct: 396 FGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKM--EKLFPR 453

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           ++  S  + G C+   +  A  VF  M   G + +   ++ L++G C    + +A  L +
Sbjct: 454 AVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMN 513

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G     S +  ++ G     + +  L +L  M+  GC  D   Y  LI ++  + 
Sbjct: 514 EMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKG 573

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLL 624
             +     FN M++ G+ PD  T  SLL
Sbjct: 574 NFQKALSIFNQMIEKGITPDSSTWNSLL 601



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 218/500 (43%), Gaps = 16/500 (3%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           T   L++ L   +R ++       M H  G  P+   F  VI+GL     +   + +L  
Sbjct: 74  TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDL 133

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENL 321
           +   G    L  +  I+ +L + + ++ A   + K M    +  D+ T+  L+  LC   
Sbjct: 134 ISKFGKNPSLKIFNSILDVLVKVD-IDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTN 192

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----N 377
           R+ D   +L+ M   G+ P   V+  ++  LC+ GK   + + +++    +  P+    N
Sbjct: 193 RIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDE----IEEPNDVTFN 248

Query: 378 ALLECCCNAGKFFLAKCILEK-MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            L+   C       A  +LEK  +   + D  +    +  LC    + +A E+L R+   
Sbjct: 249 VLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYK 308

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
             + D   Y+  + G C+L   + A R  +++  +  + +  +Y+ L+ G C       A
Sbjct: 309 GGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMA 368

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS--GTSYTTSTYTKIM 554
           +++F  M  +G S +  +++ LI GL    ++++ +++  L   S  G+    S Y  ++
Sbjct: 369 LDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVL 428

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL K     + L  L +M  E          + I    E+  +K+  + F+ M+  G  
Sbjct: 429 YGLYKKNMWDEALEFLMKM--EKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGT 486

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           P+      L+HG      L      +N++V     L +S +N LI+G   +G    A  L
Sbjct: 487 PNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKL 546

Query: 675 LDLMLGKGWVPDATTHGLLV 694
           LD M+G+G VPD  T+  L+
Sbjct: 547 LDDMVGRGCVPDRGTYSPLI 566



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 182/425 (42%), Gaps = 22/425 (5%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+    R+L  M S G K +  V+N +L A+ +  +     V   + ++     PN  T 
Sbjct: 193 RIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGK-----VGRARSLMDEIEEPNDVTF 247

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L+    +   +  AL    +    G  P+  T   V++ L    RV ++V +L  +  
Sbjct: 248 NVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEY 307

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G  +++  Y  ++   CR  K++ A R  K M     +P+  TY  LI+  C++   D 
Sbjct: 308 KGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDM 367

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE------DKCGYVTSPHNAL 379
           A D+  DM   G++   D +  +++GL   G+ +E +  LE         G   SP+N++
Sbjct: 368 ALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSV 427

Query: 380 LECCCNAGKF-----FLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           L        +     FL K  +EK+  R +      ++ I   CE   ++ A  +  +M+
Sbjct: 428 LYGLYKKNMWDEALEFLMK--MEKLFPRAV----DRSLRILGFCEKGAVKNAKMVFDQMI 481

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+   Y   V G C+  N  +A  +  ++      L +  ++ L+ G C   K  
Sbjct: 482 NEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDE 541

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A+++   M   GC     +++ LI  LC      KA+ + +     G +  +ST+  ++
Sbjct: 542 SALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601

Query: 555 LGLVK 559
           + L K
Sbjct: 602 IRLSK 606


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 211/471 (44%), Gaps = 35/471 (7%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M + G+  +V+ FN+++ A+ +E +       VY  M+K  I PNV + N +++   +  
Sbjct: 205 MVASGYSENVNTFNLIIYALCKECKLLEAISVVYL-MLKIEIWPNVVSFNMIIDKASKMG 263

Query: 217 RIESALDQFRR---MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
            ++ AL   R    +      PN  T+  +I G     R++ + ++L EM  LGI     
Sbjct: 264 EMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNER 323

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I    R+  L+ A RL   M    L+PD + Y  LI  L     L++A+ +L DM
Sbjct: 324 TYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDM 383

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
           I   + P +  +  + +GLC  G  ++++     +  Y     N                
Sbjct: 384 INRRILPDEFTYSILTKGLCLSGHLNKAL-----RVHYYIVERNL--------------- 423

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
                     + D  + NI I ++ ++  I  A +LL  M+V  + PD  TY   V G C
Sbjct: 424 ----------VKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHC 473

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    E A++++ +        + + Y+ +++GLC+   I  A  +   + +NG  L S 
Sbjct: 474 KEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQNGF-LDSV 532

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N L++G CV  +V+KA  L     + G+     +Y  ++  L K+   +  + ++  M
Sbjct: 533 TYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAM 592

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
             +G   D+  Y  LI +  +     +     + MV  G VPDR+T  SL+
Sbjct: 593 ASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSLV 643



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 148/650 (22%), Positives = 259/650 (39%), Gaps = 116/650 (17%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
            ++R   N+  L  AL+ + WV  +  F H+ ++ C ++  L  + N  +   + ++++ 
Sbjct: 63  RVVREFRNSPQL--ALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLML 120

Query: 125 ERYPNVREALISLVFSF----VNHYRVNGAMRVLVNMNS--GGF----KLSVDVFNVVLG 174
           +   +  E L  L+ S+     N    +  +R    + S  G +    KL ++ F V + 
Sbjct: 121 KNGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIH 180

Query: 175 A-----IVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           A      +  K G  D F  +Y EMV +G   NV+T N ++  L +  ++  A+     M
Sbjct: 181 AWNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLM 240

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K    PN  +F ++I          D  S +GEM DL ++L                  
Sbjct: 241 LKIEIWPNVVSFNMII----------DKASKMGEM-DLALKLT----------------- 272

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
               R  +++    + P+ +TY  +IN  C+  RL+ A ++L +MI +G+   +  +  +
Sbjct: 273 ----RNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPL 328

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           + G    G  D +    +                              E +  R I D  
Sbjct: 329 IDGYARKGSLDVAFRLCD------------------------------EMVETRLIPDTV 358

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
            +N  I WL    E+ +A  LL  M+   ++PD  TYS    G C   +   ALRV   +
Sbjct: 359 VYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYI 418

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             ++LV D+ +++ L+  + Q   I  A ++   M   G      ++  L+ G C   K+
Sbjct: 419 VERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKI 478

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           + A+++      +        Y  I+ GL K Q + D   +L   L +   LD   Y  L
Sbjct: 479 EAAVQIYDKTVKADGKSNLVVYNSILDGLCK-QGSIDAARLLVDKLQQNGFLDSVTYNTL 537

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           +       +++     F  M+  G                  S +++VS           
Sbjct: 538 LHGFCVNGEVEKAFALFLEMINVG------------------SLVNIVS----------- 568

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
                 YNI+IN L K GL  QA  L+  M  +G VPD  T+  L+ + V
Sbjct: 569 ------YNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFV 612



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 138/309 (44%), Gaps = 12/309 (3%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           E  K + +   MV S    +  T++  +   CK C   +A+ V   +    +  + +S++
Sbjct: 194 ETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFN 253

Query: 482 KLVEGLCQVE------KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
            +++   ++       K+T   EV   +S    S +  ++N +I G C +R+++ A  + 
Sbjct: 254 MIIDKASKMGEMDLALKLTRNTEV---ISGGSVSPNIVTYNCIINGFCKIRRLESAKNVL 310

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL-DVEAYCILIQSMSE 594
           +     G      TY  ++ G  + + + D+   L   +VE   + D   Y  LI  +  
Sbjct: 311 AEMIKLGIDSNERTYAPLIDGYAR-KGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYI 369

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           + +L++ +   + M+   ++PD  T   L  GL     L+        +V  + V D+  
Sbjct: 370 EGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYT 429

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDSSS 713
           +NILIN +++    + A  LL  M+ +G  PD  T+G LV     E +I++    +D + 
Sbjct: 430 HNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTV 489

Query: 714 FPDSVSDIL 722
             D  S+++
Sbjct: 490 KADGKSNLV 498



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/352 (20%), Positives = 145/352 (41%), Gaps = 39/352 (11%)

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +E +A     + +++N+ I  LC+  ++ +A  ++  M+   + P+  +++  +    K+
Sbjct: 203 MEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKM 262

Query: 456 CNYEDALRVFRQ---VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
              + AL++ R    +S  S+  + ++Y+ ++ G C++ ++  A  V   M K G   + 
Sbjct: 263 GEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNE 322

Query: 513 SSFNILIYGLCVMRKVDKAIRL-----------RSLAYSS------------GTSYTTS- 548
            ++  LI G      +D A RL            ++ Y+S              S+  S 
Sbjct: 323 RTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSD 382

Query: 549 -----------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
                      TY+ +  GL         L V   ++      D   + ILI  M +   
Sbjct: 383 MINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRN 442

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           +       + M+  G+ PD  T  +L+ G     ++       +K V      +  +YN 
Sbjct: 443 IAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNS 502

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
           +++GL K+G    A  L+D +   G++   T + LL G  V  E++ + FA 
Sbjct: 503 ILDGLCKQGSIDAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVE-KAFAL 553


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 215/526 (40%), Gaps = 52/526 (9%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G    V   N VL  + +  R + D   V+ EM++ GI P++ T N LL+   +  
Sbjct: 193 MASHGVAPDVKDCNRVLRVLSDAAR-WDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 217 RIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILG------------- 261
           R +      + M  +G  C PN  T  +VI GL     ++++  ++              
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTY 311

Query: 262 ---------------------EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
                                EM + GI   +  Y  +I  L +  ++E A   F  MRA
Sbjct: 312 NPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRA 371

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           + L PD +TY  L+N  C+   L +A  +  D+   GL PT   +  ++ G C +G  +E
Sbjct: 372 MGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEE 431

Query: 361 SVNF---------LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSW 410
           +            L D C Y       L++   NA    +A+   ++M  + +  DC ++
Sbjct: 432 ARRLKEEMVEQGCLPDVCTYTI-----LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N  IR       I KA+ L   M++  +  D  TY+  + G CK  N  DA  +  ++  
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
             L  D I+Y+ L+   C+   + EA + F  M  +G + S+ ++ + I+  C    +  
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A          G      TY  ++  L +  R +       +ML  G   +   Y +LI 
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
              ++   +D   F+  M + G+ PD  T  +L  G  +G   H +
Sbjct: 667 GNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAI 712



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 224/534 (41%), Gaps = 51/534 (9%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            + EM   G+ P+V   N +L VL +  R +        M + G  P+  T+  ++   +
Sbjct: 189 AFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFL 248

Query: 249 ANSRVDDSVSILGEMFDLG---IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
              R D    +L EM   G   +  +++ +  +I  L R+  LEEA  + + MR L    
Sbjct: 249 KEGRNDKVAMLLKEMETRGSGCLPNDVT-HNVVITGLARKGDLEEAAEMVEGMR-LSKKA 306

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES-VNF 364
              TY  LI  L     +  A+D+  +M   G+ PT   +  ++ GL + G+ + + V F
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366

Query: 365 LEDKCGYVTS---PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
           +E +   +      +N+LL   C AG                                  
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGS--------------------------------- 393

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +++A  L G +  + + P   TY+  + G C+L + E+A R+  ++  Q  + D  +Y+
Sbjct: 394 -LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYT 452

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L++G      +  A E F  M   G      ++N  I     +  + KA RLR +    
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE 512

Query: 542 GTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
           G S  T TY  ++ GL K   L  AKDL +   +M+  G   D   Y  LI +  E+  L
Sbjct: 513 GISSDTVTYNILIDGLCKTGNLNDAKDLQM---KMVHNGLQPDCITYTCLIHAHCERGLL 569

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           ++   FF  M+  GL P   T    +H       L+       K++ +    +   YN+L
Sbjct: 570 REARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 629

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV--GEEIDSRRFAFD 710
           I+ L + G T  A      ML +G VP+  T+ LL+  +   G   D+ RF F+
Sbjct: 630 IHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFE 683



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/436 (22%), Positives = 190/436 (43%), Gaps = 8/436 (1%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           L ++++ + +I  L    DL  A ++ + + + K+   ++ TY  +I  L   G V++ +
Sbjct: 271 LPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA--SSFTYNPLITGLLAKGFVKKAD 328

Query: 117 GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
            L   M  E          +++   +   +V  A    V M + G +  V  +N +L   
Sbjct: 329 DLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGY 388

Query: 177 VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
            +      + + ++ ++  AG+ P V T N L++       +E A      M ++GC P+
Sbjct: 389 CKAG-SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 447

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
             T+ I++KG      +  +     EM   G+Q +   Y   I        + +A RL +
Sbjct: 448 VCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLRE 507

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           +M    +  D +TY  LI+ LC+   L+DA D+   M+  GL P    +  ++   CE G
Sbjct: 508 VMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERG 567

Query: 357 KFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWN 411
              E+  F +D      +P    +   +   C  G  + A     KM +  +   + ++N
Sbjct: 568 LLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 627

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
           + I  LC     + AY     M+   +VP+  TY+  + G CK  N+EDA+R + ++   
Sbjct: 628 VLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQN 687

Query: 472 SLVLDSISYSKLVEGL 487
            +  D +++  L +G 
Sbjct: 688 GIHPDYLTHKALFKGF 703



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 7/161 (4%)

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
            ++ E R F      +K+M+  G+ P+  T    +        + SA   FR+M ++G  
Sbjct: 567 GLLREARKF------FKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVE 620

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN  T+ ++I  L    R   +     EM + G+      YT +I   C+E   E+A+R 
Sbjct: 621 PNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRF 680

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           +  M    + PD LT++ L     E   ++ A + LE+ ++
Sbjct: 681 YFEMHQNGIHPDYLTHKALFKGFDEG-HMNHAIEYLENAVL 720


>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
 gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 198/451 (43%), Gaps = 17/451 (3%)

Query: 142 VNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFV---YKEMVKAGI 198
           + H R + A      M   GF LS   ++  +  + + K    +F F+    K+M K   
Sbjct: 55  IRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTK----EFTFIDNLLKDMEKLHC 110

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VP++   N  L +LF  NR ESAL+ F RM ++G  P+  TF I+I GL    + D +V 
Sbjct: 111 VPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQ 170

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP-DELTYEELINCL 317
               M D GI+ +      +   LC   +++ A  L   + +  L     L Y  LI+  
Sbjct: 171 FWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGF 230

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-- 375
           C   R+D A  ++  M   G  P    +  ++   C    F+E+V  L+        P  
Sbjct: 231 CRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDV 290

Query: 376 --HNALLECCCNAG---KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
             +N LL+  C A    K +L   ++ KM  +   D  S+N  I+  C     R+AY+L 
Sbjct: 291 YSYNQLLKAHCKANHPDKAYLF--MVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLF 348

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    + PD  T++  +    +  N + A ++   ++   L+ D I Y+ +++  C+ 
Sbjct: 349 EEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKS 408

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+  A  +FC M + G +    S+N LI G C   +V + + L       G+     TY
Sbjct: 409 GKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTY 468

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
             I+  LV+  +  D   V  QM+  G  LD
Sbjct: 469 KLIIGALVRENKLSDACRVWDQMMERGLTLD 499



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 212/492 (43%), Gaps = 11/492 (2%)

Query: 180 KRGFADF-VFVYKEMVKAGI-VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           K G  D+ V V+ EM  +   V  +D  N  + VL   +R + A   + +M   G   +S
Sbjct: 21  KAGLIDYAVKVFDEMTLSECRVFGID-YNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSS 79

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
            T+   I GL          ++L +M  L    ++  +   + +L REN+ E A+ +F  
Sbjct: 80  FTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGR 139

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
           M      PD +T+  +I+ LC+  + D A     +M+  G+ P +   V +  GLC+ G+
Sbjct: 140 MVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQ 199

Query: 358 FDES----VNFLEDKCGYVTS-PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
            D +    +  +      V++  +NAL+   C AG+   A  ++  M+      D  ++N
Sbjct: 200 VDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYN 259

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS-A 470
           + + + C      +A +LL +M  S++ PD  +Y+  +   CK  N+ D   +F      
Sbjct: 260 VLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCK-ANHPDKAYLFMVTKMV 318

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                D +SY+ +++  C +     A ++F  M + G +    +F ILI         D 
Sbjct: 319 PKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDM 378

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A +L  L    G       YT I+    K  + +    +   M+ +G   DV +Y  LI 
Sbjct: 379 AKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALIN 438

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
              +  ++ +    +  M++ G  PD  T   ++  L   ++L       ++++     L
Sbjct: 439 GFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTL 498

Query: 651 DSSMYNILINGL 662
           D  +  +LIN +
Sbjct: 499 DRGISEMLINAI 510



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 114/490 (23%), Positives = 205/490 (41%), Gaps = 16/490 (3%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I+ A+  F  M    C      +   I  LI +SR D +     +M  LG  L    Y+ 
Sbjct: 25  IDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSR 84

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            I  LC+  +      L K M  L  +PD   +   +N L    R + A ++   M+  G
Sbjct: 85  FISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERG 144

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAK 393
             P    F  I+ GLC++ KFD +V F  +       P N    AL    C+ G+  LA 
Sbjct: 145 REPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAY 204

Query: 394 CILEKMADRKIADCDS--WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            ++  +    +++  +  +N  I   C    I KA  ++  M  +   PD  TY+  +  
Sbjct: 205 ELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNY 264

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA--VEVFCCMSKNGCS 509
            C    +E+A+++ +++   ++  D  SY++L++  C+     +A    V   + K  C 
Sbjct: 265 CCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCD 324

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDL 566
           + S  +N +I   C +    +A +L       G +    T+T ++   ++      AK L
Sbjct: 325 VVS--YNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKL 382

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           L ++A M   G   D   Y  +I    +  K++     F  MV+ G+ PD  +  +L++G
Sbjct: 383 LDLMAGM---GLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALING 439

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                ++  V     +++      D   Y ++I  L +E   S A  + D M+ +G   D
Sbjct: 440 FCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLD 499

Query: 687 ATTHGLLVGS 696
                +L+ +
Sbjct: 500 RGISEMLINA 509



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/467 (20%), Positives = 183/467 (39%), Gaps = 41/467 (8%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y   I    +   ++ A+++F  M   +     + Y   I  L  + R D A+     M 
Sbjct: 12  YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFF 390
            +G + +   +   + GLC+  +F    N L+D     C       N  L       +  
Sbjct: 72  PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131

Query: 391 LAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +  +M +R +  D  ++ I I  LC+ ++   A +    M+   + PD     A  
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALA 191

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLV-LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           +G C     + A  +   V +  L  + ++ Y+ L+ G C+  +I +A+ +   MS+ GC
Sbjct: 192 VGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGC 251

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA-KDLL 567
                ++N+L+   C     ++A++L      S       +Y +++    K     K  L
Sbjct: 252 KPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYL 311

Query: 568 VVLAQMLVEG--------------CAL--------------------DVEAYCILIQSMS 593
            ++ +M+ +G              C++                    DV  + ILI++  
Sbjct: 312 FMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFL 371

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
            +          ++M   GL+PDR    +++       ++ +  S    +V      D  
Sbjct: 372 REGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVV 431

Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
            YN LING  K     +  +L + ML +G  PD  T+ L++G+ V E
Sbjct: 432 SYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRE 478


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 212/496 (42%), Gaps = 41/496 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M   G  P+V     L+    +  R ++A      + + G   +  ++ ++I G   +  
Sbjct: 105 MTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGE 164

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +++++ +L  M   G+    + Y  ++  LC   KL++A+++          PD +T   
Sbjct: 165 IEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTV 221

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+  C+   +  A  +  +M   G  P    +  +++G C+ G+ DE++ FL+    Y 
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
             P    HN +L   C+ G                           RW+        A +
Sbjct: 282 CQPDVISHNMILRSLCSGG---------------------------RWM-------DAMK 307

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL  M+    +P   T++  +   C+      AL V   +       +S S++ L++G C
Sbjct: 308 LLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 367

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
             + I  A+E    M   GC     ++NIL+  LC   KVD A+ + S   S G S +  
Sbjct: 368 NGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI 427

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           +Y  ++ GL+K+ +A+  + +L +M  +G   D+     ++  +S + K+++   FF+ +
Sbjct: 428 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL 487

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
            +  + P+     S++ GL    Q  L    +  +V+       + Y  LI G+  EGL 
Sbjct: 488 KRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLA 547

Query: 669 SQASYLLDLMLGKGWV 684
             AS L + +  +G V
Sbjct: 548 EDASKLSNELYSRGLV 563



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 189/411 (45%), Gaps = 9/411 (2%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  +     +  A+RVL  M   G   +   ++ VL ++ +  +     + V    +++
Sbjct: 155 LISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGK-LKQAMQVLGRQLQS 210

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
              P+V T   L++   + + +  A+  F  M  KGC P+  T+ ++IKG     R+D++
Sbjct: 211 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEA 270

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +  L ++   G Q ++  +  I+  LC   +  +A++L   M     +P  +T+  LIN 
Sbjct: 271 IRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINF 330

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           LC+   L  A ++LE M   G TP    F  +++G C     D ++ +LE        P 
Sbjct: 331 LCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPD 390

Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLG 431
              +N LL   C  GK   A  IL +++ +  +    S+N  I  L +  +   A ELL 
Sbjct: 391 IVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLE 450

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    + PD  T ++ V G  +     +A++ F  +   ++  ++  Y+ ++ GLC+ +
Sbjct: 451 EMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQ 510

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           + + A++    M   GC  + +++  LI G+      + A +L +  YS G
Sbjct: 511 QTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 209/456 (45%), Gaps = 8/456 (1%)

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           ++ LI N  +++    L  M + G   ++   T +I   C+  + + A ++  ++     
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           + D  +Y  LI+  C++  +++A  +L+ M   G++P    +  ++  LC+ GK  +++ 
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 364 FL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
            L    + KC         L++  C       A  +  +M ++    D  ++N+ I+  C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
           +   + +A   L ++      PD  +++  +   C    + DA+++   +  +  +   +
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
           +++ L+  LCQ   + +A+ V   M K+G + +S SFN LI G C  + +D+AI    + 
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            S G      TY  ++  L K  +  D +V+L+Q+  +GC+  + +Y  +I  + +  K 
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
           +        M   GL PD  T  S++ GL+   ++       + L   +   ++ +YN +
Sbjct: 443 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSI 502

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           I GL K   TS A   L  M+ KG  P   T+  L+
Sbjct: 503 ITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 40/251 (15%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E+  R    ++ +    D I+ + L+   C++ +   A ++   + ++G  +  +S+N+L
Sbjct: 96  EEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVL 155

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C   ++++A+R+       G S   +TY  ++  L    + K  + VL + L   C
Sbjct: 156 ISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKC 212

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV    +LI +  +++ +      FN M   G  PD  T                   
Sbjct: 213 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVT------------------- 253

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-- 696
                           YN+LI G  K G   +A   L  +   G  PD  +H +++ S  
Sbjct: 254 ----------------YNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLC 297

Query: 697 SVGEEIDSRRF 707
           S G  +D+ + 
Sbjct: 298 SGGRWMDAMKL 308



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 9/234 (3%)

Query: 106 LGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
           LG A NV EM      M K  + PN R +   L+  F N   ++ A+  L  M S G   
Sbjct: 337 LGKALNVLEM------MPKHGHTPNSR-SFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            +  +N++L A+ ++ +   D V +  ++   G  P++ + N +++ L +  + E A++ 
Sbjct: 390 DIVTYNILLTALCKDGK-VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 448

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M  KG  P+  T   V+ GL    +V +++     +    I+     Y  II  LC+
Sbjct: 449 LEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCK 508

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
             +   AI     M A    P E TY  LI  +      +DA+ +  ++   GL
Sbjct: 509 SQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562


>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
           [Vitis vinifera]
          Length = 763

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/556 (20%), Positives = 250/556 (44%), Gaps = 24/556 (4%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           TT  +  I+SL        +  VL  + +   AL+ F+WV     F+H  DT+ K+I  L
Sbjct: 103 TTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEIL 162

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G A  +     +  +M K+      +  + L+ S+     V  +++V   M   G + ++
Sbjct: 163 GRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTI 222

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
             ++ +   I+   R      + +  M+  G++P   T N ++   F + ++E+A   F 
Sbjct: 223 KSYDALFKVILRRGRYMMAKRY-FNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFE 281

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M ++   P+  T+  +I G     +++++     EM    I+  +  YT +I       
Sbjct: 282 EMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVG 341

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD-VF 345
           ++++ +RLF+ M++  + P+ +TY  L+  LC+  ++ +A +++++M+   + P D+ +F
Sbjct: 342 RVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIF 401

Query: 346 VDIVRGLCEVGKFDESVNFLE--------DKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           + ++   C+ G+ D + + L+         + G+    +  L+E  C +G +  A  +L+
Sbjct: 402 MRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGH----YGVLIENFCKSGVYDRAVKLLD 457

Query: 398 KMADRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           K+ +++I          +   +N+ I +LC + +  KA E L R ++   V D   ++  
Sbjct: 458 KLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKA-ETLFRQLMKKGVQDPIAFNNL 516

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  K    E A  + + +  + +  ++ +Y  L+E   +  +  +A      M +NG 
Sbjct: 517 IRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGH 576

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
              SS F  ++  L    ++  A R+ +     G         KI+  L+     ++ L 
Sbjct: 577 IPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALG 636

Query: 569 VLAQMLVEGCALDVEA 584
            +  ++  GC  D + 
Sbjct: 637 RIDLLMNNGCEPDFDG 652



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/534 (20%), Positives = 226/534 (42%), Gaps = 21/534 (3%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFR 226
           V+NV+ G+     R     +  ++ + +AG+   + DT   ++E+L   +++  A     
Sbjct: 122 VWNVLHGS-----RNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILL 176

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M KKG   +   F ++I        V +SV +  +M +LG++  +  Y  +  ++ R  
Sbjct: 177 DMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRG 236

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +   A R F  M    +MP   TY  +I     +L+++ AN   E+M    ++P    + 
Sbjct: 237 RYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYN 296

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++ G   + K +E+  F  +  G    P    +  +++   + G+      + E+M   
Sbjct: 297 TMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSF 356

Query: 403 KI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP-DCATYSAFVLGKCKLCNYED 460
            I  +  +++  +  LC+ E++ +A  ++  MV   + P D + +   +  +CK    + 
Sbjct: 357 GIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDA 416

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF--------CCMSKNGCSLSS 512
           A  V + +   S+  ++  Y  L+E  C+      AV++             +N   + S
Sbjct: 417 AADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMES 476

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           S +N++I  LC   +  KA  L       G     + +  ++ G  K    +    +L  
Sbjct: 477 SGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIA-FNNLIRGHSKEGAPESAFEILKI 535

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M       + +AY +LI+S  ++ +  D     + M++ G +PD     S++  L +  +
Sbjct: 536 MGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGR 595

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           +   S  +N +V      +  +   ++  L   G   +A   +DL++  G  PD
Sbjct: 596 IQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD 649



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 108/515 (20%), Positives = 215/515 (41%), Gaps = 42/515 (8%)

Query: 231 KGCCPNSRTFEIVIKGLIAN----SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +G   N    E +I  ++AN    +R+ +S+  L   FD         ++ +  +L    
Sbjct: 80  RGKLRNPEKIEDIICRMMANRAWTTRLQNSIRSLVPQFD---------HSLVWNVLHGSR 130

Query: 287 KLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             + A++ F+ + RA     D  T+ ++I  L    +L+ A  IL DM   G+   +D+F
Sbjct: 131 NSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLF 190

Query: 346 VDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
           V ++    + G   ESV   +             ++AL +     G++ +AK     M +
Sbjct: 191 VLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLN 250

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +   C ++NI I     + ++  A      M    + PD  TY+  + G  ++   E+
Sbjct: 251 EGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEE 310

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A + F ++  +++    ISY+ +++G   V ++ + + +F  M   G   ++ +++ L+ 
Sbjct: 311 AEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLP 370

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ-RAKDLLV---VLAQMLVE 576
           GLC     +K +  +++       Y       I + L+  Q +A  L     VL  M+  
Sbjct: 371 GLC---DGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRL 427

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL--------LHGLA 628
               +   Y +LI++  +           + +++  ++   +  L +        +  L 
Sbjct: 428 SIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLC 487

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP-DA 687
           +  Q     +   +L+    V D   +N LI G  KEG    A  +L +M G+  VP +A
Sbjct: 488 NSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGAPESAFEILKIM-GRREVPREA 545

Query: 688 TTHGLLVGS--SVGEEIDSRRF---AFDSSSFPDS 717
             + LL+ S    GE  D++       ++   PDS
Sbjct: 546 DAYRLLIESFLKKGEPADAKTALDGMIENGHIPDS 580


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 190/421 (45%), Gaps = 58/421 (13%)

Query: 168 VFNVVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
            +NV++  +   KRG A D + ++ EM++ GI PNV T   LL  +    +++ A +   
Sbjct: 211 TYNVLMDGLC--KRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLN 268

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCIIPML--- 282
            M  KGC P+  T+   + GL    RVD+++  L  +   G   L L  Y+C+I  L   
Sbjct: 269 SMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLA 328

Query: 283 --------------------------------CRE-NKLEEAIRLFKMMRALDLMPDELT 309
                                           C E  ++++A   F  M+     PD   
Sbjct: 329 GRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFC 388

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN----FL 365
           Y  L+  LC++  LD A  ++ +M    +    +    ++ GLC+    DE++      +
Sbjct: 389 YNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMV 448

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM--------------ADRKIADCDSWN 411
           E  C      +N L++    A +   A+ +  KM                 ++ D +S  
Sbjct: 449 EVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQ 508

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             +  +C++ ++ KAY+LL  ++ S VVPD  TY+  + G CK+ N + ALR+FR++  +
Sbjct: 509 KLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 568

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
              LD I+Y  L++ L +  +  +A+ +F  +   G + S S +N ++  LC M K+ +A
Sbjct: 569 GFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQA 628

Query: 532 I 532
           I
Sbjct: 629 I 629



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 225/524 (42%), Gaps = 59/524 (11%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIES-ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           G  P     N +L VL  +  +   AL  + RM   GC PN  T+ +++ GL       D
Sbjct: 168 GCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVD 227

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +  EM   GI   +  +T ++  +C   +L+EA  L   M      PDE+TY   ++
Sbjct: 228 ALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLS 287

Query: 316 CLCENLRLDDANDILEDM-----IVIGL-------------------------------- 338
            LC+  R+D+A + LE +      V+GL                                
Sbjct: 288 GLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADF 347

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
           +P   ++  ++RG  E G+ D++  F ++      +P    +N LL+  C++G    A+ 
Sbjct: 348 SPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARS 407

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           ++ +MA   +  D ++  I I  LC+ + + +A ++   MV     P   TY+  + G  
Sbjct: 408 LMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLY 467

Query: 454 KLCNYEDALRVF-------------RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +    E+A  +F             R     + V DS S  KLV+ +CQ  ++ +A ++ 
Sbjct: 468 RAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLL 527

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +  +G      ++N L+ GLC +R +D A+RL       G S    TY  ++  L++ 
Sbjct: 528 RGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRA 587

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF--NVMVKAGLVPDRE 618
            R  D + +   +L  G    +  Y  +++S+   NKL     F+  +++ K  L    E
Sbjct: 588 HRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDE 647

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
            + S      +GS    V   I K+  +   ++S  Y I + GL
Sbjct: 648 VIASARKKFEEGSLDEAVRELI-KIDQEYGSVNSCPYTIWLIGL 690



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 208/516 (40%), Gaps = 78/516 (15%)

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIVIKGLIANSRVD 254
           AG+ P       L+       R   A+D F RM  + GC P +  +  V++ L+A+  V 
Sbjct: 131 AGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGV- 189

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
                                   +P+         A+ L+  M A   +P+  TY  L+
Sbjct: 190 ------------------------VPL---------ALALYNRMVAAGCLPNRATYNVLM 216

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---EDK-CG 370
           + LC+     DA  + ++M+  G+TP       ++  +C  G+  E+ N L   EDK C 
Sbjct: 217 DGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCP 276

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADR-------KIADC--DSWNIPIRWLCENE 421
                +NA L   C AG+   A   LE +          K   C  D   +  R+    E
Sbjct: 277 PDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRY----E 332

Query: 422 EIRKAY-ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           E  + Y E+L +   S   PD   Y+  + G  +    +DA   F ++  +    D+  Y
Sbjct: 333 EGFQCYMEVLEQADFS---PDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCY 389

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L++ LC    +  A  +   M++N   L +++  I+I+GLC  + VD+A+++      
Sbjct: 390 NTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVE 449

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G   T  TY  ++ GL +  R ++  ++  +M V                        +
Sbjct: 450 VGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVG----------------------NN 487

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
            +LF  + + A  V D E++  L+  +    Q+      +  ++    V D   YN L+N
Sbjct: 488 PSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLN 547

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           GL K      A  L   +  KG+  D  T+G L+ S
Sbjct: 548 GLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDS 583



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 168/390 (43%), Gaps = 41/390 (10%)

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-----EDKCGYVTSPHNALLEC 382
           D + D    GL P    F  ++      G+  E+V+       E  C   T  +NA+L  
Sbjct: 123 DAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRV 182

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
              +G                        +P+           A  L  RMV +  +P+ 
Sbjct: 183 LVASGGV----------------------VPL-----------ALALYNRMVAAGCLPNR 209

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
           ATY+  + G CK     DAL++F ++  + +  +  +++ L+  +C   ++ EA  +   
Sbjct: 210 ATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNS 269

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAI-RLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
           M   GC     ++N  + GLC   +VD+AI RL +L  +         Y+ ++ GL    
Sbjct: 270 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAG 329

Query: 562 RAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           R ++      ++L +   + D+  Y I+I+  +E  ++ D   FF+ M +    PD    
Sbjct: 330 RYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCY 389

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +LL  L D   L    S ++++  ++ VLD++ + I+I+GL K+ L  +A  + D M+ 
Sbjct: 390 NTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVE 449

Query: 681 KGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
            G  P   T+ +L+ G      ++  R  F
Sbjct: 450 VGCHPTVMTYNVLIDGLYRAHRLEEARMLF 479



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 97/447 (21%), Positives = 195/447 (43%), Gaps = 45/447 (10%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  MI     AG +++       M ++R+        +L+ +  +   ++GA  ++  M 
Sbjct: 354 YTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMA 413

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
                L  +   +++  + + K+   + + V+  MV+ G  P V T N L++ L+  +R+
Sbjct: 414 QNNVVLDTNTHTIMIHGLCK-KQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRL 472

Query: 219 ESALDQFRRMHKKGCCP--------------NSRTFEIVIKGLIANSRVDDSVSILGEMF 264
           E A   F +M + G  P              +S + + ++  +  + +V  +  +L  + 
Sbjct: 473 EEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIM 531

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           D G+  ++  Y  ++  LC+   L+ A+RLF+ ++      DE+TY  LI+ L    R +
Sbjct: 532 DSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYN 591

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCC 384
           DA  + +D++ IG TP+  ++  I+R LC + K  +++NF  D           LL+   
Sbjct: 592 DAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDH----------LLK--- 638

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
              K+ L+       + RK  +  S +  +R L +   I + Y           V  C  
Sbjct: 639 ---KYNLSAQDEVIASARKKFEEGSLDEAVRELIK---IDQEY---------GSVNSC-P 682

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+ +++G  +    +DAL++F  +    + +     + L + LC  + +  AV+V     
Sbjct: 683 YTIWLIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTL 742

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKA 531
                +S    N L+  LC+  +   A
Sbjct: 743 NKRFIMSRHVGNRLLSSLCIRHRRKDA 769



 Score = 42.7 bits (99), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 40/202 (19%), Positives = 87/202 (43%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+ S +  +R N AM +  ++   G   S+ ++N ++ ++    +      F +  ++K
Sbjct: 579 TLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLK 638

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
              +   D +       FE   ++ A+ +  ++ ++    NS  + I + GLI   R+DD
Sbjct: 639 KYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDD 698

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ I   + + GI +  +    +   LC E  L+ A+ +         +        L++
Sbjct: 699 ALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGNRLLS 758

Query: 316 CLCENLRLDDANDILEDMIVIG 337
            LC   R  DA  +   M ++G
Sbjct: 759 SLCIRHRRKDAQALAWRMHLVG 780


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  M   GI  ++ T N ++  L   +R   AL    +M K G  P+  T   +I G  
Sbjct: 91  LFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             +RV  +V ++ +M ++  +L++  Y  II   C+   +  A+ LF  M    +  D +
Sbjct: 151 QGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTV 210

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  L+  LC + R  DA  ++ DM++  + P    F  ++      GKF E+  F E+ 
Sbjct: 211 TYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEE- 269

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                                 + +CI          D  ++N  I  LC + ++ +A +
Sbjct: 270 ---------------------MIRRCI--------DPDVFTYNSMIHGLCMHGQVDEAKQ 300

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +L  MV     PD  TY+  + G CK    ++  ++ R++S + LV+D+++++ +++G  
Sbjct: 301 ILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYF 360

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           Q  +   A E+F   S+ G   +  +++IL+YGLC   +V+KA+ L      S      +
Sbjct: 361 QAGRPDAAQEIF---SRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDIT 417

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  ++ G+  +   +D   +   +  +G   DV  Y  +I     +         +  M
Sbjct: 418 TYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKM 477

Query: 609 VKAGLVP 615
            + GL+P
Sbjct: 478 QEDGLLP 484



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 194/430 (45%), Gaps = 11/430 (2%)

Query: 108 LAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           L+ N++E   L  NM++ R  P++ E    L+ +       +  + +  NM   G    +
Sbjct: 46  LSMNLDEAIDLFCNMIQSRPLPSIVE-FSKLLSNIAKSKNYDLVISLFHNMEICGIGHDL 104

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
             +N+V+  +    R F   + V  +M+K G  P+V T++ L+    + NR+  A+D   
Sbjct: 105 YTYNIVINCLCRCSR-FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVS 163

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M +  C  +   +  +I G      V++++ + G M   G++ +   Y  ++  LC   
Sbjct: 164 KMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSG 223

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +  +A RL + M   D++P+ +T+  LIN      +  +A    E+MI   + P    + 
Sbjct: 224 RRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYN 283

Query: 347 DIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
            ++ GLC  G+ DE+   L+      C      +N L+   C   +      ++ +M+ R
Sbjct: 284 SMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR 343

Query: 403 K-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
             + D  ++N  I+   +      A E+  RM      P+  TYS  + G C     E A
Sbjct: 344 GLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKA 400

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           L +F  +    + LD  +Y+ ++ G+C +  + +A ++FC +S  G      ++  +I G
Sbjct: 401 LVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISG 460

Query: 522 LCVMRKVDKA 531
            C  R  DKA
Sbjct: 461 FCRKRLWDKA 470



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 181/424 (42%), Gaps = 12/424 (2%)

Query: 213 FETNRI----ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           F T R+    + A+D F  M +    P+   F  ++  +  +   D  +S+   M   GI
Sbjct: 41  FTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGI 100

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             +L  Y  +I  LCR ++   A+ +   M      PD +T   LIN  C+  R+  A D
Sbjct: 101 GHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVD 160

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCC 384
           ++  M  +       ++  I+ G C+ G  + ++        D     T  +N+L+   C
Sbjct: 161 LVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLC 220

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            +G+   A  ++  M  R I  +  ++   I       +  +A +    M+   + PD  
Sbjct: 221 CSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVF 280

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY++ + G C     ++A ++   +  +    D ++Y+ L+ G C+ +++ E  ++   M
Sbjct: 281 TYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM 340

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           S+ G  + + +FN +I G     + D A  + S     G+     TY+ ++ GL    R 
Sbjct: 341 SQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFS---RMGSRPNIRTYSILLYGLCYNWRV 397

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           +  LV+   M      LD+  Y I+I  M     ++D    F  +   GL PD  T  ++
Sbjct: 398 EKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTM 457

Query: 624 LHGL 627
           + G 
Sbjct: 458 ISGF 461



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 178/412 (43%), Gaps = 8/412 (1%)

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L+EAI LF  M     +P  + + +L++ + ++   D    +  +M + G+      +  
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRK 403
           ++  LC   +F  +++ +     +   P     ++L+   C   + F A  ++ KM + +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
              D   +N  I   C+   +  A  L GRM    V  D  TY++ V G C      DA 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           R+ R +  + +V + I+++ L+    +  K  EA + +  M +        ++N +I+GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C+  +VD+A ++  L  + G      TY  ++ G  K +R  +   ++ +M   G  +D 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
             +  +IQ   +  +       F+ M   G  P+  T   LL+GL    ++         
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFES 406

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +      LD + YNI+I+G+   G    A  L   +  KG  PD  T+  ++
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMI 458



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 4/205 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S++     H +V+ A ++L  M + G    V  +N ++    + KR   +   + +EM +
Sbjct: 284 SMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKR-VDEGTKLVREMSQ 342

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+V +  T N +++  F+  R ++A + F RM   G  PN RT+ I++ GL  N RV+ 
Sbjct: 343 RGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEK 399

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +   M    ++L+++ Y  +I  +C    +E+A  LF  +    L PD +TY  +I+
Sbjct: 400 ALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMIS 459

Query: 316 CLCENLRLDDANDILEDMIVIGLTP 340
             C     D A+ +   M   GL P
Sbjct: 460 GFCRKRLWDKADFLYRKMQEDGLLP 484



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 126/316 (39%), Gaps = 48/316 (15%)

Query: 457 NYEDALRVFRQVSAQSLVLDSI-SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           N ++A+ +F  +  QS  L SI  +SKL+  + + +     + +F  M   G      ++
Sbjct: 49  NLDEAIDLFCNM-IQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY 107

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           NI+I  LC   +   A+ +       G      T + ++ G  +  R    + ++++M  
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE 167

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL------AD 629
             C LDV  Y  +I    +   + +  + F  M + G+  D  T  SL+ GL      +D
Sbjct: 168 MRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSD 227

Query: 630 GSQLH-------------LVSSGINKLVSDSEVLDSS----------------MYNILIN 660
            ++L                ++ IN  V + + L++                  YN +I+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIH 287

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-----------GSSVGEEIDSRRFAF 709
           GL   G   +A  +LDLM+ KG  PD  T+  L+           G+ +  E+  R    
Sbjct: 288 GLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347

Query: 710 DSSSFPDSVSDILAEG 725
           D+ +F   +      G
Sbjct: 348 DTVTFNTIIQGYFQAG 363


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/561 (24%), Positives = 232/561 (41%), Gaps = 61/561 (10%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           VY+++ + G +PN  T   +++ L +   ++  L  F  M + G  P+S  F   I+GL 
Sbjct: 217 VYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLC 276

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
            N R D    +L         LE+  YT ++   C E KL+EA  +F  M    ++PD  
Sbjct: 277 NNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVY 336

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG----------KF 358
            Y  LI+  C++  L  A  + ++MI  G+     V   I+  L E+G          + 
Sbjct: 337 VYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKEL 396

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWL 417
            ES  FL D   Y     N + +  C  GK   A  ++E+M  +++  D   +   I   
Sbjct: 397 KESGMFL-DGVAY-----NIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGY 450

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C   ++  A+ +   M    + PD  TY+    G  +  +  + +++   + +Q +  +S
Sbjct: 451 CLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNS 510

Query: 478 ISYSKLVEGLCQVEKITEA-----------VEVFCCMSKNGCS--LSSSSFNI------- 517
            ++  ++EGLC   K+ EA           +E++  M    C   L   S+ +       
Sbjct: 511 TTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQ 570

Query: 518 -----------LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
                      L+  LC+   ++KA++L      S    +   Y+KI+  L +    K+ 
Sbjct: 571 GDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNA 630

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             +    +  G   DV  Y I+I S    N L++    F  M + G+ PD  T   LL G
Sbjct: 631 RTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDG 690

Query: 627 ---------LADGSQLHLVSSGINKLVSDSEVL----DSSMYNILINGLWKEGLTSQASY 673
                     +   +    S  ++ ++ D E +    D   Y +L++G  K     QA  
Sbjct: 691 SLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVS 750

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           L D M+  G  PD  T+  LV
Sbjct: 751 LFDKMIESGLEPDTITYTALV 771



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 259/611 (42%), Gaps = 47/611 (7%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG--LCQNMV 123
           +I+ L    DL   L +F+ +   +R      +YC      GL  N     G  + Q   
Sbjct: 236 VIKALCKKGDLKQPLCVFEEM---ERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFR 292

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK--- 180
           K   P    A  ++V  F N  +++ A  V  +M   G    V V++ ++    +     
Sbjct: 293 KGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLL 352

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R  A    ++ EM+  G+  N   ++ +L  L E       +DQF+ + + G   +   +
Sbjct: 353 RALA----LHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAY 408

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            IV   L    +V+D+V ++ EM    + L++  YT +I   C +  L  A  +FK M+ 
Sbjct: 409 NIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKE 468

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
             L PD +TY  L   L  N    +   +L+ M   G+ P       I+ GLC  GK  E
Sbjct: 469 KGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLE 528

Query: 361 S---VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR----KIADCDSWNIP 413
           +    N LEDK   + S   A++   C       +  +  K+ ++    K A C      
Sbjct: 529 AEVYFNSLEDKNIEIYS---AMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKL--- 582

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +  LC   +I KA +LL RM++S+V P    YS  +   C+  + ++A  +F     +  
Sbjct: 583 LSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGF 642

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D ++Y+ ++   C++  + EA ++F  M + G      +F +L+ G  +   + K   
Sbjct: 643 TPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDG-SLKEYLGKRFS 701

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                 S G   TTS Y   +L        +D    + QM +     DV  Y +L+    
Sbjct: 702 ------SHGKRKTTSLYVSTIL--------RD----MEQMKINP---DVVCYTVLMDGHM 740

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           + +  +     F+ M+++GL PD  T  +L+ GL +   +    + +N++ S     D  
Sbjct: 741 KTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVH 800

Query: 654 MYNILINGLWK 664
           + + L  G+ K
Sbjct: 801 IISALKRGIIK 811



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 129/628 (20%), Positives = 260/628 (41%), Gaps = 56/628 (8%)

Query: 74  NDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
           N+ S AL  F  +     F HT  TY  +I  L       +++ L  +++   +P +   
Sbjct: 79  NNPSHALSFFTHLR-HTGFSHTISTYAAIIKILSFWNLQRQLDTLFLHLINRDHPPLPFP 137

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
           L++L  +    +  +      +     GF  +    N+   AI        DF+F   + 
Sbjct: 138 LLNLFETLFQDFNTSHKNNYFLLRAFNGFVKTCVSLNMFDKAI--------DFLF---QT 186

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            + GI+P+V T N+L   L E   ++ AL  + ++ + G  PN  T+ IVIK L     +
Sbjct: 187 RRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDL 246

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
              + +  EM  +G+      +   I  LC  ++ +    + +  R  +   +   Y  +
Sbjct: 247 KQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAV 306

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           +   C  ++LD+A  + +DM   G+ P   V+  ++ G C+      ++   ++      
Sbjct: 307 VRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGV 366

Query: 374 SPHNALLECCCNA-GKFFLAKCILEKMADRK----IADCDSWNIPIRWLCENEEIRKAYE 428
             +  ++ C  +  G+  +   ++++  + K      D  ++NI    LC   ++  A E
Sbjct: 367 KTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVE 426

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           ++  M    +  D   Y+  + G C   +   A  +F+++  + L  D ++Y+ L  GL 
Sbjct: 427 MVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLS 486

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +     E V++   M   G   +S++  ++I GLC   KV +A     + ++S       
Sbjct: 487 RNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEA----EVYFNSLEDKNIE 542

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
            Y+ ++ G  +    K    V  ++L +G                +  K   C   F ++
Sbjct: 543 IYSAMVNGYCETDLVKKSYEVFLKLLNQG----------------DMAKKASC---FKLL 583

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
            K  +  D E  + LL  +       L+S+     V  S++    MY+ ++  L + G  
Sbjct: 584 SKLCMTGDIEKAVKLLDRM-------LLSN-----VEPSKI----MYSKILAALCQAGDM 627

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGS 696
             A  L D+ + +G+ PD  T+ +++ S
Sbjct: 628 KNARTLFDVFVHRGFTPDVVTYTIMINS 655



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 161/360 (44%), Gaps = 26/360 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++KEM + G+ P++ T N L   L         +     M  +G  PNS T +++I+GL 
Sbjct: 462 MFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLC 521

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDE 307
           +  +V ++      + D  I++    Y+ ++   C  + ++++  +F K++   D M  +
Sbjct: 522 SGGKVLEAEVYFNSLEDKNIEI----YSAMVNGYCETDLVKKSYEVFLKLLNQGD-MAKK 576

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            +  +L++ LC    ++ A  +L+ M++  + P+  ++  I+  LC+ G    +    + 
Sbjct: 577 ASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDV 636

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                 +P    +  ++   C       A  + + M  R I  D  ++ + +    + E 
Sbjct: 637 FVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLK-EY 695

Query: 423 IRKAYELLGR-----MVVSSVV---------PDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           + K +   G+     + VS+++         PD   Y+  + G  K  N++ A+ +F ++
Sbjct: 696 LGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKM 755

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               L  D+I+Y+ LV GLC    + +AV +   MS  G +      + L  G+   RKV
Sbjct: 756 IESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKV 815



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 18/184 (9%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           VFV++     G  P+V T   ++      N ++ A D F+ M ++G  P+  TF +++ G
Sbjct: 636 VFVHR-----GFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDG 690

Query: 247 LIA----------NSRVDDSV---SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            +             R   S+   +IL +M  + I  ++  YT ++    + +  ++A+ 
Sbjct: 691 SLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVS 750

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           LF  M    L PD +TY  L++ LC    ++ A  +L +M   G+TP   +   + RG+ 
Sbjct: 751 LFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGII 810

Query: 354 EVGK 357
           +  K
Sbjct: 811 KARK 814


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 221/533 (41%), Gaps = 67/533 (12%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           ++ L+P  +++V  N  +   AL +F    I  R       +  ++L     G V++   
Sbjct: 101 KYTLTP--VLQVYCNMAEFDKALDVFN--EIHDRGWVDEYVFSILVLAFSKWGKVDKACE 156

Query: 118 LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA-- 175
           L + M ++     ++   SL++ FV   RV+ A+ +   M   GF   + +++V++G   
Sbjct: 157 LIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLC 216

Query: 176 ----------IVEEKRGF---ADFVFVYK---------------EMVKAGIVPNVDTL-- 205
                     +  E +GF    D   V K               E +   + P   TL  
Sbjct: 217 VNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLY 276

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCC----------------PNSRTFEIVIKGLIA 249
           N +L  L +   +  A    + +    C                 PNS TF IVI GLI 
Sbjct: 277 NSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIK 336

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +D +V +  +M  +G + +L  Y  +I  LC  N+L+E+  L + M    + P   T
Sbjct: 337 TGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFT 396

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
              +  CLC    +  A  +L+ M + G  P       +V+ LC+ GK  E+  FL D  
Sbjct: 397 NNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMA 456

Query: 370 GYVTSPHNALLECCCN----------AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
                P       C +          A K F   C     A     D  ++NI I+ LC+
Sbjct: 457 EEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDIC-----AQGYCPDVIAYNILIKGLCK 511

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
            + I +A  LL  M    +VP   TY+  + G CK  + E+A+     +  +    + I+
Sbjct: 512 TQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVIT 571

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           YS L+ GLC   +  +A+ ++  M + GC+ SS ++   I+GL    + ++A+
Sbjct: 572 YSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEAL 624



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 142/624 (22%), Positives = 257/624 (41%), Gaps = 89/624 (14%)

Query: 143 NHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVF------------- 188
           + Y +   ++V  NM    F  ++DVFN +        RG+ D +VF             
Sbjct: 100 DKYTLTPVLQVYCNMAE--FDKALDVFNEI------HDRGWVDEYVFSILVLAFSKWGKV 151

Query: 189 -----VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                + + M +  +  N  T   L+    + +R++ AL  F +M K G  P+   ++++
Sbjct: 152 DKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVI 211

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL----EE--------- 290
           I GL  N  V  ++ +  EM    IQ ++   T +I    +E +L    EE         
Sbjct: 212 IGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKA 271

Query: 291 -----------------AIRLFKMMRALDL-------------------MPDELTYEELI 314
                              + + +++A+ +                    P+  T+  +I
Sbjct: 272 STLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVI 331

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           N L +   LD A  +  DM  IG  P   ++ +++ GLC   +  ES   L++       
Sbjct: 332 NGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIE 391

Query: 375 P----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSW----NIPIRWLCENEEIRKA 426
           P    +N +  C C       A  +L+KM   +I     W       ++ LC++ +  +A
Sbjct: 392 PTSFTNNCIFGCLCRRHDISGALHLLKKM---RIHGHVPWIKHSTSLVKELCKHGKEVEA 448

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            + L  M      PD   YSA + G  K+   + AL++F+ + AQ    D I+Y+ L++G
Sbjct: 449 CKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKG 508

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+ ++I EA  +   M + G   S+ ++N LI GLC    +++A+   S+         
Sbjct: 509 LCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPN 568

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY+ ++ GL    R  D LV+  +M  +GC     AY   I  +S   +  +  ++  
Sbjct: 569 VITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLR 628

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI--NGLWK 664
            M +  + PD    + LL+     S   L    + ++V   +  D    N +   N + K
Sbjct: 629 EMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAILK 688

Query: 665 EGLTSQASYLLDLMLGKGWVPDAT 688
               ++ S  +  +L KG +P A+
Sbjct: 689 FSEDARTSSSIKNLLAKGSIPSAS 712



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 121/565 (21%), Positives = 232/565 (41%), Gaps = 61/565 (10%)

Query: 188 FVYKEMVKAGI-VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
            ++ ++ K G+ VPN  +   LLEVL ++  I+    + + MH  G   +  T   V++ 
Sbjct: 51  LLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQV 110

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
               +  D ++ +  E+ D G   E  F + ++    +  K+++A  L + M   ++  +
Sbjct: 111 YCNMAEFDKALDVFNEIHDRGWVDEYVF-SILVLAFSKWGKVDKACELIETMEEKNVRLN 169

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           + T+  LI    +  R+D A  + + M   G TP   ++  I+ GLC      +++    
Sbjct: 170 KKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYS 229

Query: 367 DKCGYVTSPHNALL-ECCCNAGKFFLAKCILEKMADRKIADCDS--WNIPIRWLCENEEI 423
           +  G+   P   ++ +   +  K     C  E+M +       +  +N  +  L +N  +
Sbjct: 230 EMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSV 289

Query: 424 RKAYELLGRMVVSS----------------VVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            KAY LL  + + +                V P+  T+S  + G  K  + + A+ +FR 
Sbjct: 290 HKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRD 349

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++      D + Y+ L++GLC   ++ E+  +   M ++G   +S + N +   LC    
Sbjct: 350 MARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHD 409

Query: 528 VDKAI----RLRSLAYSSGTSYTTS-------------------------------TYTK 552
           +  A+    ++R   +     ++TS                                Y+ 
Sbjct: 410 ISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSA 469

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            + GL+K+Q     L +   +  +G   DV AY ILI+ + +  ++ +     + M + G
Sbjct: 470 CLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKG 529

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
           LVP   T  +L+ GL     L      ++ ++      +   Y+ LINGL   G    A 
Sbjct: 530 LVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDAL 589

Query: 673 YLLDLMLGKGWVPD-----ATTHGL 692
            L + M  KG  P      A  HGL
Sbjct: 590 VLWNEMGRKGCTPSSIAYMAFIHGL 614



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 112/296 (37%), Gaps = 58/296 (19%)

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C +  ++ AL VF ++  +  V D   +S LV    +  K+ +A E+   M +    L+ 
Sbjct: 112 CNMAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNK 170

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +F  LIYG     +VDKA+ L      SG +   S Y  I+ GL   +  K  L + ++
Sbjct: 171 KTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSE 230

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML--SLLHGLADG 630
           M       DV+    LI S S++ +L     FF  M    + P   T+L  S+L+ L D 
Sbjct: 231 MKGFKIQPDVKIVTKLISSFSKEEEL---TCFFEEM-HEDMDPKASTLLYNSVLNSLVDN 286

Query: 631 SQLH-----LVSSGINKLVSDSEV------------------------------------ 649
             +H     L +  I   + D E+                                    
Sbjct: 287 GSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGL 346

Query: 650 ----------LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
                      D  +YN LI+GL       ++  LL  M   G  P + T+  + G
Sbjct: 347 FRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFG 402


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 219/499 (43%), Gaps = 5/499 (1%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MVK G++ +  + N LL  L     ++ AL     M K G  P+  T+  + KG +    
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGL 356

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +  +  ++ +M   G+  +L  YT +I   C+   +EEA++L +   +     + + Y  
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++CLC+  R+++A  + ++M  + L P   V+  ++ GLC+ G    +    E      
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 373 TSPHN----ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             PH+    A+L      G    A+   +      +  D   +NI I      + I +A 
Sbjct: 477 KFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAM 536

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L  +M+   + P   T++  + G C+  +  +A ++   +  + LV   ++Y+ L+   
Sbjct: 537 QLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAY 596

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+V  + E       M  N    +  ++ +LI GLC   K+ ++++L    Y+ G    +
Sbjct: 597 CEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDS 656

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  I+    K +     L +   ML+  C      Y +LI ++     LKD       
Sbjct: 657 VTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVS 716

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           +    +   + T ++++       Q+       N++++   V+    Y+ +IN L K GL
Sbjct: 717 IEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGL 776

Query: 668 TSQASYLLDLMLGKGWVPD 686
            ++A Y   +ML +G  PD
Sbjct: 777 ITEAKYFFVMMLSEGVTPD 795



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 224/515 (43%), Gaps = 49/515 (9%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           F  ++ +  + +   ++E  GF D      +M K G+ P+V T N L +       +  A
Sbjct: 307 FSYNILLHGLCVAGSMDEALGFTD------DMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
               ++M  +G  P+  T+  +I G      +++++ +  E    G +L + FY  ++  
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC+  ++EEA+ LF  M  L L PD + Y  LI+ LC+   +  A  + E M +    P 
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 342 DDVFVDIVRGLCEVGKFDESVNF---------LEDKC-------GYV------------- 372
                 ++ GL + G   E+ N+         +ED         GYV             
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYY 540

Query: 373 ------TSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
                  +P     N L+   C  G    A+ +LE +  +  +    ++   +   CE  
Sbjct: 541 KMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +++ +  L  M  ++VVP   TY+  + G C+     ++L++   + A+ L+ DS++Y+
Sbjct: 601 NMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            +++  C+ ++IT+A++++  M  + C  +  ++ +LI  LC+   +    R+       
Sbjct: 661 TIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDR 720

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
             +    TY  I+       +    L    QML +G  + +  Y  +I  + ++  + + 
Sbjct: 721 NITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA 780

Query: 602 ALFFNVMVKAGLVPDRE---TMLSLLHGLADGSQL 633
             FF +M+  G+ PD E   T+L+  H   + S +
Sbjct: 781 KYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSV 815



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 127/572 (22%), Positives = 241/572 (42%), Gaps = 59/572 (10%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
           L F++  H  ++ A+ V+  M    F+ SV  +N +L  +        D ++ VY E+  
Sbjct: 176 LAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRH-----TDIMWDVYNEIKV 230

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G   +  T + L+  L E +++E A+  F     K   P+  +   ++        +D 
Sbjct: 231 SGAPQSECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVGLIDV 289

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + S    M   G+  +   Y  ++  LC    ++EA+     M    + PD +TY  L  
Sbjct: 290 ARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAK 349

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVT 373
                  +  A  +++ M++ GL P    +  ++ G C++G  +E++   ++    G+  
Sbjct: 350 GFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKL 409

Query: 374 SP--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
           +   +N LL C C  G+   A  + ++M   ++  D   ++I I  LC+   +++AY+L 
Sbjct: 410 NVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLY 469

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M +    P      A +LG  K  N  +A   F   +   L+ D + Y+ +++G  ++
Sbjct: 470 EQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRL 529

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV------MRKVDKAIRLRSLAYSSGTS 544
           + I EA++++  M + G + S  +FN LI G C        RK+ + IRL+ L  S    
Sbjct: 530 DGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPS---- 585

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TYT +M    ++   +++   L +M           Y +LI+ +  QNK+ +    
Sbjct: 586 --VVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQL 643

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
              M   GL+PD  T                                   YN +I    K
Sbjct: 644 LEYMYAKGLLPDSVT-----------------------------------YNTIIQCFCK 668

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               ++A  L ++ML     P   T+ +L+ +
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINA 700



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 133/329 (40%), Gaps = 44/329 (13%)

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELL---GRMVVSSVVPDCATYSAFVLGKCK 454
           K++    ++C + +I I  LCE  ++  A   L    ++V  S+V      S F    CK
Sbjct: 229 KVSGAPQSECTT-SILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKF----CK 283

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           +   + A   F  +    L+ DS SY+ L+ GLC    + EA+     M K+G      +
Sbjct: 284 VGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVT 343

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N L  G  ++  +  A ++       G +    TYT ++ G  ++   ++ L +  + L
Sbjct: 344 YNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETL 403

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G  L+V  Y +L+  + +  ++++    F+ M    L P                   
Sbjct: 404 SRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP------------------- 444

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA-TTHGLL 693
                           D  +Y+ILI+GL KEG   +A  L + M  K   P       +L
Sbjct: 445 ----------------DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL 488

Query: 694 VGSSVGEEIDSRRFAFDSSSFPDSVSDIL 722
           +G      I   R  FD+ +  D + D++
Sbjct: 489 LGLFKNGNISEARNYFDTWTRMDLMEDVV 517


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 217/472 (45%), Gaps = 15/472 (3%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K S+ VF++++   +E    F + ++V +EM      P+      +L  L    R +S  
Sbjct: 129 KFSIGVFSLLIMEFLEMGL-FEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVW 184

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             ++ M  +G  P+   + ++ +             +L EM  LGI+  +  YT  I  L
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           CR+NK+EEA ++F++M+   ++P+  TY  +I+  C+   +  A  + ++++V  L P  
Sbjct: 245 CRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304

Query: 343 DVFVDIVRGLCEVGK-------FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            VF  +V G C+  +       F   V F  D   YV   +N L+   C +G    A  +
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV---YNCLIHGHCKSGNMLEAVGL 361

Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           L +M    ++ D  ++ I I  LC  +++ +A  L  +M    + P  ATY++ + G CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
             N E AL +  +++A  +  + I++S L++G C V  I  A+ ++  M+  G      +
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +  LI        + +A+RL S    +G      T+  ++ G  K  R    +    +  
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
            +    +   +  LI+ + +   +   + FF+ M   G+ PD  + +S+L G
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/501 (20%), Positives = 205/501 (40%), Gaps = 33/501 (6%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           ++   + L+    E    E AL   R M    C P+S+    ++ GL+   R D      
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDY 187

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
             M   G+  ++  Y  +     ++    +  +L   M +L + P+   Y   I  LC +
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
            ++++A  + E M   G+ P    +  ++ G C+ G   ++    +              
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK-------------- 293

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
                           E +    + +   +   +   C+  E+  A  L   MV   V P
Sbjct: 294 ----------------EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           +   Y+  + G CK  N  +A+ +  ++ + +L  D  +Y+ L+ GLC  +++ EA  +F
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M       SS+++N LI+G C    +++A+ L S   +SG      T++ ++ G   +
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           +  K  + +  +M ++G   DV  Y  LI +  ++  +K+    ++ M++AG+ P+  T 
Sbjct: 458 RDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             L+ G     +L +      +        +   +  LI GL + G   +AS     M  
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577

Query: 681 KGWVPDATTHGLLVGSSVGEE 701
            G  PD  ++  ++   + E+
Sbjct: 578 CGITPDICSYVSMLKGHLQEK 598



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/427 (21%), Positives = 186/427 (43%), Gaps = 33/427 (7%)

Query: 152 RVLVNMNSGGFKLSVDVFNV-VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           ++L  M S G K +V ++ + +L    + K   A+ +F  + M K G++PN+ T + +++
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF--ELMKKHGVLPNLYTYSAMID 277

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
              +T  +  A   ++ +      PN   F  ++ G      +  + S+   M   G+  
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
            L  Y C+I   C+   + EA+ L   M +L+L PD  TY  LIN LC   ++ +AN + 
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
           + M    + P+   +  ++ G C+    +++++   +       P               
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP--------------- 442

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                          +  +++  I   C   +I+ A  L   M +  +VPD  TY+A + 
Sbjct: 443 ---------------NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
              K  N ++ALR++  +    +  +  +++ LV+G  +  +++ A++ +   ++     
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +   F  LI GLC    + +A R  S   S G +    +Y  ++ G ++ +R  D +++ 
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQ 607

Query: 571 AQMLVEG 577
             M+  G
Sbjct: 608 CDMIKTG 614



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 9/255 (3%)

Query: 60  NLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           NLSPD      LI  L   + ++ A ++F+ +  ++ F  +A TY  +I       N+E+
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA-TYNSLIHGYCKEYNMEQ 427

Query: 115 MEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
              LC  M      PN+     +L+  + N   +  AM +   M   G    V  +  ++
Sbjct: 428 ALDLCSEMTASGVEPNII-TFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            A  +E     + + +Y +M++AGI PN  T   L++  ++  R+  A+D ++  +++  
Sbjct: 487 DAHFKEA-NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
           C N   F  +I+GL  N  +  +     +M   GI  ++  Y  ++    +E ++ + + 
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605

Query: 294 LFKMMRALDLMPDEL 308
           L   M    ++P+ L
Sbjct: 606 LQCDMIKTGILPNLL 620



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 75/358 (20%), Positives = 141/358 (39%), Gaps = 60/358 (16%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           +A++     A K+ LA+C+++ + +R     +  N+  R     E+I+     +G     
Sbjct: 79  SAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIG----- 133

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK---- 492
                   +S  ++   ++  +E+AL V R++       DS +   ++ GL +  +    
Sbjct: 134 -------VFSLLIMEFLEMGLFEEALWVSREMKCSP---DSKACLSILNGLVRRRRFDSV 183

Query: 493 -----------ITEAVEVF-----CC---------------MSKNGCSLSSSSFNILIYG 521
                      +   V ++     CC               M+  G   +   + I I  
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILD 243

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           LC   K+++A ++  L    G      TY+ ++ G  K    +    +  ++LV     +
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG-LADGSQLHLVSSGI 640
           V  +  L+    +  +L      F  MVK G+ P+      L+HG    G+ L  V    
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG--- 360

Query: 641 NKLVSDSEVLDSS----MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             L+S+ E L+ S     Y ILINGL  E   ++A+ L   M  +   P + T+  L+
Sbjct: 361 --LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416


>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/556 (20%), Positives = 250/556 (44%), Gaps = 24/556 (4%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           TT  +  I+SL        +  VL  + +   AL+ F+WV     F+H  DT+ K+I  L
Sbjct: 103 TTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEIL 162

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
           G A  +     +  +M K+      +  + L+ S+     V  +++V   M   G + ++
Sbjct: 163 GRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTI 222

Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
             ++ +   I+   R      + +  M+  G++P   T N ++   F + ++E+A   F 
Sbjct: 223 KSYDALFKVILRRGRYMMAKRY-FNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFE 281

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M ++   P+  T+  +I G     +++++     EM    I+  +  YT +I       
Sbjct: 282 EMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVG 341

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD-VF 345
           ++++ +RLF+ M++  + P+ +TY  L+  LC+  ++ +A +++++M+   + P D+ +F
Sbjct: 342 RVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIF 401

Query: 346 VDIVRGLCEVGKFDESVNFLE--------DKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           + ++   C+ G+ D + + L+         + G+    +  L+E  C +G +  A  +L+
Sbjct: 402 MRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGH----YGVLIENFCKSGVYDRAVKLLD 457

Query: 398 KMADRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           K+ +++I          +   +N+ I +LC + +  KA E L R ++   V D   ++  
Sbjct: 458 KLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKA-ETLFRQLMKKGVQDPIAFNNL 516

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  K    E A  + + +  + +  ++ +Y  L+E   +  +  +A      M +NG 
Sbjct: 517 IRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGH 576

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
              SS F  ++  L    ++  A R+ +     G         KI+  L+     ++ L 
Sbjct: 577 IPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALG 636

Query: 569 VLAQMLVEGCALDVEA 584
            +  ++  GC  D + 
Sbjct: 637 RIDLLMNNGCEPDFDG 652



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/534 (20%), Positives = 226/534 (42%), Gaps = 21/534 (3%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFR 226
           V+NV+ G+     R     +  ++ + +AG+   + DT   ++E+L   +++  A     
Sbjct: 122 VWNVLHGS-----RNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILL 176

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M KKG   +   F ++I        V +SV +  +M +LG++  +  Y  +  ++ R  
Sbjct: 177 DMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRG 236

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +   A R F  M    +MP   TY  +I     +L+++ AN   E+M    ++P    + 
Sbjct: 237 RYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYN 296

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            ++ G   + K +E+  F  +  G    P    +  +++   + G+      + E+M   
Sbjct: 297 TMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSF 356

Query: 403 KI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP-DCATYSAFVLGKCKLCNYED 460
            I  +  +++  +  LC+ E++ +A  ++  MV   + P D + +   +  +CK    + 
Sbjct: 357 GIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDA 416

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF--------CCMSKNGCSLSS 512
           A  V + +   S+  ++  Y  L+E  C+      AV++             +N   + S
Sbjct: 417 AADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMES 476

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           S +N++I  LC   +  KA  L       G     + +  ++ G  K    +    +L  
Sbjct: 477 SGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIA-FNNLIRGHSKEGAPESAFEILKI 535

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M       + +AY +LI+S  ++ +  D     + M++ G +PD     S++  L +  +
Sbjct: 536 MGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGR 595

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           +   S  +N +V      +  +   ++  L   G   +A   +DL++  G  PD
Sbjct: 596 IQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD 649



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 108/515 (20%), Positives = 215/515 (41%), Gaps = 42/515 (8%)

Query: 231 KGCCPNSRTFEIVIKGLIAN----SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +G   N    E +I  ++AN    +R+ +S+  L   FD         ++ +  +L    
Sbjct: 80  RGKLRNPEKIEDIICRMMANRAWTTRLQNSIRSLVPQFD---------HSLVWNVLHGSR 130

Query: 287 KLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             + A++ F+ + RA     D  T+ ++I  L    +L+ A  IL DM   G+   +D+F
Sbjct: 131 NSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLF 190

Query: 346 VDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
           V ++    + G   ESV   +             ++AL +     G++ +AK     M +
Sbjct: 191 VLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLN 250

Query: 402 RKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
             +   C ++NI I     + ++  A      M    + PD  TY+  + G  ++   E+
Sbjct: 251 EGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEE 310

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A + F ++  +++    ISY+ +++G   V ++ + + +F  M   G   ++ +++ L+ 
Sbjct: 311 AEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLP 370

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ-RAKDLLV---VLAQMLVE 576
           GLC     +K +  +++       Y       I + L+  Q +A  L     VL  M+  
Sbjct: 371 GLC---DGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRL 427

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL--------LHGLA 628
               +   Y +LI++  +           + +++  ++   +  L +        +  L 
Sbjct: 428 SIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLC 487

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP-DA 687
           +  Q     +   +L+    V D   +N LI G  KEG    A  +L +M G+  VP +A
Sbjct: 488 NSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGAPESAFEILKIM-GRREVPREA 545

Query: 688 TTHGLLVGS--SVGEEIDSRRF---AFDSSSFPDS 717
             + LL+ S    GE  D++       ++   PDS
Sbjct: 546 DAYRLLIESFLKKGEPADAKTALDGMIENGHIPDS 580


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 185/406 (45%), Gaps = 41/406 (10%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN+ T+  +I  L    +V D++S+L +M   G   ++  Y  ++   C+     +A+ L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
             +MRA    P+ +TY  L++ +C    +DDA ++L ++   G  P+   +  +++GLC 
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 355 V---GKFDESVN-FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDS 409
               G  DE V   L + C    +  N ++   C  G    A  +LEKM+     A+  +
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I  LCE   +  A  LL +M      PD  TY+  + G C    + DA  +   ++
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
               + D+++++ L+  LCQ   + +A+EVF  M   GC+ +S +++ +I GL    K+D
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304

Query: 530 KAIRL-----------------------------------RSLAYSSGTSYTTSTYTKIM 554
           +A+ L                                   R L   SG S  T  Y  I+
Sbjct: 305 QALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQ-DSGISPHTVLYNAIL 363

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           LGL +  + +  + ++A M+  GC  D   Y ILI+ ++ +  L +
Sbjct: 364 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNE 409



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 194/439 (44%), Gaps = 37/439 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
            L+ +     +V  A+ VL +M   G    V  +N++L A  +  RG+   + +   M  
Sbjct: 12  PLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK-GRGYRQAMELIDLMRA 70

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PN  T N L++ +     ++ AL+  R +   GC P++  +  V+KGL +  R  D
Sbjct: 71  EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD 130

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++ EM         + +  +I  LCR+  L++AI+L + M       + +TY  +IN
Sbjct: 131 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 190

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LCE   +D A  +L  M   G  P      DIV                          
Sbjct: 191 GLCEQRNVDGAMGLLSKMKSYGCKP------DIVT------------------------- 219

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N LL+  C+A ++  A+ +++ M     + D  ++N  I +LC+   +  A E+  +M 
Sbjct: 220 YNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 279

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+  TYS  + G  K    + AL +F ++  +    D I Y  L E L   + I 
Sbjct: 280 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIE 338

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA++    +  +G S  +  +N ++ GLC   K + AI + +   SSG      TY  ++
Sbjct: 339 EAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 398

Query: 555 LGLV---KLQRAKDLLVVL 570
            GL     L  A++LL+ L
Sbjct: 399 EGLAYEGYLNEARELLIKL 417



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 164/350 (46%), Gaps = 9/350 (2%)

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N L+   C  G+   A  +L+ M  R  A D  ++NI +   C+    R+A EL+  M 
Sbjct: 10  YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+  TY+  + G C   + +DAL + R + +      +++Y+ +++GLC  E+  
Sbjct: 70  AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A E+   M +  C  + ++FN++IY LC    + +AI+L       G +    TY  I+
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            GL + +     + +L++M   GC  D+  Y  L++ +    +  D     + M + G +
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCL 249

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGLWKEGLTSQASY 673
           PD  T  +L+ G      L + +  + K + D     +S+ Y+ +I+GL K     QA  
Sbjct: 250 PDNVTFNTLI-GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 308

Query: 674 LLDLMLGKGWVPDATTHGLLV-----GSSVGEEIDSRRFAFDSSSFPDSV 718
           L + M  KG+ PD   + LL        ++ E I + R   DS   P +V
Sbjct: 309 LFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 357



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 174/399 (43%), Gaps = 6/399 (1%)

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           + + P+  TY  LI+ LCE  ++ DA  +L+DM+  G  P    +  ++   C+   + +
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 361 SVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIR 415
           ++  ++    + C      +N L++  C  G    A  +L  +          ++N  ++
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC  E    A EL+  M+  +  P+ AT++  +   C+    + A+++  ++S      
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           + ++Y+ ++ GLC+   +  A+ +   M   GC     ++N L+ GLC   +   A  L 
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                +G      T+  ++  L +     D + V  QM  +GC  +   Y  +I  +++ 
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
            KL      FN M   G  PD+   L L   L D   +      + KL        + +Y
Sbjct: 301 TKLDQALELFNEMGHKGFNPDKIYQL-LAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           N ++ GL + G T  A  ++  M+  G +PD  T+ +L+
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 398



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 147/325 (45%), Gaps = 5/325 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LCE  ++R A  +L  M+     PD  TY+  +   CK   Y  A+ +   +
Sbjct: 9   TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            A+    ++++Y+ L++G+C    + +A+E+   +  +GC  S+ ++N ++ GLC   + 
Sbjct: 69  RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
             A  L +           +T+  ++  L +    +  + +L +M   GC  ++  Y  +
Sbjct: 129 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAI 188

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I  + EQ  +       + M   G  PD  T  +LL GL   ++       ++ +  +  
Sbjct: 189 INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGC 248

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRF 707
           + D+  +N LI  L ++GL   A  +   M  KG  P++ T+  ++ G +   ++D    
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 308

Query: 708 AFDSSSF----PDSVSDILAEGLGN 728
            F+        PD +  +LAE L +
Sbjct: 309 LFNEMGHKGFNPDKIYQLLAECLND 333



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 117/259 (45%)

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            V P+  TY+  +   C+     DAL V   +  +    D ++Y+ L+E  C+     +A
Sbjct: 2   PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQA 61

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           +E+   M   GC+ ++ ++N+L+ G+C    VD A+ L     S G   +T  Y  ++ G
Sbjct: 62  MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L   +R  D   ++ +ML E C  +   + ++I S+  +  L+        M K G   +
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T  ++++GL +   +      ++K+ S     D   YN L+ GL        A  L+D
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241

Query: 677 LMLGKGWVPDATTHGLLVG 695
            M   G +PD  T   L+G
Sbjct: 242 NMTQNGCLPDNVTFNTLIG 260


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 206/430 (47%), Gaps = 22/430 (5%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF  ++  FN +L  +  E R  ++ + ++ +M K    PNV T   L+  L    R+  
Sbjct: 45  GFHPTLVTFNTLLHGLCVEDR-VSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVE 99

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCII 279
           A+    RM + G  PN  T+  ++ G+        ++++L +M +L  I+ ++  Y+ II
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             L ++ +  +A  LF  M+   + PD +TY  +IN  C + +  +A  +L++M+V  ++
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA--- 392
           P    F  ++  L + G  + + + L++       P+    N LL+  C++GK   A   
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 393 -KCILEKMADRKIA--------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            K + + M D            D  ++NI I  L    +  +A EL   M    +VPD  
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTV 339

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TYS+ + G CK    ++A ++F  + ++S   + ++++ L+ G C+   + + +E+FC M
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G   ++ ++  LI G   +  ++ ++ +     SSG    T T   ++ GL   +  
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459

Query: 564 KDLLVVLAQM 573
           K  L +L ++
Sbjct: 460 KKALAMLEEL 469



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 218/489 (44%), Gaps = 53/489 (10%)

Query: 161 GFKLSVDV--FNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           G ++  D+  FN+++       K  FA  +  + ++ K G  P + T N LL  L   +R
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFA--LSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +  ALD F +M    C PN  TF  ++ GL    RV ++V++L  M + G+Q     Y  
Sbjct: 66  VSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121

Query: 278 IIPMLCRENKLEEAIRLFKMMRALD-LMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           I+  +C+      A+ L + M  L  + PD + Y  +I+ L ++ R  DA ++  +M   
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+ P      DIV   C +  F                         C++GK+  A+ +L
Sbjct: 182 GIFP------DIVTYSCMINGF-------------------------CSSGKWSEAQRLL 210

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M  RKI+ D  +++  I  L +  ++  A +LL  M+ S V P+  T +  + G C  
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 456 CNYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLCQVEKITEAVEVFCCMS 504
              +DAL +F+ +    + +D+            +Y+ L+ GL    K  EA E++  M 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G    + +++ +I GLC   ++D+A ++     S   S    T+  ++ G  K     
Sbjct: 331 HRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D L +  +M   G   +   Y  LI+   +   +      F  M+ +G+ PD  T+ ++L
Sbjct: 391 DGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNML 450

Query: 625 HGLADGSQL 633
            GL    +L
Sbjct: 451 TGLWSKEEL 459



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 212/459 (46%), Gaps = 22/459 (4%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           +F I+IK   + S++  ++S  G++  LG    L  +  ++  LC E+++ EA+ LF  M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 P+ +T+  L+N LC   R+ +A  +L+ M+  GL P    +  IV G+C++G  
Sbjct: 77  ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 359 DESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
             ++N L   ++  ++      ++A+++     G+   A+ +  +M D+ I  D  +++ 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I   C + +  +A  LL  M+V  + PD  T+S  +    K  +   A  + +++ +  
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK-----------NGCSLSSSSFNILIYG 521
           +  + ++ + L++GLC   K+ +A+E+F  M K           NG      ++NILI G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           L    K  +A  L       G    T TY+ ++ GL K  R  +   +   M  +  + +
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  +  LI    +   + D    F  M + G+V +  T ++L+ G      ++       
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 642 KLVSDSEVLDSSMYNILINGLW-KEGLTSQASYLLDLML 679
           +++S     D+     ++ GLW KE L    + L +L +
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQM 471



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 179/439 (40%), Gaps = 18/439 (4%)

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
             L +  D  ++  LI C C   +L  A      +  +G  PT   F  ++ GLC   + 
Sbjct: 7   HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWL 417
            E+++     C         L+   C  G+   A  +L++M +  +     ++   +  +
Sbjct: 67  SEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 418 CENEEIRKAYELLGRMV-VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           C+  +   A  LL +M  +S + PD   YSA + G  K   + DA  +F ++  + +  D
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++YS ++ G C   K +EA  +   M     S    +F+ LI  L     ++ A  L  
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM-----------LVEGCALDVEAY 585
              SSG      T   ++ GL    + KD L +   M              G   DV+ Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            ILI  +  + K  +    +  M   G+VPD  T  S+++GL   S+L   +   + + S
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGE 700
            S   +   +N LI G  K G+      L   M  +G V +A T+     G     ++  
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 701 EIDSRRFAFDSSSFPDSVS 719
            +D  +    S  +PD+++
Sbjct: 427 SLDIFQEMISSGVYPDTIT 445


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 150/696 (21%), Positives = 285/696 (40%), Gaps = 113/696 (16%)

Query: 58  RHNLSPDHL---IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
           R  +SP  L   IR L +T  +  A  +F  V + +     + ++  ++  +  +G+++ 
Sbjct: 158 RCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDL 217

Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           +E   + M    +   +  L S++ ++ N  + + A+ V   +   G+   VD   + + 
Sbjct: 218 VEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGW---VDGHVLSIL 274

Query: 175 AIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
            +   K G  D  F + + M   GI  N  T   L+      +R++ AL  F++M K G 
Sbjct: 275 VLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGF 334

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE-------- 285
            P+   ++ +I GL A   ++ ++ +L EM +LGI  ++   + +I     E        
Sbjct: 335 APDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIE 394

Query: 286 NKLE----EAIRL------------------FKMMRALD-------------------LM 304
            +LE    EA+ L                  + ++RA+                    + 
Sbjct: 395 ERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVR 454

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD  ++  +I+ LC   +LD A  +  DM+ +G      ++ +++  L    + +E    
Sbjct: 455 PDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLL 514

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSW----NIPIRW 416
           L++  G    P    HN++  C C       A   L+ + + ++   + W     + ++ 
Sbjct: 515 LKEMKGSGFRPTQFTHNSIFGCLCRREDVTGA---LDMVREMRVHGHEPWIKHYTLLVKQ 571

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+ +   +A   L  MV    +PD   YSA + G  K+   + AL +FR + A+    D
Sbjct: 572 LCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPD 631

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++Y+ L+ G C+V++++EA ++   M   G   S  ++N+LI G C    +D+A    S
Sbjct: 632 VVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLS 691

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                       TYT ++ GL    R  D + +  +M  +GC+                 
Sbjct: 692 RMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCS----------------- 734

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGL-----ADGSQLHLVSSGINKLVSDSEVLD 651
                             P+R + ++L+HGL      D + L+    G      + E  D
Sbjct: 735 ------------------PNRISFIALIHGLCKCGWPDAALLYFREMG------ERETPD 770

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           + +Y  LI         + A  +L  M+ KG  PD 
Sbjct: 771 TIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDP 806



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 150/633 (23%), Positives = 254/633 (40%), Gaps = 31/633 (4%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYP 128
           VL        A + F W S Q  F H   TY  M   L  A     +  L  ++V  R  
Sbjct: 101 VLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCA 160

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD---VFNVVLGAIVEEKRGFAD 185
               AL   +    +   V  A  +   +     +L V     FN +L AI   K G  D
Sbjct: 161 MSPGALGFFIRCLGSTGLVEEANLLFDQVKM--MRLCVPNSYSFNCLLEAI--SKSGSID 216

Query: 186 FV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
            V    KEM  +G  P+  TL  +L+    + + + AL  F  ++ +G   +     I++
Sbjct: 217 LVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILV 275

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                   VD +  ++  M DLGI+L    +  +I    R++++++A++LFK M+     
Sbjct: 276 LTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFA 335

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC--EVGKFDESV 362
           PD   Y+ LI  LC    ++ A  +L +M  +G+ P   +   ++   C  EV  +    
Sbjct: 336 PDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-AYCSEEVDIYRLIE 394

Query: 363 NFLED-KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
             LED     +   +N++L    N      A  +L  M      D             N 
Sbjct: 395 ERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTD-------------NF 441

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           E+ K +     MV   V PD  ++S  + G C     + AL +FR +       + + Y+
Sbjct: 442 EVNKFF-----MVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYN 496

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L++ L    ++ E   +   M  +G   +  + N +   LC    V  A+ +       
Sbjct: 497 NLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVH 556

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       YT ++  L K +R+ +    LA+M+ EG   D+ AY   I    +   +   
Sbjct: 557 GHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQA 616

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F  +   G  PD     +L++G     ++      ++++V+   V     YN+LI+G
Sbjct: 617 LEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDG 676

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             K G   QA + L  M+GK   P+  T+  L+
Sbjct: 677 WCKNGDIDQAFHCLSRMVGKEREPNVITYTTLI 709



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 169/404 (41%), Gaps = 58/404 (14%)

Query: 313 LINCLCENLRLDDANDILEDMIVIGL-TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            I CL     +++AN + + + ++ L  P    F  ++  + + G  D     L++ C  
Sbjct: 169 FIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDS 228

Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
              P      ++L+  CN+ KF  A  +  ++  R   D    +I +    +  E+ KA+
Sbjct: 229 GWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAF 288

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           EL+ RM                         ED            + L+  ++  L+ G 
Sbjct: 289 ELIERM-------------------------EDL----------GIRLNEKTFCVLIHGF 313

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            +  ++ +A+++F  M K+G +   S ++ LI GLC  ++++KA+ L S     G     
Sbjct: 314 VRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDI 373

Query: 548 STYTKIM------LGLVKL--QRAKDL----LVVLAQM----LVEGCALDVEAYCILIQS 591
              +K++      + + +L  +R +DL    +++L       LV G ++D   Y  L+++
Sbjct: 374 QILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYY--LLRA 431

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           M+  N   +  +    MVK  + PD  +   ++ GL +  +L L  S    +V      +
Sbjct: 432 MTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQN 491

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
             +YN LI+ L       +   LL  M G G+ P   TH  + G
Sbjct: 492 VLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFG 535


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 246/561 (43%), Gaps = 60/561 (10%)

Query: 16  KWVNLTSCISSLSCANTIPLSS--ETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNT 73
           K  N  +  SS +   T P S   +T  I       + +K++++    +P  L++ L N+
Sbjct: 24  KLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNS 83

Query: 74  NDLSS-ALKIFKWVSIQKRFQ--HTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNV 130
                  L  FKW   QK F   H  + +C+++  L  A N  ++  L  +  K  + + 
Sbjct: 84  EAQPDLILCYFKWT--QKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSN 141

Query: 131 REALISL-----------------VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
                SL                 V+++V +  ++ A+         GF+LS    N +L
Sbjct: 142 STIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 174 GAIVEEKR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
            ++V+E R G  + V  YKEM++  I  NV T + ++  L +  + + A D    M   G
Sbjct: 202 VSLVKEGRIGVVESV--YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P+  T+  +I G     ++  + ++L EM    I      +  +I   CR+  +  A 
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
           ++F+ M+   L P+ +TY  LIN LC N +LD+A  + + M  +GL P    +  ++ G 
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 353 CEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
           C+     E+   L+D                   GK  LA  ++            ++N 
Sbjct: 380 CKKKMLKEAREMLDD------------------IGKRGLAPNVI------------TFNT 409

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I    +   +  A+ L   M+ + V P+ +TY+  ++G C+  N ++A ++ +++    
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVF---CCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           L  D ++Y+ LV+ LC+  +  +AV +      M K G   +  ++N+LI G C   K++
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLE 529

Query: 530 KAIRLRSLAYSSGTSYTTSTY 550
           +A RL +     G     +TY
Sbjct: 530 EANRLLNEMLEKGLIPNRTTY 550



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/524 (23%), Positives = 231/524 (44%), Gaps = 80/524 (15%)

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFET---NRIESALDQFRRMHKKGCCPNSRTFEI 242
           F +  KE    G + NV+    LL +L      N+I + LD F +               
Sbjct: 94  FKWTQKEF---GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAK--------------- 135

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC----IIPMLC----RENKLEEAIRL 294
                 +NS +  S+S+LG             + C    I+ ML     +  +++ A+  
Sbjct: 136 --NAHYSNSTIFHSLSVLGS------------WGCANSIIVDMLVWAYVKNGEMDLALEG 181

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
           F            L+   ++  L +  R+     + ++MI   +      F  ++ GLC+
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 355 VGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-S 409
           VGKF ++ + +ED   +  SP    +N +++  C AGK F A  +L++M  ++I   + +
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +NI I   C +E +  A ++   M    + P+  TY++ + G C     ++AL +  ++S
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
              L  + ++Y+ L+ G C+ + + EA E+   + K G + +  +FN LI       ++D
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  LRS+   +G     STY  +++G  +    K+   +  +M   G   D+  Y IL+
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            ++ ++ + +          KA  + D  T++        G + ++V+            
Sbjct: 482 DALCKKGETR----------KAVRLLDEMTLME-----KKGRRANIVT------------ 514

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                YN+LI G   +G   +A+ LL+ ML KG +P+ TT+ +L
Sbjct: 515 -----YNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 4/322 (1%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N +L      G+  + + + ++M  R+I  +  ++++ I  LC+  + +KA +++  M  
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               P   TY+  + G CK      A  + +++ A+ +  + I+++ L++G C+ E +T 
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A +VF  M + G   +  ++N LI GLC   K+D+A+ L+      G      TY  ++ 
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K +  K+   +L  +   G A +V  +  LI +  +  ++ D  L  ++M+  G+ P
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T   L+ G      +        ++  +    D   YNIL++ L K+G T +A  LL
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 676 D---LMLGKGWVPDATTHGLLV 694
           D   LM  KG   +  T+ +L+
Sbjct: 498 DEMTLMEKKGRRANIVTYNVLI 519



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 9/250 (3%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREA 133
           ++++A K+F+ +  Q   Q    TY  +I  L   G ++E  GL   M      PNV   
Sbjct: 314 NVTAAKKVFEEMQRQG-LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV-VT 371

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
             +L+  F     +  A  +L ++   G   +V  FN ++ A    K G  D  F+ + M
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY--GKAGRMDDAFLLRSM 429

Query: 194 -VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
            +  G+ PNV T N L+        ++ A    + M   G   +  T+ I++  L     
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 253 VDDSVSILGEMFDL---GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              +V +L EM  +   G +  +  Y  +I   C + KLEEA RL   M    L+P+  T
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549

Query: 310 YEELINCLCE 319
           Y+ L + + E
Sbjct: 550 YDILRDEMME 559


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 185/406 (45%), Gaps = 41/406 (10%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           PN+ T+  +I  L    +V D++S+L +M   G   ++  Y  ++   C+     +A+ L
Sbjct: 165 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 224

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
             +MRA    P+ +TY  L++ +C    +DDA ++L ++   G  P+   +  +++GLC 
Sbjct: 225 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 284

Query: 355 V---GKFDESVN-FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDS 409
               G  DE V   L + C    +  N ++   C  G    A  +LEKM+     A+  +
Sbjct: 285 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 344

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  I  LCE   +  A  LL +M      PD  TY+  + G C    + DA  +   ++
Sbjct: 345 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT 404

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
               + D+++++ L+  LCQ   + +A+EVF  M   GC+ +S +++ +I GL    K+D
Sbjct: 405 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 464

Query: 530 KAIRL-----------------------------------RSLAYSSGTSYTTSTYTKIM 554
           +A+ L                                   R L   SG S  T  Y  I+
Sbjct: 465 QALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQ-DSGISPHTVLYNAIL 523

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           LGL +  + +  + ++A M+  GC  D   Y ILI+ ++ +  L +
Sbjct: 524 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNE 569



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 194/439 (44%), Gaps = 37/439 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
            L+ +     +V  A+ VL +M   G    V  +N++L A  +  RG+   + +   M  
Sbjct: 172 PLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK-GRGYRQAMELIDLMRA 230

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PN  T N L++ +     ++ AL+  R +   GC P++  +  V+KGL +  R  D
Sbjct: 231 EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD 290

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  ++ EM         + +  +I  LCR+  L++AI+L + M       + +TY  +IN
Sbjct: 291 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 350

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LCE   +D A  +L  M   G  P      DIV                          
Sbjct: 351 GLCEQRNVDGAMGLLSKMKSYGCKP------DIVT------------------------- 379

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +N LL+  C+A ++  A+ +++ M     + D  ++N  I +LC+   +  A E+  +M 
Sbjct: 380 YNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 439

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+  TYS  + G  K    + AL +F ++  +    D I Y  L E L   + I 
Sbjct: 440 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIE 498

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EA++    +  +G S  +  +N ++ GLC   K + AI + +   SSG      TY  ++
Sbjct: 499 EAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 558

Query: 555 LGLV---KLQRAKDLLVVL 570
            GL     L  A++LL+ L
Sbjct: 559 EGLAYEGYLNEARELLIKL 577



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 200/465 (43%), Gaps = 12/465 (2%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P++     +++ L    R DD+  ++G     G    +  Y  +    CR  +L +A R+
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGA---CGPAATVVAYGALTDGYCRAGRLGDARRV 157

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
              M    + P+  TY  LI+ LCE  ++ DA  +L+DM+  G  P    +  ++   C+
Sbjct: 158 VGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214

Query: 355 VGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-S 409
              + +++  ++    + C      +N L++  C  G    A  +L  +          +
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +N  ++ LC  E    A EL+  M+  +  P+ AT++  +   C+    + A+++  ++S
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 + ++Y+ ++ GLC+   +  A+ +   M   GC     ++N L+ GLC   +  
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  L      +G      T+  ++  L +     D + V  QM  +GC  +   Y  +I
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
             +++  KL      FN M   G  PD+   L L   L D   +      + KL      
Sbjct: 455 SGLAKATKLDQALELFNEMGHKGFNPDKIYQL-LAECLNDDDTIEEAIQTVRKLQDSGIS 513

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             + +YN ++ GL + G T  A  ++  M+  G +PD  T+ +L+
Sbjct: 514 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 558



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 179/397 (45%), Gaps = 11/397 (2%)

Query: 340 PTDDVFVD-IVRGLCEVGKFDESVNFLEDKCGYVTS--PHNALLECCCNAGKFFLAKCIL 396
           P D    + +VR LC  G+ D++   +   CG   +   + AL +  C AG+   A+ ++
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDAERVV-GACGPAATVVAYGALTDGYCRAGRLGDARRVV 158

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
             M  +  A   ++N  I  LCE  ++R A  +L  M+     PD  TY+  +   CK  
Sbjct: 159 GGMPVQPNAY--TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGR 216

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
            Y  A+ +   + A+    ++++Y+ L++G+C    + +A+E+   +  +GC  S+ ++N
Sbjct: 217 GYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 276

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            ++ GLC   +   A  L +           +T+  ++  L +    +  + +L +M   
Sbjct: 277 TVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 336

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           GC  ++  Y  +I  + EQ  +       + M   G  PD  T  +LL GL   +Q    
Sbjct: 337 GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDA 396

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-G 695
              ++ +  +  + D+  +N LI  L ++GL   A  +   M  KG  P++ T+  ++ G
Sbjct: 397 EELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISG 456

Query: 696 SSVGEEIDSRRFAFDSSSF----PDSVSDILAEGLGN 728
            +   ++D     F+        PD +  +LAE L +
Sbjct: 457 LAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLND 493


>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Glycine max]
          Length = 738

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 138/665 (20%), Positives = 286/665 (43%), Gaps = 35/665 (5%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           TT  +  I+SL     P  +  VL        AL+ ++WV     F HT +T  K++  L
Sbjct: 70  TTRLQNSIRSLVPEFDPSLVYNVLHGAASPEHALQFYRWVERAGLFTHTPETTLKIVQIL 129

Query: 107 GLAGNVEEMEGLCQNMVK---ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFK 163
           G    +     +  +  +    R     +A +SL+ S+     V  ++++   M   G  
Sbjct: 130 GRYSKLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAGIVQESVKLFKKMKELGVD 189

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
            +V  ++ +   I+   R      + Y  M+   + P   T N LL  +F + R+++A+ 
Sbjct: 190 RTVKSYDALFKVILRRGRYMMAKRY-YNAMLNESVEPTRHTYNILLWGMFLSLRLDTAVR 248

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            +  M  +G  P+  T+  +I G     +V+++  +  EM    I   +  +T ++    
Sbjct: 249 FYEDMKSRGILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYV 308

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
              ++++A+++F+ M+   + P+ +T+  L+  LC+  ++ +A D+L +M+   + P D+
Sbjct: 309 AAGQIDDALKVFEEMKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDN 368

Query: 344 -VFVDIVRGLCEVGKFDESVNFLE--------DKCGYVTSPHNALLECCCNAGKFFLAKC 394
            VF+ ++   C+ G  D + + L+         + G+    +  L+E  C A  +  A+ 
Sbjct: 369 AVFMKLMSCQCKAGDLDAAGDVLKAMIRLSIPTEAGH----YGVLIENFCKANLYDKAEK 424

Query: 395 ILEKMADRKIA--------------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
           +L+KM +++I               +  ++N+ I +LCE+    KA E   R ++   V 
Sbjct: 425 LLDKMIEKEIVLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKA-ETFFRQLMKKGVQ 483

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  +++  + G  K  N + A  + + +  + +  D+ SY  L+E   +  +  +A    
Sbjct: 484 DSVSFNNLICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTAL 543

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M ++G    SS +  ++  L    +V  A R+       G        +K++  L+  
Sbjct: 544 DGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMR 603

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
              ++ L  +  +++ GC  D +    L+  + E+ K        + +++   + D    
Sbjct: 604 GHVEEALGRIHLLMLNGCEPDFDH---LLSVLCEKEKTIAALKLLDFVLERDCIIDFSIY 660

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
             +L  L    +     S + K++      D S  + LI  L +EG T QA  L  ++ G
Sbjct: 661 DKVLDALLAAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMIKG 720

Query: 681 KGWVP 685
               P
Sbjct: 721 TDGGP 725


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/486 (22%), Positives = 230/486 (47%), Gaps = 10/486 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +++EM K G++PN+ T N  L  L +  R + A + F  M  KG  P+  ++  ++ G  
Sbjct: 357 MFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYA 416

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           +     D + +   M   GI      +T +I    +   +++A+ +F  M+   + PD +
Sbjct: 417 SEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV 476

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG---KFDESVNFL 365
           TY  +I+      RL DA +    M+  G+ P   V+  I++G C  G   K  E V+ +
Sbjct: 477 TYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM 536

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCEN 420
            +K   +  P     ++++   C  G+   A  I +   D  +     ++N  I   C  
Sbjct: 537 INKG--IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLV 594

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            ++ KA+++L  M V  V PD  TY+  + G  K     D L +FR++  + +  ++++Y
Sbjct: 595 GKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTY 654

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
             ++ GL +  +   A + F  M ++G +++ S + I++ GLC     D+AI L     +
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
               ++ +    ++  + K+QR ++   + A +   G   +   Y ++I ++ +   ++D
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVED 774

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M K+G+VP    +  ++  L +  ++    + ++K+     +L++S  +++++
Sbjct: 775 ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLS 834

Query: 661 GLWKEG 666
              ++G
Sbjct: 835 LFSRKG 840



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 209/524 (39%), Gaps = 8/524 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G K+     N +L  +    R       +   M + G VPN  + + +L+ L + +  + 
Sbjct: 187 GLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQR 246

Query: 221 ALDQFRRMHKKG--CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           ALD  + M K+G  C P+   +  VI G         + S+  EM   G++ ++  Y  I
Sbjct: 247 ALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+   +++A  + + M      PD +TY  +I+      RL +A  +  +M   GL
Sbjct: 307 IDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGL 366

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
            P        +  LC+ G+  E+  F +        P    +  LL    + G F     
Sbjct: 367 IPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIG 426

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +   M    I A+C  + I I    +   +  A  +   M    V PD  TYS  +    
Sbjct: 427 LFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFS 486

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS- 512
           ++    DA+  F Q+ A+ +  ++  YS +++G C    + +A E+   M   G      
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             F+ +I  LC   +V  A  +  LA   G      T+  ++ G   + +      +L  
Sbjct: 547 VFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDA 606

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M V G   D+  Y  L+    +  ++ D    F  M + G+ P+  T   +L GL    +
Sbjct: 607 MEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                   ++++     +  S+Y I++ GL +     +A  L  
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQ 710



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/501 (20%), Positives = 210/501 (41%), Gaps = 6/501 (1%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V   + ++   F       A   F  M ++G  P+  T+ ++I  L     +D +  +
Sbjct: 263 PDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L +M   G Q +   Y+C+I       +L+EA ++F+ M+   L+P+ +T    +  LC+
Sbjct: 323 LRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCK 382

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPH- 376
           + R  +A +  + M   G  P    +  ++ G    G F + +         G   + H 
Sbjct: 383 HGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHV 442

Query: 377 -NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
              L+      G    A  I  +M  + ++ D  +++  I        +  A E   +MV
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL-DSISYSKLVEGLCQVEKI 493
              + P+ A YS+ + G C       A  +  ++  + +   D + +S ++  LC+  ++
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            +A ++F   +  G      +FN LI G C++ K+DKA ++       G      TY  +
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTL 622

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G  K  R  D L +  +M  +G   +   Y I++  +    +       F+ M+++G 
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT 682

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
                    +L GL   +          KL + +     ++ N +IN ++K     +A  
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKE 742

Query: 674 LLDLMLGKGWVPDATTHGLLV 694
           L   +   G +P+ +T+G+++
Sbjct: 743 LFATISASGLLPNESTYGVMI 763



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/484 (21%), Positives = 197/484 (40%), Gaps = 39/484 (8%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR- 293
           P   T+ I++       R D  +++ G +   G++++      ++  LC  N+ EEA+  
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV--FVDIVRG 351
           L   M  L  +P+ ++Y  ++  LC+N     A D+L+ M   G   + DV  +  ++ G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 352 LCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA-DRKIAD 406
               G+  ++ +   +       P    +N +++  C A     A+ +L +M  D    D
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             +++  I        +++A ++   M    ++P+  T ++F+   CK    ++A   F 
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            ++A+    D  SY  L+ G        + + +F  M  NG + +   F ILI+      
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
            VD A+ + +     G S    TY+ ++    ++ R  D +    QM+  G   +   Y 
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYS 514

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            +IQ                  +  GLV  +E +  +++       +   SS IN L  D
Sbjct: 515 SIIQGFC---------------MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559

Query: 647 SEVLDSS----------------MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             V+D+                  +N LI+G    G   +A  +LD M   G  PD  T+
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619

Query: 691 GLLV 694
             L+
Sbjct: 620 NTLL 623



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 18/332 (5%)

Query: 376 HNALLECCCNAGK----FFLAKCILE---KMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
           +N L++CCC A +      L  CIL    KM      D  + N  ++ LC      +A  
Sbjct: 160 YNILMDCCCRARRPDLGLALFGCILRTGLKM------DQITANTLLKCLCYANRTEEAVN 213

Query: 429 -LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ--SLVLDSISYSKLVE 485
            LL RM     VP+  +YS  +   C     + AL + + ++ Q  +   D ++YS ++ 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYSSGTS 544
           G     +  +A  +F  M++ G      ++N++I  LC  R +DKA + LR +  + G  
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT-TDGAQ 332

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
             T TY+ ++ G   L R K+   +  +M   G   ++      + S+ +  + K+ A F
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F+ M   G  PD  +  +LLHG A       +    N + S+    +  ++ ILI+   K
Sbjct: 393 FDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK 452

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            G+   A  +   M  +G  PD  T+  ++ +
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/383 (20%), Positives = 166/383 (43%), Gaps = 44/383 (11%)

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           +M S G   +  VF +++ A    KRG  D  + ++ EM + G+ P+V T + ++     
Sbjct: 430 SMKSNGIAANCHVFTILIHAYA--KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSR 487

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI-QLELS 273
             R+  A+++F +M  +G  PN+  +  +I+G   +  +  +  ++ EM + GI + ++ 
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           F++ +I  LC++ ++ +A  +F +   +   P  +T+  LI+  C   ++D A  IL+ M
Sbjct: 548 FFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM 607

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
            V+G+ P    +  ++ G  + G+ ++ +    +       P    +  +L     AG+ 
Sbjct: 608 EVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667

Query: 390 FLAKCILEKMADRKIADCDS-WNIPIRWLCEN---------------------------- 420
             A+    +M +       S + I +  LC N                            
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727

Query: 421 -------EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
                  +   +A EL   +  S ++P+ +TY   ++   K    EDA  +F  +    +
Sbjct: 728 INAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGI 787

Query: 474 VLDSISYSKLVEGLCQVEKITEA 496
           V  S   ++++  L +  +I +A
Sbjct: 788 VPGSRLLNRIIRMLLEKGEIAKA 810



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +++ A ++L  M   G +  +  +N +L    +  R   D + +++EM + G+ PN  T 
Sbjct: 596 KMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGR-INDGLTLFREMQRKGVKPNTVTY 654

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +L  LF   R  +A  +F  M + G       + I++ GL  N+  D+++ +  ++  
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           + ++  ++    +I  + +  + EEA  LF  + A  L+P+E TY  +I  L ++  ++D
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVED 774

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           AN++   M   G+ P   +   I+R L E G+  ++ N+L
Sbjct: 775 ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 3/252 (1%)

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
            VP   TY+  +   C+    +  L +F  +    L +D I+ + L++ LC   +  EAV
Sbjct: 153 AVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAV 212

Query: 498 EVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS--TYTKIM 554
            V    MS+ GC  ++ S++I++  LC      +A+ L  +    G + +     Y+ ++
Sbjct: 213 NVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVI 272

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G            +  +M  +G   DV  Y ++I ++ +   +    L    M   G  
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  T   ++HG A   +L   +    ++     + +    N  +  L K G + +A+  
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392

Query: 675 LDLMLGKGWVPD 686
            D M  KG  PD
Sbjct: 393 FDSMTAKGHKPD 404



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 11/269 (4%)

Query: 463 RVFRQVSAQSLVLDSI-SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           RV R+ +   + + +  +Y+ L++  C+  +    + +F C+ + G  +   + N L+  
Sbjct: 142 RVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKC 201

Query: 522 LCVMRKVDKAIRLRSLAYSS-GTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEG 577
           LC   + ++A+ +     S  G      +Y+ ++  L      QRA DLL ++A+     
Sbjct: 202 LCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQ-GGA 260

Query: 578 CALDVEAYCILIQS-MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           C+ DV AY  +I    +E    K C+LF   M + G+ PD  T   ++  L     +   
Sbjct: 261 CSPDVVAYSTVIHGFFNEGETGKACSLFHE-MTRQGVKPDVVTYNLIIDALCKARAMDKA 319

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              + ++ +D    D+  Y+ +I+G    G   +A+ +   M  +G +P+  T    + S
Sbjct: 320 ELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLAS 379

Query: 697 --SVGEEIDSRRFAFDSSSFPDSVSDILA 723
               G   ++  F FDS +      DI +
Sbjct: 380 LCKHGRSKEAAEF-FDSMTAKGHKPDIFS 407



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 1/133 (0%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K S+ + N ++ A+ + +R   +   ++  +  +G++PN  T   ++  L +   +E A 
Sbjct: 718 KFSITILNTMINAMYKVQRK-EEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDAN 776

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           + F  M K G  P SR    +I+ L+    +  + + L ++    I LE S  + ++ + 
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLF 836

Query: 283 CRENKLEEAIRLF 295
            R+ K +E I+L 
Sbjct: 837 SRKGKYQEDIKLL 849


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 152/653 (23%), Positives = 282/653 (43%), Gaps = 37/653 (5%)

Query: 50  YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           ++ KI  L H+   D +I  L N  D  SA+  +  +S +  FQH+  +   +   L   
Sbjct: 82  FKEKIFMLNHS-QVDQIIEHL-NVEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARK 139

Query: 110 GNVEEMEGLCQNMVKER----YPNVREALIS--------------LVFSFVNHYRVNGAM 151
             + E+  +   M+        P++ E L+               L  ++     V+ A+
Sbjct: 140 KRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDAL 199

Query: 152 RVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            VLV M    F +S+  +N +L  +      +     VY E+  +G   +  T + +++ 
Sbjct: 200 FVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWD----VYNEIKVSGTPQSEYTSSIVVDG 255

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L   +R + A+  F+    K   P+  +F  ++        VD + S    M   G+  +
Sbjct: 256 LCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPD 315

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL----DDAN 327
              Y  +I  LC    + EA+ L   M    L PD +TY    N L +  RL    + A 
Sbjct: 316 AYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTY----NILAKGFRLLGLINGAW 371

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS--PHNALLECC 383
           +I++ M++ G  P    +  ++ G C++G  +E++   ++    G+  S      LL   
Sbjct: 372 NIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSL 431

Query: 384 CNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C + +  +A K   E  A+    D  +++  I  LC+  E+++A  L  +M  + ++P+ 
Sbjct: 432 CKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNS 491

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             + A ++G C+      A   F  +   +L LD I Y+ +++G  +     EAV+++  
Sbjct: 492 LIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQ 551

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           + + G S +  +FN L+YG C+ RK+ +A RL       G      TYT +M    +   
Sbjct: 552 LGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGN 611

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
            + LL +L++M  +        Y ++I+ + +Q KL++       M   GL PD+ +  +
Sbjct: 612 MQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNT 671

Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           ++        +       +K++  +    S  YNILING    G    A  LL
Sbjct: 672 IIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLL 724



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/505 (22%), Positives = 228/505 (45%), Gaps = 19/505 (3%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M   G+ P++ T N L +       I  A +  ++M  KG  PN  T+ ++I G     
Sbjct: 341 DMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIG 400

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V++++ +  EM   G QL +   T ++  LC+  +++ A +LF  M A  L PD +TY 
Sbjct: 401 NVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYS 460

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+ LC+   +  A  + E M    + P   +   I+ GLCE GK  ++  + +    Y
Sbjct: 461 TLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFD----Y 516

Query: 372 VTSP--------HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEE 422
           + +         +N +++     G    A  + +++ ++ I+    ++N  +   C N +
Sbjct: 517 LITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK 576

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A  LL  + +  + P+  TY+  +   C+  N +  L +  ++ A+++    I+Y+ 
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +++GLC+  K+ E+ ++   M   G +    S+N +I   C  R + KA +L        
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 543 TSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
              T+ TY  ++ G      L+ A +LLV L    V    L+  AY  +I++   +  + 
Sbjct: 697 LEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN---LNKYAYTTIIKAHCAKGDVD 753

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
              ++F  MV+ G         +++  L     +         ++SD    D  ++ +L+
Sbjct: 754 KAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLL 813

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWV 684
           N   + G  +    LL  M+  GW+
Sbjct: 814 NAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/475 (22%), Positives = 197/475 (41%), Gaps = 20/475 (4%)

Query: 59  HNLSPDHLIRVLDNTNDLSSALKIF-----KWVSIQKRFQHTAD----TYCKMILKLGLA 109
           H L PD     +   N L+   ++       W  IQK      +    TY  +I      
Sbjct: 345 HGLEPD-----MVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQI 399

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           GNVEE   L + M+   +     +   L+ S     +V+ A ++   M + G +  +  +
Sbjct: 400 GNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITY 459

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           + ++  + ++       + +Y++M    I+PN      +L  L E  +I  A   F  + 
Sbjct: 460 STLIHGLCKQGE-VQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
                 +   + I+I G I      ++V +  ++ + GI   +  +  ++   C   KL 
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A RL   ++   L P+ +TY  L+N  CE   +    ++L +M    + PT   +  ++
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA 405
           +GLC+  K  ES   LED      +P    +N +++  C A     A  + +KM    + 
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698

Query: 406 DCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
               ++NI I   C   +++ A  LL  +    V  +   Y+  +   C   + + A+  
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVY 758

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           FRQ+  +   +    YS ++  LC+   +TEA   FC M  +G       F +L+
Sbjct: 759 FRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLL 813



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/468 (19%), Positives = 198/468 (42%), Gaps = 35/468 (7%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTL 205
           V  A+++   M S GF+LS+    V+LG++ + ++   D  F ++ EM   G+ P++ T 
Sbjct: 402 VEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ--VDVAFKLFCEMEANGLRPDLITY 459

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + L+  L +   ++ A+  + +M      PNS     ++ GL    ++  +      +  
Sbjct: 460 STLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLIT 519

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             + L++  Y  +I    +     EA++L+K +    + P  +T+  L+   C N +L  
Sbjct: 520 SNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQ 579

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A  +L+ + + GL P    +  ++   CE G                     +LLE    
Sbjct: 580 ARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNM------------------QSLLE---- 617

Query: 386 AGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                    +L +M  + I     ++ + I+ LC+  +++++ +LL  M    + PD  +
Sbjct: 618 ---------LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVS 668

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  +   CK  +   A +++ ++   +L   S++Y+ L+ G C    + +A  +   + 
Sbjct: 669 YNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQ 728

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
               +L+  ++  +I   C    VDKA+         G   +   Y+ ++  L K     
Sbjct: 729 NRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVT 788

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           +       ML +G   D + + +L+ +  +   L         M+K+G
Sbjct: 789 EAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 181/435 (41%), Gaps = 46/435 (10%)

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN-DILEDMIVIGLTPTD 342
           R   + +A+ +   M+ L+ +    TY    N L  NLR  +   D+  ++ V G   ++
Sbjct: 191 RSAMVHDALFVLVKMKDLNFIVSIQTY----NSLLYNLRHSNIMWDVYNEIKVSGTPQSE 246

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
                +V GLC   +F ++V F +D  G    P     N ++   C  G   +AK     
Sbjct: 247 YTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCM 306

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           M    +  D  S+NI I  LC    + +A +L   M    + PD  TY+    G   L  
Sbjct: 307 MLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGL 366

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
              A  + +++  +    + ++Y+ L+ G CQ+  + EA++++  M  +G  LS  S  +
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L+  LC  R+VD A +L                                     +M   G
Sbjct: 427 LLGSLCKSRQVDVAFKL-----------------------------------FCEMEANG 451

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              D+  Y  LI  + +Q +++   L +  M    ++P+     ++L GL +  ++    
Sbjct: 452 LRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQAR 511

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-HGLLVGS 696
              + L++ +  LD  +YNI+I+G  K G T +A  L   +  KG  P   T + L+ G 
Sbjct: 512 MYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGF 571

Query: 697 SVGEEIDSRRFAFDS 711
            +  ++   R   D+
Sbjct: 572 CINRKLSQARRLLDT 586


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 206/430 (47%), Gaps = 22/430 (5%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF  ++  FN +L  +  E R  ++ + ++ +M K    PNV T   L+  L    R+  
Sbjct: 45  GFHPTLVTFNTLLHGLCVEDR-VSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVE 99

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCII 279
           A+    RM + G  PN  T+  ++ G+        ++++L +M +L  I+ ++  Y+ II
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             L ++ +  +A  LF  M+   + PD +TY  +IN  C + +  +A  +L++M+V  ++
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLA--- 392
           P    F  ++  L + G  + + + L++       P+    N LL+  C++GK   A   
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 393 -KCILEKMADRKIA--------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            K + + M D            D  ++NI I  L    +  +A EL   M    +VPD  
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTV 339

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TYS+ + G CK    ++A ++F  + ++S   + ++++ L+ G C+   + + +E+FC M
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
            + G   ++ ++  LI G   +  ++ ++ +     SSG    T T   ++ GL   +  
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459

Query: 564 KDLLVVLAQM 573
           K  L +L ++
Sbjct: 460 KRALAMLEEL 469



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 218/489 (44%), Gaps = 53/489 (10%)

Query: 161 GFKLSVDV--FNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           G ++  D+  FN+++       K  FA  +  + ++ K G  P + T N LL  L   +R
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFA--LSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +  ALD F +M    C PN  TF  ++ GL    RV ++V++L  M + G+Q     Y  
Sbjct: 66  VSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121

Query: 278 IIPMLCRENKLEEAIRLFKMMRALD-LMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
           I+  +C+      A+ L + M  L  + PD + Y  +I+ L ++ R  DA ++  +M   
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+ P      DIV   C +  F                         C++GK+  A+ +L
Sbjct: 182 GIFP------DIVTYSCMINGF-------------------------CSSGKWSEAQRLL 210

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           ++M  RKI+ D  +++  I  L +  ++  A +LL  M+ S V P+  T +  + G C  
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 456 CNYEDALRVFRQVSAQSLVLDSI-----------SYSKLVEGLCQVEKITEAVEVFCCMS 504
              +DAL +F+ +    + +D+            +Y+ L+ GL    K  EA E++  M 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
             G    + +++ +I GLC   ++D+A ++     S   S    T+  ++ G  K     
Sbjct: 331 HRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D L +  +M   G   +   Y  LI+   +   +      F  M+ +G+ PD  T+ ++L
Sbjct: 391 DGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNML 450

Query: 625 HGLADGSQL 633
            GL    +L
Sbjct: 451 TGLWSKEEL 459



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 212/459 (46%), Gaps = 22/459 (4%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           +F I+IK   + S++  ++S  G++  LG    L  +  ++  LC E+++ EA+ LF  M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                 P+ +T+  L+N LC   R+ +A  +L+ M+  GL P    +  IV G+C++G  
Sbjct: 77  ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 359 DESVNFLE--DKCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
             ++N L   ++  ++      ++A+++     G+   A+ +  +M D+ I  D  +++ 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I   C + +  +A  LL  M+V  + PD  T+S  +    K  +   A  + +++ +  
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK-----------NGCSLSSSSFNILIYG 521
           +  + ++ + L++GLC   K+ +A+E+F  M K           NG      ++NILI G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           L    K  +A  L       G    T TY+ ++ GL K  R  +   +   M  +  + +
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           +  +  LI    +   + D    F  M + G+V +  T ++L+ G      ++       
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 642 KLVSDSEVLDSSMYNILINGLW-KEGLTSQASYLLDLML 679
           +++S     D+     ++ GLW KE L    + L +L +
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQM 471



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 179/439 (40%), Gaps = 18/439 (4%)

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
             L +  D  ++  LI C C   +L  A      +  +G  PT   F  ++ GLC   + 
Sbjct: 7   HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWL 417
            E+++     C         L+   C  G+   A  +L++M +  +     ++   +  +
Sbjct: 67  SEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 418 CENEEIRKAYELLGRMV-VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           C+  +   A  LL +M  +S + PD   YSA + G  K   + DA  +F ++  + +  D
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            ++YS ++ G C   K +EA  +   M     S    +F+ LI  L     ++ A  L  
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM-----------LVEGCALDVEAY 585
              SSG      T   ++ GL    + KD L +   M              G   DV+ Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
            ILI  +  + K  +    +  M   G+VPD  T  S+++GL   S+L   +   + + S
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGE 700
            S   +   +N LI G  K G+      L   M  +G V +A T+     G     ++  
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 701 EIDSRRFAFDSSSFPDSVS 719
            +D  +    S  +PD+++
Sbjct: 427 SLDIFQEMISSGVYPDTIT 445


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 225/513 (43%), Gaps = 39/513 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFEIVIK 245
           V+  ++K G   ++  LN  L  +   +    A+  F RM + G     PN  T+ IVI 
Sbjct: 49  VFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPRAGATSAAPNIATYGIVIG 107

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRALDLM 304
                 R+D + + +G +   G+++    ++ ++  LC   +  +A+ +  + M  L   
Sbjct: 108 CCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCK 167

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMI-VIGLTPTDDV-FVDIVRGLCEVGKFDESV 362
           PD  +Y  L+  LC++     A D+L  M    G  P D V +  ++ GL   G+ D+  
Sbjct: 168 PDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDK-- 225

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENE 421
                                        A  + + M DR  + D  +++  I  L + +
Sbjct: 226 -----------------------------AYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 256

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + KA ++  RMV + V+PDC  Y++ V G C     ++A+ +F+++    +  D ++Y+
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 316

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L++ LC+  K TEA ++F  + K G    S+++  L++G      + +   L  L    
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 376

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       +  IM    K  +  + L+V + M  +G   D+  Y  ++  +    ++ D 
Sbjct: 377 GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 436

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              FN +   GL P+     +L+HGL    +   V     +++     LD+  +N ++  
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGN 496

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L K+G   +A  L DLM+  G  P+  T+  L+
Sbjct: 497 LCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLI 529



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 241/561 (42%), Gaps = 32/561 (5%)

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
           +V  A  ++  S  N     GA     N         +  + +V+G     + G  D  F
Sbjct: 71  DVARASPAVAISLFNRMPRAGATSAAPN---------IATYGIVIGCC--RRLGRLDLAF 119

Query: 189 -VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKG 246
                ++  G+  +    + LL+ L +  R   A+D   RRM + GC P+  ++ I++KG
Sbjct: 120 ATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKG 179

Query: 247 LIANSRVDDSVSILGEMFDLGIQ--LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           L  +     ++ +L  M D   +  L++  YT +I  L RE +L++A  LF  M      
Sbjct: 180 LCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS 239

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD +TY  +I+ L +   +D A  +   M+  G+ P   ++  +V G C  GK  E++  
Sbjct: 240 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 299

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCE 419
            +  C +   P    + AL++  C  GK   A+ I + +  R    D  ++   +     
Sbjct: 300 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYAT 359

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              + + ++LL  M+   +      ++  +    K    ++AL VF  +  Q L  D ++
Sbjct: 360 EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVN 419

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y  +++ LC   ++ +A+  F  +   G + +   F  LI+GLC   K DK   L     
Sbjct: 420 YGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMI 479

Query: 540 SSGTSYTTSTYTKIMLGLVKLQR---AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
             G    T  +  IM  L K  R   AK+L  ++ ++ +E    +   Y  LI       
Sbjct: 480 DRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE---PNTNTYNTLIDGYCLDG 536

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS-DSEVLDSSM- 654
           K+ +      VMV  G+ P   T  ++++G    SQ   +  G+  L   D + ++  + 
Sbjct: 537 KMDEAMKLLGVMVFNGVKPSDVTYNTIINGY---SQNGRIEDGLTLLREMDGKGVNPGIV 593

Query: 655 -YNILINGLWKEGLTSQASYL 674
            Y +L+ GL++ G T  A  L
Sbjct: 594 TYEMLLQGLFQAGRTVAAKEL 614



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 5/324 (1%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + ++K+M + G+ P+V T   L++ L +  +   A   F  + K+G  P+S T+  ++ G
Sbjct: 297 IGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG 356

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 + +   +L  M   G+QL    +  I+    + NK++EA+ +F  MR   L PD
Sbjct: 357 YATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPD 416

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE----SV 362
            + Y  +++ LC   R+DDA      +   GL P   VF  ++ GLC   K+D+    + 
Sbjct: 417 IVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAF 476

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
             ++      T   NA++   C  G+   AK + + M    I  + +++N  I   C + 
Sbjct: 477 EMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDG 536

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           ++ +A +LLG MV + V P   TY+  + G  +    ED L + R++  + +    ++Y 
Sbjct: 537 KMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 596

Query: 482 KLVEGLCQVEKITEAVEVFCCMSK 505
            L++GL Q  +   A E++  M K
Sbjct: 597 MLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/492 (21%), Positives = 211/492 (42%), Gaps = 42/492 (8%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G ++S  +F+ +L  + + +R       V + M + G  P++ +   LL+ L +    + 
Sbjct: 129 GLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQ 188

Query: 221 ALDQFRRM--HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           ALD    M  HK  C  +   +  VI GL+   ++D + S+   M D G   ++  Y+ I
Sbjct: 189 ALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSI 248

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  L +   +++A ++F  M    +MPD + Y  L++  C + +  +A  I + M   G+
Sbjct: 249 ISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV 308

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFFLAKC 394
            P    +  ++  LC+ GK  E+    +   K G+   ++ +  LL      G       
Sbjct: 309 EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHD 368

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +L+ M  + +      +N+ +    ++ ++ +A  +   M    + PD   Y   +   C
Sbjct: 369 LLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILC 428

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK--------------------- 492
                +DAL  F  + ++ L  + + ++ L+ GLC  +K                     
Sbjct: 429 TAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTI 488

Query: 493 --------------ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
                         + EA  +F  M + G   +++++N LI G C+  K+D+A++L  + 
Sbjct: 489 FFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVM 548

Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
             +G   +  TY  I+ G  +  R +D L +L +M  +G    +  Y +L+Q + +  + 
Sbjct: 549 VFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRT 608

Query: 599 KDCALFFNVMVK 610
                 +  M+K
Sbjct: 609 VAAKELYLRMIK 620



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 17/301 (5%)

Query: 115 MEGLCQNMVKERYPNVREALI-------SLVFSFVNH-YRVNGA---MRVLVN-MNSGGF 162
           M+ LC+N        + ++L+       S  +  + H Y   GA   M  L++ M   G 
Sbjct: 319 MDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGM 378

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           +L   +FN+++GA  +  +   + + V+  M + G+ P++     +L++L    R++ AL
Sbjct: 379 QLGHHIFNMIMGAYAKHNK-VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 437

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
            QF  +  +G  PN   F  +I GL    + D    +  EM D GI L+  F+  I+  L
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 497

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C++ ++ EA  LF +M  + + P+  TY  LI+  C + ++D+A  +L  M+  G+ P+D
Sbjct: 498 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 557

Query: 343 DVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEK 398
             +  I+ G  + G+ ++ +  L +  G   +P    +  LL+    AG+   AK +  +
Sbjct: 558 VTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLR 617

Query: 399 M 399
           M
Sbjct: 618 M 618



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 50/250 (20%)

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV--FCCMSKNGC 508
           G+ +     DA +VF ++  +    D  S   L   L  V + + AV +  F  M + G 
Sbjct: 36  GRQRATEPGDAHQVFDRLLKRG---DRASIFDLNRALSDVARASPAVAISLFNRMPRAGA 92

Query: 509 SLSSSSFNILIYGLCV-----MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           +  S++ NI  YG+ +     + ++D A        ++G   +   ++ ++ GL   +R 
Sbjct: 93  T--SAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRT 150

Query: 564 KDLL-VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR--ETM 620
            D + +VL +M   GC  D+ +Y IL++                     GL  D+  +  
Sbjct: 151 SDAMDIVLRRMPELGCKPDLFSYTILLK---------------------GLCDDKTSQQA 189

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           L LLH +AD    H               LD   Y  +INGL +EG   +A  L D ML 
Sbjct: 190 LDLLHIMAD----H----------KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLD 235

Query: 681 KGWVPDATTH 690
           +G  PD  T+
Sbjct: 236 RGPSPDVVTY 245


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 242/539 (44%), Gaps = 32/539 (5%)

Query: 168 VFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           V+N ++   + E R   D V  +YK+++ AG  P+V T N LL  L +  R+E A   F 
Sbjct: 112 VYNRLILTALRESR--LDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFE 169

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M  +    N  +F I+ +G     R  D++ +L  M      + L     ++   C+E 
Sbjct: 170 AMPVR----NEFSFGILARGYCRAGRSVDALKVLDGM----PSMNLVVCNTVVAGFCKEG 221

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM---IVIGLTPTDD 343
            +EEA RL + MR   L P+ +T+   I+ LC+  R+ DA  I +DM      GL   D 
Sbjct: 222 LVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQ 281

Query: 344 VFVDI-VRGLCEVGKFDESVNFLE-DKCGYV---TSPHNALLECCCNAGKFFLAKCILEK 398
           V  D+ + G C+ G  DE+   ++  +CG        +N  L      G+   A  +L +
Sbjct: 282 VTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLRE 341

Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           MA  +I  +  ++NI +  LC+  +   A  +   +    + PD  TY++ +   C   N
Sbjct: 342 MAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGN 401

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
              A R+  +++ +    +S +Y+ L++ L +  + TEA  +   MS+ G SL ++  NI
Sbjct: 402 IAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNI 461

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           +I GLC   K+D A+ +    +  G++            L +L  +  L VV    + + 
Sbjct: 462 IIDGLCRNSKLDVAMGIVDGMWEEGST-----------ALGRLGNSF-LSVVSDSSISQR 509

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           C  D   Y ILI ++ ++ +  +       M+   + PD     + +HG     +  L  
Sbjct: 510 CLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAI 569

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             +  +        +  YN+LI G  ++  + +   L+  M  KG  P+  T+  L+ S
Sbjct: 570 KVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKS 628



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 215/508 (42%), Gaps = 51/508 (10%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHT--ADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           L+R L +   +  A ++F+ + ++  F     A  YC+    +     ++ M  +  N+V
Sbjct: 151 LLRALCDAGRMELAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSM--NLV 208

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
                       ++V  F     V  A R++  M   G   +V  FN  + A+ +  R  
Sbjct: 209 ---------VCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGR-V 258

Query: 184 ADFVFVYKEMV---KAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            D   ++K+M    + G+  P+  T + +L    +   ++ A      M   G      +
Sbjct: 259 LDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVES 318

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +   + GL+ N RV ++  +L EM    I      Y  I+  LC+E K  +A R+   +R
Sbjct: 319 YNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIR 378

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
           +  + PD +TY  L++  C    +  AN IL++M   G  P    +  +++ L   G+  
Sbjct: 379 SGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTT 438

Query: 360 ESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
           E+   LE   + GY   T+  N +++  C   K  +A  I++ M                
Sbjct: 439 EAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGM---------------- 482

Query: 416 WLCENEEIRKAYELLGRMVVSSV---------VPDCATYSAFVLGKCKLCNYEDALRVFR 466
           W    EE   A   LG   +S V         +PD  TYS  +   CK   +++A +   
Sbjct: 483 W----EEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLL 538

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++  + +  DS+ Y   + G C+  K + A++V   M K GC+ S+ ++N+LI G     
Sbjct: 539 EMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKH 598

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           K D+ ++L S     G S    TY  ++
Sbjct: 599 KSDEIMKLMSEMEEKGVSPNVLTYNSLI 626


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 156/658 (23%), Positives = 267/658 (40%), Gaps = 49/658 (7%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTY-CKMILKLGLAGNV-EEMEGLCQNMVKER 126
           V D  +D    L  F+W S Q    ++ D + C  +LKL     V +E+E L + M  + 
Sbjct: 67  VFDQIHDPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKE 126

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
                EAL     SFV          +     SG  K +++++N V+             
Sbjct: 127 LIPTCEAL-----SFV----------ISAYAGSGLVKEALELYNTVIDV----------- 160

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
                       VP+V   N LL +L    ++E A   +  M  +    ++ T  IV KG
Sbjct: 161 ---------HNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKG 211

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    +V++   ++ + +  G    + FY  +I   C+   +E A  LFK ++    +P 
Sbjct: 212 LCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPT 271

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV----RGLCEVGKFDESV 362
             TY  +IN  C+  + +  + +L +M   GL  +  +F  I+    +  CE+   D   
Sbjct: 272 VKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVR 331

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
             +E  C    + +N L+   C+ GK   A+ +LE    R +  +  S+   I    +N 
Sbjct: 332 WMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNG 391

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           E  +A ELL  M       D   Y A V G       + AL V  ++  + ++ D+  Y+
Sbjct: 392 EYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYN 451

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GLC+  +   A ++   M     +  +     L+ G      +D+A +L  L    
Sbjct: 452 VLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIER 511

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G   +      ++ G  K     D L+   +M     + D   Y  +I    +QN L+  
Sbjct: 512 GIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGA 571

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              F +M+K    P+  T  SL++G      L+       ++ S     +   Y ILI  
Sbjct: 572 LRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGY 631

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG---SSVGEEIDSRRFAFDSSSFPD 716
             KEG  ++A +  + ML    +P+  T   LV    ++ G  I S+R    S+S P+
Sbjct: 632 FCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKR----SNSQPN 685



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 135/595 (22%), Positives = 258/595 (43%), Gaps = 47/595 (7%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
           D YCK        G++E    L + + VK   P V+    +++ +F    +     ++LV
Sbjct: 245 DGYCK-------NGDIERANLLFKELKVKGFLPTVK-TYGAMINAFCKKGKFEAVDKLLV 296

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRG----FADFVFVYKEMVKAGIVPNVDTLNYLLEV 211
            M   G  +S+ +FN ++ A    K G     AD V   + M+++G  P++ T N L+  
Sbjct: 297 EMKERGLAVSLQIFNGIIDARF--KHGCEIEAADAV---RWMIESGCEPDMATYNTLING 351

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
                ++  A +      ++G  PN  ++  +I     N     +  +L EM + G  L+
Sbjct: 352 SCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLD 411

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           L  Y  ++  L    +++ A+ +   M    ++PD   Y  L++ LC+  R   A  +L 
Sbjct: 412 LIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLV 471

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTS--PHNALLECCCNAG 387
           +M+   +TP   V   +V G    G  DE+    +   + G  TS    NA+++  C  G
Sbjct: 472 EMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531

Query: 388 KFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A    ++M +     D  +++  I    +  ++R A  + G M+  +  P+  T++
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G C+  +   A +VF ++ +     + ++Y+ L+   C+  K+T+A   F  M  N
Sbjct: 592 SLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLIN 651

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
            C  + ++FN L+ GL              +A SS  S +    T    G+         
Sbjct: 652 KCIPNDATFNYLVNGL---------TNNNGIAISSKRSNSQPNLTLEFFGM--------- 693

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
                 M+ +G    + AY  ++  + +   +K      + M+  G  PD  + ++LLHG
Sbjct: 694 ------MISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHG 747

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
           L    +L   ++ I    ++ ++  +  Y+  ++    EGLTS AS LL  ++ K
Sbjct: 748 LCLEGRLQDWNNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLVEK 802


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 230/524 (43%), Gaps = 14/524 (2%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R + A  +L  M + G K S     ++L A+ E K    D    Y   V      +V + 
Sbjct: 19  RFSRAYELLKEMEALGIKKSQVTHGIILKALCERKE--VDQALSYFHSVSPRSDLDVVSY 76

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGC-CPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
             L+  L ++ RI+ A + F  M   G  C  + T   +I  L    R D +++    M 
Sbjct: 77  TTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYT--AIINALFKAHRPDQAIACFERMV 134

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
                 +L  +T +I  LC+  KL  A  +F+ M      PD + Y  L++ L +   +D
Sbjct: 135 ARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMD 194

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCC 384
           +A  +L++++  G+ PT+  +   + GLC+ G+ +E+   + +  G + +    +L C  
Sbjct: 195 EARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM-GKMCAAE--VLHCIF 251

Query: 385 NA----GKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                 GK   A  + ++M  + +  D   +   I  L       +A E+   MV    V
Sbjct: 252 GGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCV 311

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY   V   CK    + A +V   + A  L  +   Y+ L++G   V +  EA+ V
Sbjct: 312 PDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINV 371

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVM-RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +  M +     S  ++NIL+ GLC + +  D  + LR +    G   T  +Y  ++ GL 
Sbjct: 372 YSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLG 431

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K  RA + + V  +M+  G   D  +   LIQ+++  +++ +       M + G+ PD  
Sbjct: 432 KAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDAL 491

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
              +L+  L  G+++      + +++ +S V D S +  +  G 
Sbjct: 492 AYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 241/568 (42%), Gaps = 58/568 (10%)

Query: 164 LSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           L V  +N+V+  +    R F+    + KEM   GI  +  T   +L+ L E   ++ AL 
Sbjct: 2   LDVASYNIVIRGLCLAGR-FSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALS 60

Query: 224 QFRRMHKKGCCPNSR----TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            F  +      P S     ++  +I GL  + R+D +  +  EM   G Q  ++ YT II
Sbjct: 61  YFHSVS-----PRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVA-YTAII 114

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
             L + ++ ++AI  F+ M A    PD  T+  +I  LC+  +L+ A ++ ++M   G  
Sbjct: 115 NALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWK 174

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
           P   V+  +V GL +    DE+   L++       P                        
Sbjct: 175 PDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEV--------------------- 213

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYEL---LGRMVVSSVVPDCATYSAFVL-GKCKL 455
                    ++   I  LC+N  + +A +L   +G+M  + V+     +  +VL GK   
Sbjct: 214 ---------TYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLH--CIFGGYVLEGK--- 259

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              E+AL +  ++  + + LD   Y+ L+ GL  V +  EA E+F  M + GC   + ++
Sbjct: 260 --IEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTY 317

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            +++   C   K+  A ++  +  ++G       Y  +M G + + RA++ + V + ML 
Sbjct: 318 GMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLR 377

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV-KAGLVPDRETMLSLLHGLADGSQLH 634
           +     +  Y IL+  + +  +  D  L    M  + G+VP   +  +L+HGL    +  
Sbjct: 378 KMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRAD 437

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                  ++V +  V D      LI  L       +A+ LL  M   G  PDA  +  LV
Sbjct: 438 EAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALV 497

Query: 695 -----GSSVGEEIDSRRFAFDSSSFPDS 717
                G+ VG   D      D+S  PD 
Sbjct: 498 KVLCGGAKVGPAWDVLVEMMDNSCVPDG 525



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 206/468 (44%), Gaps = 30/468 (6%)

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
           L+++ Y  +I  LC   +   A  L K M AL +   ++T+  ++  LCE   +D A   
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSY 61

Query: 330 LEDMIVIGLTPTDDV----FVDIVRGLCEVGKFDESVNFLEDKCGYVTS---PHNALLEC 382
                   ++P  D+    +  ++ GL + G+ D +    E+     +     + A++  
Sbjct: 62  FHS-----VSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINA 116

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
              A +   A    E+M  RK   D  ++ + I  LC+  ++ +A E+   M      PD
Sbjct: 117 LFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPD 176

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
              Y++ V G  K    ++A ++ +++ ++ +    ++Y+  + GLC+  ++ EA ++  
Sbjct: 177 IIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVR 236

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M K     ++   + +  G  +  K+++A+ L+      G +     YT ++ GL  ++
Sbjct: 237 EMGK---MCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVR 293

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           R  +   +   M+ +GC  D   Y +++    +Q K++       +M  AGL  +     
Sbjct: 294 RNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYN 353

Query: 622 SLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           SL+ G    ++    +++ S+ + K+V  S V     YNIL+ GL K G T+ A  +L  
Sbjct: 354 SLMDGFLGVNRAREAINVYSTMLRKMVKPSIV----TYNILMLGLCKLGQTADARLVLRE 409

Query: 678 MLGK-GWVPDATT-----HGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           M  + G VP   +     HGL       E ID      D+   PD  S
Sbjct: 410 MRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPS 457



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 33/238 (13%)

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           +LD  SY+ ++ GLC   + + A E+   M   G   S  +  I++  LC  ++VD+A+ 
Sbjct: 1   MLDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALS 60

Query: 534 ----------LRSLAY-----------------------SSGTSYTTSTYTKIMLGLVKL 560
                     L  ++Y                       SS  S     YT I+  L K 
Sbjct: 61  YFHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKA 120

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            R    +    +M+   C  D+  + ++I  + +  KL      F  M + G  PD    
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
            SL+ GL+  S +      + ++VS         Y   I+GL K G   +A  L+  M
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM 238


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 206/460 (44%), Gaps = 41/460 (8%)

Query: 167 DVFNVVLGAIVEEKRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           D ++ V+ ++   K G  A  + V++ M     VP++ T N L+           ALD F
Sbjct: 11  DAYDFVVQSLA--KAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF 68

Query: 226 RRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           + M + K   P+  T+  +I GL ++   + +  +L EM D  I   +  Y+ II  L +
Sbjct: 69  QSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVK 128

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           E K EE+ ++ + M A    PD   +  ++     +  ++ A ++ + M+  G  P +  
Sbjct: 129 EAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS 188

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK- 403
           +  ++ GL ++GK DES+                                IL +MA R  
Sbjct: 189 YHILIHGLAKIGKLDESLK-------------------------------ILSEMAMRAA 217

Query: 404 --IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
             + +  +++  I  LC   E+ KA E+ G M+ +   P+  TY+  + G C+      A
Sbjct: 218 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQA 277

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS--SFNILI 519
             +F +++   +  D+++Y+ L+ G C+   + EA +++  MS  G  L  +  +FN LI
Sbjct: 278 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS-GGAGLQPTIVTFNTLI 336

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C + K+ +A  L +   + G +  T TY  ++ GL +  +  + L V  QM  +   
Sbjct: 337 DGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           LD  +    +  + +   +      F    K+G VP+ ET
Sbjct: 397 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPET 436



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 213/474 (44%), Gaps = 34/474 (7%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           D +++ L     L+ AL++F+ +  +        TY  +I     AG   +   L Q+M 
Sbjct: 14  DFVVQSLAKAGMLAQALEVFETMKSESCVPSLV-TYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 124 KE-RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRG 182
           +E R    R    +L+    +     GA ++L  M       +V  ++ ++ ++V+E + 
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
              +  V +EM+ AG  P+V   N +++    +N +E A + ++ M + G  P++ ++ I
Sbjct: 133 EESYK-VLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 243 VIKGLIANSRVDDSVSILGEMF--DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
           +I GL    ++D+S+ IL EM     G    +  ++ +I  LCR  +LE+A+ +F  M  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
               P++ TY  LI  LC   ++  A ++ E M    + P    +  ++ G C+ G  DE
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 361 SVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN 420
           +     +  G               AG   L   I+            ++N  I   C+ 
Sbjct: 312 AEKLYREMSG--------------GAG---LQPTIV------------TFNTLIDGFCKL 342

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            ++ +A EL+  M    +  D  TY   + G  +    ++AL V++Q+  +  +LD +S 
Sbjct: 343 GKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 402

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
              V GLC+   I +A  VF    K+G   +  +F IL   L  + +V+ A +L
Sbjct: 403 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 205/495 (41%), Gaps = 48/495 (9%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M KA      D  +++++ L +   +  AL+ F  M  + C P+  T+ ++I     NSR
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLI-----NSR 55

Query: 253 VDDSVSILGEMFDL--------GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            +      G+  DL         ++ +   Y  +I  LC     E A +L   MR  ++ 
Sbjct: 56  CN--AGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIA 113

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            +  TY  +I  L +  + +++  +LE+M+  G  P    F  +++G       +++   
Sbjct: 114 ANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREV 173

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
            +        P N                               S++I I  L +  ++ 
Sbjct: 174 YQHMVESGYKPDNV------------------------------SYHILIHGLAKIGKLD 203

Query: 425 KAYELLGRMVVSSV--VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           ++ ++L  M + +   VP+  T+S  + G C+    E AL VF  +       +  +Y+ 
Sbjct: 204 ESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 263

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSS 541
           L+ GLC+ EK+ +A E+F  M++      + ++N LI G C    +D+A +L R ++  +
Sbjct: 264 LIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 323

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G   T  T+  ++ G  KL +      ++A+M  +G A D   Y ILI  +S   KL + 
Sbjct: 324 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEA 383

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
              +  M +   + D  + +S + GL     +    +          V +   + IL   
Sbjct: 384 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 443

Query: 662 LWKEGLTSQASYLLD 676
           L K G    A  L++
Sbjct: 444 LIKLGRVEDAQKLME 458



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 148/361 (40%), Gaps = 44/361 (12%)

Query: 343 DVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
           D +  +V+ L + G   +++   E    + C      +N L+   CNAG+F  A  + + 
Sbjct: 11  DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70

Query: 399 MADRKIADCDSW--NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           M   K  + D W  N  I  LC +     A +LL  M   ++  +  TYS+ +    K  
Sbjct: 71  MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             E++ +V  ++ A     D  +++ +++G  +   + +A EV+  M ++G    + S++
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS--TYTKIMLGLVKLQRAKDLLVVLAQML 574
           ILI+GL  + K+D+++++ S        Y  +  T++ ++ GL +    +  L V   ML
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             GC  +   Y  LI  +    K+      F  M +A + PD                  
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPD------------------ 292

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL-DLMLGKGWVPDATTHGLL 693
                            +  YN LI G  K G   +A  L  ++  G G  P   T   L
Sbjct: 293 -----------------AVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 335

Query: 694 V 694
           +
Sbjct: 336 I 336



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 8/268 (2%)

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-CSLSSSSFNIL 518
            AL VF  + ++S V   ++Y+ L+   C   +  +A+++F  M +         ++N L
Sbjct: 28  QALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTL 87

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I GLC     + A +L S       +    TY+ I+  LVK  + ++   VL +M+  GC
Sbjct: 88  ISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGC 147

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV A+  ++Q  +  N ++     +  MV++G  PD  +   L+HGLA   +L     
Sbjct: 148 NPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLK 207

Query: 639 GINKLV--SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG 695
            ++++   +   V +   ++ LI+GL + G   +A  +   ML  G  P+  T+  L+ G
Sbjct: 208 ILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAG 267

Query: 696 SSVGEEIDSRRFAFDSSS----FPDSVS 719
               E++   R  F+  +     PD+V+
Sbjct: 268 LCRAEKVIQARELFEKMTQACIPPDAVA 295



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/355 (18%), Positives = 136/355 (38%), Gaps = 53/355 (14%)

Query: 50  YEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
           Y + I+SL     P+   +VL+          +F +  + + F  +              
Sbjct: 119 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARS-------------- 164

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL--VNMNSGGFKLSVD 167
            N+E+   + Q+MV+  Y     +   L+       +++ ++++L  + M + G+  +V 
Sbjct: 165 NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVI 224

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            F+ ++  +          + V+  M++AG  PN  T   L+  L    ++  A + F +
Sbjct: 225 TFSTLIHGLCRTGE-LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283

Query: 228 MHKK------------------------------------GCCPNSRTFEIVIKGLIANS 251
           M +                                     G  P   TF  +I G     
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++  +  ++ EM   G+  +   Y  +I  L R  KL+EA+ ++K MR    + D ++  
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             +  LC+   +D A  + E     G  P  + F  +   L ++G+ +++   +E
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/567 (23%), Positives = 244/567 (43%), Gaps = 49/567 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  LG  G  +E++   +  + +           L+ +    + V+ A +VL+ M
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETN 216
                  +V  F+ V+   V  KRG  D    YK M+K  GI PNV T   L++  F+  
Sbjct: 406 EEKSISPNVVTFSSVINGFV--KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             ++AL+ +  M  +G   N    + ++ GL  N ++++++++  +    G+ L+   YT
Sbjct: 464 GQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  L +   +  A +  + +   +++PD + Y   INCLC   +  +A  IL +M  +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNM 583

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED---------------------------KC 369
           GL P    +  ++   C  G+  +++  L +                           K 
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 370 GYVT--------SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            Y+         SP    H  +L+ C  + +  +   I E M +  + AD   +N  ++ 
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC +   RKA  +L  M+ S + PD  T++A +LG CK  + ++A   + Q+  Q++  +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +++ L+ GL  V +I EA  V   M K+G   ++ +++IL+ G        +A+RL  
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYC 823

Query: 537 LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                G     STY  ++    K   + +AK+L      M   G       Y IL+   S
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL---FKDMQKRGVHPTSCTYDILVSGWS 880

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETM 620
                 +       M + G  P + T+
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTL 907



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 143/637 (22%), Positives = 259/637 (40%), Gaps = 41/637 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY   I+       VEE   L + MV+         L +LV       R + A  +   M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           +  G   +   +  ++ ++ +  RG  + + +  EMV  G+V ++ T   L++ L +  +
Sbjct: 301 DKVGAVPNHVTYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            +   D  R         N  T+ ++I  L     VD++  +L EM +  I   +  ++ 
Sbjct: 360 TDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +   L++A    +MM+   + P+ +TY  LI+   +    D A ++  DM+  G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG---------YVT----------SP--- 375
           +     +   +V GL + GK +E++   +D  G         Y T           P   
Sbjct: 480 VEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 376 -----------------HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
                            +N  + C C  GKF  AK IL +M +  +  D  ++N  I   
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSH 599

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C   E  KA +LL  M +SS+ P+  TY+  V G       E A  +  ++ +      S
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           +++ ++++   Q  ++   +++   M   G     + +N L+  LC      KA  +   
Sbjct: 660 LTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              SG +  T T+  ++LG  K     +     AQML +  + ++  +  L+  +    +
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           + +       M K+GL P+  T   L+ G    S          ++V    V   S YN 
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           LI+   K G+ +QA  L   M  +G  P + T+ +LV
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 132/600 (22%), Positives = 257/600 (42%), Gaps = 43/600 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV  F    +V+ A  VL  M   G   +V  +   +      K G  +   +Y+ MV+
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK-GVEEAFDLYEGMVR 267

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G++ +V TL+ L+  L    R   A   FR M K G  PN  T+  +I  L    R  +
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKE 327

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +S+LGEM   G+ ++L  YT ++  L ++ K +E     +   + +L  + +TY  LI+
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLID 387

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----------- 364
            LC+   +D+A  +L +M    ++P    F  ++ G  + G  D++  +           
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 365 --------------LEDKCGYVTSPHNALLECCCNAGKFFLAKC---------ILEKMAD 401
                          + +   +   H+ L E      KF +            I E MA 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV-EVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 402 RKIA-------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            K A       D  ++   I  L +  ++  A++    ++  +++PD   Y+ F+   C 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCI 566

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L  +++A  +  ++    L  D  +Y+ ++   C+  +  +A+++   M  +    +  +
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N L+ GL     V+KA  L +   S+G S ++ T+ +++    + +R   +L +   M+
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D+  Y  L+Q +      +   +    M+ +G+ PD  T  +L+ G    S L 
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   +++  +   + + +N L+ GL   G   +A  +L  M   G  P+  T+ +LV
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILV 806



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 124/535 (23%), Positives = 220/535 (41%), Gaps = 51/535 (9%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL---DQ 224
            +N++L A+ +     A    V  EM K G+  +  T+N LL  L    ++++A    D+
Sbjct: 105 AYNILLAALSDHAHAPA----VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR 160

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              +H          +  +I G         ++S+   M   G+ +++  Y  ++   CR
Sbjct: 161 GGGIHALDVI----GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +++ A  +  MM+   + P+  TY   I   C    +++A D+ E M+  G+      
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 345 FVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
              +V GLC  G+F E+       DK G V +                +  C L      
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPN---------------HVTYCTL------ 315

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV--LGK-CKLCNYE 459
                      I  L +    ++   LLG MV   VV D  TY+A +  LGK  K    +
Sbjct: 316 -----------IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           D LR      + +L L+ ++Y+ L++ LC+   + EA +V   M +   S +  +F+ +I
Sbjct: 365 DTLRF---ALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G      +DKA   + +    G +    TY  ++ G  K Q     L V   ML EG  
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVE 481

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           ++      L+  + +  K+++    F     +GL  D     +L+ GL     +      
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +L+  + + D+ +YN+ IN L   G   +A  +L  M   G  PD +T+  ++
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMI 596



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 121/557 (21%), Positives = 230/557 (41%), Gaps = 41/557 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V   M   G+  +V   N L+       ++++A      M + G  PN  T+   I    
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               V+++  +   M   G+ L++   + ++  LCR+ +  EA  LF+ M  +  +P+ +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHV 310

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE---SVNF- 364
           TY  LI+ L +  R  +   +L +M+  G+      +  ++  L + GK DE   ++ F 
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
           L D        +  L++  C A     A+ +L +M ++ I+ +  +++  I    +   +
Sbjct: 371 LSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA E    M    + P+  TY   + G  K    + AL V+  +  + + ++      L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSL 490

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG---------------------- 521
           V GL Q  KI EA+ +F   S +G SL   ++  LI G                      
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 522 -------------LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                        LC++ K  +A  + +   + G     STY  +++   +       L 
Sbjct: 551 LPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L +M +     ++  Y  L+  +     ++      N MV AG  P   T   +L   +
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              +L ++      +++     D ++YN L+  L   G+T +A+ +L+ MLG G  PD  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 689 T-HGLLVGSSVGEEIDS 704
           T + L++G      +D+
Sbjct: 731 TFNALILGHCKSSHLDN 747



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 1/289 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L   G VE+ + L   MV   +         ++ +     R++  + +   M
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G    + V+N +L  +          V V +EM+ +GI P+  T N L+    +++ 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATV-VLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +++A   + +M  +   PN  TF  ++ GL +  R+ ++ ++L EM   G++     Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++    +++   EA+RL+  M     +P   TY  LI+   +   +  A ++ +DM   G
Sbjct: 805 LVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
           + PT   +  +V G   +    E    L+D      SP    L   C A
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 197/434 (45%), Gaps = 17/434 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM++    PN  T    +    +   ++ A++   +M K GC P+   +  ++ G   +
Sbjct: 31  REMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEH 90

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            RVD+++ +L  M     +     Y   +  LC   + EE   L   M   D  P++ T+
Sbjct: 91  GRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATF 147

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK-C 369
             LIN LC+N  ++ A ++LE M   G  P    +  I+    +  + D+++  L+   C
Sbjct: 148 STLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLC 207

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRK 425
              T   NA+L+C C A +++ A  ++ KM  +   DC     ++NI I  LC+N +++ 
Sbjct: 208 KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK---DCRINEMTFNILIDSLCQNGQVKD 264

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A E+   M     +PD  TYS+ + G  +    E A  +FR +  ++   D  SY+  ++
Sbjct: 265 AIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLK 321

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC   +  +A E+   M    C  +  +FNILI  LC    V++AI +       G + 
Sbjct: 322 GLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITP 381

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  ++ G  +  R  D L  L+ M    C  D  +Y  +++ +    + KD     
Sbjct: 382 DIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLV 438

Query: 606 NVMVKAGLVPDRET 619
             M++    P+  T
Sbjct: 439 TEMLRKNCTPNEVT 452



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 201/449 (44%), Gaps = 40/449 (8%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  ++  LC   + E+A  L + M      P+E+T+   I   C+N  LD A ++LE M 
Sbjct: 10  YNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMP 69

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAK 393
             G TP   ++  +V G  E G+ DE++  L    C   T  +NA L+  C AG++    
Sbjct: 70  KYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVG 129

Query: 394 CILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            ++ +M  +     D +++  I  LC+N  +  A E+L +M     +PD  +Y+  +   
Sbjct: 130 ELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCF 189

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
                 +DAL++ + +  +    D+IS++ +++ LC+ ++  +AVE+   M K  C ++ 
Sbjct: 190 SDQARADDALKLLKSMLCKP---DTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINE 246

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSL-----------AYSSGTSYTTS------------- 548
            +FNILI  LC   +V  AI +  L            YSS  +  +              
Sbjct: 247 MTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRS 306

Query: 549 --------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                   +Y   + GL    R  D   ++A M+ E C  +   + ILI S+ ++  +  
Sbjct: 307 MPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNR 366

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               +  M K G+ PD  T  +L++G ++  +L      ++ +  +    D+  YN ++ 
Sbjct: 367 AIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEP---DTISYNSILK 423

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           GL +      A  L+  ML K   P+  T
Sbjct: 424 GLCRAERWKDAEKLVTEMLRKNCTPNEVT 452



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 193/419 (46%), Gaps = 30/419 (7%)

Query: 114 EMEGLCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGG 161
           ++   CQN + +R   + E +             +LV  F  H RV+ A+++L   N+  
Sbjct: 48  QIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLL---NTML 104

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
            + +   +N  L  +    R + +   +  EMV+    PN  T + L+  L +   +E A
Sbjct: 105 CRPNTVCYNAALKGLCIAGR-WEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYA 163

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           ++   +M K G  P+  ++  +I      +R DD++ +L  M     + +   +  ++  
Sbjct: 164 VEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKC 220

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC+  +  +A+ L   M   D   +E+T+  LI+ LC+N ++ DA ++ E M      P 
Sbjct: 221 LCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPD 280

Query: 342 DDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA 400
              +  ++ G  E G  + + + F    C      +NA L+  C A ++  A    E +A
Sbjct: 281 IVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAG---ELIA 337

Query: 401 DRKIADC----DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           D    DC     ++NI I  LC+   + +A ++  +M    + PD  TY+A + G  +  
Sbjct: 338 DMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQG 397

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
             +DAL+    +  +    D+ISY+ +++GLC+ E+  +A ++   M +  C+ +  +F
Sbjct: 398 RLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 18/442 (4%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  ++  L  A   E+ E L + M++   +PN      + + +F  +  ++ A+ +L  
Sbjct: 9   TYNTVLKGLCCAKQWEQAEELMREMIRNSCHPN-EVTFATQIRAFCQNGLLDRAVELLEQ 67

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G    V +++ ++    E  R       +   + +    PN    N  L+ L    
Sbjct: 68  MPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR----PNTVCYNAALKGLCIAG 123

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R E   +    M +K C PN  TF  +I  L  N  V+ +V +L +M   G   ++  Y 
Sbjct: 124 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 183

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            II     + + ++A++L K M      PD +++  ++ CLC+  R  DA +++  M+  
Sbjct: 184 TIISCFSDQARADDALKLLKSMLC---KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 240

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
                +  F  ++  LC+ G+  +++   E    Y   P    +++L+      G   +A
Sbjct: 241 DCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA 300

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
             +   M  R  AD  S+N  ++ LC       A EL+  MV    +P+  T++  +   
Sbjct: 301 FDLFRSMPCR--ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSL 358

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+      A+ V+ Q+    +  D  +Y+ L+ G  +  ++ +A++    M    C   +
Sbjct: 359 CQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDT 415

Query: 513 SSFNILIYGLCVMRKVDKAIRL 534
            S+N ++ GLC   +   A +L
Sbjct: 416 ISYNSILKGLCRAERWKDAEKL 437



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 183/427 (42%), Gaps = 18/427 (4%)

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
           + + PD  TY  ++  LC   + + A +++ +MI     P +  F   +R  C+ G  D 
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60

Query: 361 SVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRW 416
           +V  LE    Y  +P    ++ L+      G+   A  +L  M  R    C  +N  ++ 
Sbjct: 61  AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVC--YNAALKG 118

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC      +  EL+  MV     P+ AT+S  +   C+    E A+ V  Q+     + D
Sbjct: 119 LCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPD 178

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            +SY+ ++       +  +A+++   M    C   + SFN ++  LC  ++   A+ L +
Sbjct: 179 VVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVA 235

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                       T+  ++  L +  + KD + V   M    C  D+  Y  LI   SEQ 
Sbjct: 236 KMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG 295

Query: 597 KLKDCA--LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            L + A  LF ++  +A +     T    L GL   ++       I  +V++  + +   
Sbjct: 296 -LDEMAFDLFRSMPCRADIFSYNAT----LKGLCMAARWDDAGELIADMVTEDCLPNEVT 350

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFDSS 712
           +NILI+ L ++GL ++A  + + M   G  PD  T+  L+   S  G   D+ +F     
Sbjct: 351 FNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP 410

Query: 713 SFPDSVS 719
             PD++S
Sbjct: 411 CEPDTIS 417



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 3/120 (2%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +MV    +PN  T N L+  L +   +  A+D + +M K G  P+  T+  +I G     
Sbjct: 338 DMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQG 397

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R+DD++  L  M     + +   Y  I+  LCR  + ++A +L   M   +  P+E+T++
Sbjct: 398 RLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 454


>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 133/566 (23%), Positives = 242/566 (42%), Gaps = 56/566 (9%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           + DHL +++ +    S AL+ F+W S   +F H+  TY  +I KL +    + ++ L   
Sbjct: 37  TQDHLCQLILDQKTSSEALQTFRWASTFSKFTHSQSTYRTLIHKLCIFRRFDTVKQLLDE 96

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL----SVDVFNVVLGAIV 177
           M      N  E    +  + V      G  R ++ +    +K     S+ +FN +L  +V
Sbjct: 97  MPTSIGANPGE---DIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLV 153

Query: 178 EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           +E    A   F  K M+++G+  +  T   L++ L  TNRI       + +   G  PN+
Sbjct: 154 KEDIDMAR-EFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNT 212

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
             +  ++  L  N +V  + S++ EM D     E++F   +I    +E  L +A+ L + 
Sbjct: 213 VIYNTLLHALCRNGKVGRARSLMNEMVDPN---EVTF-NILISSYYKEENLVQALVLLEK 268

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
             AL L+PD +T  +++  LC   R+ +A ++LE +  +G +     +  +++G C VGK
Sbjct: 269 CFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGK 328

Query: 358 FDESVNFLE--DKCGYVTS-------------------------------------PHNA 378
               ++FL+  +  GY+ +                                       + 
Sbjct: 329 VKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDT 388

Query: 379 LLECCCNAGKFFLAKCILEKMADRK---IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           ++   C+ G+      ILE M + K         +N  I  L +     +A E L +M  
Sbjct: 389 MIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKM-- 446

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P     S  ++ KCK    EDA  ++ ++  +  +   + Y+ LV G  Q   I E
Sbjct: 447 GKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIRE 506

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           AVE+   M  N C   +S+FN +I   C   K++ A++      + G    T TY+ ++ 
Sbjct: 507 AVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLID 566

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALD 581
            L +    +  L V  +M+ +G   D
Sbjct: 567 VLCRKGDIQKALQVFLEMVEKGILPD 592



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/533 (21%), Positives = 216/533 (40%), Gaps = 46/533 (8%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR-TFEIVIKGLIANSRVDDSVSILGE 262
           T ++L +++ +      AL  FR         +S+ T+  +I  L    R D    +L E
Sbjct: 37  TQDHLCQLILDQKTSSEALQTFRWASTFSKFTHSQSTYRTLIHKLCIFRRFDTVKQLLDE 96

Query: 263 M-FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           M   +G       +  I+  L R       I +  +       P    +  +++ L +  
Sbjct: 97  MPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLVKE- 155

Query: 322 RLDDANDIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
            +D A +   + M+  G+   D  F  +++GLC   +  E    L+       +P    +
Sbjct: 156 DIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIY 215

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           N LL   C  GK   A+ ++ +M D       ++NI I    + E + +A  LL +    
Sbjct: 216 NTLLHALCRNGKVGRARSLMNEMVDPNEV---TFNILISSYYKEENLVQALVLLEKCFAL 272

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
           S+VPD  T +  V   C      +A  V  +V +    LD+++Y+ L++G C V K+   
Sbjct: 273 SLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVG 332

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           +     M   G   +  ++NILIYG C  R +D A+ L +   + G +    T+  ++ G
Sbjct: 333 LHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRG 392

Query: 557 LVKLQRAKDLLVVLAQM--LVEGCALDVEAYCILIQSMSEQNKLKDCALF---------- 604
           L    R +D   +L  M    EG    +  Y  +I  + +QN+  + + F          
Sbjct: 393 LCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPR 452

Query: 605 -----------------------FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
                                  ++ M+  G +P      SL+HG +    +      IN
Sbjct: 453 AVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELIN 512

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +++S++    +S +N +I    ++G    A   ++ +  +G VP+  T+  L+
Sbjct: 513 EMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLI 565


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 209/493 (42%), Gaps = 37/493 (7%)

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           Q+MV   Y         L+  F N  ++  A++V+  +   G K  V  +N V+    + 
Sbjct: 101 QHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKA 159

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
            R   D    V   M K G  P+V T N L+       R++ AL    ++ K  C P   
Sbjct: 160 DR--VDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVI 217

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ I+I+  I    +D+++ +L EM   G++ +   Y  ++  +C+E  L+ A      +
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
                +    TY  L+  L    + +    ++ DM+V G  P    +  ++  LC  GK 
Sbjct: 278 SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKI 337

Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWL 417
           DE                               AK +L+ M ++ +A D  S++  I  L
Sbjct: 338 DE-------------------------------AKNVLKVMKEKALAPDGYSYDPLISAL 366

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C   ++  A E L  M+    +PD  +Y++ +   CK  N ++AL +F ++       ++
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR-S 536
            SY+ L   L        A+ +   M  NG      ++N LI  LC    VD+AI L   
Sbjct: 427 GSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVD 486

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           +  S     T  +Y  ++LGL K+QR  D + VLA M+ EGC  +   Y +LIQ +    
Sbjct: 487 MFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546

Query: 597 KLKDCALFFNVMV 609
              D     N++V
Sbjct: 547 WRYDAMELANLLV 559



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 226/494 (45%), Gaps = 51/494 (10%)

Query: 43  KSHQTTDYEAKIQSLRH----NLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQ 93
           +S ++  Y+  +  L+H       PD      LI+   N   +  A+++ +   ++K  +
Sbjct: 86  RSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI--LEKHGK 143

Query: 94  HTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMR 152
                Y  +I     A  V+    +   M K  + P+V    I L+ +F    R++ A+R
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNI-LIGNFCGRGRLDLALR 202

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           V+  +     K +V  + +++ A + +  G  + + +  EM+  G+ P+  T N ++  +
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQG-GIDEAMKLLDEMLSRGLRPDRYTYNVVVNGM 261

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +   ++ A +   R+ K GC     T+ I+++ L+   + +    ++ +M   G +   
Sbjct: 262 CKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNP 321

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             Y+ +I  LCR+ K++EA  + K+M+   L PD  +Y+ LI+ LC   ++D A + L+D
Sbjct: 322 ITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDD 381

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           MI  G  P    +  I+  LC+ G  DE++N  E K G V  P NA              
Sbjct: 382 MISGGHLPDILSYNSILASLCKNGNADEALNIFE-KLGEVGCPPNA-------------- 426

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
                           S+N     L  + +  +A  ++  M+ + + PD  TY++ +   
Sbjct: 427 ---------------GSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCL 471

Query: 453 CKLCNYEDALRV----FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           C+    + A+ +    F     Q  V   ISY+ ++ GLC+V++I +A+EV   M   GC
Sbjct: 472 CRDGLVDQAIELLVDMFESEKCQPTV---ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGC 528

Query: 509 SLSSSSFNILIYGL 522
             + +++ +LI G+
Sbjct: 529 LPNETTYTLLIQGI 542



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 207/456 (45%), Gaps = 17/456 (3%)

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           +++ D+S+  L  M + G + ++   T +I       K+E+AI++ +++      PD   
Sbjct: 90  SAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFA 148

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFL 365
           Y  +I+  C+  R+D A+ +L+ M   G  P    +  ++   C  G+ D ++      L
Sbjct: 149 YNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLL 208

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
           +D C      +  L+E     G    A  +L++M  R +  D  ++N+ +  +C+   + 
Sbjct: 209 KDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLD 268

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A+E L R+  +  V   +TY+  +        +E   ++   +  +    + I+YS L+
Sbjct: 269 RAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLI 328

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
             LC+  KI EA  V   M +   +    S++ LI  LC   KVD AI       S G  
Sbjct: 329 TALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHL 388

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM-SEQNKLKDCAL 603
               +Y  I+  L K   A + L +  ++   GC  +  +Y  L  ++ S  +K++   +
Sbjct: 389 PDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGM 448

Query: 604 FFNVMVKAGLVPDRETMLSLLHGL-ADGSQLHLVSSGINKLVS--DSEVLDSSM--YNIL 658
               M+  G+ PD  T  SL+  L  DG    LV   I  LV   +SE    ++  YN +
Sbjct: 449 ILE-MLSNGIDPDEITYNSLISCLCRDG----LVDQAIELLVDMFESEKCQPTVISYNTV 503

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + GL K      A  +L  M+ +G +P+ TT+ LL+
Sbjct: 504 LLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLI 539



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 160/367 (43%), Gaps = 6/367 (1%)

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILE 397
           D  F+  +   C+  K+DES+ FL+        P       L++   N  K   A  ++E
Sbjct: 77  DTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME 136

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
            +      D  ++N  I   C+ + +  A ++L RM      PD  TY+  +   C    
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + ALRV  Q+   +     I+Y+ L+E       I EA+++   M   G      ++N+
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           ++ G+C    +D+A    S    +G     STY  ++  L+   + +    +++ MLV+G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           C  +   Y  LI ++    K+ +      VM +  L PD  +   L+  L    ++ L  
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS- 696
             ++ ++S   + D   YN ++  L K G   +A  + + +   G  P+A ++  L G+ 
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436

Query: 697 -SVGEEI 702
            S G++I
Sbjct: 437 WSSGDKI 443



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 178/395 (45%), Gaps = 10/395 (2%)

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           +  + + +N  C++ + D++   L+ M+  G  P   +   +++G   + K ++++  +E
Sbjct: 77  DTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME 136

Query: 367 --DKCGYV-TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
             +K G      +NA++   C A +   A  +L++M  R    D  ++NI I   C    
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A  ++ +++  +  P   TY+  +         ++A+++  ++ ++ L  D  +Y+ 
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +V G+C+   +  A E    +SKNGC    S++NIL+  L    K +   +L S     G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 543 TSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                 TY+ ++  L    K+  AK++L V+ +   +  A D  +Y  LI ++  + K+ 
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKE---KALAPDGYSYDPLISALCREGKVD 373

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
               F + M+  G +PD  +  S+L  L          +   KL       ++  YN L 
Sbjct: 374 LAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLF 433

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             LW  G   +A  ++  ML  G  PD  T+  L+
Sbjct: 434 GALWSSGDKIRALGMILEMLSNGIDPDEITYNSLI 468



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 1/187 (0%)

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C   K D+++       + G        TK++ G   +++ +  + V+ ++L +    DV
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDV 146

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
            AY  +I    + +++   +   + M K G  PD  T   L+       +L L    +++
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
           L+ D+       Y ILI     +G   +A  LLD ML +G  PD  T+ ++V     E +
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 703 DSRRFAF 709
             R F F
Sbjct: 267 LDRAFEF 273


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 194/412 (47%), Gaps = 12/412 (2%)

Query: 260 LGEMFDL-------GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           L EM DL       GI      +        +   +++A+ +F  MR   L PD ++Y  
Sbjct: 11  LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGA 70

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ LC+  R+DDA      MI  G+TP   VF  +V GLC + K+++      +     
Sbjct: 71  LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVG 130

Query: 373 TSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P+    N +L   C  G+    + +++ +    +  D  S+N  I   C    I +A 
Sbjct: 131 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 190

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +LL  MV   + P+  +Y+  + G CK    + A  +FR++ +  +    ++Y+ ++ GL
Sbjct: 191 KLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGL 250

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
            Q ++ +EA E++  M  +G      ++N ++ GLC    VD+A ++     S G     
Sbjct: 251 FQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 310

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            T+T ++  L+K  R +D + + A +   G   DV  Y ++ +++ E+  L++    F+ 
Sbjct: 311 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSA 370

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           M K G  P+ + + +L+  L     +    + ++KL   +  +++S  ++LI
Sbjct: 371 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 422



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 180/388 (46%), Gaps = 9/388 (2%)

Query: 151 MRVLVN-MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYL 208
           M  L+N M + G   +  +FN+   A    K G  D    ++ +M + G+ P+  +   L
Sbjct: 14  MHDLLNLMVANGISPNHHIFNIFFSAYA--KCGMIDKAMDIFNKMRQHGLSPDAVSYGAL 71

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L +  R++ A  +F +M  +G  PN   F  ++ GL +  + +    +  EM ++GI
Sbjct: 72  IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGI 131

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
              + F+  I+  LC+E ++ E  RL   +  + + PD ++Y  LI+  C    +D+A+ 
Sbjct: 132 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 191

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           +LE M+ +GL P    +  ++ G C+ G+ D + +          +P    +N +L    
Sbjct: 192 LLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLF 251

Query: 385 NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
              +F  AK +   M +        ++N  +  LC++  + +A+++   +    +  +  
Sbjct: 252 QTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 311

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           T++  +    K    EDA+ +F  + A  LV D ++Y  + E L +   + E   +F  M
Sbjct: 312 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAM 371

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            KNG + +S   N L+  L     + +A
Sbjct: 372 EKNGTAPNSQMLNALVRRLLHRGDISRA 399



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 3/220 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTL 205
           ++ A ++L  M S G K +   +N +L      K G  D  + ++++M+  GI P V T 
Sbjct: 186 IDEASKLLEGMVSVGLKPNSFSYNTLLHGYC--KAGRIDSAYSLFRKMLSNGITPGVVTY 243

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N +L  LF+T R   A + +  M   G      T+  ++ GL  ++ VD++  +   +  
Sbjct: 244 NTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCS 303

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G+QL +  +T +I  L +  + E+A+ LF  + A  L+PD +TY  +   L E   L++
Sbjct: 304 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEE 363

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
            + +   M   G  P   +   +VR L   G    +  +L
Sbjct: 364 FDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL 403



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 1/156 (0%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A ++  ++ S G +L++  F +++GA+++  R   D + ++  +   G+VP+V T  
Sbjct: 291 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK-EDAMDLFAAIPANGLVPDVVTYR 349

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            + E L E   +E     F  M K G  PNS+    +++ L+    +  + + L ++ + 
Sbjct: 350 VVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 409

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
              +E S  + +I +   +     A  L K  R L+
Sbjct: 410 NFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 445


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/552 (20%), Positives = 236/552 (42%), Gaps = 43/552 (7%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDV--FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVD 203
           R   AM +L  M +    ++ DV  +N  + A     R + + + + ++MV  G+ PN+ 
Sbjct: 160 RWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGR-WKEAMDLLEQMVAQGVPPNLI 218

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N  +    +  R E A+D    + ++G  P++RT+  VI       R  +++ +LG+M
Sbjct: 219 TYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQM 278

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
               I  ++  Y+ +I    R  + +EA+ L + MR   + P+ ++Y   I+   +  R 
Sbjct: 279 LTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRW 338

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
            +A D+L +M  +GL PT   +          G++ E++  L++      +P    +N+ 
Sbjct: 339 KEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSA 398

Query: 380 LECCCNAGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           L+ C   G++  A  +L  M+      D  S+N  I      ++   A ELL  M  + +
Sbjct: 399 LDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGL 458

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P+  TY++ +    +   +++A+ +FR++  + L  + ++Y+ +++   + E+   AV+
Sbjct: 459 TPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQ 518

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M   G +    S+N  I       + + A++L                        
Sbjct: 519 LLTGMPARGVAPDVISYNSAIEACGKGEQWELALQL------------------------ 554

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
                      L  M   G   D+ +Y   + + ++  + ++       M   GL P+  
Sbjct: 555 -----------LKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTV 603

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           +  + +H    G Q  +    + ++ +     +   Y+  I+   K+G   +A  LL  +
Sbjct: 604 SYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDL 663

Query: 679 LGKGWVPDATTH 690
             +G  PDA T+
Sbjct: 664 RRQGLTPDAQTY 675



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 106/514 (20%), Positives = 224/514 (43%), Gaps = 12/514 (2%)

Query: 201 NVDTLNYLLEVLFETN--RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           ++DT +Y + +   +N  +  +A+   R M  +G  P+  T+   I       R  +++ 
Sbjct: 107 SLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMD 166

Query: 259 ILGEMFDL--GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +L +M     GI  ++  Y   I       + +EA+ L + M A  + P+ +TY   I  
Sbjct: 167 LLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGA 226

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-----EDKCGY 371
             +  R ++A D+LE++I  G  P+   +  ++    + G++ E+++ L      D    
Sbjct: 227 CAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPAD 286

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELL 430
           V S +++++  C    ++  A  +LE+M  + ++ +  S+N  I    + +  ++A +LL
Sbjct: 287 VIS-YSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLL 345

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M    +VP   +Y++          + +AL + +++ AQ +  ++ISY+  ++   + 
Sbjct: 346 REMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKG 405

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +  +AV++   MS  G      SFN  I      ++ + A+ L     ++G +    TY
Sbjct: 406 GQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITY 465

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
              +    +  R ++ + +  +M   G + +V  Y  +I + ++  + +        M  
Sbjct: 466 NSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPA 525

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
            G+ PD  +  S +     G Q  L    +  + +     D   YN  +    K G   +
Sbjct: 526 RGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWRE 585

Query: 671 ASYLLDLMLGKGWVPDATTHGLLVGS-SVGEEID 703
           A  LL  M   G  P+  ++G  + +   GE+ D
Sbjct: 586 ALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWD 619



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/499 (20%), Positives = 207/499 (41%), Gaps = 6/499 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY   I      G  +E   L + MV +  P       S + +     R   AM +L  +
Sbjct: 184 TYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEV 243

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              GF  S   +N V+ A  +  R + + + +  +M+   I  +V + + ++       R
Sbjct: 244 IEQGFPPSTRTYNPVIDACAKGGR-WLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRR 302

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            + A+D   +M  +G  PN  ++   I       R  +++ +L EM  +G+   +  Y  
Sbjct: 303 WKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNS 362

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
                    +  EA+ L K M A  + P+ ++Y   ++   +  + + A  +L  M  +G
Sbjct: 363 ATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVG 422

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             P    F   +       +++ +V  L +      +P    +N+ +E C  + ++  A 
Sbjct: 423 SDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAM 482

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +  +M  R ++ +  ++N  I    + E+   A +LL  M    V PD  +Y++ +   
Sbjct: 483 GLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEAC 542

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            K   +E AL++ + +  +    D ISY+  V    +  +  EA+ +   M+  G + ++
Sbjct: 543 GKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNT 602

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            S+   I+      + D A+R+     + G +    TY+  +    K  R K+ + +L  
Sbjct: 603 VSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTD 662

Query: 573 MLVEGCALDVEAYCILIQS 591
           +  +G   D + Y  +I +
Sbjct: 663 LRRQGLTPDAQTYLTVISA 681



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/477 (20%), Positives = 189/477 (39%), Gaps = 50/477 (10%)

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +++ L E    G  L+ + Y   I       +   A+RL + M    + PD +TY   I 
Sbjct: 94  ALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIA 153

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR------------------------- 350
              +  R  +A D+L  M+     PT+ +  D+V                          
Sbjct: 154 ACSKGGRWKEAMDLLTQMVA----PTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMV 209

Query: 351 ---------------GLCEVG-KFDESVNFLED--KCGYV--TSPHNALLECCCNAGKFF 390
                          G C  G +++E+++ LE+  + G+   T  +N +++ C   G++ 
Sbjct: 210 AQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWL 269

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  +L +M    I AD  S++  I         ++A +LL +M    V P+  +Y++ +
Sbjct: 270 EAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAI 329

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
               K   +++AL + R+++   LV   ISY+          +  EA+E+   M   G +
Sbjct: 330 DACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIA 389

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            ++ S+N  +       + +KA++L     + G+     ++   +    + Q+ +  + +
Sbjct: 390 PNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVEL 449

Query: 570 LAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           L +M   G   +V  Y   I++     + ++    F  M   GL P+  T  S++   A 
Sbjct: 450 LREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAK 509

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           G Q  L    +  + +     D   YN  I    K      A  LL  M  +G  PD
Sbjct: 510 GEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPD 566


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 177/369 (47%), Gaps = 6/369 (1%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           +FN +L ++V+ KR +   + ++K+    GI P++ TL+ L+        I  A   F  
Sbjct: 63  LFNNILSSLVKNKR-YPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFAN 121

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           + K+G  PN+ T   +IKGL     +  ++    ++   G QL+   Y  +I  LC+  +
Sbjct: 122 ILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGE 181

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            +   RL + +    + PD + Y  +I+CLC+N  L DA D+  +MIV G++P    +  
Sbjct: 182 TKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTT 241

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ G C +G   E+ + L +      +P     N L++     GK   A  + E+M  + 
Sbjct: 242 LIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKN 301

Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           +  +  ++   I  LC+N  + +A  L  +M    + P+  +Y+  +   CK    E+A 
Sbjct: 302 MFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAK 361

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           + F+ +  +   L+  +Y+ ++ GLC+     + +++   M   GC  ++ +F  +I  L
Sbjct: 362 QFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICAL 421

Query: 523 CVMRKVDKA 531
               + DKA
Sbjct: 422 LEKDENDKA 430



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 166/388 (42%), Gaps = 15/388 (3%)

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           D+V+    M  +        +  I+  L +  +    I LFK      + PD  T   LI
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-------- 366
           NC C    +  A  +  +++  G  P       +++GLC  G+   +++F +        
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 367 -DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
            D+  Y T     L+   C AG+      +L K+    +  D   +   I  LC+N+ + 
Sbjct: 164 LDQVSYGT-----LINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLG 218

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A +L   M+V  + P+  TY+  + G C + N ++A  +  ++  +++  D  +++ L+
Sbjct: 219 DACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 278

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           + L +  KI EA+ +F  M       +  ++  LI GLC    +++AI L       G  
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               +YT ++  L K  R ++       +LV+G  L+V  Y ++I  + +     D    
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            + M   G +P+  T  +++  L +  +
Sbjct: 399 KSKMEGKGCMPNAITFKTIICALLEKDE 426



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 157/370 (42%), Gaps = 5/370 (1%)

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALL 380
           DA      M+++   P   +F +I+  L +  ++   ++  +       +P     + L+
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
            C C+      A  +   +  R    +  + N  I+ LC   EI++A     ++V     
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
            D  +Y   + G CK    +   R+ R++   S+  D + Y+ ++  LC+ + + +A ++
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           +  M   G S +  ++  LI+G C+M  + +A  L +       +    T+  ++  L K
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             +  + + +  +M  +    ++  Y  LI  + + + L+        M + G+ P+  +
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYS 343

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              LL  L  G +L         L+     L+   YN++INGL K GL      L   M 
Sbjct: 344 YTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKME 403

Query: 680 GKGWVPDATT 689
           GKG +P+A T
Sbjct: 404 GKGCMPNAIT 413



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/399 (19%), Positives = 170/399 (42%), Gaps = 5/399 (1%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A+  F RM      P +  F  ++  L+ N R    +S+  +    GI  +L   + +I 
Sbjct: 45  AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C    +  A  +F  +      P+ +T   LI  LC    +  A    + ++  G   
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  ++ GLC+ G+       L    G+   P    +  ++ C C       A  + 
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  + I+ +  ++   I   C    +++A+ LL  M + ++ PD  T++  +    K 
Sbjct: 225 SEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKE 284

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A+ +F ++  +++  + ++Y+ L++GLC+   +  A+ +   M + G   +  S+
Sbjct: 285 GKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSY 344

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            IL+  LC   +++ A +        G      TY  ++ GL K     D++ + ++M  
Sbjct: 345 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 404

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
           +GC  +   +  +I ++ E+++      F   M+  GL+
Sbjct: 405 KGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 113/265 (42%)

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
             RM++    P    ++  +    K   Y   + +F+Q     +  D  + S L+   C 
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           +  IT A  VF  + K G   ++ + N LI GLC   ++ +A+       + G      +
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ GL K    K +  +L ++       D+  Y  +I  + +   L D    ++ M+
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMI 228

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G+ P+  T  +L+HG      L    S +N++   +   D   +NILI+ L KEG   
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           +A  L + M  K   P+  T+  L+
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLI 313



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 85/176 (48%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           EM    I P+V T N L++ L +  +I+ A+  F  M  K   PN  T+  +I GL  N 
Sbjct: 261 EMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNH 320

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            ++ ++++  +M + GIQ  +  YT ++  LC+  +LE A + F+ +       +  TY 
Sbjct: 321 HLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYN 380

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            +IN LC+     D  D+   M   G  P    F  I+  L E  + D++  FL +
Sbjct: 381 VMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLRE 436



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 21/242 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D Y +MI+K G++ NV     L          N++EA     FS +N  +       L N
Sbjct: 222 DLYSEMIVK-GISPNVFTYTTLIHGFCIMG--NLKEA-----FSLLNEMK-------LKN 266

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           +N       V  FN+++ A+ +E +   + + +++EM    + PN+ T   L++ L + +
Sbjct: 267 INP-----DVYTFNILIDALAKEGK-IDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNH 320

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            +E A+   ++M ++G  PN  ++ I++  L    R++++      +   G  L +  Y 
Sbjct: 321 HLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYN 380

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC+     + + L   M     MP+ +T++ +I  L E    D A   L +MI  
Sbjct: 381 VMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIAR 440

Query: 337 GL 338
           GL
Sbjct: 441 GL 442


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 206/467 (44%), Gaps = 34/467 (7%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV +FV + ++             GFKLS+   N +L  +V+E     D  FVY+EM+K 
Sbjct: 91  LVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESEN-GDMEFVYREMIKR 149

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD- 255
            I  NV + N ++  L +  ++  A D    M   G  PN  T+  +I G     R+   
Sbjct: 150 KIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKM 209

Query: 256 --SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
             + +IL EM   GI      Y  +I   C++  +  A+R+F  M+   L P+ +TY  L
Sbjct: 210 YKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNIL 269

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
           IN LC + ++D+A  + + M+   L P       ++ G C+    +E++N   D      
Sbjct: 270 INGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRM 433
            P NA+                             ++   I   C++  +  A+ L   M
Sbjct: 330 DP-NAM-----------------------------TYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
           +   + P+ +TY+  + G C+  + + A  +  ++ ++ L  D ++Y+ L++ LC+  + 
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            +AV++   M + G + S  ++N L+ G C    +  A+ +R+     G      T+  +
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
           + G     R +D   +L +ML  G   +   Y I+ + M E+  + D
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 4/304 (1%)

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +  +M  RKI  +  S+NI +  LC+  ++ +A +++  M V  V P+  TY+  + G C
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 454 KLCNYEDALR---VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           K+       +   + +++ A+ +  + ++Y+ L++G C+ E ++ A+ VF  M + G   
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++NILI GLC   KVD+A+ LR    SS       T+  ++ G  K +   + + + 
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             M  +G   +   Y  LI +  +  +++D    +N+M+  G+ P+  T   L+ GL   
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             +    S +N++VS     D   YNILI+ L K+G + +A  LLD M  KG  P   T+
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 691 GLLV 694
             L+
Sbjct: 442 NTLM 445



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 179/374 (47%), Gaps = 13/374 (3%)

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG---KFFLAKCILE 397
           F  +V GLC+VGK + + + +ED   +  SP    +N L++  C  G   K + A  IL+
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217

Query: 398 KMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M  + I   + ++NI I   C++E +  A  + G M    + P+  TY+  + G C   
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ++A+ +  Q+ +  L  + ++++ L+ G C+ + + EA+ +F  M K G   ++ ++ 
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            LI   C   +++ A  L ++    G     STY  ++ GL +    K    ++ +M+ +
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
             + DV  Y ILI S+ ++ + +      + M + GL P   T  +L+ G      L   
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA 457

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
                ++    +  +   +N+LI G   +G    A+ LL+ ML +G VP+ TT+ +    
Sbjct: 458 LIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI---- 513

Query: 697 SVGEEIDSRRFAFD 710
            + EE+  + F  D
Sbjct: 514 -IKEEMMEKGFVPD 526



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 143/358 (39%), Gaps = 77/358 (21%)

Query: 70  LDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-P 128
           L+   D+   +K++        +    D YCKM    G  G + + + + + MV +   P
Sbjct: 171 LNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM----GRIGKMYKADAILKEMVAKGICP 226

Query: 129 NVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF 188
           N     I L+  F     V+GAMRV   M   G + +V  +N+++  +  + +   + V 
Sbjct: 227 NEVTYNI-LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGK-VDEAVA 284

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           +  +MV + + PNV T N L+    +   +  A++ F  M K+G  PN+ T+  +I    
Sbjct: 285 LRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE------------------- 289
            + R++D+ ++   M D GI  E+S Y C+I  LCR+  ++                   
Sbjct: 345 KDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVV 404

Query: 290 ----------------EAIRLFKMMRALDLMPDELTYEELINCLCE--NLR--------- 322
                           +A++L   M    L P  +TY  L++  C   NLR         
Sbjct: 405 TYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRM 464

Query: 323 ------------------------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
                                   L+DAN +L +M+  GL P    +  I   + E G
Sbjct: 465 ERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 226/512 (44%), Gaps = 6/512 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++++MV+   +P+V + + LL+ +       S +  FR +HK     +     IV+    
Sbjct: 59  LFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCC 118

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-MMRALDLMPDE 307
              R D   S+L   F  GI      +T +I  L  ENK+++A+ LFK ++R     P+E
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNE 178

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  ++N LC+      A D+L  M      P    +  ++   C+ G  D + + L +
Sbjct: 179 VMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNE 238

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                  P    ++ L++  C   ++   + +  +M    I  +  ++N  I  LC+  +
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A E++  M+   V PD  TY+  + G       + A  +F  +  +S+  D ISY+ 
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ G  + +KI EA++V   +S+ G   S  + N+L++GL  + +   A        S+G
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 T+  ++ G  K    ++ +    ++       +++ Y  +I  + +  KL    
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  +   GL PD  T  +++ G      L      + K+  +  + D+  YN+++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +    S+    L+ + GK +  +A T  LL+
Sbjct: 539 LRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/484 (19%), Positives = 207/484 (42%), Gaps = 31/484 (6%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A   FR+M +    P+  +F  ++K ++        VS+  E+  L I +     + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++   C  ++ +    +  +     +  +E+T+  LI  L    ++ DA  + + ++   
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 338 L-TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           +  P + ++  ++ GLC+ G   ++ + L                             ++
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLR----------------------------LM 204

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           E+ + +   +  ++ I I   C++  +  A  LL  M   S+ PD  TYS  +   CKL 
Sbjct: 205 EQGSTK--PNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS 262

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
            +E+   +F ++   ++  +  +++ +++GLC+  K+ +A E+   M + G      ++N
Sbjct: 263 QWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           ++I G  +  +VD+A  +     +        +Y  ++ G  + ++  + + V  ++  +
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK 382

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G    +    +L+  + E  + K    FF+ M+ AG +PD  T  +LL G      +   
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            S  +KL    E  +  +Y  +I+GL K G   +A    + +   G  PD  T+  ++  
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 697 SVGE 700
              E
Sbjct: 503 YCQE 506



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 226/544 (41%), Gaps = 49/544 (9%)

Query: 70  LDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPN 129
             N   L  A  +F+ +   K     A ++ K++  +    +   +  L + + K R P 
Sbjct: 47  FQNVKCLDDAFSLFRQMVRTKPLPSVA-SFSKLLKAMVHMKHYSSVVSLFREIHKLRIP- 104

Query: 130 VREALISLVFSFVNH----YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           V E ++S+V   VN     +R +    VL      G   +   F  ++  +  E +   D
Sbjct: 105 VHEFILSIV---VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENK-VKD 160

Query: 186 FVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
            V ++K++V+  I  PN      ++  L +    + A D  R M +    PN+RT+ IVI
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVI 220

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                +  +D + S+L EM    I  ++  Y+ +I  LC+ ++ E    LF  M  L++ 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+  T+  +I+ LC+  +++DA +I+  MI  G+ P    +  I+ G    G+ D     
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDR---- 336

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
                                      A+ I + M ++ I  D  S+NI I      ++I
Sbjct: 337 ---------------------------AREIFDSMINKSIEPDIISYNILINGYARQKKI 369

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A ++   +    + P   T +  + G  +L   + A   F ++ +   + D  ++  L
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTL 429

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + G  +   + EA+  F  + +     +   +  +I GLC   K+DKA          G 
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGL 489

Query: 544 SYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
                TYT ++ G  +   L  AKD+   L +M   GC  D   Y ++++     NK+ +
Sbjct: 490 HPDVITYTAMISGYCQEGLLDEAKDM---LRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546

Query: 601 CALF 604
              F
Sbjct: 547 MKAF 550



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 1/236 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +V+ A  +  +M +   +  +  +N+++     +K+   + + V +E+ + G+ P++ T 
Sbjct: 333 QVDRAREIFDSMINKSIEPDIISYNILINGYARQKK-IDEAMQVCREISQKGLKPSIVTC 391

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N LL  LFE  R +SA + F  M   G  P+  T   ++ G   N  V++++S   ++  
Sbjct: 392 NVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
                 +  YT +I  LC+  KL++A   F+ +  + L PD +TY  +I+  C+   LD+
Sbjct: 452 RREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
           A D+L  M   G    +  +  IVRG     K  E   FLE+  G   S   A +E
Sbjct: 512 AKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVE 567



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/439 (20%), Positives = 194/439 (44%), Gaps = 8/439 (1%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK- 124
           LIR L   N +  A+ +FK +  +   +     Y  ++  L   G+ ++   L + M + 
Sbjct: 148 LIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG 207

Query: 125 ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
              PN R   I ++ +F     ++GA  +L  M        +  ++ ++ A+ +  + + 
Sbjct: 208 STKPNTRTYTI-VIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ-WE 265

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           +   ++ EM+   I PNV T N +++ L +  ++E A +  R M +KG  P+  T+ ++I
Sbjct: 266 NVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMII 325

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
            G     +VD +  I   M +  I+ ++  Y  +I    R+ K++EA+++ + +    L 
Sbjct: 326 DGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLK 385

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P  +T   L++ L E  R   A +  ++M+  G  P       ++ G  + G  +E+++ 
Sbjct: 386 PSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSH 445

Query: 365 LED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
                  +       + A+++  C  GK   A    EK+    +  D  ++   I   C+
Sbjct: 446 FHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ 505

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              + +A ++L +M  +  + D  TY+  V G  +     +      +++ +S   ++ +
Sbjct: 506 EGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAAT 565

Query: 480 YSKLVEGLCQVEKITEAVE 498
              L++ + +   IT  + 
Sbjct: 566 VELLMDIIAEDPSITRKMH 584


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 151/658 (22%), Positives = 280/658 (42%), Gaps = 26/658 (3%)

Query: 36  SSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVL-DNTNDLSSALKIFKWVSIQKRFQH 94
           +S   +I+  Q  D +  ++ +  +L P  + RVL +   D   ALK F+W   +  F  
Sbjct: 69  ASIIKIIQQDQWNDPKF-VRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGFCL 127

Query: 95  TADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVL 154
           T ++YC ++  L  A    +     + ++  R           +    + + V  + R +
Sbjct: 128 TTESYCLLVHILFYARMYFDANFFLKELISSRR----------ILPGFDVFEVLWSTRNV 177

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
                G F     VF + LG + E  + F+        M +  + P   + N  L  L +
Sbjct: 178 CVPGFGVFDALFSVF-IELGMLEEAGQCFS-------RMTRFRVFPKARSCNAFLYRLAK 229

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           T + + +   FR M   G   +  T+ I+I  +     +  + S+  +M  +G+  ++  
Sbjct: 230 TGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVT 289

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I    +   L+E+  LF+ M+ +   PD +TY  LINC C+  ++  A   L +M 
Sbjct: 290 YNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMK 349

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             GL P    +  ++  LC+     +++ FL D      SP    + +L++  C AG   
Sbjct: 350 NSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLS 409

Query: 391 LAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A  + ++M   ++  +  ++   +  LC+   + +A +L   M+ + V P+  TY+A V
Sbjct: 410 DALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALV 469

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G  K    E+AL + +++  + +  D + Y  ++ GLC   K+ E   V   M   G  
Sbjct: 470 HGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR 529

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            +S  + I +       K  +A+ L       G   T  T+  ++ GL K    ++ +  
Sbjct: 530 ANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDY 589

Query: 570 LAQMLVEGCALDVEAYCI-LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            A+M       +  A C  LI  + + N ++     F+ M    +VPD+    +L+ G  
Sbjct: 590 FARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNL 649

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                    +  +++      LD   Y  L+ GL +  L  QA   L+ M+GKG VPD
Sbjct: 650 KHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/504 (20%), Positives = 207/504 (41%), Gaps = 14/504 (2%)

Query: 206 NYLLEVLFETNRIESALDQFRRMH--KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N+ L+ L  + RI    D F  +   +  C P    F+ +    I    ++++      M
Sbjct: 149 NFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRM 208

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
               +  +       +  L +  K + + + F+ M    +     TY  +I  +C+   +
Sbjct: 209 TRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNAL 379
             A  +   M  +GLTP    +  ++ G  ++G  DES    E+       P    +NAL
Sbjct: 269 VTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNAL 328

Query: 380 LECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           + C C   +   A   L +M +  +  +  +++  I  LC+   +++A + L  M    +
Sbjct: 329 INCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGL 388

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P+  TY++ +   CK     DAL++  ++    +  + ++Y+ L++GLC+  ++ EA +
Sbjct: 389 SPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAED 448

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +F  M K G + +  ++  L++G    ++V+ A+ L               Y  I+ GL 
Sbjct: 449 LFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLC 508

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
              + ++   V+++M   G   +   Y I + +  +  K  +       M   G+     
Sbjct: 509 SQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIV 568

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVS----DSEVLDSSMYNILINGLWKEGLTSQASYL 674
           T   L+ GL       LV   I+        + +  + ++   LI+GL K      A  L
Sbjct: 569 TFCVLIDGLCKKG---LVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKL 625

Query: 675 LDLMLGKGWVPDATTHGLLVGSSV 698
            D M  K  VPD   +  L+  ++
Sbjct: 626 FDEMQDKNMVPDKIAYTALIDGNL 649


>gi|22325737|ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g17525, mitochondrial; Flags: Precursor
 gi|330251547|gb|AEC06641.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 626

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 263/590 (44%), Gaps = 25/590 (4%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           S DH++R++ +    S AL+ F+W S    F H+  TY  +  KL +    + +  L   
Sbjct: 42  SDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDE 101

Query: 122 MVKE-RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           M      P      ++++  F     +   + V+  ++  G K S+ VFN +L  +V+E 
Sbjct: 102 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 161

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
              A   F  ++M+ +GI  +V T   L++ L  TNRI       + M   G  PN+  +
Sbjct: 162 IDIAREFFT-RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVY 220

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L  N +V  + S++ EM +     +++F   +I   C E KL +++ L +   +
Sbjct: 221 NTLLHALCKNGKVGRARSLMSEMKEPN---DVTF-NILISAYCNEQKLIQSMVLLEKCFS 276

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD-IVRGLCEVGKFD 359
           L  +PD +T  +++  LC   R+ +A ++LE +   G    D V  + +V+G C +GK  
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG-GKVDVVACNTLVKGYCALGKMR 335

Query: 360 ESVNFL--EDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP-- 413
            +  F    ++ GY+ +   +N L+   C+ G   +    L+   D K  D   WN    
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVG---MLDSALDTFNDMK-TDAIRWNFATF 391

Query: 414 ---IRWLCENEEIRKAYELLGRMVVSSVVPDCA--TYSAFVLGKCKLCNYEDALRVFRQV 468
              IR L          ++L  M  S  V       Y+  + G  K   +EDAL     +
Sbjct: 392 NTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL--L 449

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + L   ++  S  +  LC+   + +    +  M   G   S    + LI+      K+
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++++ L +   + G    +ST+  +++G  K  +  + +  +  M   GC  D E+Y  L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
           ++ +  +  ++   L F+ MV+  +VPD     SL+  L+  + +H+ SS
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSS 619



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/498 (22%), Positives = 200/498 (40%), Gaps = 46/498 (9%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+   F  +I+G      +   +S++  +   GI+  L  +  I+ +L +E+ ++ A
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-IDIA 165

Query: 292 IRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
              F + M A  +  D  TY  L+  L    R+ D   +L+ M   G+ P   V+  ++ 
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK-MADRKIADCDS 409
            LC+ GK   + + + +         N L+   CN  K   +  +LEK  +   + D  +
Sbjct: 226 ALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
               +  LC    + +A E+L R+       D    +  V G C L     A R F ++ 
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            +  + +  +Y+ L+ G C V  +  A++ F  M  +    + ++FN LI GL +  + D
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405

Query: 530 KAIRLRSLAYSSGTSYTT--STYTKIMLGLVKLQRAKDLLVVLA---------------- 571
             +++  +   S T +      Y  ++ G  K  R +D L  L                 
Sbjct: 406 DGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKL 465

Query: 572 -----------------QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
                            QM+ EG    +     LI   S+  K+++     N MV  G +
Sbjct: 466 ISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYL 525

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE----VLDSSMYNILINGLWKEGLTSQ 670
           P   T  +++ G     +   V +GI K V D      V D+  YN L+  L  +G   +
Sbjct: 526 PRSSTFNAVIIGFCKQDK---VMNGI-KFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581

Query: 671 ASYLLDLMLGKGWVPDAT 688
           A  L   M+ K  VPD +
Sbjct: 582 AWLLFSRMVEKSIVPDPS 599



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/504 (20%), Positives = 216/504 (42%), Gaps = 19/504 (3%)

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           V + ++++ ++ +      AL+ FR      G   +  T+  +   L    R D    +L
Sbjct: 40  VPSDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL 99

Query: 261 GEMFD-LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
            EM D +G+  + + +  II    R   ++  I +  ++    + P    +  +++ L +
Sbjct: 100 DEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK 159

Query: 320 NLRLDDANDIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
              +D A +     M+  G+      +  +++GL    +  +    L+       +P   
Sbjct: 160 E-DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAV 218

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
            +N LL   C  GK   A+ ++ +M   K  +  ++NI I   C  +++ ++  LL +  
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEM---KEPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
               VPD  T +  +   C      +AL V  +V ++   +D ++ + LV+G C + K+ 
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A   F  M + G   +  ++N+LI G C +  +D A+   +   +    +  +T+  ++
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395

Query: 555 LGLVKLQRAKDLLVVLAQM----LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
            GL    R  D L +L  M     V G  +D   Y  +I    ++N+ +D   F   M K
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK 453

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
             L P        L  L +   +  + +  ++++ +  V    + + LI+   + G   +
Sbjct: 454 --LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEE 511

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           +  L++ M+ +G++P ++T   ++
Sbjct: 512 SLELINDMVTRGYLPRSSTFNAVI 535



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 6/199 (3%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD-VFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +++ F    R   A+  L+ M    F  +VD  F ++    + EK G  D    Y +M+ 
Sbjct: 431 VIYGFYKENRWEDALEFLLKMEKL-FPRAVDRSFKLI---SLCEKGGMDDLKTAYDQMIG 486

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G VP++   + L+    +  +IE +L+    M  +G  P S TF  VI G     +V +
Sbjct: 487 EGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMN 546

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  + +M + G   +   Y  ++  LC +  +++A  LF  M    ++PD   +  L+ 
Sbjct: 547 GIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMF 606

Query: 316 CLCENLRLDDANDILEDMI 334
           CL +   +   N  L+D+I
Sbjct: 607 CLSQKTAI-HVNSSLQDII 624


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 191/412 (46%), Gaps = 42/412 (10%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           LV   SG +  +V ++N ++  +    R   D   V ++MV+  IVPNV T   LL  L 
Sbjct: 76  LVRELSGVYTPTVFIYNGIITGLCRASR-VMDAYKVLEKMVEESIVPNVFTYTILLNGLC 134

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
            +N+ + A + F+ M + GC PN  T                                  
Sbjct: 135 RSNKTKLAREVFQEMKRNGCKPNPIT---------------------------------- 160

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I  L R  +++EA+R+    R+L+L  D +T   ++  LC+  RLDDA   +E+M
Sbjct: 161 -YGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYV-TSPHNALLECCCNAGK 388
             +G+ P +  + ++V G  + G+ D  + F E+    K G +  + +   L+  C AG 
Sbjct: 220 RQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGY 279

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A+  +E++    +  D  ++++ I       +   + ELL  M  + V PD  TYS 
Sbjct: 280 LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYST 339

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   CK   ++DA R+   + A     + ++Y+ +++GLC+  K+ E   V+  M K+ 
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           CS    +++I++ GL     +D A++L  L  SS      + Y+ ++  L +
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCR 451



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 194/441 (43%), Gaps = 13/441 (2%)

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + G +++   +T +   L R +K  E +RLF ++ +  ++  E TY+ +++ LC     +
Sbjct: 12  EAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
            A +++ ++  +  TPT  ++  I+ GLC   +  ++   LE        P    +  LL
Sbjct: 72  QALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVS 436
              C + K  LA+ + ++M   K   C     ++   I+ L    EI +A  ++      
Sbjct: 131 NGLCRSNKTKLAREVFQEM---KRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            +  D  T +  V G CK    +DAL+   ++    +  + ++YS LV G  Q  ++   
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRV 247

Query: 497 VEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           +  F    ++ G SL ++++   +  LC    +D+A +       SG      TY+ ++ 
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              +  +    L +L  M   G   DV  Y  LI  + ++ K +D      +M  AG  P
Sbjct: 308 TFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  S++ GL    ++  V      ++      D   Y+I++NGL K G+   A  L 
Sbjct: 368 NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
           +L+      PDA  + +++ S
Sbjct: 428 ELIKSSREGPDAAAYSMVITS 448



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/483 (19%), Positives = 202/483 (41%), Gaps = 34/483 (7%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + +V+AG   +      L   LF  ++    +  F  +  +G      T+++V+ GL   
Sbjct: 8   RSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67

Query: 251 SRVDDSVSILGEMFDLGIQLELSF-YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
              + ++ ++ E+   G+     F Y  II  LCR +++ +A ++ + M    ++P+  T
Sbjct: 68  GMANQALELVRELS--GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  L+N LC + +   A ++ ++M   G  P    +  +++ L   G+ DE++       
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL------- 178

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
                                  + ++E+ +     D  +    +  LC+   +  A + 
Sbjct: 179 -----------------------RVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKF 215

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA-QSLVLDSISYSKLVEGLC 488
           +  M    V P+  TYS  V G  +    +  +R F +  A +   L++ +Y   ++ LC
Sbjct: 216 MEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALC 275

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +   +  A +    + ++G      ++++LI       + D ++ L      +G      
Sbjct: 276 KAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVV 335

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY+ ++  L K ++ +D   +L  M   G   +V  Y  ++  + +  K+ +    + +M
Sbjct: 336 TYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMM 395

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           +K+   PD  T   +++GL+    L         + S  E  D++ Y+++I  L + G  
Sbjct: 396 LKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKL 455

Query: 669 SQA 671
            +A
Sbjct: 456 EEA 458



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 5/179 (2%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M + G+ P+V T + L+ VL +  + + A      M   G  PN  T+  V+ GL  +
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++D+   +   M       ++  Y+ I+  L +   L+ A++LF+++++    PD   Y
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAY 442

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDV---FVDIVRGLCEVGKFDESVNFLE 366
             +I  LC   +L++A  +   M V      D++      +V  LC+  + D +   +E
Sbjct: 443 SMVITSLCRAGKLEEACGMYHGMEVT--VAGDNICRALAGLVAALCDAKRTDSARRIVE 499


>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
          Length = 751

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 132/557 (23%), Positives = 243/557 (43%), Gaps = 45/557 (8%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++  + + G+VP+V T N LL+ + ET   E  L  +  M      P+  TF IV + L 
Sbjct: 155 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 214

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +VD+++ +  EM ++G++ +   Y+  +  LC   K + A  + + +    +  + +
Sbjct: 215 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAYVILQEINREKVPVEAM 274

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  +++ LC+ +RLD+A  +LE+    G  P    +  +++  C++G   ++V+  E  
Sbjct: 275 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAM 334

Query: 369 C--GYVTSPH--NALLECCCNAG------KFFL----------------AKCILEKMADR 402
              G  T+ H  + LL+C    G       +FL                A+ + E+M   
Sbjct: 335 VSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKGEMQNAQQVFEEMLKA 394

Query: 403 KI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            I  D  ++NI     C++  + + ++LL RM    + P+  TY   ++G C+  N  +A
Sbjct: 395 NIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEA 454

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
             +F  V  + +    + YS +V G         A  +F  +++ G  +   S + LI  
Sbjct: 455 EVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLIND 514

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           LC +  V  A  +  +           +Y+K++    +        +    M+  G ++D
Sbjct: 515 LCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSID 574

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD------------RETMLSLLHGLAD 629
           V  Y IL+    +  +L++    F  M   G+ PD            +ET+     G+A 
Sbjct: 575 VIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAK 634

Query: 630 GSQLHLVSSGINKLVSDSEVL----DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
             +  L+ +  NKL+S  + +    D   Y +LI+G  K     +A  L D ML KG  P
Sbjct: 635 ERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTP 694

Query: 686 DATTHGLLVGS--SVGE 700
           DA  +  L+    S GE
Sbjct: 695 DAYAYTALINGYCSQGE 711



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 149/361 (41%), Gaps = 56/361 (15%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V++EM+KA I P++ T N L     ++  +    D   RM  +G  PNS T+ I I G  
Sbjct: 387 VFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFC 446

Query: 249 ANSRVDDSVSILGEMFDLGI-QLELSF--------------------------------Y 275
               + ++  +   + + GI  +E+ +                                +
Sbjct: 447 RGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHF 506

Query: 276 TC--IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           +C  +I  LCR   ++ A  + K+M   +++PD ++Y +LI+  C+N  +D A+    DM
Sbjct: 507 SCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 566

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL--------- 380
           +  GL+    V+  ++ G C+ G+  E+             P    +  LL         
Sbjct: 567 VQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQ 626

Query: 381 ---ECCCNAGKFFLAKC----ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGR 432
              E      + FL +     +L  M D +I  D   + + I   C+ E + +A EL   
Sbjct: 627 QGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDE 686

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M+   + PD   Y+A + G C       A  + +++  + +  D +++S L +   +  K
Sbjct: 687 MLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRK 746

Query: 493 I 493
           I
Sbjct: 747 I 747



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 97/507 (19%), Positives = 207/507 (40%), Gaps = 36/507 (7%)

Query: 229 HKKGCC-PNSRTFEI--VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           H++ C  P S +F +  +IK  I    V  ++ +   +  LG+   +  +  ++  +   
Sbjct: 122 HRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAET 181

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            + E  +  +  M+   L PD  T+  +   L +  ++D+A  +  +M  +G+ P    +
Sbjct: 182 GEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGY 241

Query: 346 VDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
              + GLC+  K+D +   L+    +K       +N +++  C   +   A+ +LE  A 
Sbjct: 242 SSFLIGLCDCRKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKAR 301

Query: 402 R-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL----- 455
           +    D   ++  I+  C+   + KA +    MV   +  +C   S  +    KL     
Sbjct: 302 QGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSE 361

Query: 456 -----------------CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
                               ++A +VF ++   ++  D ++Y+ L  G C+   + E  +
Sbjct: 362 VIAYFLKFKDSGLHLDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFD 421

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M+  G   +S ++ I I G C    + +A  L ++    G  +    Y+ ++ G +
Sbjct: 422 LLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYL 481

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD-- 616
                    ++  ++  +G  +D  +   LI  +     ++  +    +M++  +VPD  
Sbjct: 482 LSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVI 541

Query: 617 -RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
               ++S+     D  + HL     + +V     +D  +Y IL+NG  K G   +A  L 
Sbjct: 542 SYSKLISIYCQNGDMDKAHL---WFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLF 598

Query: 676 DLMLGKGWVPDATTHGLLVGSSVGEEI 702
             M   G  PD   + +L+   + E +
Sbjct: 599 VQMTNLGIKPDVIAYTVLLDGHLKETL 625



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 115/574 (20%), Positives = 223/574 (38%), Gaps = 78/574 (13%)

Query: 90  KRFQHTADTYCKMILKLGL--AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           K FQ T D Y   I+   L  A  V+E   +   M +           S +    +  + 
Sbjct: 195 KCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCRKY 254

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
           + A  +L  +N     +    +N+V+  + +E R   +   + +   + G  P+V   +Y
Sbjct: 255 DLAYVILQEINREKVPVEAMAYNMVMDGLCKEMR-LDEAEKLLENKARQGSNPDVYGYSY 313

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++   +   +  A+D +  M   G   N      +++         + ++   +  D G
Sbjct: 314 LIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSG 373

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           + L+             + +++ A ++F+ M   ++ PD +TY  L +  C++  + +  
Sbjct: 374 LHLD-------------KGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVF 420

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---VNFLEDK-------------CGY 371
           D+L+ M   GL P    +   + G C  G   E+    N +E+K             CGY
Sbjct: 421 DLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGY 480

Query: 372 VTSPH-----------------------NALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           + S                         + L+   C  G    A  + + M +  +  D 
Sbjct: 481 LLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDV 540

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S++  I   C+N ++ KA+     MV   +  D   Y+  + G CK    ++A ++F Q
Sbjct: 541 ISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQ 600

Query: 468 VSAQSLVLDSISYSKLVEGLCQ------VEKITEAVEVFCCMSKNGCSLSS--------- 512
           ++   +  D I+Y+ L++G  +       E I +    F   + +   LSS         
Sbjct: 601 MTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPD 660

Query: 513 -SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLV 568
              + +LI G C    + +A  L       G +     YT ++ G     ++ +A+DL  
Sbjct: 661 VPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDL-- 718

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            L +M+ +G   D   + +L QS     K++ CA
Sbjct: 719 -LQEMIDKGIEPDELTFSVLNQSSLRSRKIQFCA 751


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 153/714 (21%), Positives = 275/714 (38%), Gaps = 143/714 (20%)

Query: 69  VLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA------------------- 109
           VL        A + F W S Q  F H   TY  M   L  A                   
Sbjct: 101 VLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCA 160

Query: 110 ------------GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
                       G+++ +E   + M    +   +  L S++ ++ N  + + A+ V   +
Sbjct: 161 MSPGALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEI 220

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETN 216
              G+   VD   + +  +   K G  D  F + + M   GI  N  T   L+      +
Sbjct: 221 YGRGW---VDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQS 277

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           R++ AL  F++M K G  P+   ++ +I GL A   ++ ++ +L EM +LGI  ++   +
Sbjct: 278 RVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILS 337

Query: 277 CIIPMLCRE--------NKLE----EAIRL------------------------------ 294
            +IP    E         +LE    EA+ L                              
Sbjct: 338 KLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNY 397

Query: 295 --------FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
                   F M++ + + P   ++  +I+ LC   +LD A  +  DM+ +G      ++ 
Sbjct: 398 TDNFEVNKFFMVKEM-VRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYN 456

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
           +++  L    + +E    L++  G    P    HN++  C C       A   L+ + + 
Sbjct: 457 NLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGA---LDMVREM 513

Query: 403 KIADCDSW----NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
           ++   + W     + ++ LC+ +   +A   L  MV    +PD   YSA + G  K+   
Sbjct: 514 RVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAV 573

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           + AL +FR + A+    D ++Y+ L+ G C+V++++EA ++   M   G   S  ++N+L
Sbjct: 574 DQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLL 633

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I G C    +D+A    S            TYT ++ GL    R  D + +  +M  +GC
Sbjct: 634 IDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGC 693

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL-----ADGSQL 633
           +                                   P+R + ++L+HGL      D + L
Sbjct: 694 S-----------------------------------PNRISFIALIHGLCKCGWPDAALL 718

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
           +    G      + E  D+ +Y  LI         + A  +L  M+ KG  PD 
Sbjct: 719 YFREMG------ERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDP 766



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 140/334 (41%), Gaps = 53/334 (15%)

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           ++L+  CN+ KF  A  +  ++  R   D    +I +    +  E+ KA+EL+ RM    
Sbjct: 199 SVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERM---- 254

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
                                ED            + L+  ++  L+ G  +  ++ +A+
Sbjct: 255 ---------------------EDL----------GIRLNEKTFCVLIHGFVRQSRVDKAL 283

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM--- 554
           ++F  M K+G +   S ++ LI GLC  ++++KA+ L S     G        +K++   
Sbjct: 284 QLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYC 343

Query: 555 ---LGLVKL--QRAKDL----LVVLAQM----LVEGCALDVEAYCILIQSMSEQNKLKDC 601
              + + +L  +R +DL    +++L       LV G ++D   Y  L+ +M+  N   + 
Sbjct: 344 SEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYY--LLXAMTGDNYTDNF 401

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
            +    MVK  + P   +   ++ GL +  +L L  S    +V      +  +YN LI+ 
Sbjct: 402 EVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDK 461

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
           L       +   LL  M G G+ P   TH  + G
Sbjct: 462 LSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFG 495


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 135/602 (22%), Positives = 260/602 (43%), Gaps = 6/602 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY   I+       VEE   L + MV+         L +LV       R + A  +   M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           +  G   +   +  ++ ++ +  RG  + + +  EMV  G+V ++ T   L++ L +  +
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            +   D  R        PN  T+ ++I  L     VD++  +L EM +  I   +  ++ 
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +   L++A    +MM+   + P+ +TY  LI+   +    D A ++  DM+  G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----PHNALLECCCNAGKFFLAK 393
           +     +   +V GL + GK +E++   +D  G   S     +  L++    AG    A 
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              +++ DR  + D   +N+ I  LC   + ++A   L  M    + PD +TY+  ++  
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH 599

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+      AL++  ++   S+  + I+Y+ LV GL     + +A  +   M   G S SS
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +   ++      R++D  + +     ++G     + Y  ++  L      +   VVL +
Sbjct: 660 LTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML  G A D   +  LI    + + L +    +  M+   + P+  T  +LL GL    +
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           +    + + ++       ++  Y+IL  G  K+    +A  L   M+GKG+VP  +T+  
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 693 LV 694
           L+
Sbjct: 840 LI 841



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/567 (23%), Positives = 242/567 (42%), Gaps = 49/567 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  LG  G  +E++   +  + +           L+ +    + V+ A +VL+ M
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETN 216
                  +V  F+ V+   V  KRG  D    YK M+K  GI PNV T   L++  F+  
Sbjct: 406 EEKSISPNVVTFSSVINGFV--KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             ++AL+ +  M  +G   N    + ++ GL  N ++++++++  +    G+ L+   YT
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  L +   +  A +  + +   +++PD + Y   INCLC   +  +A   L +M  +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED---------------------------KC 369
           GL P    +  ++   C  G+  +++  L +                           K 
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 370 GYVT--------SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            Y+         SP    H  +L+ C  + +  +   I E M +  + AD   +N  ++ 
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC +   RKA  +L  M+ S + PD  T++A +LG CK  + ++A   + Q+  Q++  +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +++ L+ GL  V +I EA  V   M K+G   ++ +++IL  G        +A+RL  
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 537 LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                G     STY  ++    K   + +AK+L      M   G       Y IL+   S
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL---FKDMQKRGVHPTSCTYDILVSGWS 880

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETM 620
                 +       M + G  P + T+
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTL 907



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 132/600 (22%), Positives = 256/600 (42%), Gaps = 43/600 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV  F    +V+ A  VL  M   G   +V  +   +      K G  +   +Y+ MV+
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK-GVEEAFDLYEGMVR 267

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G++ +V TL+ L+  L    R   A   FR M K G  PN  T+  +I  L    R  +
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +S+LGEM   G+ ++L  YT ++  L ++ K +E     +   + +L P+ +TY  LI+
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----------- 364
            LC+   +D+A  +L +M    ++P    F  ++ G  + G  D++  +           
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 365 --------------LEDKCGYVTSPHNALLECCCNAGKFFLAKC---------ILEKMAD 401
                          + +   +   H+ L E      KF +            I E MA 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV-KVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 402 RKIA-------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            K A       D  ++   I  L +  ++  A++    ++  +++PD   Y+ F+   C 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L  +++A     ++    L  D  +Y+ ++   C+  +  +A+++   M  +    +  +
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N L+ GL     V+KA  L +   S+G S ++ T+ +++    + +R   +L +   M+
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D+  Y  L+Q +      +   +    M+ +G+ PD  T  +L+ G    S L 
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   +++  +   + + +N L+ GL   G   +A  +L  M   G  P+  T+ +L 
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 124/567 (21%), Positives = 231/567 (40%), Gaps = 44/567 (7%)

Query: 182 GFAD---FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           GF D    + V   M   G+  +V   N L+       ++++A      M + G  PN  
Sbjct: 181 GFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+   I        V+++  +   M   G+ L++   + ++  LCR+ +  EA  LF+ M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
             +   P+ +TY  LI+ L +  R  +   +L +M+  G+      +  ++  L + GK 
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIP 413
           DE  + L        SP    +  L++  C A     A+ +L +M ++ I+ +  +++  
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I    +   + KA E    M    + P+  TY   + G  K    + AL V+  +  + +
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG------------ 521
            ++      LV GL Q  KI EA+ +F   S +G SL   ++  LI G            
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 522 -----------------------LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
                                  LC++ K  +A    +   + G     STY  +++   
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           +       L +L +M +     ++  Y  L+  +     ++      N MV AG  P   
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSL 660

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T   +L   +   +L ++      +++     D ++YN L+  L   G+T +A+ +L+ M
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 679 LGKGWVPDATT-HGLLVGSSVGEEIDS 704
           LG G  PD  T + L++G      +D+
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDN 747



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 122/533 (22%), Positives = 218/533 (40%), Gaps = 47/533 (8%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +N++L A+ +     A    V  EM K G+  +  T+N LL  L    ++++A      
Sbjct: 105 AYNILLAALSDHAHAPA----VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL--A 158

Query: 228 MHKKGCCP-NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
               G  P  S    + +  +        ++S+   M   G+ +++  Y  ++   CR  
Sbjct: 159 DRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +++ A  +  MM+   + P+  TY   I   C    +++A D+ E M+  G+        
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 347 DIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
            +V GLC  G+F E+       DK G   +P++             +  C L        
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVG--AAPNH-------------VTYCTL-------- 315

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV--LGK-CKLCNYEDA 461
                    I  L +    ++   LLG MV   VV D  TY+A +  LGK  K    +D 
Sbjct: 316 ---------IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDT 366

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           LR      + +L  + ++Y+ L++ LC+   + EA +V   M +   S +  +F+ +I G
Sbjct: 367 LRF---ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVING 423

Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
                 +DKA   + +    G +    TY  ++ G  K Q     L V   ML EG  ++
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVN 483

Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
                 L+  + +  K+++    F     +GL  D     +L+ GL     +        
Sbjct: 484 KFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQ 543

Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +L+  + + D+ +YN+ IN L   G   +A   L  M   G  PD +T+  ++
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 124/289 (42%), Gaps = 1/289 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L   G VE+ + L   MV   +         ++ +     R++  + +   M
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G    + V+N +L  +          V V +EM+ +GI P+  T N L+    +++ 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATV-VLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +++A   + +M  +   PN  TF  ++ GL +  R+ ++ ++L EM   G++     Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +     +++   EA+RL+  M     +P   TY  LI+   +   +  A ++ +DM   G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
           + PT   +  +V G   +    E    L+D      SP    L   C A
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/544 (23%), Positives = 219/544 (40%), Gaps = 43/544 (7%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G K+ V V +++L  +   KR       +   M + G+ P+  + N +++ L E +R + 
Sbjct: 149 GLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQR 208

Query: 221 ALDQFRRMHKK--GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           ALD    M KK  GC PN  T+  VI GL     V  + ++  EM   G+  ++  YT I
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSI 268

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LC+   +++A  + + M +    P+++TY  +I+    + +  +   +  +M   GL
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGL 328

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKC 394
            P        +  LC+ GK  E+  F +        P    ++ LL      G F     
Sbjct: 329 MPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLN 388

Query: 395 ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           +   M    I AD   +NI I    +   + +   +  +M    V+PD  TY   +    
Sbjct: 389 LFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFS 448

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS- 512
           ++    DA+  F Q+ A  L  + I Y  L++G C    + +A E+   M   G    + 
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNI 508

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             FN +I  LC   +V +A  +       G      T+  ++ G   + + +    VL  
Sbjct: 509 VFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDA 568

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M+  G   DV +Y  LI       ++ D  + F  M+  G+ P   T             
Sbjct: 569 MISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTIT------------- 615

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                                 Y I+++GL+ +G T  A  +   M+  G   D +T G+
Sbjct: 616 ----------------------YGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653

Query: 693 LVGS 696
           ++G 
Sbjct: 654 ILGG 657



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/578 (20%), Positives = 261/578 (45%), Gaps = 13/578 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L   G V +   L   M+++   P+V     S++ +      ++ A  VL  
Sbjct: 229 TYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDV-VTYTSIIDALCKARAMDKAELVLRQ 287

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S GF+ +   +N ++       + + +   +++EM   G++PN+ T N  +  L +  
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQ-WKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHG 346

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           + + A + F  M  KG  PN  T+ +++ G        D +++   M   GI  +   + 
Sbjct: 347 KSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFN 406

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I    +   ++E + +F  M+   ++PD  TY  +I       RL DA D    MI +
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY-VTSPH----NALLECCCNAGKFFL 391
           GL P   V+  +++G C  G   ++   + +     +  P+    N+++   C  G+   
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 392 AKCILE---KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
           A  I +    + +R   D  ++N  I       +I KA+ +L  M+ + + PD  +Y+  
Sbjct: 527 AHDIFDFVIHIGER--PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G C+    +D L +F ++ ++ +   +I+Y  ++ GL    +   A ++   M ++G 
Sbjct: 585 IDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
           ++  S+  I++ GLC     D+AI +     +    +  +    ++  + K+++ ++   
Sbjct: 645 TMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKE 704

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +   +   G   +   Y ++I+++ ++  +++    F++M K+G  P    +  ++  L 
Sbjct: 705 LFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLL 764

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           +  ++    + + K+      L++S  ++L+    +EG
Sbjct: 765 EKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREG 802



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 114/534 (21%), Positives = 231/534 (43%), Gaps = 9/534 (1%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVK--AGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
           +N V+  + E+ R       ++  MVK   G  PNV T N ++  LF    +  A + F 
Sbjct: 193 YNTVVKTLCEDSRSQRALDLLHT-MVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFH 251

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M ++G  P+  T+  +I  L     +D +  +L +M   G Q     Y C+I       
Sbjct: 252 EMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISG 311

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           + +E   +F+ M +  LMP+ +T    ++ LC++ +  +A +  + M   G  P    + 
Sbjct: 312 QWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYS 371

Query: 347 DIVRGLCEVGKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADR 402
            ++ G    G F + +N     +  G V      N +++     G       I  +M ++
Sbjct: 372 VLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQ 431

Query: 403 K-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
             I D  ++ I I        +  A +   +M+   + P+   Y + + G C   N   A
Sbjct: 432 GVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKA 491

Query: 462 LRVFRQVSAQSLVLDSIS-YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
             +  ++ ++ +   +I  ++ ++  LC+  ++ EA ++F  +   G      +FN LI 
Sbjct: 492 KELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLID 551

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           G  ++ K++KA  +     S+G      +Y  ++ G  +  R  D L++  +ML +G   
Sbjct: 552 GYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKP 611

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
               Y I++  +    +        + M+++G   D  T   +L GL   +      +  
Sbjct: 612 TTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMF 671

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            KL + +   + ++ N +I+ ++K     +A  L D +   G VP+A+T+G+++
Sbjct: 672 KKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMI 725



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 96/467 (20%), Positives = 193/467 (41%), Gaps = 40/467 (8%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P   T+ I++       R     ++ G     G+++++   + ++  L    + ++ + L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 295 F-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI--GLTPTDDVFVDIVRG 351
               M  L + PD ++Y  ++  LCE+ R   A D+L  M+    G +P    +  ++ G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 352 LCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
           L   G+  ++ N                                 E M    + D  ++ 
Sbjct: 237 LFREGEVSKACNLFH------------------------------EMMQQGVVPDVVTYT 266

Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
             I  LC+   + KA  +L +M+ +   P+  TY+  + G      +++   +FR++++Q
Sbjct: 267 SIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQ 326

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            L+ + ++ +  +  LC+  K  EA E F  M+  G   +  ++++L++G          
Sbjct: 327 GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDM 386

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L +    +G       +  ++    K     + +++  QM  +G   D   Y I+I +
Sbjct: 387 LNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAA 446

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL----HLVSSGINKLVSDS 647
            S   +L D    FN M+  GL P+     SL+ G      L     LVS  +++ +   
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRP 506

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            ++    +N +IN L KEG   +A  + D ++  G  PD  T   L+
Sbjct: 507 NIV---FFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLI 550



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 163 KLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           K ++ + N ++ A+ +  KR  A  +F    +   G+VPN  T   +++ L +   +E A
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEAKELF--DSISATGLVPNASTYGVMIKNLLKEGSVEEA 737

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
            + F  M K GC P+SR    +I+ L+    +  + + + ++    I LE S  + ++ +
Sbjct: 738 DNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMAL 797

Query: 282 LCRENKLEEAIRLF 295
             RE K  E ++L 
Sbjct: 798 FSREGKYWEDVKLL 811


>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
          Length = 906

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 227/523 (43%), Gaps = 36/523 (6%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E+V + ++P    LN ++  +    R++ +     ++   GC P+  T+ IVIK L   +
Sbjct: 365 EIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQN 424

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R+DD+ +++  M   G++ ++S  + ++   C+  ++E A+ LF  M    + P    Y+
Sbjct: 425 RMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYD 484

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG---------LCEVGKFDESV 362
            +I CLC   RL +A   L  MI  GL P + ++  ++ G         +C +  FDE +
Sbjct: 485 SIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRI--FDEML 542

Query: 363 NFLEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIADCDS-WNIPIRWLCE 419
                K G    PH   +L+       K   A   LE+M +  IA     + + I     
Sbjct: 543 -----KRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFR 597

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL------ 473
             ++R   +L+  M+ ++V PD  TY A V G C+      A R  R   A+ L      
Sbjct: 598 KGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICR----NIARRGMRPSLAKKLKEARYM 653

Query: 474 -------VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
                  ++D+ +  +    +C  E I  A  +   + +NG       +N +I GLC   
Sbjct: 654 LFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRAN 713

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K+D A  L S+   +G      TYT +M   ++L      + +   +  +GC  D   Y 
Sbjct: 714 KMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYN 773

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
             I+ +S   ++K+   F  +M K G VP + +   L+  L   + + +V      ++  
Sbjct: 774 TFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQ 833

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                 + Y  L+  L K+G  S+A  +  +ML K    D  T
Sbjct: 834 GYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKRKYLDKKT 876



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 224/498 (44%), Gaps = 22/498 (4%)

Query: 219 ESALDQ----FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           E A+D+    F  M + G  P  R +  +        R  D+  +   M   G+ L+   
Sbjct: 130 EGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLMLIKGMYLDREL 189

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALD-LMPDELTYEELINCLCENLRLDDANDILEDM 333
            T +I + CRE +LE A+ +F+ M+  + +  D   Y  +I  L E+ R+D    +  +M
Sbjct: 190 STALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEM 249

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSPHNALLECC--------C 384
           I  G+ P    +  ++R  C+      +++  +D K G   +  + +LE           
Sbjct: 250 IDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKDGKLGEAENLFDKMLESGLFPDHVMFI 309

Query: 385 NAGKFFLAKCIL--EKMADRKIA--DCDSWNIPIRWL---CENEEIRK-AYELLGRMVVS 436
           +  +FF    ++   + A + +A  DC +  + +  L   C N  ++K A  LL  +V S
Sbjct: 310 SIARFFPKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTS 369

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
           +V+P     +  ++  C     + +  +  ++ A       ++Y+ +++ LC+  ++ +A
Sbjct: 370 NVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDA 429

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             +   M   G     S+ +I++   C + +++ A+ L       G   + + Y  I++ 
Sbjct: 430 RALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVC 489

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L +++R K+    L QM+ EG A D   Y  LI   S   + ++    F+ M+K GL P 
Sbjct: 490 LCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPG 549

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                SL++GL  G+++      + +++ +     + +Y +LIN  +++G       L+ 
Sbjct: 550 PHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVV 609

Query: 677 LMLGKGWVPDATTHGLLV 694
           LM+     PD  T+G LV
Sbjct: 610 LMMKTNVAPDLITYGALV 627



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 132/606 (21%), Positives = 235/606 (38%), Gaps = 67/606 (11%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G    V V+  +  A  + +R   D   + + M+  G+  + +    L+ V     
Sbjct: 143 MLRSGLTPPVRVYRSLAFAYCKARRSL-DASDMCQLMLIKGMYLDRELSTALIRVFCREG 201

Query: 217 RIESALDQFRRMH-KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           R+E ALD FRRM   +    ++  +  +I GL  + RVD  + +  EM D GIQ + + Y
Sbjct: 202 RLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATY 261

Query: 276 TCIIPMLCR------------ENKLEEAIRLFKMMRALDLMPDELTYEELINCL------ 317
             +I   C+            + KL EA  LF  M    L PD + +  +          
Sbjct: 262 NVMIRWYCKSKWVGAAMDIYKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVV 321

Query: 318 ----------------------------CENLRLD-DANDILEDMIVIGLTPTDDVFVDI 348
                                       C N+ L  +A+ +L++++   + P + V   +
Sbjct: 322 LFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLM 381

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  +C  G+ D S   L     Y   P    +N +++C C   +   A+ ++  M  R +
Sbjct: 382 IIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGV 441

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  + +I +   C+  EI  A  L G M    + P  A Y + ++  C++   ++A  
Sbjct: 442 RPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEA 501

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
             RQ+  + L  D I Y+ L+ G     +      +F  M K G      ++  LI GL 
Sbjct: 502 TLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLV 561

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              K+ KA+         G +  T  YT ++    +    +  L ++  M+    A D+ 
Sbjct: 562 KGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLI 621

Query: 584 AYCILIQSM-----------SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            Y  L+  +           S   KLK+       M+    + D        + +     
Sbjct: 622 TYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQ--IIDTRNGKQKDNQICTEEM 679

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           + +    I  L  +  V D  +YN +INGL +      A  LL +M   G +P+  T+ +
Sbjct: 680 IQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTI 739

Query: 693 LVGSSV 698
           L+ + +
Sbjct: 740 LMNNQI 745



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/448 (20%), Positives = 187/448 (41%), Gaps = 28/448 (6%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           +V ++     +  A+ +   M   G + S+ V++ ++  +   +R   +     ++M++ 
Sbjct: 451 MVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRR-LKEAEATLRQMIRE 509

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+ P+      L+     T +  +    F  M K+G  P    +  +I GL+  +++  +
Sbjct: 510 GLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKA 569

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +  L  M + GI  +   YT +I    R+  +   + L  +M   ++ PD +TY  L+  
Sbjct: 570 LGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTG 629

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           +C N+               G+ P+               K  E+   L      +    
Sbjct: 630 ICRNIARR------------GMRPS------------LAKKLKEARYMLFRMLPQIIDTR 665

Query: 377 NALLE--CCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRM 433
           N   +    C      +A+ I++ + +   + D   +N  I  LC   ++  AY LL  M
Sbjct: 666 NGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVM 725

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
             + ++P+  TY+  +  + +L +   A+++F  +++   V D I+Y+  ++GL    ++
Sbjct: 726 DQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRM 785

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
            EA+     M K G   S +S++ L+  L     +D  ++L       G +   + YT +
Sbjct: 786 KEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSL 845

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALD 581
           +L L K  R  +   +   ML +   LD
Sbjct: 846 LLVLAKDGRWSEADRIFTMMLKKRKYLD 873



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/502 (20%), Positives = 203/502 (40%), Gaps = 24/502 (4%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I SAL  F R+ + G  P+  +   +++ + + S   +++ +L         L +S +  
Sbjct: 63  ISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDVLVLSMGNPSPLPVSDFAL 122

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +IP LC E  +++A  LF  M    L P    Y  L    C+  R  DA+D+ + M++ G
Sbjct: 123 LIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLMLIKG 182

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC--- 394
           +    ++   ++R  C  G+ + +++      G      +A        G F   +    
Sbjct: 183 MYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHG 242

Query: 395 --ILEKMADRKI-ADCDSWNIPIRWLCENE------------EIRKAYELLGRMVVSSVV 439
             +  +M DR I  D  ++N+ IRW C+++            ++ +A  L  +M+ S + 
Sbjct: 243 LQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKDGKLGEAENLFDKMLESGLF 302

Query: 440 PDCATY---SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
           PD   +   + F      +     AL+   ++   + +L+    S L  G   +    EA
Sbjct: 303 PDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLLE---LSSLAGGCSNMSLQKEA 359

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
             +   +  +     +   N++I  +C   ++D +  L     + G   +  TY  ++  
Sbjct: 360 DHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKC 419

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L +  R  D   ++  M   G   D+    I++ +  +  +++     F  M K G+ P 
Sbjct: 420 LCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPS 479

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
                S++  L    +L    + + +++ +    D  +Y  LING      T     + D
Sbjct: 480 IAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFD 539

Query: 677 LMLGKGWVPDATTHGLLVGSSV 698
            ML +G  P    +G L+   V
Sbjct: 540 EMLKRGLQPGPHAYGSLINGLV 561



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 13/261 (4%)

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            PD A   A V    +L +   AL  F ++          S + L+  +C     TEA++
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           V      N   L  S F +LI GLC    VDKA  L      SG +     Y  +     
Sbjct: 104 VLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP-DR 617
           K +R+ D   +   ML++G  LD E    LI+    + +L+     F  M     V  D 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN------------GLWKE 665
               +++ GL +  ++       ++++      D++ YN++I              ++K+
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKD 283

Query: 666 GLTSQASYLLDLMLGKGWVPD 686
           G   +A  L D ML  G  PD
Sbjct: 284 GKLGEAENLFDKMLESGLFPD 304


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 135/602 (22%), Positives = 260/602 (43%), Gaps = 6/602 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY   I+       VEE   L + MV+         L +LV       R + A  +   M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           +  G   +   +  ++ ++ +  RG  + + +  EMV  G+V ++ T   L++ L +  +
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            +   D  R        PN  T+ ++I  L     VD++  +L EM +  I   +  ++ 
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +   L++A    +MM+   + P+ +TY  LI+   +    D A ++  DM+  G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----PHNALLECCCNAGKFFLAK 393
           +     +   +V GL + GK +E++   +D  G   S     +  L++    AG    A 
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              +++ DR  + D   +N+ I  LC   + ++A   L  M    + PD +TY+  ++  
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH 599

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+      AL++  ++   S+  + I+Y+ LV GL     + +A  +   M   G S SS
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +   ++      R++D  + +     ++G     + Y  ++  L      +   VVL +
Sbjct: 660 LTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML  G A D   +  LI    + + L +    +  M+   + P+  T  +LL GL    +
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           +    + + ++       ++  Y+IL  G  K+    +A  L   M+GKG+VP  +T+  
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 693 LV 694
           L+
Sbjct: 840 LI 841



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 227/514 (44%), Gaps = 46/514 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  LG  G  +E++   +  + +           L+ +    + V+ A +VL+ M
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETN 216
                  +V  F+ V+   V  KRG  D    YK M+K  GI PNV T   L++  F+  
Sbjct: 406 EEKSISPNVVTFSSVINGFV--KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             ++AL+ +  M  +G   N    + ++ GL  N ++++++++  +    G+ L+   YT
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  L +   +  A +  + +   +++PD + Y   INCLC   +  +A   L +M  +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED---------------------------KC 369
           GL P    +  ++   C  G+  +++  L +                           K 
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 370 GYVT--------SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            Y+         SP    H  +L+ C  + +  +   I E M +  + AD   +N  ++ 
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC +   RKA  +L  M+ S + PD  T++A +LG CK  + ++A   + Q+  Q++  +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +++ L+ GL  V +I EA  V   M K+G   ++ +++IL  G        +A+RL  
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 537 LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLL 567
                G     STY  ++    K   + +AK+L 
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 132/600 (22%), Positives = 256/600 (42%), Gaps = 43/600 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV  F    +V+ A  VL  M   G   +V  +   +      K G  +   +Y+ MV+
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK-GVEEAFDLYEGMVR 267

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G++ +V TL+ L+  L    R   A   FR M K G  PN  T+  +I  L    R  +
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +S+LGEM   G+ ++L  YT ++  L ++ K +E     +   + +L P+ +TY  LI+
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----------- 364
            LC+   +D+A  +L +M    ++P    F  ++ G  + G  D++  +           
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 365 --------------LEDKCGYVTSPHNALLECCCNAGKFFLAKC---------ILEKMAD 401
                          + +   +   H+ L E      KF +            I E MA 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV-KVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 402 RKIA-------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            K A       D  ++   I  L +  ++  A++    ++  +++PD   Y+ F+   C 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L  +++A     ++    L  D  +Y+ ++   C+  +  +A+++   M  +    +  +
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N L+ GL     V+KA  L +   S+G S ++ T+ +++    + +R   +L +   M+
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D+  Y  L+Q +      +   +    M+ +G+ PD  T  +L+ G    S L 
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   +++  +   + + +N L+ GL   G   +A  +L  M   G  P+  T+ +L 
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 220/535 (41%), Gaps = 51/535 (9%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL---DQ 224
            +N++L A+ +     A    V  EM K G+  +  T+N LL  L    ++++A    D+
Sbjct: 105 AYNILLAALSDHAHAPA----VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR 160

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              +H          +  +I G         ++S+   M   G+ +++  Y  ++   CR
Sbjct: 161 GGGIHALDVI----GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +++ A  +  MM+   + P+  TY   I   C    +++A D+ E M+  G+      
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 345 FVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
              +V GLC  G+F E+       DK G   +P++             +  C L      
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVG--AAPNH-------------VTYCTL------ 315

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV--LGK-CKLCNYE 459
                      I  L +    ++   LLG MV   VV D  TY+A +  LGK  K    +
Sbjct: 316 -----------IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           D LR      + +L  + ++Y+ L++ LC+   + EA +V   M +   S +  +F+ +I
Sbjct: 365 DTLRF---ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G      +DKA   + +    G +    TY  ++ G  K Q     L V   ML EG  
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           ++      L+  + +  K+++    F     +GL  D     +L+ GL     +      
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +L+  + + D+ +YN+ IN L   G   +A   L  M   G  PD +T+  ++
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 121/557 (21%), Positives = 227/557 (40%), Gaps = 41/557 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V   M   G+  +V   N L+       ++++A      M + G  PN  T+   I    
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               V+++  +   M   G+ L++   + ++  LCR+ +  EA  LF+ M  +   P+ +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI+ L +  R  +   +L +M+  G+      +  ++  L + GK DE  + L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
                SP    +  L++  C A     A+ +L +M ++ I+ +  +++  I    +   +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA E    M    + P+  TY   + G  K    + AL V+  +  + + ++      L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG---------------------- 521
           V GL Q  KI EA+ +F   S +G SL   ++  LI G                      
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 522 -------------LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                        LC++ K  +A    +   + G     STY  +++   +       L 
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L +M +     ++  Y  L+  +     ++      N MV AG  P   T   +L   +
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              +L ++      +++     D ++YN L+  L   G+T +A+ +L+ MLG G  PD  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 689 T-HGLLVGSSVGEEIDS 704
           T + L++G      +D+
Sbjct: 731 TFNALILGHCKSSHLDN 747



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/456 (21%), Positives = 206/456 (45%), Gaps = 17/456 (3%)

Query: 120 QNMVKER--YPNV--REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
           + M+KER   PNV     LI   F F      + A+ V  +M   G K++  + + ++  
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQ---DAALEVYHDMLCEGVKVNKFIVDSLVNG 493

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY--LLEVLFETNRIESALDQFRRMHKKGC 233
           + +  +   + + ++K+   +G+  ++D +NY  L++ LF+   + +A    + +  +  
Sbjct: 494 LRQNGK-IEEAMALFKDASGSGL--SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P++  + + I  L    +  ++ S L EM ++G++ + S Y  +I   CR+ +  +A++
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           L   M+   + P+ +TY  L+  L     ++ A  +L +M+  G +P+      +++   
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 354 EVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCD 408
           +  + D  ++  E           + +N LL+  C  G    A  +LE+M    IA D  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I   C++  +  A+    +M+  ++ P+ AT++  + G   +    +A  V  ++
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               L  ++++Y  L  G  +     EA+ ++C M   G     S++N LI        +
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +A  L       G   T+ TY  ++ G   L R +
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQ 886



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 4/283 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L   G VE+ + L   MV   +         ++ +     R++  + +   M
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G    + V+N +L  +          V V +EM+ +GI P+  T N L+    +++ 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATV-VLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +++A   + +M  +   PN  TF  ++ GL +  R+ ++ ++L EM   G++     Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +     +++   EA+RL+  M     +P   TY  LI+   +   +  A ++ +DM   G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVN--FLEDKCGYVTSPHNA 378
           + PT   +  +V G  ++ +  +S N  F E  C +  S H +
Sbjct: 865 VHPTSCTYDILVSGWYDLAREQKSQNTYFTEIYC-FSASRHQS 906


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/599 (21%), Positives = 237/599 (39%), Gaps = 77/599 (12%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           H+  ++      S AL+ F+W S    F H   TY  +I KL      E ++ +   M  
Sbjct: 96  HIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPS 155

Query: 125 E-RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P      +++V        V   ++VL  +   G   S+ +FN +L  +V+E    
Sbjct: 156 SIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDL 215

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           A   F  K+M+  G+  +  T   L++ L  TNRI  A    + M  +G  PN+  +  +
Sbjct: 216 AR-EFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTM 274

Query: 244 IKGLIANSRVDDSVSILGEM-------------------------------FDLGIQLEL 272
           I  L  N +V  + S++ EM                               F +G   ++
Sbjct: 275 IHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDV 334

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
              T ++ +LC+  ++ E + + + + ++  + D + Y  LI   C   +    + +L+D
Sbjct: 335 VTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKD 394

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGK 388
           M + G  P  D +  +  G C+ G  D +++   D       +    ++ L+   C+ G+
Sbjct: 395 MEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGR 454

Query: 389 FFLAKCILEKMADRKIA---DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                 ILE M + +         +N  I  L +  +  +A E L +M    + P     
Sbjct: 455 MEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM--EKLFPRAVDR 512

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           S  +LG C   +  DA RV+ Q+  +  V   + Y  L+ G CQ   + EA E+   M  
Sbjct: 513 SLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVD 572

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           +G   ++ +FN LI   C   KV  A++L                               
Sbjct: 573 HGYFPTAPTFNALISAFCGQGKVGSALKL------------------------------- 601

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
               +  M+  GC  D+ +Y  ++ ++  +   +     F  MV+  ++PD  T  S+L
Sbjct: 602 ----MEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 656



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/503 (22%), Positives = 207/503 (41%), Gaps = 10/503 (1%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK-GCCPNSRTFEIVIKGLIANSRVDDS 256
            + N  T   L+  L    R E+  +    M    G  P+   F  +++GL     V   
Sbjct: 123 FIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQM 182

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCREN--KLEEAIRLFKMMRALDLMPDELTYEELI 314
           + +L  +   G    L  +  I+ +L +E+     E  R   MM  +    D+ T+  L+
Sbjct: 183 IKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVS--GDDYTFGILM 240

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
             LC   R+ DA  +L+ M   G TP   ++  ++  LC+ GK   + + + +       
Sbjct: 241 KGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSDV 300

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRM 433
             N L+   C       A  +LEK      + D  +    +  LC+   + +  E+L R+
Sbjct: 301 TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERV 360

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                V D   Y+  + G C L   +   RV + +  +  + +  +Y+ L  G C    +
Sbjct: 361 ESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGML 420

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS--GTSYTTSTYT 551
             A+++F  M  +G + +  +++ LI GLC   +++   ++  L   S  G     S Y 
Sbjct: 421 DSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYN 480

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            I+ GL K  + ++ L  L +M  E          + I     +  + D    ++ M+K 
Sbjct: 481 SIIYGLYKKNQFEEALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKE 538

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G VP     + L+HG      +      IN++V       +  +N LI+    +G    A
Sbjct: 539 GGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSA 598

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             L++ M+G+G +PD  ++  +V
Sbjct: 599 LKLMEDMVGRGCLPDMGSYSPMV 621



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)

Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
           G+I + KR       VY +M+K G VP+V     L+    +   +  A +    M   G 
Sbjct: 523 GSIGDAKR-------VYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGY 575

Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            P + TF  +I       +V  ++ ++ +M   G   ++  Y+ ++  LC +   ++A+R
Sbjct: 576 FPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVR 635

Query: 294 LFKMMRALDLMPDELTYEELINCLCE 319
           LF  M   D++PD  T+  ++ CL +
Sbjct: 636 LFLQMVEKDILPDYSTWNSMLLCLTQ 661


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 203/438 (46%), Gaps = 5/438 (1%)

Query: 183  FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            F D   ++ EM+++  +P++     +L V+ + N+ +  +  + +M   G   +  +F I
Sbjct: 585  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +I      SR+  ++++LG+M  LG +  +     ++   C+ N+ +EA+ L   M    
Sbjct: 645  LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             +P+ + Y  +IN LC+N  L++A ++   M   G+      +  ++ GL   G++ ++ 
Sbjct: 705  FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 363  NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
              L D       P+     AL++     G    A+ + ++M  R +  +  ++N  I   
Sbjct: 765  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824

Query: 418  CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
            C +  +  A  +   MV     PD  TY+  + G CK    ED +++F +++ Q LV D+
Sbjct: 825  CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884

Query: 478  ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
             +Y+ L+ G CQ  K+  A +VF  M   G S    ++NIL+  LC   K++KA+ +   
Sbjct: 885  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 944

Query: 538  AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               S       TY  I+ GL +  + K+   +   +  +G   D  AY  +I  +  +  
Sbjct: 945  LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004

Query: 598  LKDCALFFNVMVKAGLVP 615
             ++       M + G +P
Sbjct: 1005 QREADKLCRRMKEDGFMP 1022



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 198/437 (45%), Gaps = 5/437 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   ++ EMV +  +P++     LL       R E+ +   ++M   G   +  +F I
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I      SR+  ++S+LG+M  LG +  +  +  ++   C  N++ +A  L  +M    
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ + Y  LI+ LC+N  L+ A ++L +M   GL      +  ++ GLC  G++ ++ 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWL 417
             L D      +P      AL++     G    A+ + ++M    +   + ++N  I  L
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C +  +  A +    M      P+  TY+  + G CK    ++ +++F+++S +    D 
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y+ L+ G CQV K+  A+++FC M     +    +  IL++GLCV  +++ A+     
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              S        Y  ++ GL K  + +    +  ++ VEG   D   Y I+I  + +   
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 598 LKDCALFFNVMVKAGLV 614
            ++       M + G++
Sbjct: 472 RREADELIRRMKEEGII 488



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 209/476 (43%), Gaps = 9/476 (1%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           + + RE L +    F++  R   A  +   M       S+  F  +L A    +R +   
Sbjct: 35  FSDYREKLRT---GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRR-YETV 90

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           ++  ++M   GI  ++ +   L+      +R+  AL    +M K G  P+  TF  ++ G
Sbjct: 91  IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
               +R+ D+ S++  M   G +  +  Y  +I  LC+  +L  A+ L   M    L  D
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  L+  LC + R  DA  +L DM+   + P    F  ++    + G  DE+    +
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
           +       P    +N+++   C  G+ + AK   + MA +    +  ++N  I   C+  
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + +  +L  RM       D  TY+  + G C++     AL +F  + ++ +  D I++ 
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GLC   +I  A+  F  M ++   +   ++NI+I+GLC   KV+KA  L       
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           G      TYT ++LGL K    ++   ++ +M  EG    + A    ++  S  NK
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK 506



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 203/444 (45%), Gaps = 5/444 (1%)

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G + + R +D+ ++  EM        +  +T ++       + E  I   + M    +  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF- 364
           D  ++  LI+C C   RL  A  +L  M+ +G  P+   F  ++ G C V +  ++ +  
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 365 -LEDKCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
            L  K GY  +   +N L++  C  G+  +A  +L +M  + + AD  ++N  +  LC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
                A  +L  M+  S+ PD  T++A +    K  N ++A  +++++   S+  ++++Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++ GLC   ++ +A + F  M+  GC  +  ++N LI G C  R VD+ ++L      
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G +    TY  ++ G  ++ + +  L +   M+      D+  +CIL+  +    +++ 
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
             + F+ M ++           ++HGL    ++        +L  +    D+  Y I+I 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 661 GLWKEGLTSQASYLLDLMLGKGWV 684
           GL K G   +A  L+  M  +G +
Sbjct: 465 GLCKNGPRREADELIRRMKEEGII 488



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 203/453 (44%), Gaps = 25/453 (5%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R F+D    Y+E ++ G + ++              R E A   F  M      P+   F
Sbjct: 33  RAFSD----YREKLRTGFLHSI--------------RFEDAFALFFEMVHSQPLPSIVDF 74

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDL-GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
             ++    AN R  ++V    +  +L GI  +L  +T +I   CR ++L  A+ +   M 
Sbjct: 75  TRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            L   P  +T+  L++  C   R+ DA  ++  M+  G  P   V+  ++ GLC+ G+ +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193

Query: 360 ---ESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
              E +N +E K  G     +N LL   C +G++  A  +L  M  R I  D  ++   I
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
               +   + +A EL   M+ SSV P+  TY++ + G C      DA + F  ++++   
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + ++Y+ L+ G C+   + E +++F  MS  G +    ++N LI+G C + K+  A+ +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                S   +    T+  ++ GL      +  LV    M      + + AY I+I  + +
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +K++     F  +   G+ PD  T   ++ GL
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/439 (23%), Positives = 181/439 (41%), Gaps = 30/439 (6%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           + DD+ S+  EM        +  +T ++ ++ + NK +  I L+  M  L +  D  ++ 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+C C   RL  A  +L  M+ +G  P+      ++ G C+  +F E+V+ ++   G+
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
              P+  +                              +N  I  LC+N ++  A E+  
Sbjct: 704 GFVPNVVI------------------------------YNTVINGLCKNRDLNNALEVFY 733

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    +  D  TY+  + G      + DA R+ R +  + +  + I ++ L++   +  
Sbjct: 734 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 793

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EA  ++  M +     +  ++N LI G C+   +  A  +  L  S G      TY 
Sbjct: 794 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 853

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K +R +D + +  +M  +G   D   Y  LI    +  KL      FN MV  
Sbjct: 854 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 913

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+ PD  T   LL  L +  ++      +  L      +D   YNI+I GL +     +A
Sbjct: 914 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 973

Query: 672 SYLLDLMLGKGWVPDATTH 690
             L   +  KG  PDA  +
Sbjct: 974 WCLFRSLTRKGVKPDAIAY 992



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 137/616 (22%), Positives = 245/616 (39%), Gaps = 50/616 (8%)

Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
           GN++E + L + M++           S++     H R+  A +    M S G   +V  +
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319

Query: 170 NVVLGAIVEEKRGFADFVFV------YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           N ++        GF  F  V      ++ M   G   ++ T N L+    +  ++  ALD
Sbjct: 320 NTLIS-------GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
            F  M  +   P+  T  I++ GL  N  ++ ++    +M +    + +  Y  +I  LC
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM----IVIGLT 339
           + +K+E+A  LF  +    + PD  TY  +I  LC+N    +A++++  M    I+  + 
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMN 492

Query: 340 PTDDVF-------VDIVRGLCEVGKFDESVNFLEDKC----------GYVTSPHNALLEC 382
             DD          +I   L E+ +  +S  F   +           G+V   H  LLE 
Sbjct: 493 AEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRR-HYLLLER 551

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE----EIRKAYELLGRMVVSSV 438
             N           E    R  +   S +   R    NE    +   A+ L   M+ S  
Sbjct: 552 GNNP----------ETSLSRSFSGA-SHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRP 600

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
           +P    ++  +    K+  ++  + ++ ++    +  D  S++ L+   C+  +++ A+ 
Sbjct: 601 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 660

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M K G   S  +   L+ G C   +  +A+ L       G       Y  ++ GL 
Sbjct: 661 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 720

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K +   + L V   M  +G   D   Y  LI  +S   +  D A     MVK  + P+  
Sbjct: 721 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
              +L+        L    +   +++  S V +   YN LING    G    A Y+ DLM
Sbjct: 781 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840

Query: 679 LGKGWVPDATTHGLLV 694
           + KG  PD  T+  L+
Sbjct: 841 VSKGCFPDVVTYNTLI 856



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 159/705 (22%), Positives = 268/705 (38%), Gaps = 94/705 (13%)

Query: 57  LRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGN 111
           ++ +++PD      LI V     +L  A +++K + IQ        TY  +I  L + G 
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNNVTYNSIINGLCMHGR 296

Query: 112 VEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
           + + +     M  K  +PNV     +L+  F     V+  M++   M+  GF   +  +N
Sbjct: 297 LYDAKKTFDLMASKGCFPNV-VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355

Query: 171 VVLGAIVE-EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            ++    +  K   A  +F +  MV   + P++ T   LL  L     IESAL +F  M 
Sbjct: 356 TLIHGYCQVGKLRVALDIFCW--MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           +         + I+I GL    +V+ +  +   +   G++ +   YT +I  LC+     
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473

Query: 290 EA---IRLFK------MMRALD--LMPDELTYEELINCLCENLRLDDANDI-LEDMIVIG 337
           EA   IR  K       M A D  L     + +E+   L E      +N   ++ +I I 
Sbjct: 474 EADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIA 533

Query: 338 LTPTDDVFVDIVRGLCEVG-------------------------------KFDESVNFLE 366
            + +   FV     L E G                               KFD++ +   
Sbjct: 534 FSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFC 593

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENE 421
           +       P       +L       KF +   +  KM +  I+ D  S+ I I   C   
Sbjct: 594 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 653

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A  LLG+M+     P   T  + + G C+   +++A+ +   +     V + + Y+
Sbjct: 654 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 713

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC---------------VMR 526
            ++ GLC+   +  A+EVF CM K G    + ++N LI GL                V R
Sbjct: 714 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 773

Query: 527 KVD--------------------KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           K+D                    +A  L              TY  ++ G        D 
Sbjct: 774 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 833

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             +   M+ +GC  DV  Y  LI    +  +++D    F  M   GLV D  T  +L+HG
Sbjct: 834 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 893

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
                +L++     N++V      D   YNIL++ L   G   +A
Sbjct: 894 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 938



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 146/320 (45%), Gaps = 37/320 (11%)

Query: 66   LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
            +I  L    DL++AL++F +   +K  +  A TY  +I  L  +G   +   L ++MVK 
Sbjct: 715  VINGLCKNRDLNNALEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 773

Query: 126  RY-PNV---------------------------REALISLVFSF---VNHYRVNG----A 150
            +  PNV                           R +++  VF++   +N + ++G    A
Sbjct: 774  KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 833

Query: 151  MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
              +   M S G    V  +N ++    + KR   D + ++ EM   G+V +  T N L+ 
Sbjct: 834  KYMFDLMVSKGCFPDVVTYNTLITGFCKSKR-VEDGMKLFCEMTYQGLVGDAFTYNTLIH 892

Query: 211  VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
               +  ++  A   F RM   G  P+  T+ I++  L  N +++ ++ ++ ++    + +
Sbjct: 893  GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 952

Query: 271  ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
            ++  Y  II  LCR +KL+EA  LF+ +    + PD + Y  +I+ LC      +A+ + 
Sbjct: 953  DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 1012

Query: 331  EDMIVIGLTPTDDVFVDIVR 350
              M   G  P++ ++ + +R
Sbjct: 1013 RRMKEDGFMPSERIYDETLR 1032



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 86/213 (40%)

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           KL  G     +  +A  +F  M  +    S   F  L+     +R+ +  I         
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S+   ++T ++    +  R    L VL +M+  G    +  +  L+      N++ D 
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                +MVK+G  P+     +L+ GL    +L++    +N++       D   YN L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L   G  S A+ +L  M+ +   PD  T   L+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 204/477 (42%), Gaps = 5/477 (1%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A+ QF RM      P    F  ++           +VS+   +   GIQ +L     
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C   ++     +   +      PD +T   LI  LC   ++  A    + ++  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
                  +  ++ G+C++G    ++  L    G +T P    ++ +++  C       A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +  +M  + I AD  +++  I   C   ++++A  LL  MV+ ++ P+  TY+  V   
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           CK    ++A  V   +    +  D I+YS L++G   V ++ +A  VF  MS  G +   
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            ++ ILI G C  + VD+A+ L    +         TY+ ++ GL K  R   +  ++ +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   DV  Y  LI  + +   L      FN M    + P+  T   LL GL  G +
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           L         L++    L+   YN++ING  K+GL  +A  +L  M   G +P+A T
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/494 (21%), Positives = 205/494 (41%), Gaps = 66/494 (13%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +  + K  ++  V +   +   GI P++ TLN L+       +I        ++
Sbjct: 62  FNKILDSFAKMKH-YSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P++ T   +IKGL    +V  ++    ++   G QL    Y  +I  +C+    
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 180

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI+L + +      P+   Y  +I+ LC+   + +A  +  +M V G++     +  +
Sbjct: 181 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           + G C  GK  E++  L +      +P                              +  
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINP------------------------------NVY 270

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA--------------------- 447
           ++NI +  LC+  ++++A  +L  M+ + V PD  TYS                      
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 448 --------------FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
                          + G CK    ++AL +F+++  +++V   ++YS L++GLC+  +I
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
               ++   M   G      +++ LI GLC    +D+AI L +            T+T +
Sbjct: 391 PYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + GL K  R KD   V   +L +G  L+V  Y ++I    +Q  L++     + M   G 
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510

Query: 614 VPDRETMLSLLHGL 627
           +P+  T  +++  L
Sbjct: 511 IPNAFTFETIIIAL 524



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 187/443 (42%), Gaps = 32/443 (7%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VDD+VS    M  +     +  +  I+    +      A+ L   +    + PD +T   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LINC C   ++     +L  ++  G  P       +++GLC  G+  ++++F        
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF-------- 151

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
              H+ LL     A  F L +               S+   I  +C+  + R A +LL +
Sbjct: 152 ---HDKLL-----AQGFQLNQV--------------SYATLINGVCKIGDTRGAIKLLRK 189

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +      P+   YS  +   CK     +A  +F +++ + +  D ++YS L+ G C   K
Sbjct: 190 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA+ +   M     + +  ++NIL+  LC   KV +A  + ++   +       TY+ 
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL-FFNVMVKA 611
           +M G   +   K    V   M + G   DV  Y ILI     +NK+ D AL  F  M + 
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC-KNKMVDEALNLFKEMHQK 368

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +VP   T  SL+ GL    ++  V   I+++    +  D   Y+ LI+GL K G   +A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 672 SYLLDLMLGKGWVPDATTHGLLV 694
             L + M  +   P+  T  +L+
Sbjct: 429 IALFNKMKDQEIRPNIFTFTILL 451



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 9/272 (3%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I    + G ++E  GL   MV K   PNV    I LV +     +V  A  VL  
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI-LVDALCKEGKVKEAKSVLAV 294

Query: 157 MNSGGFKLSVDVFNVVLGA---IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           M     K  V  ++ ++     + E K+       V+  M   G+ P+V T   L+    
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKA----QHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +   ++ AL+ F+ MH+K   P   T+  +I GL  + R+     ++ EM D G   ++ 
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVI 410

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y+ +I  LC+   L+ AI LF  M+  ++ P+  T+  L++ LC+  RL DA ++ +D+
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +  G       +  ++ G C+ G  +E++  L
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 132/302 (43%), Gaps = 1/302 (0%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           + +  A     RM+     P    ++  +    K+ +Y  A+ +  ++  + +  D I+ 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+   C + +IT    V   + K G    + + N LI GLC+  +V KA+       +
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G      +Y  ++ G+ K+   +  + +L ++       +VE Y  +I ++ +   + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M   G+  D  T  +L++G     +L      +N++V  +   +   YNIL++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSFPDSVS 719
            L KEG   +A  +L +ML     PD  T+  L+ G  +  E+   +  F++ S      
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 720 DI 721
           D+
Sbjct: 338 DV 339



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 4/212 (1%)

Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           P+V    I L+  F  +  V+ A+ +   M+       +  ++ ++  +   K G   +V
Sbjct: 337 PDVHTYTI-LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC--KSGRIPYV 393

Query: 188 F-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           + +  EM   G   +V T + L++ L +   ++ A+  F +M  +   PN  TF I++ G
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    R+ D+  +  ++   G  L +  Y  +I   C++  LEEA+ +   M     +P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGL 338
             T+E +I  L +    D A  +L  MI  GL
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARGL 545


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 173/384 (45%), Gaps = 43/384 (11%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFE-----------------------------------TN 216
           EM  AGI P + T   L+  L E                                    N
Sbjct: 4   EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +++ A   F +M + GC P+  T+ +++  L    + +    I  EM   G   EL  Y 
Sbjct: 64  KLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYA 123

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++   C+  ++++A+ L + ++     P    Y  LI+ LC++ R ++A ++ E  +  
Sbjct: 124 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAA 181

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           G      V+   + GLC+ GK DE+    V  +E  C      +N ++   C   +   A
Sbjct: 182 GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEA 241

Query: 393 KCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV-VSSVVPDCATYSAFVL 450
           K ++++  +RK +       + +  LC++  + +A  +L RM+      P   TYSA + 
Sbjct: 242 KELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVID 301

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK    +DA  V +++     V D ++Y+ +++  C+V ++ EA E+F  M + GC+ 
Sbjct: 302 GLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCAS 361

Query: 511 SSSSFNILIYGLCVMRKVDKAIRL 534
              ++NILI G C   KVD+AI +
Sbjct: 362 DVVAYNILIRGYCRAAKVDEAIAM 385



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 177/425 (41%), Gaps = 33/425 (7%)

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +LGEM   GI   +  +  +I  LC  N   +A+++F  M  + + PD   Y  +I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA 378
           +  +LD A    E M+  G  P    +  +V  L +  K+++     E+      SP   
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
                                         ++   +   C+   I +A  L+ R+  +  
Sbjct: 121 ------------------------------TYATVVNGYCKAGRIDQALSLMRRLKGTGR 150

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
            P  + YS  + G CK   +E+A  +F   +    V D I Y+  + GLC+  K+ EA  
Sbjct: 151 SPSGSLYSTLIDGLCKHDRHEEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKA 208

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           V   M + GC+    S+N++IY LC   +V +A  L   A            T ++ GL 
Sbjct: 209 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 268

Query: 559 KLQRAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
           K +R ++  V+L +ML  G  A  V  Y  +I  + + ++L D  +    M +AG VPD 
Sbjct: 269 KSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDV 328

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
            T  +++       +L        ++       D   YNILI G  +     +A  +++ 
Sbjct: 329 VTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEE 388

Query: 678 MLGKG 682
           M G+G
Sbjct: 389 MAGRG 393



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 175/399 (43%), Gaps = 38/399 (9%)

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
           +L +M   G+TPT   F  ++R LCE+       NF            N  L+       
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCEL-------NFT-----------NKALQ------- 35

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                 I  +M D K+  D   + + I  LC+  ++  A     +MV S  +PD  TY+ 
Sbjct: 36  ------IFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTV 89

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            V    K C +E   ++F ++ ++    + ++Y+ +V G C+  +I +A+ +   +   G
Sbjct: 90  LVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG 149

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            S S S ++ LI GLC   + ++A  L  +A  +G       YT  + GL K  +  +  
Sbjct: 150 RSPSGSLYSTLIDGLCKHDRHEEARELFEMA--AGDVQDVIVYTSFISGLCKAGKLDEAK 207

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            V  +M+  GCA D  +Y ++I S+ + N++ +     +  ++   +P       L+ GL
Sbjct: 208 AVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGL 267

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
               ++      + +++   +   S + Y+ +I+GL K      A  +L  M   G VPD
Sbjct: 268 CKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPD 327

Query: 687 ATTHGLLVGS--SVGEEIDSRRFAFDSSSFPDSVSDILA 723
             T+  ++ +   VG  +D  R  F         SD++A
Sbjct: 328 VVTYTAIIDAFCKVG-RLDEARELFQRMHERGCASDVVA 365



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 3/157 (1%)

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNV 171
           E  E + Q M ++  P V    + LV       RV  A  +L  M  +G    SV  ++ 
Sbjct: 240 EAKELMDQAMERKCMPGVPVCTV-LVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 172 VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
           V+  + +  R   D   V ++M +AG VP+V T   +++   +  R++ A + F+RMH++
Sbjct: 299 VIDGLCKADR-LDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHER 357

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           GC  +   + I+I+G    ++VD++++++ EM   GI
Sbjct: 358 GCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 238/543 (43%), Gaps = 34/543 (6%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-------EKRGFADFVF 188
           SLV ++        A ++L  M   G++    V+N+++G I         E  G A+   
Sbjct: 16  SLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERA- 74

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            Y EM++ G+V N   +      L    + E A +  R M  KG  P+S T+  VI  L 
Sbjct: 75  -YNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLC 133

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             S+V+ +  +  EM   GI  ++  YT ++   C+   +E+A   F  M+     P+ +
Sbjct: 134 NASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVV 193

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLED 367
           TY  LI+   +  +L  AN+I E M+  G  P    +  ++ G C+ G+ +++   +   
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD--SWNIPIRWLCENEEIRK 425
           K   V  P         +   +F       ++ D ++ + +  ++   +  LC+  ++++
Sbjct: 254 KNDKVDIP---------DVDIYF-------RIVDSELKEPNVVTYGALVDGLCKAHKVKE 297

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A +LL  M +    P+   Y A + G CK+   ++A  VF ++       +  +YS L++
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
            L + +++  A++V   M +N C+ +   +  ++ GLC + K D+A RL  +    G   
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TYT ++ G  K  R    L +L  M  +GCA +   Y +LI        L D     
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS--GINKLVSDSEVLDSSMYNILINGLW 663
             M K    P     + +   + +G     V+S   + +L  D  V    +Y +LI+   
Sbjct: 478 EEM-KQTYWPKH---IGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFI 533

Query: 664 KEG 666
           K G
Sbjct: 534 KAG 536



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 185/431 (42%), Gaps = 38/431 (8%)

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
           MM      P  + +  L++  C +     A  +L+ M++ G  P   V+  ++ G+C   
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICST- 59

Query: 357 KFDESVNFLEDKCGYVTSPHNALLE---------------CCCNAGKFFLAKCILEKMAD 401
              E +  +E   G     +N +LE               C C  GKF  A  ++ +M  
Sbjct: 60  ---EDLPSME-VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMS 115

Query: 402 RK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           +  I D  +++  I +LC   ++ KA++L   M  + + PD  TY+  +   CK+   E 
Sbjct: 116 KGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQ 175

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A   F ++       + ++Y+ L+    +  K++ A E+F  M  NGC  +  ++  LI 
Sbjct: 176 ARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALID 235

Query: 521 GLCVMRKVDKAIRLRS-----------------LAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           G C   + +KA ++ +                 +  S        TY  ++ GL K  + 
Sbjct: 236 GHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKV 295

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           K+   +L  M +EGC  +   Y  LI    +  KL +    F  M+  G  P+  T  SL
Sbjct: 296 KEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSL 355

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGW 683
           +  L    +L L    + K++ +S   +  +Y  +++GL K G T +A  L+ +M  KG 
Sbjct: 356 IDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGC 415

Query: 684 VPDATTHGLLV 694
            P+  T+  ++
Sbjct: 416 YPNVVTYTAMI 426



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 46/308 (14%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLV 155
           D +CK+       G ++E + +   M+     PNV     SL+       R++ A++VL 
Sbjct: 322 DGFCKV-------GKLDEAQEVFTKMLGHGCSPNVY-TYSSLIDKLFKDKRLDLALKVLT 373

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFE 214
            M       +V ++  ++  +   K G  D  +    M++  G  PNV T   +++   +
Sbjct: 374 KMLENSCAPNVVIYTEMVDGLC--KVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGK 431

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM----------- 263
             R++  L+  + M  KGC PN  T+ ++I    A   +DD+  +L EM           
Sbjct: 432 AGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGM 491

Query: 264 -------------FDLGIQLELS---------FYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                          LG+  ELS          Y  +I    +  +LE A+ L + + + 
Sbjct: 492 YRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSF 551

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
                  TY  LI  L    ++D A  +  DM   G  P   + V +++GL  VGK++E+
Sbjct: 552 SAAYQN-TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610

Query: 362 VNFLEDKC 369
           +   +  C
Sbjct: 611 LQLSDSIC 618



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 14/211 (6%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNG----AMR 152
           TY  MI   G AG V+    L Q M  K   PN     +      +NH    G    A +
Sbjct: 421 TYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV-----LINHCCAAGLLDDAHK 475

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           +L  M    +   + ++  V+     E   F   + +  E+ + G VP +     L++  
Sbjct: 476 LLEEMKQTYWPKHIGMYRKVIEGFSHE---FVASLGLLAELSEDGSVPILPVYKLLIDNF 532

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +  R+E AL+    +          T+  +I+ L    +VD +  +  +M   G   EL
Sbjct: 533 IKAGRLEMALELHEELSSFSA-AYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPEL 591

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           S   C+I  L R  K EEA++L   +  +D+
Sbjct: 592 SMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 247/558 (44%), Gaps = 49/558 (8%)

Query: 48  TDYEAKIQSLRHNLSPDHLI--RVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK 105
           +D E  I+ L+  L  DH +  +VLD   ++ + ++ FKW   ++ FQH + TY  +I  
Sbjct: 76  SDAEKAIEVLK--LKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIRC 133

Query: 106 LGLAGNVEEMEGLCQNMVKERYP-NVREALISLVFSFVNHYR-VNGAMRVLVNMNSGGFK 163
           L  +G V+EM    Q+M+  R P +V  A  S +   +   + VN A+ V   +      
Sbjct: 134 LEESGLVDEMWRTIQDMI--RSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCN 191

Query: 164 LSVDVFNVVLGAIVEE----------------------------------KRGFADFVF- 188
            +  V+N ++  ++ E                                  K    DF F 
Sbjct: 192 PTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFR 251

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EM + G+ P       +L + F+ N++E+AL     M  KGC P   T+  +IKGL 
Sbjct: 252 LFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLG 311

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              RVDD+ S+   M   G + ++     +I +L R  +LE+A++LF  M +L   P+ +
Sbjct: 312 KVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVV 371

Query: 309 TYEELINCLCEN-LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE- 366
           TY  +I  + E+     +A    E M   G+ P+   +  ++ G C+  + ++++  LE 
Sbjct: 372 TYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEE 431

Query: 367 -DKCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEE 422
            D+ G+   P  + +L++    A ++  A  + +++ +    +    + + I+       
Sbjct: 432 MDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A +L   M      PD  TY+A + G  +    ++A  + R +       D  S++ 
Sbjct: 492 LSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNI 551

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           ++ GL +      A+E+F  M ++     + S+N ++  L      + A +L       G
Sbjct: 552 ILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG 611

Query: 543 TSYTTSTYTKIMLGLVKL 560
             Y + TY+ I+  + K+
Sbjct: 612 FEYDSITYSSILEAVGKV 629



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 110/530 (20%), Positives = 214/530 (40%), Gaps = 51/530 (9%)

Query: 203 DTLNY--LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           D+  Y  L+  L E+  ++      + M +  C      +  ++K L     V+ ++S+ 
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCE 319
            ++         + Y  +I ML  E   E+   L+ ++    +  PD +TY  LI+   +
Sbjct: 183 YQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGK 242

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
             R D A  + ++M   GL PT+ ++  I+    ++ K + ++  +E+  G   +P    
Sbjct: 243 LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAP---- 298

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                                        ++   I+ L +   +  AY L   M+     
Sbjct: 299 --------------------------TVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCK 332

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE-KITEAVE 498
           PD    +  +    +    EDAL++F ++ +     + ++Y+ +++ + + +   +EA  
Sbjct: 333 PDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAAL 392

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM--LG 556
            F  M  NG + SS ++ ILI G C   +V+KA+ L       G     + Y  ++  LG
Sbjct: 393 WFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLG 452

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALD-VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
             K   A + L    Q L E C       Y ++I+      +L D    F  M K G  P
Sbjct: 453 RAKRYEAANELF---QELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSP 509

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  +L+ G+     +    S +  +  +    D   +NI++NGL K G   +A  + 
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMF 569

Query: 676 DLMLGKGWVPDATTHGLL-----------VGSSVGEEIDSRRFAFDSSSF 714
             M     +PDA ++  +           + + +  E+  + F +DS ++
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITY 619



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/520 (19%), Positives = 219/520 (42%), Gaps = 43/520 (8%)

Query: 179 EKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           E+ G  D ++   ++M+++         + +L++L +   +  AL  F ++  + C P +
Sbjct: 135 EESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTA 194

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCIIPMLCRENKLEEAIRLFK 296
             +  +I  L+     +    +  E+   G    +   Y+ +I    +  + + A RLF 
Sbjct: 195 TVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFD 254

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M+   L P E  Y  ++    +  +++ A  ++E+M   G  PT   + ++++GL +VG
Sbjct: 255 EMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVG 314

Query: 357 KFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWN 411
           + D++     N L+D C       N L+     AG+   A  +  KM   + A +  ++N
Sbjct: 315 RVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYN 374

Query: 412 IPIRWLCENE-EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
             I+ + E++    +A     +M  + + P   TY+  + G CK    E AL +  ++  
Sbjct: 375 TVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDE 434

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           +       +Y  L++ L + ++   A E+F  + +N    S+  + ++I       ++  
Sbjct: 435 KGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSD 494

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ L       G S    TY  +M G+++     +   ++  M   GC  D++++ I++ 
Sbjct: 495 AVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILN 554

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
            +++    K     F  M ++ ++PD                                  
Sbjct: 555 GLAKTGGPKRAIEMFTKMKESEIMPD---------------------------------- 580

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +  YN +++ L + G+   A+ L+  M  KG+  D+ T+
Sbjct: 581 -AVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITY 619


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 216/516 (41%), Gaps = 27/516 (5%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRI--ESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           ++ +M  +G  PNV + + L+      +R+    A +    M  KG  PN+ T+   + G
Sbjct: 196 LFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYG 255

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L    +V  + + L  +   G       +  +I   CRE +++EAI +F  M+   L+PD
Sbjct: 256 LSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPD 315

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD------- 359
             +Y  L++ LC+   +    D+L +M   G+ PT   +  ++ GLC  GK +       
Sbjct: 316 THSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFR 375

Query: 360 --ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRW 416
             E   F  D   Y     + +L  CC      +   +   M     + D  ++   I  
Sbjct: 376 RLEEQGFKHDHIVY-----SIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYA 430

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
            C +  +  A  +   M+ S V P+  T +  V G  K    ++A     +V    +V +
Sbjct: 431 FCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPN 490

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
              Y  ++ GLC+V K      +F  M K G    +  ++I+I       K+ +A RL  
Sbjct: 491 LCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFH 550

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                GT     TYT ++ GL    R  +++ +   M+ EG   D   Y  LI    +++
Sbjct: 551 KMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRS 610

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLA-----DGSQLHLVSSGINKLVSDSEVLD 651
            +K     F  M K GL  D      L+ G +     DG+Q  L+    NK ++ S V  
Sbjct: 611 NMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQC-LMEEMTNKGLTPSVV-- 667

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
              Y  LI G +K G   +A+   + ML  G  PDA
Sbjct: 668 --TYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 235/554 (42%), Gaps = 18/554 (3%)

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
           GG    + V+  ++   VE    F D +  Y E  K G+   +   N+LL+ L E N+I 
Sbjct: 135 GGSMTLLQVYATIIRIFVELSM-FEDALLTYTEAKKVGV--ELQLCNFLLKCLVERNQII 191

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR--VDDSVSILGEMFDLGIQLELSFYTC 277
            A   F  M   G  PN  ++ +++       R  + ++  +L EM   G++   + Y  
Sbjct: 192 YARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGT 251

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
            +  L R  ++  A    +M+       +   +  +I   C   ++ +A ++ + M   G
Sbjct: 252 YLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGG 311

Query: 338 LTPTDDVFVDIVRGLCEVGK----FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
           L P    +  +V GLC+ G     +D  V    +        +++LL   C AGK  LA 
Sbjct: 312 LVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAF 371

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +  ++ ++    D   ++I +   C++  I    +L   MV  + VPD   Y++ +   
Sbjct: 372 ELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAF 431

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+  N  DAL VF  +    +  + ++ + LV+G  +   I EA      + + G   + 
Sbjct: 432 CRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNL 491

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
             + ++I GLC + K D    + +     G    T  Y+ I+   VK  +  +   +  +
Sbjct: 492 CMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHK 551

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML EG   +V  Y  LI  +   ++L +    F  M+  GL PDR    SL+      S 
Sbjct: 552 MLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSN 611

Query: 633 LHL---VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           +     +  G+ KL   +   D+ +Y  LI G  K      A  L++ M  KG  P   T
Sbjct: 612 MKAALEIFRGMGKLGLSA---DAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVT 668

Query: 690 H-GLLVGS-SVGEE 701
           +  L++G   +G+E
Sbjct: 669 YTNLIIGYFKIGDE 682



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 105/491 (21%), Positives = 201/491 (40%), Gaps = 15/491 (3%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A  +L  M   G K +   +   L  +   ++  + + F+ + + + G   N    N ++
Sbjct: 230 AFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFL-QMLCQRGNPCNTYCFNAVI 288

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
           +      +++ A++ F  M K G  P++ ++ I++ GL     V     +L EM   GI 
Sbjct: 289 QGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIA 348

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             L  Y+ ++  LCR  K+E A  LF+ +       D + Y  ++N  C++L ++   D+
Sbjct: 349 PTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDL 408

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
             DM+     P    +  ++   C      +++   E       SP+  ++ C      F
Sbjct: 409 WNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPN--VVTCTILVDGF 466

Query: 390 FLAKCI------LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
              + I      L K+    I  +   + + I  LC+  +    + +   M+    VPD 
Sbjct: 467 GKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDT 526

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
             YS  +    K     +A R+F ++  +    +  +Y+ L+ GLC  +++ E V +F  
Sbjct: 527 VVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKH 586

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M   G +     +  LI   C    +  A+ +       G S     YT ++ G  K+  
Sbjct: 587 MIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLA 646

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
                 ++ +M  +G    V  Y  LI    +    +   + +N M++AG+ PD +  LS
Sbjct: 647 MDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAK--LS 704

Query: 623 LLHGL---ADG 630
            + G    ADG
Sbjct: 705 CILGFGNDADG 715



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 150/325 (46%), Gaps = 7/325 (2%)

Query: 48  TDYEAKIQSLRHNLSP-----DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKM 102
           T Y+  ++  R+ ++P       L+  L     +  A ++F+ +  ++ F+H    Y  +
Sbjct: 334 TGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLE-EQGFKHDHIVYSII 392

Query: 103 ILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
           +       N+E +  L  +MV   +        SL+++F  H  +  A+ V   M   G 
Sbjct: 393 LNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGV 452

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
             +V    +++    +E+     F+F++K + + GIVPN+     ++  L + N+ +   
Sbjct: 453 SPNVVTCTILVDGFGKERMIDEAFLFLHK-VRQFGIVPNLCMYRVIINGLCKVNKSDHVW 511

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
             F  M K+G  P++  + I+I   +   ++ ++  +  +M D G +  +  YT +I  L
Sbjct: 512 GIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGL 571

Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
           C +++L E + LFK M    L PD + Y  LI C C+   +  A +I   M  +GL+   
Sbjct: 572 CHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADA 631

Query: 343 DVFVDIVRGLCEVGKFDESVNFLED 367
            ++  ++ G  +V   D +   +E+
Sbjct: 632 FLYTCLIGGFSKVLAMDGAQCLMEE 656



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/372 (20%), Positives = 148/372 (39%), Gaps = 40/372 (10%)

Query: 343 DVFVDIVRGLCEVGKFDESV-NFLE-DKCGYVTSPHNALLECCCNAGKFFLAKCILEKM- 399
            V+  I+R   E+  F++++  + E  K G      N LL+C     +   A+ + + M 
Sbjct: 142 QVYATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMK 201

Query: 400 ADRKIADCDSWNIPIRWLCENEEIR--KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           +     +  S+++ +      + +   +A+ELL  M +  V P+ ATY  ++ G  +   
Sbjct: 202 SSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQ 261

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
              A    + +  +    ++  ++ +++G C+  ++ EA+EVF  M K G    + S++I
Sbjct: 262 VASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSI 321

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L+ GLC    V     L      +G + T  +Y+ ++ GL +  + +    +  ++  +G
Sbjct: 322 LVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              D   Y I++    +   ++     +N MV    VPD     SL++       L    
Sbjct: 382 FKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNL---- 437

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
                                          + A  + +LML  G  P+  T  +LV   
Sbjct: 438 -------------------------------TDALGVFELMLDSGVSPNVVTCTILVDGF 466

Query: 698 VGEEIDSRRFAF 709
             E +    F F
Sbjct: 467 GKERMIDEAFLF 478


>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
 gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
          Length = 475

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 183/378 (48%), Gaps = 7/378 (1%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           SP  + +++ + +D   A +IF + S Q  FQH+  +Y  +ILKLG A     ++ L  +
Sbjct: 66  SPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLLTD 125

Query: 122 MVKERYPNVREALISLVFSFVNHYRV-NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           +  + YP V   L S + +      + + A+++   +       S    N +L  +V  +
Sbjct: 126 LKSKNYP-VTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQ 184

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
                   ++K+     + PN  + N L+       +I  A   F +M K+   P+  ++
Sbjct: 185 NYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESY 244

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I+++ L   S+V+ +V +L +M + G   +   YT ++  LCR+ KL EA +L   M+ 
Sbjct: 245 RILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKV 304

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
               PD + Y  +I   C   R  DA  +LEDM   G  P    +  +V GLC+ G FDE
Sbjct: 305 KGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDE 364

Query: 361 SVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIR 415
           + + LE+      SPH    NAL++  CN GK   A  ++E++    +    ++W + + 
Sbjct: 365 AKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVS 424

Query: 416 WLCENEEIRKAYELLGRM 433
            +CE +++++  E+L ++
Sbjct: 425 RICEVDDLQRIGEILDKV 442



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 131/309 (42%), Gaps = 37/309 (11%)

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
           ++  +N ++ A  LFK     D+ P+  +Y  LI   C N ++  A  +   M    + P
Sbjct: 180 LVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMP 239

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
             + +  +++ LC   + + +V+ LED    GYV                          
Sbjct: 240 DVESYRILMQALCRKSQVNGAVDLLEDMLNKGYV-------------------------- 273

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
                  D  S+   +  LC  +++R+AY+LL RM V    PD   Y+  +LG C+    
Sbjct: 274 ------PDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRA 327

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            DA +V   + +   + + +SY  LV GLC      EA      M   G S   +  N L
Sbjct: 328 MDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNAL 387

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLV 575
           I G C + K+++A  +       G +  T T+  ++  + +   LQR  ++L  + ++ +
Sbjct: 388 IKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKVEL 447

Query: 576 EGCALDVEA 584
           +G    VEA
Sbjct: 448 KGDTRIVEA 456



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 107/240 (44%)

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             +  S+NI IR  C N +I  AY L  +M    V+PD  +Y   +   C+      A+ 
Sbjct: 203 FPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVD 262

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +   +  +  V D++SY+ L+  LC+ +K+ EA ++ C M   GC+     +N +I G C
Sbjct: 263 LLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFC 322

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
              +   A ++     S+G      +Y  ++ GL       +    L +M+++G +    
Sbjct: 323 REGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFA 382

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
               LI+      K+++       ++K G  P  ET + ++  + +   L  +   ++K+
Sbjct: 383 VSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKV 442



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 101/238 (42%)

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I+ A++L        V P+  +Y+  +   C       A  +F Q+  + ++ D  SY  
Sbjct: 187 IKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRI 246

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++ LC+  ++  AV++   M   G    + S+  L+  LC  +K+ +A +L       G
Sbjct: 247 LMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKG 306

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +     Y  ++LG  +  RA D   VL  M   GC  ++ +Y  L+  + +Q    +  
Sbjct: 307 CNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAK 366

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
                M+  G  P      +L+ G  +  ++      + +L+   E   +  + ++++
Sbjct: 367 SHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVS 424



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 2/253 (0%)

Query: 457 NY-EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           NY + A  +F+      +  ++ SY+ L+   C   +I+ A  +F  M K        S+
Sbjct: 185 NYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESY 244

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            IL+  LC   +V+ A+ L     + G      +YT ++  L + ++ ++   +L +M V
Sbjct: 245 RILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKV 304

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +GC  D+  Y  +I     + +  D       M   G +P+  +  +L+ GL D      
Sbjct: 305 KGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDE 364

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
             S + +++        ++ N LI G    G   +A  +++ +L  G  P   T  ++V 
Sbjct: 365 AKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMV- 423

Query: 696 SSVGEEIDSRRFA 708
           S + E  D +R  
Sbjct: 424 SRICEVDDLQRIG 436



 Score = 43.1 bits (100), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%)

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +S QN +K     F       + P+ ++   L+       Q+ +  S  N++     + D
Sbjct: 181 VSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPD 240

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              Y IL+  L ++   + A  LL+ ML KG+VPDA ++  L+ S
Sbjct: 241 VESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNS 285



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 56/286 (19%), Positives = 110/286 (38%), Gaps = 41/286 (14%)

Query: 60  NLSPDHLIRVLD----NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEM 115
           N SP HL  +L+    + N +  A  +FK       F +T  +Y  +I    L G +   
Sbjct: 167 NPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPNTK-SYNILIRAFCLNGQISMA 225

Query: 116 EGLCQNMVK-ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
             L   M K +  P+V    I L+ +     +VNGA+ +L +M + G+      +  +L 
Sbjct: 226 YSLFNQMFKRDVMPDVESYRI-LMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLN 284

Query: 175 AIVEEKR----------------------------GF------ADFVFVYKEMVKAGIVP 200
           ++  +K+                            GF       D   V ++M   G +P
Sbjct: 285 SLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMP 344

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N+ +   L+  L +    + A      M  KG  P+      +IKG     +++++  ++
Sbjct: 345 NLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVV 404

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
            E+   G       +  ++  +C  + L+    +   ++ ++L  D
Sbjct: 405 EELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKVELKGD 450


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 135/602 (22%), Positives = 260/602 (43%), Gaps = 6/602 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY   I+       VEE   L + MV+         L +LV       R + A  +   M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           +  G   +   +  ++ ++ +  RG  + + +  EMV  G+V ++ T   L++ L +  +
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            +   D  R        PN  T+ ++I  L     VD++  +L EM +  I   +  ++ 
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I    +   L++A    +MM+   + P+ +TY  LI+   +    D A ++  DM+  G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----PHNALLECCCNAGKFFLAK 393
           +     +   +V GL + GK +E++   +D  G   S     +  L++    AG    A 
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 394 CILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
              +++ DR  + D   +N+ I  LC   + ++A   L  M    + PD +TY+  ++  
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH 599

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+      AL++  ++   S+  + I+Y+ LV GL     + +A  +   M   G S SS
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +   ++      R++D  + +     ++G     + Y  ++  L      +   VVL +
Sbjct: 660 LTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           ML  G A D   +  LI    + + L +    +  M+   + P+  T  +LL GL    +
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           +    + + ++       ++  Y+IL  G  K+    +A  L   M+GKG+VP  +T+  
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 693 LV 694
           L+
Sbjct: 840 LI 841



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 131/567 (23%), Positives = 242/567 (42%), Gaps = 49/567 (8%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  LG  G  +E++   +  + +           L+ +    + V+ A +VL+ M
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETN 216
                  +V  F+ V+   V  KRG  D    YK M+K  GI PNV T   L++  F+  
Sbjct: 406 EEKSISPNVVTFSSVINGFV--KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             ++AL+ +  M  +G   N    + ++ GL  N ++++++++  +    G+ L+   YT
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  L +   +  A +  + +   +++PD + Y   INCLC   +  +A   L +M  +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLED---------------------------KC 369
           GL P    +  ++   C  G+  +++  L +                           K 
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643

Query: 370 GYVT--------SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            Y+         SP    H  +L+ C  + +  +   I E M +  + AD   +N  ++ 
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC +   RKA  +L  M+ S + PD  T++A +LG CK  + ++A   + Q+  Q++  +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +++ L+ GL  V +I EA  V   M K+G   ++ +++IL  G        +A+RL  
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 537 LAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                G     STY  ++    K   + +AK+L      M   G       Y IL+   S
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL---FKDMQKRGVHPTSCTYDILVSGWS 880

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETM 620
                 +       M + G  P + T+
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTL 907



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 132/600 (22%), Positives = 256/600 (42%), Gaps = 43/600 (7%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV  F    +V+ A  VL  M   G   +V  +   +      K G  +   +Y+ MV+
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK-GVEEAFDLYEGMVR 267

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G++ +V TL+ L+  L    R   A   FR M K G  PN  T+  +I  L    R  +
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +S+LGEM   G+ ++L  YT ++  L ++ K +E     +   + +L P+ +TY  LI+
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----------- 364
            LC+   +D+A  +L +M    ++P    F  ++ G  + G  D++  +           
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 365 --------------LEDKCGYVTSPHNALLECCCNAGKFFLAKC---------ILEKMAD 401
                          + +   +   H+ L E      KF +            I E MA 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV-KVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 402 RKIA-------DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
            K A       D  ++   I  L +  ++  A++    ++  +++PD   Y+ F+   C 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
           L  +++A     ++    L  D  +Y+ ++   C+  +  +A+++   M  +    +  +
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N L+ GL     V+KA  L +   S+G S ++ T+ +++    + +R   +L +   M+
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
             G   D+  Y  L+Q +      +   +    M+ +G+ PD  T  +L+ G    S L 
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +   +++  +   + + +N L+ GL   G   +A  +L  M   G  P+  T+ +L 
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 220/535 (41%), Gaps = 51/535 (9%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL---DQ 224
            +N++L A+ +     A    V  EM K G+  +  T+N LL  L    ++++A    D+
Sbjct: 105 AYNILLAALSDHAHAPA----VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR 160

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              +H          +  +I G         ++S+   M   G+ +++  Y  ++   CR
Sbjct: 161 GGGIHALDVI----GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
             +++ A  +  MM+   + P+  TY   I   C    +++A D+ E M+  G+      
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 345 FVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
              +V GLC  G+F E+       DK G   +P++             +  C L      
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVG--AAPNH-------------VTYCTL------ 315

Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV--LGK-CKLCNYE 459
                      I  L +    ++   LLG MV   VV D  TY+A +  LGK  K    +
Sbjct: 316 -----------IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           D LR      + +L  + ++Y+ L++ LC+   + EA +V   M +   S +  +F+ +I
Sbjct: 365 DTLRF---ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G      +DKA   + +    G +    TY  ++ G  K Q     L V   ML EG  
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           ++      L+  + +  K+++    F     +GL  D     +L+ GL     +      
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             +L+  + + D+ +YN+ IN L   G   +A   L  M   G  PD +T+  ++
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 121/557 (21%), Positives = 227/557 (40%), Gaps = 41/557 (7%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           V   M   G+  +V   N L+       ++++A      M + G  PN  T+   I    
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
               V+++  +   M   G+ L++   + ++  LCR+ +  EA  LF+ M  +   P+ +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           TY  LI+ L +  R  +   +L +M+  G+      +  ++  L + GK DE  + L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
                SP    +  L++  C A     A+ +L +M ++ I+ +  +++  I    +   +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA E    M    + P+  TY   + G  K    + AL V+  +  + + ++      L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG---------------------- 521
           V GL Q  KI EA+ +F   S +G SL   ++  LI G                      
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 522 -------------LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
                        LC++ K  +A    +   + G     STY  +++   +       L 
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L +M +     ++  Y  L+  +     ++      N MV AG  P   T   +L   +
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDAT 688
              +L ++      +++     D ++YN L+  L   G+T +A+ +L+ MLG G  PD  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 689 T-HGLLVGSSVGEEIDS 704
           T + L++G      +D+
Sbjct: 731 TFNALILGHCKSSHLDN 747



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 124/289 (42%), Gaps = 1/289 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  ++  L   G VE+ + L   MV   +         ++ +     R++  + +   M
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G    + V+N +L  +          V V +EM+ +GI P+  T N L+    +++ 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATV-VLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +++A   + +M  +   PN  TF  ++ GL +  R+ ++ ++L EM   G++     Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +     +++   EA+RL+  M     +P   TY  LI+   +   +  A ++ +DM   G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
           + PT   +  +V G   +    E    L+D      SP    L   C A
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913


>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 212/471 (45%), Gaps = 44/471 (9%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M + G+  +V+ FN+++ A+  E +   + ++V   M+K  I PNV   N +++   +  
Sbjct: 205 MIASGYSENVNTFNLIIYALCNECK-LLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKMG 263

Query: 217 RIESALDQFRRMH---KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
            ++ AL   R +         PN   +  +I G     R++ + ++LGEM  LGI     
Sbjct: 264 EMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNER 323

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I    R+  L+ A RL   M  + L+PD   Y  LI  L     L++A+ +L DM
Sbjct: 324 TYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDM 383

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
           I   + P +  +  + +GLC  G  ++++                            +  
Sbjct: 384 INRRILPDEFTYSILTKGLCVSGHLNKALR---------------------------VHY 416

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            I+E+   R   D  ++NI I ++ ++  I  A +LL  M+V  + PD  TY   V G C
Sbjct: 417 YIVERSLVR---DAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHC 473

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           K    E A++++ +         ++ Y+ +++GLC+   I  A  +   + +NG  L   
Sbjct: 474 KEGKIEAAVQIYDK---------AVVYNSILDGLCKQGSIYAAKLLVDKLQQNGF-LDPV 523

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++N L++G CV  +++KA  L     + G+     +Y  ++  L K+   +  + ++  M
Sbjct: 524 TYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAM 583

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
             +G   D+  Y  LI +  E    +D       M+  G VPDR+T  S +
Sbjct: 584 SSQGIIPDLITYTTLITNFVETCGSEDVIELHGYMMLKGAVPDRKTYRSFV 634



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 139/369 (37%), Gaps = 76/369 (20%)

Query: 192 EMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           E++  G V PN+   N ++    +  R+ESA +    M K G   N RT+  +I G    
Sbjct: 276 EVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARK 335

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
             +D +  +  EM ++ +  +   Y  +I  L  E +LEEA  L   M    ++PDE TY
Sbjct: 336 GSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTY 395

Query: 311 EELINCLCENLRLDDA-----------------------------------NDILEDMIV 335
             L   LC +  L+ A                                     +L  MIV
Sbjct: 396 SILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIV 455

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
            G+ P    +   V G C+ GK + +V   +    Y     N++L+  C  G  + AK +
Sbjct: 456 GGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKAVVY-----NSILDGLCKQGSIYAAKLL 510

Query: 396 LEKMADRKIAD-----------------------------------CDSWNIPIRWLCEN 420
           ++K+      D                                     S+NI I +LC+ 
Sbjct: 511 VDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKM 570

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
             I++A EL+  M    ++PD  TY+  +    + C  ED + +   +  +  V D  +Y
Sbjct: 571 GLIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSEDVIELHGYMMLKGAVPDRKTY 630

Query: 481 SKLVEGLCQ 489
              V    Q
Sbjct: 631 RSFVSPCLQ 639



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 101/506 (19%), Positives = 194/506 (38%), Gaps = 87/506 (17%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +E A D  R++  +G       +   +  L+     D   ++  EM   G    ++ +  
Sbjct: 160 VEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNL 219

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           II  LC E KL EAI +  +M  +++ P+ + +         N+ +D AN + E  + + 
Sbjct: 220 IIYALCNECKLLEAIYVVYLMLKIEIWPNVVXF---------NMIIDKANKMGEMDLALK 270

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
           LT   +V                         G   SP+     C  N            
Sbjct: 271 LTRNIEVI-----------------------SGGSVSPNIVAYNCIING----------- 296

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                               C+   +  A  +LG M+   +  +  TY+  + G  +  +
Sbjct: 297 -------------------FCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGS 337

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            + A R+  ++    L+ D+  Y+ L+  L    ++ EA  +   M          +++I
Sbjct: 338 LDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSI 397

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L  GLCV   ++KA+R+              TY  ++  + + +       +L+ M+V G
Sbjct: 398 LTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGG 457

Query: 578 CALDVEAYCILIQSMSEQNKLK------DCALFFNVMV----------KAGLVPDR---- 617
              D+  Y   +    ++ K++      D A+ +N ++           A L+ D+    
Sbjct: 458 IKPDMVTYGTPVDGHCKEGKIEAAVQIYDKAVVYNSILDGLCKQGSIYAAKLLVDKLQQN 517

Query: 618 -----ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
                 T  +LLHG     ++    +   ++++   +++   YNI+IN L K GL  QA 
Sbjct: 518 GFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAM 577

Query: 673 YLLDLMLGKGWVPDATTHGLLVGSSV 698
            L+  M  +G +PD  T+  L+ + V
Sbjct: 578 ELMRAMSSQGIIPDLITYTTLITNFV 603


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 218/500 (43%), Gaps = 27/500 (5%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV+ G   NV T   L+  L    R+  AL    RM ++G  P++ T+  ++ G+     
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
              ++++L +M +  I+  +  Y+ I+  LC++    +A  +F  M    + P+ LTY  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF----LEDK 368
           +I+  C   +  DA  +L DMI   + P    F  ++    + GK   +       L   
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD------------CDSWNIPIRW 416
               T  ++++++  C   +   AK + + M  +  +             C +    I  
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
            C+   +  A +L   M+ + V PD  T +  + G C+    E AL +F+      + LD
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           + + + ++ G+C+  K+ EA ++F  +  NG      ++NILI    V  K    +R   
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIG---VFVKEGNFLRAED 357

Query: 537 LAYS---SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +       G   +T TY  ++ G  K  R ++   ++  M+ EGC+ DV  +  LI+   
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYC 417

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           +  ++ D    F+ M + GLV D  T  +L+HG      L+       ++VS     D+ 
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTI 477

Query: 654 MYNILINGL-----WKEGLT 668
            +  ++ GL      ++GLT
Sbjct: 478 TFRSMLAGLCTKAELQKGLT 497



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 202/445 (45%), Gaps = 21/445 (4%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M ++ I  NV   + +++ L +      A + F  MH+KG  PN  T+  +I G  + 
Sbjct: 69  RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSY 128

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            +  D+  +L +M +  I  ++  ++ +I    +E K+  A  L++ M   ++ P  +TY
Sbjct: 129 GKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITY 188

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             +I+  C++ RL+DA  + + M+  G +P      DI+           ++N L D C 
Sbjct: 189 SSMIDGFCKHSRLEDAKHMFDLMVSKGCSP------DII-----------TLNTLIDGC- 230

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL 429
                   L+   C  G   +A+ + ++M    ++ D  + N  +  LCEN ++ KA E+
Sbjct: 231 --CRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEM 288

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
                 S +  D AT +  + G CK    ++A  +F  +    +  D ++Y+ L+    +
Sbjct: 289 FKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVK 348

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
                 A +++  M   G   S+ ++N ++ G C   ++++A ++     S G S    T
Sbjct: 349 EGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVT 408

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           ++ ++ G  K  R  D L + ++M   G   D   Y  LI    +   L      F  MV
Sbjct: 409 FSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMV 468

Query: 610 KAGLVPDRETMLSLLHGLADGSQLH 634
            +G+ PD  T  S+L GL   ++L 
Sbjct: 469 SSGVCPDTITFRSMLAGLCTKAELQ 493



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 201/449 (44%), Gaps = 18/449 (4%)

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
           M + G    +  +T ++  LCRE ++ +A+ L   M      PD +TY  ++N +C+   
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
              A ++L  M    +     ++  IV  LC+ G   ++ N   +       P    +N 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           +++  C+ GK+  A+ +L  M +R I  D  +++  I    +  ++  A EL   M+  +
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG----------- 486
           + P   TYS+ + G CK    EDA  +F  + ++    D I+ + L++G           
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            CQV  +  A ++F  M  NG S    + N L+ GLC   K++KA+ +  +   S     
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS-MSEQNKLKDCALFF 605
           T+T   I+ G+ K  +  +   +   + V G   DV  Y ILI   + E N L+   ++ 
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
            ++ K G++P   T  S++ G    ++L      ++ +VS+    D   ++ LI G  K 
Sbjct: 361 EMLCK-GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G       L   M  +G V D  T+  L+
Sbjct: 420 GRVDDGLELFSEMCQRGLVADTITYNALI 448



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 209/472 (44%), Gaps = 45/472 (9%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREA 133
           D  SAL + + +  + + +     Y  ++ +L   GN  + + +   M  K  +PNV   
Sbjct: 60  DTVSALNMLRKMD-ESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVL-T 117

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
              ++  + ++ + + A ++L +M        V  F+ ++ A V+E +  +    +Y+EM
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGK-VSGAEELYREM 176

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR- 252
           ++  I P   T + +++   + +R+E A   F  M  KGC P+  T   +I G     R 
Sbjct: 177 LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRH 236

Query: 253 ----------VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
                     V+ +  +  EM   G+  ++     ++  LC   KLE+A+ +FK+ +   
Sbjct: 237 LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSK 296

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           +  D  T   +IN +C+  ++D+A D+   +      P + V  D+V     +G F +  
Sbjct: 297 MDLDTATCNIIINGMCKGNKVDEAWDLFNSL------PVNGVETDVVTYNILIGVFVKEG 350

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEE 422
           NFL  +  Y                        LE +    I    ++N  +   C+   
Sbjct: 351 NFLRAEDIY------------------------LEMLCKGIIPSTVTYNSMVDGFCKQNR 386

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           + +A +++  MV     PD  T+S  + G CK    +D L +F ++  + LV D+I+Y+ 
Sbjct: 387 LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNA 446

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           L+ G C+V  +  A ++F  M  +G    + +F  ++ GLC   ++ K + +
Sbjct: 447 LIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTM 498



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 159/358 (44%), Gaps = 15/358 (4%)

Query: 88  IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
           I++       T+  +I      G V   E L + M++           S++  F  H R+
Sbjct: 142 IERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201

Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR----GFADFVFV------YKEMVKAG 197
             A  +   M S G    +   N ++      KR    GF     V      ++EM+  G
Sbjct: 202 EDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNG 261

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P++ T N LL  L E  ++E AL+ F+   K     ++ T  I+I G+   ++VD++ 
Sbjct: 262 VSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW 321

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +   +   G++ ++  Y  +I +  +E     A  ++  M    ++P  +TY  +++  
Sbjct: 322 DLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGF 381

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYV--T 373
           C+  RL++A  +++ M+  G +P    F  +++G C+ G+ D+ +    + C  G V  T
Sbjct: 382 CKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADT 441

Query: 374 SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
             +NAL+   C  G    A+ I E+M    +  D  ++   +  LC   E++K   +L
Sbjct: 442 ITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 1/188 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +V+ A  +  ++   G +  V  +N+++G  V+E   F     +Y EM+  GI+P+  T 
Sbjct: 316 KVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGN-FLRAEDIYLEMLCKGIIPSTVTY 374

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N +++   + NR+E A      M  +GC P+  TF  +IKG     RVDD + +  EM  
Sbjct: 375 NSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQ 434

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G+  +   Y  +I   C+   L  A  +F+ M +  + PD +T+  ++  LC    L  
Sbjct: 435 RGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQK 494

Query: 326 ANDILEDM 333
              +LED+
Sbjct: 495 GLTMLEDL 502



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 12/349 (3%)

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEE 422
            +E  C         L+   C  G+   A  ++++M +     D  ++   +  +C+  +
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
              A  +L +M  S +  +   YSA V   CK  N+  A  +F ++  + +  + ++Y+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           +++G C   K ++A ++   M +        +F+ LI       KV  A  L        
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV-----------EAYCILIQS 591
              TT TY+ ++ G  K  R +D   +   M+ +GC+ D+            A   LI  
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             +   +      F  M+  G+ PD  T  +LL GL +  +L                LD
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           ++  NI+ING+ K     +A  L + +   G   D  T+ +L+G  V E
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKE 349


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 197/465 (42%), Gaps = 36/465 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR--IESALDQFR 226
           FN +L +I + K   +  + +  +M   GI PN+ TL+ L+      NR  I  AL  F 
Sbjct: 64  FNKLLTSIAKMKH-HSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFD 122

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
           +M  +G  P+  T+  +I GL        ++ +LG M     Q  +  Y  II  LC++ 
Sbjct: 123 KMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR 182

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           ++ EA  LF  M    + PD  TY  LI+ LC          +L +M+   + P    F 
Sbjct: 183 QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 242

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK--I 404
            +V  LC+ GK              VT  H+                 +++KM  R   +
Sbjct: 243 TVVDALCKEGK--------------VTEAHD-----------------VVDKMIQRGGCM 271

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  S+N  I   C+ + I KA  L G M    ++PD  TYS  + G C +   +DA+ +
Sbjct: 272 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 331

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F ++ A S + + ++Y  L++ LC+   + EA+ +   +  +         NI I G+C 
Sbjct: 332 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 391

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             +++ A  L S   S G      TY+ ++ GL +     +   +  +M   GC L+   
Sbjct: 392 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 451

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
           Y  + +     N+          MV  G   D  TM   +  L+D
Sbjct: 452 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 496



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 200/460 (43%), Gaps = 19/460 (4%)

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
           N ++ AI  F  M  +   P  + + +L+  + +         +   M   G+ P     
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 346 VDIVRGLCEV--GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
             ++   C +  GK  E+++  +   G    P    +  L+   C  G    A  +L  M
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159

Query: 400 ADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
             +    +  ++N  I  LC++ ++ +A+ L   MV   + PD  TY++ +   C LC +
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 219

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM-SKNGCSLSSSSFNI 517
           +    +  ++    ++ D +S++ +V+ LC+  K+TEA +V   M  + GC  +  S+N 
Sbjct: 220 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNT 279

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI G C ++++DKA+ L            T TY+ ++ GL  ++R +D + +  +M+   
Sbjct: 280 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 339

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              ++  Y IL+  + +   L +       +  + L PD +     + G+    +L    
Sbjct: 340 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 399

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM-----LGKGWVPDATTHGL 692
              + L S     D   Y+I+INGL + GL  +AS L   M        G + +  T G 
Sbjct: 400 DLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGF 459

Query: 693 LVGSSVG------EEIDSRRFAFDSSSFPDSVSDILAEGL 726
           L  +         +E+ +R F+ D+S+    V  +  +GL
Sbjct: 460 LRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 499



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 167/417 (40%), Gaps = 74/417 (17%)

Query: 72  NTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNV 130
           N   +  AL +F  + I + F+    TY  +I  L   GN      L  +MV++   PNV
Sbjct: 110 NRGKIGEALHLFDKM-IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE--EKRGFADFVF 188
             A  +++ S     +V  A  +   M + G    +  +N ++ A+    E +  A  + 
Sbjct: 169 F-AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLL- 226

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM-HKKGCCPNSRTFEIVIKGL 247
              EMV + I+P+V + N +++ L +  ++  A D   +M  + GC PN  ++  +I G 
Sbjct: 227 --NEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY 284

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
               R+D ++ + GEM    +  +   Y+ +I  LC   +L++AI LF  M A   +P+ 
Sbjct: 285 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 344

Query: 308 LTYEELINCLCENL-----------------------------------RLDDANDILED 332
           +TY  L++ LC+N                                     L+ A D+  +
Sbjct: 345 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           +   GL P    +  ++ GLC  G  DE+     +           + E  C      L 
Sbjct: 405 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE-----------MDENGCT-----LN 448

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            CI              +N   R    N E  +A +LL  MV      D +T + FV
Sbjct: 449 GCI--------------YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 491


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 230/510 (45%), Gaps = 16/510 (3%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           GI P+ ++ N +L  L     ++ A+  F+ + +K  C    ++ I++K L    R+ D+
Sbjct: 221 GISPSPESCNAVLCRL----PLDEAVQLFQELPEKNTC----SYNILLKALCTAGRIKDA 272

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +  EM       ++  Y  ++   C  ++LE AI+L   M A  L  + + Y  +I  
Sbjct: 273 HQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS 374
           LC+  ++ DA  ++EDM++ G+     VF  ++ G C  G    + N+ ++  K G    
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389

Query: 375 --PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
              + AL+   C AG+   A+ +L++M D+ +  D  ++ + I   C+  ++ +A+ +  
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +MV   V P+  TY+A   G CK  +   A  +  ++ ++ L L+  +Y+ L+ GLC+  
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + +A+     M + G      ++  +I  LC  +++D+A  L       G   T  TY 
Sbjct: 510 NLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYN 569

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +M G     R +    +L  ML +    +   Y  L++    +  +K     +  M+  
Sbjct: 570 VLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +VP+  T   L+ G      +       ++++     L +S YN LI  L K+   ++A
Sbjct: 630 EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             L + M  +    +   +   +  S  E+
Sbjct: 690 RRLFEKMRKERLTAEPDVYNFYIDLSFNED 719



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 208/442 (47%), Gaps = 9/442 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           +Y  ++  L  AG +++   L   M     P+V    I +V  +     +  A+++L  M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP--PDVVTYGI-MVHGYCTLSELETAIKLLSEM 311

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G +L+   +  V+  + +E +  +D V V ++MV  G+V +      ++        
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQ-VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +A + F  M K+G   +  T+  +I GL     + ++  +L EM D G+ ++   YT 
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C+  K+ EA  +   M    + P+ +TY  L + LC+   +  AN++L +M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           L      +  ++ GLC+ G  ++++  + D       P    +  ++   C + +   A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 394 CILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L++M D+ I     ++N+ +   C +  +     LL  M+  ++ P+  TY++ +   
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C   N +    +++ + +Q +V +  +Y+ L++G C+   + EA+     M + G  L++
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA 670

Query: 513 SSFNILIYGLCVMRKVDKAIRL 534
           SS+N LI  L   +K  +A RL
Sbjct: 671 SSYNALIRLLNKKKKFTEARRL 692



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 70/424 (16%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-------------- 178
           A  S++    +  +V+ A+RV+ +M   G  L   VF  V+                   
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 179 EKRGFADFVFVY--------------------KEMVKAGIVPNVDTLNY--LLEVLFETN 216
           +KRG A     Y                    +EM   G+  +VD + Y  L++   +  
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTVLIDGYCKVG 439

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           ++  A     +M +K   PN  T+  +  GL     V  +  +L EM   G++L +  Y 
Sbjct: 440 KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYN 499

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC+   LE+A+R    M    L PD  TY  +I  LC++  LD A+ +L++M+  
Sbjct: 500 SLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+ PT                              VT  +N L+   C +G+    K +L
Sbjct: 560 GIKPT-----------------------------IVT--YNVLMNGFCMSGRVEGGKRLL 588

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E M ++ I  +  ++N  ++  C  + ++   E+   M+   VVP+  TY+  + G CK 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N ++AL    ++  +   L + SY+ L+  L + +K TEA  +F  M K   +     +
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708

Query: 516 NILI 519
           N  I
Sbjct: 709 NFYI 712



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 46/257 (17%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVL 154
           TY  +I  L  +  ++    L Q M+ +    ++  +++   L+  F    RV G  R+L
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDK---GIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M       +   +N ++     EK        +YK M+   +VPN +T N        
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEK-NMKSTTEIYKGMLSQEVVPNENTYN-------- 639

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
                                      I+IKG      + +++    EM + G +L  S 
Sbjct: 640 ---------------------------ILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA----NDIL 330
           Y  +I +L ++ K  EA RLF+ MR   L  +   Y   I+       L+      ++++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732

Query: 331 EDMIVIGLTPTDDVFVD 347
           E  +V  +  TDD F +
Sbjct: 733 EVTLVKSIADTDDDFAE 749


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 202/436 (46%), Gaps = 45/436 (10%)

Query: 125 ERY--PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA------- 175
           ERY  P+V  A  +L+  F+   ++  A RVL  M S GF   V  +N+++G+       
Sbjct: 131 ERYGKPDVF-AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL 189

Query: 176 -----IVEE--KRGFADFVFVYK--------------------EMVKAGIVPNVDTLNYL 208
                I EE  K      V  Y                     EM+  G+ P+  T N +
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAI 249

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           +  + +   ++ A +  R +  +GC P+  T+ I+++ L++  +  +   ++ EM  +G 
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           +  +  ++ +I  LCR+ K+EEA+ L + M+   L PD   Y+ LI   C   RLD A +
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCC 384
            LE MI  G  P    +  I+ GLC  GK D+++   E      C    S +N L     
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
           ++G  + A  ++ K+ ++ I  D  ++N  I  LC +  + +A ELL  M      P+  
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           +Y+  +LG CK+    DA+ V   ++ +    +  +Y  L+EG+       EA+E+    
Sbjct: 490 SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL--AN 547

Query: 504 SKNGC-SLSSSSFNIL 518
           S +G  ++S  SFN L
Sbjct: 548 SLHGMNAISEDSFNRL 563



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 202/454 (44%), Gaps = 7/454 (1%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           AG   E     + MV + Y         L+  F N   +  A RV+  +   G K  V  
Sbjct: 82  AGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFA 140

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N ++   ++  +   +   V   M   G +P+V T N ++       +++ AL+ F  +
Sbjct: 141 YNALISGFIKANQ-LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K  C P   T+ I+I+  I +  +D ++ +L EM   G++ +   Y  II  +C+E  +
Sbjct: 200 LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMV 259

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++A  L + + +    PD +TY  L+  L    +  +   ++ +MI IG  P       +
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSIL 319

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRK 403
           +  LC  GK +E+VN L         P    ++ L+   C  G+  LA   LE M +D  
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
           + D  ++N  +  LC   +  +A E+  ++      P+ ++Y+          +   AL 
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++  Q +  D I+Y+ L+  LC+   + EA+E+   M       +  S+NI++ GLC
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            + + + AI + +     G     +TY  ++ G+
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 188/441 (42%), Gaps = 41/441 (9%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV  G  P+V     L++  F +  I  A      + + G  P+   +  +I G I  ++
Sbjct: 95  MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGK-PDVFAYNALISGFIKANQ 153

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           ++++  +L  M   G   ++  Y  +I   C   KL+ A+ +F+ +   +  P  +TY  
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI     +  +D A  +L++M+  GL P    +  I+RG+C+    D++   L       
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273

Query: 373 TSP----HNALLECCCNAGKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
             P    +N LL    + GK+    K I E ++     +  + +I I  LC + ++ +A 
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            LL  M    + PD   Y   + G C+    + A      + +   + D ++Y+ ++ GL
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL------------------------- 522
           C+  K  +A+EVF  + + GC  + SS+N L   L                         
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453

Query: 523 --------CVMRK--VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
                   C+ R   VD+AI L     S        +Y  I+LGL K+ RA D + VLA 
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513

Query: 573 MLVEGCALDVEAYCILIQSMS 593
           M  +GC  +   Y +LI+ + 
Sbjct: 514 MTEKGCQPNETTYILLIEGIG 534



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 201/473 (42%), Gaps = 43/473 (9%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  KG  P+      +IKG   NSR     + + E+ +   + ++  Y  +I    + N+
Sbjct: 95  MVDKGYTPDVILCTKLIKGFF-NSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQ 153

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           LE A R+   M++   +PD +TY  +I   C   +LD A +I E++              
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL-------------- 199

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
                            L+D C      +  L+E     G   +A  +L++M  + +  D
Sbjct: 200 -----------------LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++N  IR +C+   + KA+ELL  +      PD  TY+  +        + +  ++  
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++ +     + +++S L+  LC+  K+ EAV +   M + G    +  ++ LI G C   
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           ++D A        S G       Y  IM GL +  +A   L V  ++   GC  +V +Y 
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422

Query: 587 ILIQSM-SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA-DGSQLHLVSSGINKLV 644
            L  ++ S  ++ +   +   ++   G+ PD  T  SL+  L  DG    +V   I  LV
Sbjct: 423 TLFSALWSSGDRYRALEMILKLL-NQGIDPDEITYNSLISCLCRDG----MVDEAIELLV 477

Query: 645 ---SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              S     +   YNI++ GL K    + A  +L  M  KG  P+ TT+ LL+
Sbjct: 478 DMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLI 530



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 12/352 (3%)

Query: 353 CEVGKFDESVNFLE---DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA 405
           C  GK++ES+ FLE   DK GY  +P       L++   N+     A  ++E +      
Sbjct: 80  CRAGKYNESLYFLECMVDK-GY--TPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKP 136

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D  ++N  I    +  ++  A  +L RM     +PD  TY+  +   C     + AL +F
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++   +     I+Y+ L+E       I  A+++   M   G    + ++N +I G+C  
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE 256

Query: 526 RKVDKAIR-LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             VDKA   LRSL+ S G      TY  ++  L+   +  +   ++++M+  GC  +V  
Sbjct: 257 MMVDKAFELLRSLS-SRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           + ILI ++    K+++       M + GL PD      L+ G     +L L +  +  ++
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           SD  + D   YN ++ GL + G   QA  + + +   G  P+ +++  L  +
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/434 (21%), Positives = 187/434 (43%), Gaps = 9/434 (2%)

Query: 270 LELSFYTCIIPMLCRENKLE--EAIRLFKMMRALDLMP---DELTYEELINCLCENLRLD 324
           L  +  +CI P L   NK+   + +R+    R   ++     E+   +L+N  C   + +
Sbjct: 27  LHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYN 86

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLC---EVGKFDESVNFLEDKCGYVTSPHNALLE 381
           ++   LE M+  G TP   +   +++G      +GK    +  LE         +NAL+ 
Sbjct: 87  ESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALIS 146

Query: 382 CCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
               A +   A  +L++M  R  + D  ++NI I   C   ++  A E+   ++  +  P
Sbjct: 147 GFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEP 206

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
              TY+  +         + A+++  ++ ++ L  D+++Y+ ++ G+C+   + +A E+ 
Sbjct: 207 TVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELL 266

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             +S  GC     ++NIL+  L    K  +  +L S   S G      T++ ++  L + 
Sbjct: 267 RSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRD 326

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            + ++ + +L  M  +G   D   Y  LI     + +L     F   M+  G +PD    
Sbjct: 327 GKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNY 386

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +++ GL    +         KL       + S YN L + LW  G   +A  ++  +L 
Sbjct: 387 NTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLN 446

Query: 681 KGWVPDATTHGLLV 694
           +G  PD  T+  L+
Sbjct: 447 QGIDPDEITYNSLI 460


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 206/458 (44%), Gaps = 59/458 (12%)

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           K ++A+RLFK + A    P+  TY  LI   C+  ++  A  +  DM   GL P      
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 347 DIVRGLCEVGKFDESVN-FLEDKCGY---VTSPHNALLECCCNAGKFFLAKCILEKMADR 402
            ++ GLCE+G+   ++  F E + G     ++ HN LL        FF+A   +E   + 
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLR------GFFMAGRAIEFFKEM 118

Query: 403 KIA----DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV------------------- 439
           K +    D +S++I +  L ++  + +A+ L   M  S  +                   
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 440 -------------PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
                        P+  TYS  +   CKL   E+A  VF ++   + V ++++++ L+ G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR-KVDKAIRLRSLAYSSGTSY 545
            C+   + +A+++F  M K GC  +  ++N LI  LC  R  V  A+ L +    +G + 
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP 298

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           T  TY  ++ G    +RA D L +L  M  EGC  DV  Y  LI  +   N+++D    F
Sbjct: 299 TIVTYNSLIQGFS--ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 356

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           N M  A   P+  T   L+ GL    ++    + ++++ +     D + +N +I    K 
Sbjct: 357 NGMACA---PNVTTFNFLIRGLCAQKKVEEARNILDRMTAP----DMTTFNTIILAFCKA 409

Query: 666 GLTSQASYLLDLMLGKGWVPDA-TTHGLLVG--SSVGE 700
           G    A  ++  ML  G+ P+  TT+ L  G  SS G+
Sbjct: 410 GAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSKGK 447



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 213/492 (43%), Gaps = 73/492 (14%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA------DFVFVYKEMVKAGIVPNVD 203
           A+R+   + +G F  +   +NV++       RGF         V V+ +M  +G++PN  
Sbjct: 9   ALRLFKEVLAGLFAPNAHTYNVLI-------RGFCKGGQMHQAVSVFSDMKSSGLLPNAS 61

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T+N LL  L E  ++ SAL  FR M      P S +  I+++G     R   ++    EM
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEM 118

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G++ +L  Y  ++  L    ++ EA  LF    A+   PD +TY  L++  C+  + 
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQT 175

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPHNAL 379
            +A  ++++++  G  P    +  I+   C++ K +E+    +  +E  C       N L
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 235

Query: 380 LECCCNAGKFFLAKCILEKMADRKI---ADCDSWNIPIRWLCENEE-IRKAYELLGRMVV 435
           +   C AG    A  +  +M   KI   A   ++N  I  LC+    +  A +L  ++  
Sbjct: 236 IAGFCKAGMLEDAIKLFAEM--EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEG 293

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           + + P   TY++ + G  +  N  D LR+   + A+    D I+Y+ L+ GLC   ++ +
Sbjct: 294 AGLTPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVED 351

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  +F  M+   C+ + ++FN LI GLC  +KV++A  +        T+   +T+  I+L
Sbjct: 352 AQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEARNI----LDRMTAPDMTTFNTIIL 404

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              K     D   V+  ML                                   K G  P
Sbjct: 405 AFCKAGAMHDAREVMKDML-----------------------------------KHGFYP 429

Query: 616 DRETMLSLLHGL 627
           +  T  +L HG+
Sbjct: 430 NTYTTYALAHGI 441



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/450 (21%), Positives = 189/450 (42%), Gaps = 58/450 (12%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISL 137
           AL++FK V +   F   A TY  +I      G + +   +  +M      PN    + +L
Sbjct: 9   ALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNA-STMNTL 66

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAG 197
           +       +++ A+++   M +G F  +    N++L       R     +  +KEM  +G
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRA----IEFFKEMKASG 122

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P++++ + LL  L ++ R+  A   F  M    C P+  T+ +++ G     +  ++ 
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQ 179

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
           S++ E+   G +  +  Y+ II   C+ +K+EEA  +F  M   + +P+ +T+  LI   
Sbjct: 180 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 239

Query: 318 CENLRLDDANDILEDMIVI------------------------------------GLTPT 341
           C+   L+DA  +  +M  I                                    GLTPT
Sbjct: 240 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 299

Query: 342 DDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
              +  +++G  E  + ++ +  L     + C      +N L+   C+A +   A+ +  
Sbjct: 300 IVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFN 357

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
            MA     +  ++N  IR LC  +++ +A  +L RM      PD  T++  +L  CK   
Sbjct: 358 GMA--CAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAGA 411

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
             DA  V + +       ++ +   L  G+
Sbjct: 412 MHDAREVMKDMLKHGFYPNTYTTYALAHGI 441


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 182/406 (44%), Gaps = 39/406 (9%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR----------- 181
           A  +L+  F    R++ A RVL  M S  F      +N+++G++    +           
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 182 -----------------------GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
                                  G  + + +  EM+  G+ P++ T N ++  + +   +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           + A +  R +  KGC P+  ++ I+++ L+   + ++   ++ +MF       +  Y+ +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LCR+ K+EEA+ L K+M+   L PD  +Y+ LI   C   RLD A + LE MI  G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAG-KFFLAK 393
            P    +  ++  LC+ GK D+++       E  C   +S +N +     ++G K     
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            ILE M++    D  ++N  I  LC    + +A+ELL  M      P   TY+  +LG C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           K    EDA+ V   +       +  +Y+ L+EG+       EA+E+
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 177/398 (44%), Gaps = 5/398 (1%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V   N L+    + NRI+ A     RM  K   P++ T+ I+I  L +  ++D ++ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L ++     Q  +  YT +I     E  ++EA++L   M +  L PD  TY  +I  +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSP 375
              +D A +++ ++ + G  P    +  ++R L   GK++E          +KC      
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           ++ L+   C  GK   A  +L+ M ++ +  D  S++  I   C    +  A E L  M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
               +PD   Y+  +   CK    + AL +F ++       +S SY+ +   L       
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A+ +   M  NG      ++N +I  LC    VD+A  L     S     +  TY  ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           LG  K  R +D + VL  M+  GC  +   Y +LI+ +
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 222/486 (45%), Gaps = 25/486 (5%)

Query: 89  QKRFQHTA-----DTY-CKMILKLGLAGNVEEMEGLCQNMVKERY-PNVR--EALISLVF 139
           ++R QH+      DT   K+  +   +GN  E   L + MV++ Y P+V     LI   F
Sbjct: 76  ERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFF 135

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
           +  N   +  A+RV+  +   G +  V  +N ++    +  R   D   V   M      
Sbjct: 136 TLRN---IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNR-IDDATRVLDRMRSKDFS 190

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+  T N ++  L    +++ AL    ++    C P   T+ I+I+  +    VD+++ +
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM---PDELTYEELINC 316
           + EM   G++ ++  Y  II  +C+E  ++ A   F+M+R L+L    PD ++Y  L+  
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA---FEMVRNLELKGCEPDVISYNILLRA 307

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           L    + ++   ++  M      P    +  ++  LC  GK +E++N L+       +P 
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367

Query: 376 ---HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
              ++ L+   C  G+  +A   LE M +D  + D  ++N  +  LC+N +  +A E+ G
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           ++      P+ ++Y+          +   AL +  ++ +  +  D I+Y+ ++  LC+  
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EA E+   M       S  ++NI++ G C   +++ AI +      +G     +TYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 552 KIMLGL 557
            ++ G+
Sbjct: 548 VLIEGI 553



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 202/452 (44%), Gaps = 20/452 (4%)

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +S+ +L  M   G   ++   T +I        + +A+R+ +++      PD   Y  LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCG 370
           N  C+  R+DDA  +L+ M     +P    +  ++  LC  GK D ++      L D C 
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
                +  L+E     G    A  ++++M  R +  D  ++N  IR +C+   + +A+E+
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           +  + +    PD  +Y+  +        +E+  ++  ++ ++    + ++YS L+  LC+
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             KI EA+ +   M + G +  + S++ LI   C   ++D AI       S G       
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM-SEQNKLKDCALFFNVM 608
           Y  ++  L K  +A   L +  ++   GC+ +  +Y  +  ++ S  +K++   +   +M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465

Query: 609 VKAGLVPDRETMLSLL-----HGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGL 662
              G+ PD  T  S++      G+ D +   LV       +   E   S + YNI++ G 
Sbjct: 466 SN-GIDPDEITYNSMISCLCREGMVDEAFELLVD------MRSCEFHPSVVTYNIVLLGF 518

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K      A  +L+ M+G G  P+ TT+ +L+
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 3/259 (1%)

Query: 110 GNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G  EE E L   M  E+  PNV    I L+ +     ++  AM +L  M   G       
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSI-LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           ++ ++ A   E R      F+ + M+  G +P++   N +L  L +  + + AL+ F ++
Sbjct: 371 YDPLIAAFCREGRLDVAIEFL-ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + GC PNS ++  +   L ++     ++ ++ EM   GI  +   Y  +I  LCRE  +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +EA  L   MR+ +  P  +TY  ++   C+  R++DA ++LE M+  G  P +  +  +
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549

Query: 349 VRGLCEVGKFDESVNFLED 367
           + G+   G   E++    D
Sbjct: 550 IEGIGFAGYRAEAMELAND 568



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/370 (22%), Positives = 154/370 (41%), Gaps = 12/370 (3%)

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL-------AKC 394
           D   + I    C  G + ES++ LE     V   +N  +  C    K F        A  
Sbjct: 89  DTQMLKIFHRSCRSGNYIESLHLLET---MVRKGYNPDVILCTKLIKGFFTLRNIPKAVR 145

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           ++E +      D  ++N  I   C+   I  A  +L RM      PD  TY+  +   C 
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               + AL+V  Q+ + +     I+Y+ L+E       + EA+++   M   G      +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N +I G+C    VD+A  +       G      +Y  ++  L+   + ++   ++ +M 
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            E C  +V  Y ILI ++    K+++      +M + GL PD  +   L+       +L 
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    +  ++SD  + D   YN ++  L K G   QA  +   +   G  P+++++  + 
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445

Query: 695 GS--SVGEEI 702
            +  S G++I
Sbjct: 446 SALWSSGDKI 455



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 86/242 (35%), Gaps = 36/242 (14%)

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           RQ  +QSL        K+    C+     E++ +   M + G +        LI G   +
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           R + KA+R+  +    G                                      DV AY
Sbjct: 138 RNIPKAVRVMEILEKFGQP------------------------------------DVFAY 161

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    + N++ D     + M      PD  T   ++  L    +L L    +N+L+S
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           D+       Y ILI     EG   +A  L+D ML +G  PD  T+  ++     E +  R
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281

Query: 706 RF 707
            F
Sbjct: 282 AF 283


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 144/656 (21%), Positives = 268/656 (40%), Gaps = 62/656 (9%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVL--DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMIL 104
           T   EA+++ L   LSP  +  VL      D  +A + F+W   Q +++H  + + +M+ 
Sbjct: 75  TPKLEAQLRHLLRVLSPPQVRAVLRAQAQGDARAAFEFFRWADRQWQYRHAPEVFDEMLG 134

Query: 105 KLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
            L      +    + + M++            L+ S+    ++  AMRVL  M + G   
Sbjct: 135 LLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAP 194

Query: 165 SVDV-----FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
            + +       +V+   V++  GFAD       M + G+ P+V T N L++ L    R+ 
Sbjct: 195 DISICNVAVNVLVVAGRVDKALGFAD------RMRRVGVEPDVVTYNCLIKGLCSVRRVV 248

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQLELSFYTCI 278
            AL+    M K GC P+  ++  V+  L    RV +  S+L  M  D G+  +   Y  +
Sbjct: 249 EALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNML 308

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I +L +    +EA+   +         DE+ Y  +++  C N R+ +A +I+ +MI    
Sbjct: 309 IHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKEC 368

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKC 394
            P    +  +V G C +G+ D++   +    ++ C      H ALL   C  GK   A  
Sbjct: 369 HPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWE 428

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           +L K  +      D W                             P   TYS  + G  +
Sbjct: 429 LLNKSGE------DWWT----------------------------PSDITYSVVMHGFRR 454

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               +++  V  Q+  +     ++  + L+  LC+  K  EA E        GC+++  +
Sbjct: 455 EGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVN 514

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           F  +I+G      ++ A+ L    Y S       TYT ++  L +  R K+   ++ +ML
Sbjct: 515 FTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKML 574

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS----LLHGLADG 630
             G    +  Y  +I    E+  +++     + M+       R+ + S    ++  L   
Sbjct: 575 NRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLA------RQELKSVYNQVIEKLCAF 628

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            +L+     ++K++  +   D+   +IL+      GLT QA  +   M  +  +PD
Sbjct: 629 GKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPD 684



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 247/546 (45%), Gaps = 19/546 (3%)

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
           ++ + +VF+ +LG ++   R       V + M++ G+        +L+       ++ SA
Sbjct: 122 YRHAPEVFDEMLG-LLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSA 180

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           +   + M   GC P+     + +  L+   RVD ++     M  +G++ ++  Y C+I  
Sbjct: 181 MRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKG 240

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LC   ++ EA+ +  +M      PD+++Y  +++ LC+  R+ +   +L  M       T
Sbjct: 241 LCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLT 300

Query: 342 DDVFVD-IVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFL 391
           D V  + ++  L + G  DE++ FL          D+ GY     +A++   C  G+   
Sbjct: 301 DQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGY-----SAVVHSFCLNGRMAE 355

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           AK I+ +M  ++   D  +++  +   C   EI +A +++  M  +   P+  T++A + 
Sbjct: 356 AKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLN 415

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G CK+    +A  +  +          I+YS ++ G  +  K+ E+ +V   M + G   
Sbjct: 416 GLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFP 475

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           ++   N+LI+ LC   K  +A        S G +     +T ++ G  +    +  L +L
Sbjct: 476 TTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLL 535

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             + +     DV  Y +++ ++  + +LK+       M+  GLVP   T  +++H   + 
Sbjct: 536 DDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEK 595

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
             +  +   ++K+++  E+   S+YN +I  L   G  ++A  LL  +L      DA T 
Sbjct: 596 GTVEELVDLLDKMLARQEL--KSVYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQTC 653

Query: 691 GLLVGS 696
            +L+ S
Sbjct: 654 HILMES 659


>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
          Length = 788

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 152/667 (22%), Positives = 277/667 (41%), Gaps = 40/667 (5%)

Query: 41  MIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYC 100
           M +   TT  +  I+SL  +     ++ VL        AL  F+WV  +  F+H  DTY 
Sbjct: 123 MARRPWTTRLQNSIRSLARSFDQSLVLAVLRGARHPDHALHFFRWVE-KTGFRHDPDTYR 181

Query: 101 KMILKLGLAGNVEEMEG-LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS 159
           ++IL L  A  +      L  +M     P   +   SL+  +        A+++   +  
Sbjct: 182 EIILLLARASMLNHARCILLDDMPDRLVPPSEDMFASLIEGYGCARIPQEAVKIFRRLPE 241

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
            G   +V  ++ V  AI+   R  A    ++  M+  G++P + T N LL     + ++E
Sbjct: 242 LGVTRTVRSYDAVFKAILRSGR-VAMARRLFNAMIAEGVLPVLSTYNTLLWGFCLSIKME 300

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
           +A   F  M ++G  P+  T+  ++ G     ++DD+  +  EM   G       Y  +I
Sbjct: 301 TAQRFFADMKERGIAPDLVTYNTILNGWARAKKMDDAEKVFAEMTAAGFAPNSISYNIMI 360

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL-RLDDANDILEDMIVIGL 338
                  ++++ +R+F  M    L   E T+  L+  LC+++ R  +A   L +M  + L
Sbjct: 361 KGYVCSGRVDDGLRMFSEMGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQL 420

Query: 339 TPTD-DVFVDIVRGLCEVGKFDESVNFLEDKCGY---VTSP--HNALLECCCNAGKFFLA 392
           TP+D  +F+ +V  LCE G  + ++        +   V  P  +  LLE  C   K   A
Sbjct: 421 TPSDKSIFLRLVTSLCESGDLEGALEVHRKTSQFNHVVVDPMQYGVLLESLCKGEKHESA 480

Query: 393 KCILEKMADR--------KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             +L+++ ++           +  ++N  I +LC++ + +KA E   R ++   V D   
Sbjct: 481 IALLDELLEKGTMQSPQYPTLEPSAYNPMIEYLCDHGDTKKA-EAFFRQLMKKGVDDKVA 539

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           +++ + G  K    E A  +   ++   +  D+ SY  LVE   +  +  +A      M 
Sbjct: 540 FNSLIRGHAKEGMPEAASEILTIMTRHGVPTDADSYVLLVESFLKKSEPADARTALDSMM 599

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           + G   S+S F  ++  L    +V  A R+       G         KI+  L      +
Sbjct: 600 EQGHLPSASLFRSVMVALFDDGRVQTASRVMKSMIEKGVKENMDMVHKILDALFMRGHVE 659

Query: 565 DLLVVLAQMLVEGCALDVEAYCILI---QSMSEQNKL------KDCALFFNVMVKAGLVP 615
           + L  +  M++  C  D++   I +      +E  KL      +DC + F+         
Sbjct: 660 EALGRINLMIMNDCTPDIDHLLITLCDSDKATEAQKLVEFALERDCDVSFSSY------- 712

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           DR     +L  L    +     S + K+ +   V+D    + +I  L  EG T QA  L 
Sbjct: 713 DR-----VLDVLYTAGKTLPAYSILCKIKAKGGVVDKKGCDAIIKSLIAEGNTKQADILS 767

Query: 676 DLMLGKG 682
            ++ GK 
Sbjct: 768 RILAGKA 774



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 106/502 (21%), Positives = 201/502 (40%), Gaps = 47/502 (9%)

Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
           + P+ D    L+E        + A+  FRR+ + G     R+++ V K ++ + RV  + 
Sbjct: 209 VPPSEDMFASLIEGYGCARIPQEAVKIFRRLPELGVTRTVRSYDAVFKAILRSGRVAMAR 268

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
            +   M   G+   LS Y  ++   C   K+E A R F  M+   + PD +TY  ++N  
Sbjct: 269 RLFNAMIAEGVLPVLSTYNTLLWGFCLSIKMETAQRFFADMKERGIAPDLVTYNTILNGW 328

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVT 373
               ++DDA  +  +M   G  P    +  +++G    G+ D+ +       E    +  
Sbjct: 329 ARAKKMDDAEKVFAEMTAAGFAPNSISYNIMIKGYVCSGRVDDGLRMFSEMGEKGLRFSE 388

Query: 374 SPHNALLECCCN-AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
               AL+   C+  G+   A+  L +MA  ++   D                    +  R
Sbjct: 389 KTFAALMPGLCDDVGRAAEARKALNEMAKLQLTPSDK------------------SIFLR 430

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA-QSLVLDSISYSKLVEGLCQVE 491
           +V S                C+  + E AL V R+ S    +V+D + Y  L+E LC+ E
Sbjct: 431 LVTSL---------------CESGDLEGALEVHRKTSQFNHVVVDPMQYGVLLESLCKGE 475

Query: 492 K-------ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           K       + E +E     S    +L  S++N +I  LC      KA          G  
Sbjct: 476 KHESAIALLDELLEKGTMQSPQYPTLEPSAYNPMIEYLCDHGDTKKAEAFFRQLMKKGVD 535

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
              + +  ++ G  K    +    +L  M   G   D ++Y +L++S  ++++  D    
Sbjct: 536 DKVA-FNSLIRGHAKEGMPEAASEILTIMTRHGVPTDADSYVLLVESFLKKSEPADARTA 594

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
            + M++ G +P      S++  L D  ++   S  +  ++      +  M + +++ L+ 
Sbjct: 595 LDSMMEQGHLPSASLFRSVMVALFDDGRVQTASRVMKSMIEKGVKENMDMVHKILDALFM 654

Query: 665 EGLTSQASYLLDLMLGKGWVPD 686
            G   +A   ++LM+     PD
Sbjct: 655 RGHVEEALGRINLMIMNDCTPD 676



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 106/481 (22%), Positives = 204/481 (42%), Gaps = 31/481 (6%)

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
            +R+ +S+  L   FD  +         ++ +L      + A+  F+ +       D  T
Sbjct: 129 TTRLQNSIRSLARSFDQSL---------VLAVLRGARHPDHALHFFRWVEKTGFRHDPDT 179

Query: 310 YEELINCLCENLRLDDANDIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL--- 365
           Y E+I  L     L+ A  IL +DM    + P++D+F  ++ G        E+V      
Sbjct: 180 YREIILLLARASMLNHARCILLDDMPDRLVPPSEDMFASLIEGYGCARIPQEAVKIFRRL 239

Query: 366 -EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEI 423
            E         ++A+ +    +G+  +A+ +   M A+  +    ++N  +   C + ++
Sbjct: 240 PELGVTRTVRSYDAVFKAILRSGRVAMARRLFNAMIAEGVLPVLSTYNTLLWGFCLSIKM 299

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A      M    + PD  TY+  + G  +    +DA +VF +++A     +SISY+ +
Sbjct: 300 ETAQRFFADMKERGIAPDLVTYNTILNGWARAKKMDDAEKVFAEMTAAGFAPNSISYNIM 359

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC--VMRKVDKAIRLRSLAYSS 541
           ++G     ++ + + +F  M + G   S  +F  L+ GLC  V R  +    L  +A   
Sbjct: 360 IKGYVCSGRVDDGLRMFSEMGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQ 419

Query: 542 GTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            T    S + +++  L +   L+ A ++    +Q       +D   Y +L++S+ +  K 
Sbjct: 420 LTPSDKSIFLRLVTSLCESGDLEGALEVHRKTSQF--NHVVVDPMQYGVLLESLCKGEKH 477

Query: 599 KDCALFFNVMVKAGLV--PDRETMLS-----LLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +      + +++ G +  P   T+       ++  L D        +   +L+    V D
Sbjct: 478 ESAIALLDELLEKGTMQSPQYPTLEPSAYNPMIEYLCDHGDTKKAEAFFRQLMKKG-VDD 536

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-EIDSRRFAFD 710
              +N LI G  KEG+   AS +L +M   G   DA ++ LLV S + + E    R A D
Sbjct: 537 KVAFNSLIRGHAKEGMPEAASEILTIMTRHGVPTDADSYVLLVESFLKKSEPADARTALD 596

Query: 711 S 711
           S
Sbjct: 597 S 597


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 146/668 (21%), Positives = 264/668 (39%), Gaps = 91/668 (13%)

Query: 63  PDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           P   IRVL +       AL+ F+WV  Q  F+ +   +C  IL + L GN         +
Sbjct: 85  PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCA-ILDI-LVGN---------D 133

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           ++   Y  V E ++S        + ++G + VL+                          
Sbjct: 134 LMHAAYW-VMERVVS--------FEMHGVVDVLI-------------------------A 159

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           G    + V+ +M++ G++P+V   N +L VL + N +  A +                  
Sbjct: 160 GHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKN------------------ 201

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                            + G M   GI+  +  Y  ++   C+E ++++A+ L   M+  
Sbjct: 202 -----------------VYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQER 244

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+++TY  L+N L +   L+ A  ++E+M+  GL  +   +  ++ G C+ G F E+
Sbjct: 245 GCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEA 304

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
            + +E+       P    +N L+   C   +    +     M   K   D  S+N  +  
Sbjct: 305 FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYG 364

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
            C    I +A+ L   +    +VP   TY+  + G C     + ALR+ ++++ Q L  D
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPD 424

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +Y+ LV G  ++  ++ A   F  M   G      ++N  I G   +     A  ++ 
Sbjct: 425 IFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
              ++G      TY   +  L +    ++   +L  M+ +G   D   Y  +I    +  
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            L+     FN M+  G+ P   T   L+H  A    L L     +K++  S   +   YN
Sbjct: 545 HLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYN 604

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-----EEIDSRRFAFDS 711
            +INGL       +A    D M  KG +P+  ++ +L+  S       E +   R   D 
Sbjct: 605 AIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664

Query: 712 SSFPDSVS 719
              PDS +
Sbjct: 665 KIQPDSFT 672


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 203/438 (46%), Gaps = 5/438 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   ++ EM+++  +P++     +L V+ + N+ +  +  + +M   G   +  +F I
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I      SR+  ++++LG+M  LG +  +     ++   C+ N+ +EA+ L   M    
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +P+ + Y  +IN LC+N  L++A ++   M   G+      +  ++ GL   G++ ++ 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
             L D       P+     AL++     G    A+ + ++M  R +  +  ++N  I   
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C +  +  A  +   MV     PD  TY+  + G CK    ED +++F +++ Q LV D+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y+ L+ G CQ  K+  A +VF  M   G S    ++NIL+  LC   K++KA+ +   
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              S       TY  I+ GL +  + K+   +   +  +G   D  AY  +I  +  +  
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479

Query: 598 LKDCALFFNVMVKAGLVP 615
            ++       M + G +P
Sbjct: 480 QREADKLCRRMKEDGFMP 497



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/439 (23%), Positives = 181/439 (41%), Gaps = 30/439 (6%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           + DD+ S+  EM        +  +T ++ ++ + NK +  I L+  M  L +  D  ++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI+C C   RL  A  +L  M+ +G  P+      ++ G C+  +F E+V+ ++   G+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
              P+  +                              +N  I  LC+N ++  A E+  
Sbjct: 179 GFVPNVVI------------------------------YNTVINGLCKNRDLNNALEVFY 208

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M    +  D  TY+  + G      + DA R+ R +  + +  + I ++ L++   +  
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EA  ++  M +     +  ++N LI G C+   +  A  +  L  S G      TY 
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G  K +R +D + +  +M  +G   D   Y  LI    +  KL      FN MV  
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G+ PD  T   LL  L +  ++      +  L      +D   YNI+I GL +     +A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448

Query: 672 SYLLDLMLGKGWVPDATTH 690
             L   +  KG  PDA  +
Sbjct: 449 WCLFRSLTRKGVKPDAIAY 467



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 137/343 (39%), Gaps = 36/343 (10%)

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           KF +   +  KM +  I+ D  S+ I I   C    +  A  LLG+M+     P   T  
Sbjct: 94  KFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLG 153

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
           + + G C+   +++A+ +   +     V + + Y+ ++ GLC+   +  A+EVF CM K 
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213

Query: 507 GCSLSSSSFNILIYGLC---------------VMRKVD--------------------KA 531
           G    + ++N LI GL                V RK+D                    +A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
             L              TY  ++ G        D   +   M+ +GC  DV  Y  LI  
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
             +  +++D    F  M   GLV D  T  +L+HG     +L++     N++V      D
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              YNIL++ L   G   +A  +++ +       D  T+ +++
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 146/320 (45%), Gaps = 37/320 (11%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           +I  L    DL++AL++F +   +K  +  A TY  +I  L  +G   +   L ++MVK 
Sbjct: 190 VINGLCKNRDLNNALEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248

Query: 126 RY-PNV---------------------------REALISLVFSF---VNHYRVNG----A 150
           +  PNV                           R +++  VF++   +N + ++G    A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
             +   M S G    V  +N ++    + KR   D + ++ EM   G+V +  T N L+ 
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKR-VEDGMKLFCEMTYQGLVGDAFTYNTLIH 367

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
              +  ++  A   F RM   G  P+  T+ I++  L  N +++ ++ ++ ++    + +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
           ++  Y  II  LCR +KL+EA  LF+ +    + PD + Y  +I+ LC      +A+ + 
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487

Query: 331 EDMIVIGLTPTDDVFVDIVR 350
             M   G  P++ ++ + +R
Sbjct: 488 RRMKEDGFMPSERIYDETLR 507



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 111/269 (41%)

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A+ L   M+ S  +P    ++  +    K+  ++  + ++ ++    +  D  S++ L+ 
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
             C+  +++ A+ +   M K G   S  +   L+ G C   +  +A+ L       G   
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
               Y  ++ GL K +   + L V   M  +G   D   Y  LI  +S   +  D A   
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             MVK  + P+     +L+        L    +   +++  S V +   YN LING    
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           G    A Y+ DLM+ KG  PD  T+  L+
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331



 Score = 38.9 bits (89), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 85/209 (40%)

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           K  +A  +FC M ++    S   F  ++  +  M K D  I L     + G S+   ++T
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++    +  R    L +L +M+  G    +     L+    + N+ ++     + M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
           G VP+     ++++GL     L+        +       D+  YN LI+GL   G  + A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
           + LL  M+ +   P+      L+ + V E
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKE 267


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 138/579 (23%), Positives = 240/579 (41%), Gaps = 74/579 (12%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY--------- 190
           +F+N   ++G +   V M   GF   V    +        KRGFA  V+ +         
Sbjct: 103 TFINFVSLSGLLECYVQMRKTGFAFGVLALML--------KRGFAFNVYNHNILLKGLCR 154

Query: 191 -----------KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
                      +EM +  ++P+V + N ++    E   +E AL+    M   GC  +  T
Sbjct: 155 NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVT 214

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           + I+I       ++D+++  L EM  +G++ +L  YT +I   C   +L+    LF  + 
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL 274

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                P  +TY  LI   C+  +L +A++I E MI  G+ P    +  ++ GLC VGK  
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334

Query: 360 ESVNFL------EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
           E++  L      +++   VT  +N ++   C  G    A  I+E M  R+   D  ++NI
Sbjct: 335 EALQLLNLMIEKDEEPNAVT--YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVV--PDCATYSAFVLGKCKLCNYEDALRVF----- 465
            +  LC   ++ +A +LL  M+  S    PD  +Y+A + G CK      AL ++     
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452

Query: 466 ------------------------------RQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                                         +Q+S   +V +S +Y+ +++G C+   +  
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  + C M  +    S   +N L+  LC    +D+A RL              ++  ++ 
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G +K    K    +L  M   G + D+  Y  LI    +   L +   FF+ MV +G  P
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           D     S+L       +   ++  + KLV    VLD  +
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 221/518 (42%), Gaps = 15/518 (2%)

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
           K GFA  V     M+K G   NV   N LL+ L        A+   R M +    P+  +
Sbjct: 122 KTGFAFGVLAL--MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  VI+G      ++ ++ +  EM   G    L  +  +I   C+  K++EA+   K M+
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            + L  D + Y  LI   C+   LD    + ++++  G +P    +  ++RG C++G+  
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299

Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPI 414
           E+    E        P    +  L++  C  GK   A  +L  M ++ +  +  ++NI I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
             LC++  +  A E++  M      PD  TY+  + G C   + ++A ++   +   S  
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 475 LDS--ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
            D   ISY+ L+ GLC+  ++ +A++++  + +   +    + NIL+        V+KA+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            L      S     + TYT ++ G  K   L  AK LL    +M V      V  Y  L+
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL---CKMRVSELQPSVFDYNCLL 536

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
            S+ ++  L      F  M +    PD  +   ++ G      +    S +  +      
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
            D   Y+ LIN   K G   +A    D M+  G+ PDA
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 241/536 (44%), Gaps = 43/536 (8%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N ++  +V  +     F F Y++M++     N  +L+ LLE   +  +   A      M 
Sbjct: 76  NNLMAKLVRSRNHELAFSF-YRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K+G   N     I++KGL  N     +VS+L EM    +  ++  Y  +I   C   +LE
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A+ L   M+        +T+  LI+  C+  ++D+A   L++M  +GL     V+  ++
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
           RG C+ G+ D                                 K + +++ +R  + C  
Sbjct: 255 RGFCDCGELDR-------------------------------GKALFDEVLERGDSPCAI 283

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  IR  C+  ++++A E+   M+   V P+  TY+  + G C +   ++AL++   +
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    ++++Y+ ++  LC+   + +AVE+   M K      + ++NIL+ GLC    +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 529 DKAIRLRSLAY--SSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVE 583
           D+A +L  L    SS T     +Y  ++ GL K   L +A D+  +L + L  G   D  
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRV 460

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
              IL+ S  +   +      +  +  + +V + +T  +++ G      L+ V+ G+   
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN-VAKGLLCK 519

Query: 644 VSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
           +  SE+  S   YN L++ L KEG   QA  L + M      PD  +  +++  S+
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 150/661 (22%), Positives = 281/661 (42%), Gaps = 54/661 (8%)

Query: 25  SSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFK 84
            ++   +++  +    M K  ++ ++E      R  L  D  I    N   LS  L+ + 
Sbjct: 63  QAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFI----NFVSLSGLLECY- 117

Query: 85  WVSIQKRFQHTADTYCKMILKLGLAGNVEE----MEGLCQNMVKERYPNV-----REALI 135
              +Q R    A     ++LK G A NV      ++GLC+N+   +  ++     R +L+
Sbjct: 118 ---VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM 174

Query: 136 SLVFSFVNHYR-------VNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGF 183
             VFS+    R       +  A+ +   M   G   S+  + +++ A      ++E  GF
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                  KEM   G+  ++     L+    +   ++     F  + ++G  P + T+  +
Sbjct: 235 ------LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I+G     ++ ++  I   M + G++  +  YT +I  LC   K +EA++L  +M   D 
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+ +TY  +IN LC++  + DA +I+E M      P +  +  ++ GLC  G  DE+  
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408

Query: 364 --FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRW 416
             +L  K    T P    +NAL+   C   +   A  I + + ++    D  + NI +  
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
             +  ++ KA EL  ++  S +V +  TY+A + G CK      A  +  ++    L   
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
              Y+ L+  LC+   + +A  +F  M ++       SFNI+I G      +  A  L  
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD------VEAYCILIQ 590
               +G S    TY+K++   +KL    + +    +M+  G   D      V  YCI   
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI--- 645

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
           S  E +KL +       +V   +V D+E   +++  + + S    ++  + ++  D E  
Sbjct: 646 SQGETDKLTE---LVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEER 702

Query: 651 D 651
           D
Sbjct: 703 D 703


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 133/560 (23%), Positives = 232/560 (41%), Gaps = 33/560 (5%)

Query: 199 VPNVDTLNYLLEVLFETNRIESAL----DQFRRMHKKGCCPNSRTFEIVIKGLIANSR-- 252
           V N    N  L +L  + R++ AL    + F       C PN  T +I+   L+   R  
Sbjct: 187 VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNE 246

Query: 253 ----VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
                D+ V+++ +  + G+ +   +   +I  LCR  K      LF  M  L  + +  
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESA 306

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
               L+  L      +  N+++E M+ + + P    F  ++  +C+  + D+++  LE  
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM 366

Query: 369 CGYVTSP------------HNALLECCCNAGKFFLAKCILEKMADRK--IADCDSWNIPI 414
            G   S             +N L++  C  G+      ++E+M  +K    D  ++N  I
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C+  EI K  EL   M    V P+  T +  V G C+      A+  F +   + + 
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC-VMRKVDKAIR 533
            D+++Y+ L+   C V    +A+E+F  M K+GCS  +  +  LI G     R  D +  
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L  L    G    T  Y  ++ G  +  +   +  +L +M   G   D   Y  LI   S
Sbjct: 547 LAELK-KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYAS 605

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
           +   LK        M+KAG+VP   T  ++++        +        + + S+V  ++
Sbjct: 606 KNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNT 665

Query: 654 -MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAF--- 709
            +YNILIN L K      A  L++ M   G  P+ TT+  +      E+   + F F   
Sbjct: 666 VIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDR 725

Query: 710 --DSSSFPDSVS-DILAEGL 726
             + +  PD ++ +IL E L
Sbjct: 726 MIEHACNPDYITMEILTEWL 745



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 201/458 (43%), Gaps = 43/458 (9%)

Query: 102 MILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN-- 158
           ++  L   GN   M  L + MV+ +  PNV    I L+       RV+ A+ VL  M+  
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGI-LINHMCKFRRVDDALEVLEKMSGG 369

Query: 159 --SGGFKLSVD----VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
             SGG  +SV+    ++N ++  + +  R       + +   + G  P+  T N L++  
Sbjct: 370 KESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGF 429

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +   IE   + F  M+K+G  PN  T   ++ G+    RV  +V+   E    G++ + 
Sbjct: 430 CKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDA 489

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             YT +I   C  N  E+A+ LF  M      PD + Y  LI+   +  R+ DA+ +L +
Sbjct: 490 VTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAE 549

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLA 392
           +  +G+ P    +  ++ G C   KF      L++       P                 
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKP----------------- 592

Query: 393 KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
                        D  ++N  I +  +N +++ A +++ +M+ + VVP  ATY A +   
Sbjct: 593 -------------DTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAY 639

Query: 453 CKLCNYEDALRVFRQVSAQSLV-LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
           C   N  +A+ +F+ + A S V  +++ Y+ L+  LC+  K+  AV +   M   G + +
Sbjct: 640 CLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPN 699

Query: 512 SSSFNILIYGLCVMRKVDKAIRL--RSLAYSSGTSYTT 547
           ++++N +  GL   + ++K      R + ++    Y T
Sbjct: 700 TTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYIT 737



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 117/527 (22%), Positives = 225/527 (42%), Gaps = 41/527 (7%)

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           A+   +YK   +  I   V+  ++LL     +  +E +L  F  +       N+    + 
Sbjct: 139 ANLSRLYKTSKELNIPLTVNAASFLLRASGRSELVEESLILFNDLDP--SVKNTYLRNVW 196

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           +  L+ + RV D++ ++ EMF+                 CR N     I LF  +   + 
Sbjct: 197 LSILLRSGRVKDALKVIDEMFESNDDSN-----------CRPNDATGDI-LFSFLLKRER 244

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             + L+ +E++N +   L+  + + +L     +G          ++  LC   K +   +
Sbjct: 245 NEELLSEDEIVNLV---LKFGE-HGVLISSFWMG---------RLITRLCRNRKTNRGWD 291

Query: 364 FLED--KCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
              +  K G V  ++  N+LL      G F     ++EKM +  I  +  ++ I I  +C
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351

Query: 419 ENEEIRKAYELLGRM--------VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           +   +  A E+L +M        +  SV PD   Y+  + G CK+   ++ L +  ++ +
Sbjct: 352 KFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS 411

Query: 471 Q-SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
           Q     D+I+Y+ L++G C+  +I +  E+F  M+K G + +  + N L+ G+C   +V 
Sbjct: 412 QKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVS 471

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A+     A   G      TYT ++     +   +  + +  +ML  GC+ D   Y  LI
Sbjct: 472 SAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
              S+  ++ D +     + K G+ PD     +L+ G    ++ H V   + ++      
Sbjct: 532 SGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK 591

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            D+  YN LI    K G    A  ++  M+  G VP   T+G ++ +
Sbjct: 592 PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINA 638


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 230/510 (45%), Gaps = 16/510 (3%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           GI P+ ++ N +L  L     ++ A+  F+ + +K  C    ++ I++K L    R+ D+
Sbjct: 221 GISPSPESCNAVLCRL----PLDEAVQLFQELPEKNTC----SYNILLKALCTAGRIKDA 272

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +  EM       ++  Y  ++   C  ++LE AI+L   M A  L  + + Y  +I  
Sbjct: 273 HQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS 374
           LC+  ++ DA  ++EDM++ G+     VF  ++ G C  G    + N+ ++  K G    
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389

Query: 375 --PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
              + AL+   C AG+   A+ +L++M D+ +  D  ++ + I   C+  ++ +A+ +  
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +MV   V P+  TY+A   G CK  +   A  +  ++ ++ L L+  +Y+ L+ GLC+  
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + +A+     M + G      ++  +I  LC  +++D+A  L       G   T  TY 
Sbjct: 510 NLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYN 569

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +M G     R +    +L  ML +    +   Y  L++    +  +K     +  M+  
Sbjct: 570 VLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +VP+  T   L+ G      +       ++++     L +S YN LI  L K+   ++A
Sbjct: 630 EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689

Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
             L + M  +    +   +   +  S  E+
Sbjct: 690 RRLFEKMRKERLTAEPDVYNFYIDLSFNED 719



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 208/442 (47%), Gaps = 9/442 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           +Y  ++  L  AG +++   L   M     P+V    I +V  +     +  A+++L  M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP--PDVVTYGI-MVHGYCTLSELETAIKLLSEM 311

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G +L+   +  V+  + +E +  +D V V ++MV  G+V +      ++        
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQ-VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +A + F  M K+G   +  T+  +I GL     + ++  +L EM D G+ ++   YT 
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C+  K+ EA  +   M    + P+ +TY  L + LC+   +  AN++L +M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           L      +  ++ GLC+ G  ++++  + D       P    +  ++   C + +   A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 394 CILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L++M D+ I     ++N+ +   C +  +     LL  M+  ++ P+  TY++ +   
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C   N +    +++ + +Q +V +  +Y+ L++G C+   + EA+     M + G  L++
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA 670

Query: 513 SSFNILIYGLCVMRKVDKAIRL 534
           SS+N LI  L   +K  +A RL
Sbjct: 671 SSYNALIRLLNKKKKFTEARRL 692



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 70/424 (16%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-------------- 178
           A  S++    +  +V+ A+RV+ +M   G  L   VF  V+                   
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 179 EKRGFADFVFVY--------------------KEMVKAGIVPNVDTLNY--LLEVLFETN 216
           +KRG A     Y                    +EM   G+  +VD + Y  L++   +  
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTVLIDGYCKVG 439

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           ++  A     +M +K   PN  T+  +  GL     V  +  +L EM   G++L +  Y 
Sbjct: 440 KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYN 499

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC+   LE+A+R    M    L PD  TY  +I  LC++  LD A+ +L++M+  
Sbjct: 500 SLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+ PT                              VT  +N L+   C +G+    K +L
Sbjct: 560 GIKPT-----------------------------IVT--YNVLMNGFCMSGRVEGGKRLL 588

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E M ++ I  +  ++N  ++  C  + ++   E+   M+   VVP+  TY+  + G CK 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N ++AL    ++  +   L + SY+ L+  L + +K TEA  +F  M K   +     +
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708

Query: 516 NILI 519
           N  I
Sbjct: 709 NFYI 712



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 46/257 (17%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVL 154
           TY  +I  L  +  ++    L Q M+ +    ++  +++   L+  F    RV G  R+L
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDK---GIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M       +   +N ++     EK        +YK M+   +VPN +T N        
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEK-NMKSTTEIYKGMLSQEVVPNENTYN-------- 639

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
                                      I+IKG      + +++    EM + G +L  S 
Sbjct: 640 ---------------------------ILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA----NDIL 330
           Y  +I +L ++ K  EA RLF+ MR   L  +   Y   I+       L+      ++++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732

Query: 331 EDMIVIGLTPTDDVFVD 347
           E  +V  +  TDD F +
Sbjct: 733 EVTLVKSIADTDDDFAE 749


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 219/542 (40%), Gaps = 58/542 (10%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            R+E           +GC P +  + ++I G      +   + +LGEM   GI   +  Y
Sbjct: 95  GRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTY 154

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             II  L R+  L +   L   MRA  L P+   Y  +IN LC+      A+D+L  M+ 
Sbjct: 155 GAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVK 214

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
               P    F  ++ G C  G   E++  L +       P    +  L+   C  G+  +
Sbjct: 215 SRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMV 274

Query: 392 AKCIL-----------------------------------EKMADRKI-ADCDSWNIPIR 415
           A  +L                                   EKMA+R++  D + +N+ I 
Sbjct: 275 ASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLIS 334

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
            LC+   +  A  LL  M+   V PD   Y+  + G  +     DA ++F +   +    
Sbjct: 335 GLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACP 393

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++Y+ +++G C+   + EAV     M K GC     ++  L+ G      +  ++RL 
Sbjct: 394 DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLL 453

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
                        TY  ++ G   +        + A+M  EG   +V  Y +LI S+ ++
Sbjct: 454 CDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKK 513

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGL------------ADGSQLHLVSSGIN-- 641
           +K+   A +F  M+     P+  T+  L++GL            +D  Q H  S+ ++  
Sbjct: 514 DKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVF 573

Query: 642 -KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG-SSV 698
             L+SD      S YN +I  L +  +  +A  L D M  KG +PD  T   LL G SS 
Sbjct: 574 RGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSA 633

Query: 699 GE 700
           GE
Sbjct: 634 GE 635



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 140/611 (22%), Positives = 238/611 (38%), Gaps = 38/611 (6%)

Query: 96  ADTY--CKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV 153
           AD Y  C M+  L L G VEE  GL +    E           L+  +     +   + +
Sbjct: 79  ADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLL 138

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
           L  M + G   +V    V  GAI+     K        +  EM   G+ PNV   N ++ 
Sbjct: 139 LGEMETKGIIPTV----VTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVIN 194

Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
            L +      A D   +M K    P+  TF  +I G      V +++ +L E    G++ 
Sbjct: 195 ALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEP 254

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
               YT +I   C   +   A  L   M      PD +T   LI+ L  + +++DA  + 
Sbjct: 255 NQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVR 314

Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNA 386
           E M    + P  +++  ++ GLC+      + N LE+       P    +  L++    +
Sbjct: 315 EKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRS 374

Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
            K   A+ I E M ++   D  ++N+ I+  C+   +++A   +  M  +  +PD  TY+
Sbjct: 375 DKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYT 434

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             V G  K  +   +LR+   +  +    +  +Y+ L+ G C +     A ++F  M   
Sbjct: 435 TLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSE 494

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY------------SSGTSYTTSTYTKIM 554
           G   +   + +LI  L    K DK I+  + AY             +   Y  +      
Sbjct: 495 GLFPNVVHYTVLIGSLF---KKDKVIQ--AAAYFEHMLLNHCPPNDATVHYLVNGLVNCR 549

Query: 555 LGLVKLQRAKD--------LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
            G+V   R+          LL V   ++ +G    + AY  +I S+   N L       +
Sbjct: 550 HGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKD 609

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            M   G +PD  T LSLL+G +   +     S +       E    + Y  L N      
Sbjct: 610 KMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDEFEIITKYMALFNQHVTSS 669

Query: 667 LTSQASYLLDL 677
           +  + S +L L
Sbjct: 670 VVGEVSRILQL 680



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 151/376 (40%), Gaps = 69/376 (18%)

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           +VRGLC  G+ +E    +E + G          E C     F+                 
Sbjct: 87  MVRGLCLEGRVEEGRGLIEARWG----------EGCVPGAVFY----------------- 119

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
              N+ I   C   +I +   LLG M    ++P   TY A +    +  +      +  +
Sbjct: 120 ---NVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGE 176

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           + A+ L  +   Y+ ++  LC+    ++A ++   M K+  +    +FN +I G C    
Sbjct: 177 MRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD 236

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           V +A++L   A   G      +YT ++ G      A    +V + +LVE           
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEA----MVASDLLVE----------- 281

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
                               M+  G  PD  T+ +L+HGL    Q++       K+    
Sbjct: 282 --------------------MMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE--IDSR 705
            + D+++YN+LI+GL K+ + S A  LL+ ML +   PD   +  L+   V  +   D+R
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381

Query: 706 R-FAF-DSSSFPDSVS 719
           + F F +  + PD V+
Sbjct: 382 KIFEFMEEKACPDIVA 397


>gi|302795027|ref|XP_002979277.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
 gi|300153045|gb|EFJ19685.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
          Length = 570

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 217/499 (43%), Gaps = 51/499 (10%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE---------------------- 312
           Y  ++   C   ++ +A+RL K M+A DL P+E T+ E                      
Sbjct: 5   YNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEEALEHFRSVI 64

Query: 313 ------------LINCLCENLRLDDANDILEDMIV-IGLTPTDDVFVDIVRGLCEVGKFD 359
                       LI+  C+  +L DA ++ E+MIV +G  P+      +V GLC+ G FD
Sbjct: 65  DTSGVDPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAGSFD 124

Query: 360 ESVNFL--------EDKCGYVTSPHNALLECCCNAGKFFLA-KCILEKMADRKIADCDSW 410
           ++V            +      +  NAL++  C AG+   A + + E   D+ + +  ++
Sbjct: 125 KAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGCKDKAMINAVTY 184

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVS-SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
            I I+ LC+++ +     LL  M  S  + PD ATY++ V G C+L   E AL +F  V+
Sbjct: 185 GILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALELFSNVT 244

Query: 470 -AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                  D +    LV GLC+  +  +A+E+   M + GC  SS  + ++I  LC   + 
Sbjct: 245 QGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEA 304

Query: 529 DKAIRLRSLAYSSGTS-YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYC 586
           DKA +L       G +   T TYT I+ GL K  R +     L  +L     A  V   C
Sbjct: 305 DKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSC 364

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            +I  + +  +  +   F   M + G   +     SLL GL   +++    +  +++  D
Sbjct: 365 AIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEM-QD 423

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDS 704
             +     YNIL++G  K     +A  +   M+    +P A T+  L    +  G+  + 
Sbjct: 424 EGLPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRSGKMAED 483

Query: 705 RRFAFDSSSFPDSVSDILA 723
            +FA     FP  +  IL+
Sbjct: 484 YQFADQRDGFPKGLDIILS 502



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 229/550 (41%), Gaps = 68/550 (12%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEIVIKGLIA 249
           KEM    + PN  T   +L+   +  R+E AL+ FR  +   G  P    +  +I G   
Sbjct: 26  KEMKARDLAPNETTHGEILKGFCQIGRMEEALEHFRSVIDTSGVDPA--MYNTLIDGFCK 83

Query: 250 NSRVDDSVSILGEMF-DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM---------- 298
            +++ D+ ++  EM  DLG          ++  LC+    ++A++LF  M          
Sbjct: 84  VAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAGSFDKAVKLFTRMAERTKRNSTM 143

Query: 299 --------------------RALDL---------MPDELTYEELINCLCENLRLDDANDI 329
                                AL+L         M + +TY  LI  LC++ R++D   +
Sbjct: 144 VTLAAANALIDGLCRAGRVDEALELVFEGCKDKAMINAVTYGILIQGLCKSKRVEDGLRL 203

Query: 330 LEDMIVI-GLTPTDDVFVDIVRGLCEVGKFDESVNFLE-----DKCGYVTSPHNALLECC 383
           LE+M    GL P    +  IV G CE+   ++++         +KC         L+   
Sbjct: 204 LEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALELFSNVTQGNKCAPDPVMIGTLVNGL 263

Query: 384 CNAGKFFLAKCILEKMADRKIADCDS--WNIPIRWLCENEEIRKAYELLGRMVVSSVVP- 440
           C +G+   A  +LE+M DR      S  + + I  LC + E  KA +LL   +     P 
Sbjct: 264 CKSGRSLQALELLEEM-DRVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPA 322

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS-KLVEGLCQVEKITEAVEV 499
           +  TY+  V G  K    E A R  + + + SL   S+  S  +++GLC+  + +EA   
Sbjct: 323 NTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWF 382

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M + G   ++  +N L+ GLC   K+ +A+         G   +  TY  ++ G  K
Sbjct: 383 LLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEMQDEGLP-SVVTYNILLDGFCK 441

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           + + ++   V   M+   C      Y  L +  +   K+ +   F +   + G     + 
Sbjct: 442 VVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRSGKMAEDYQFAD--QRDGFPKGLDI 499

Query: 620 MLSLLHGLADGSQL--HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
           +LS L  L  G Q+   +V  G+ KL++          N +I  LWK G+  QA  L   
Sbjct: 500 ILSRLKNLEPGFQVIYMMVDKGLIKLMT---------VNSIIRRLWKAGMGDQADKLAQT 550

Query: 678 MLGKGWVPDA 687
           ++ KG +P A
Sbjct: 551 LVKKGGIPPA 560



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 140/300 (46%), Gaps = 22/300 (7%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+N+ +R  CE  E+ KA  L+  M    + P+  T+   + G C++   E+AL  FR V
Sbjct: 4   SYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEEALEHFRSV 63

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRK 527
              S V D   Y+ L++G C+V K+++A  +   M  + G   S+ + N L+ GLC    
Sbjct: 64  IDTSGV-DPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAGS 122

Query: 528 VDKAI----RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA---- 579
            DKA+    R+      + T  T +    ++ GL +  R  + L    +++ EGC     
Sbjct: 123 FDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEAL----ELVFEGCKDKAM 178

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKA-GLVPDRETMLSLLHGLADGSQLHLVSS 638
           ++   Y ILIQ + +  +++D       M  + GL PD  T  S++ G     +L +V  
Sbjct: 179 INAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFC---ELDMVEQ 235

Query: 639 GI----NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +    N    +    D  M   L+NGL K G + QA  LL+ M   G  P +  + L++
Sbjct: 236 ALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMI 295



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 190/423 (44%), Gaps = 40/423 (9%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE-- 366
           +Y  L+   CE   +  A  ++++M    L P +    +I++G C++G+ +E++      
Sbjct: 4   SYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEEALEHFRSV 63

Query: 367 -DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSW-------NIPIRWLC 418
            D  G   + +N L++  C   K   A  + E+M    I D   W       N  +  LC
Sbjct: 64  IDTSGVDPAMYNTLIDGFCKVAKLSDAFNLAEEM----IVDL-GWMPSAVTCNTLVAGLC 118

Query: 419 ENEEIRKAYELLGRMV----VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           +     KA +L  RM      +S +   A  +A + G C+    ++AL +  +      +
Sbjct: 119 KAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGCKDKAM 178

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKN-GCSLSSSSFNILIYGLCVMRKVDKAIR 533
           +++++Y  L++GLC+ +++ + + +   MS + G +  ++++N ++ G C +  V++A+ 
Sbjct: 179 INAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALE 238

Query: 534 LRSLAYSSGTSYTTSTYTKIML-----GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           L    +S+ T         +M+     GL K  R+   L +L +M   GC    + YC++
Sbjct: 239 L----FSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLM 294

Query: 589 IQSMSEQNKL-KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           I+ +    +  K C L    + K     +  T   ++ GL    +       +  ++S S
Sbjct: 295 IEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSS 354

Query: 648 EVLDSSMYN-ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-------GLLVGSSVG 699
               S + +  +I+GL K G  S+A + L L +G+     A TH       GL   + +G
Sbjct: 355 LSAPSVVTSCAIIDGLCKSGRFSEARWFL-LSMGQ-MGSKANTHIYNSLLGGLCKAAKMG 412

Query: 700 EEI 702
           E +
Sbjct: 413 EAL 415



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 9/292 (3%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETNRIESALDQFR 226
            + +++  + + KR   D + + +EM  + G+ P+  T N ++    E + +E AL+ F 
Sbjct: 183 TYGILIQGLCKSKR-VEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALELFS 241

Query: 227 RMHKKG-CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
            + +   C P+      ++ GL  + R   ++ +L EM  +G Q     Y  +I  LC  
Sbjct: 242 NVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNS 301

Query: 286 NKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT-PTDD 343
            + ++A +L  + +R      +  TY  +++ L +  R + A   L+ ++   L+ P+  
Sbjct: 302 GEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVV 361

Query: 344 VFVDIVRGLCEVGKFDESVNFL--EDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKM 399
               I+ GLC+ G+F E+  FL    + G   + H  N+LL   C A K   A     +M
Sbjct: 362 TSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEM 421

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
            D  +    ++NI +   C+  +I +A  +   MV +  +P   TY     G
Sbjct: 422 QDEGLPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEG 473



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 130/313 (41%), Gaps = 13/313 (4%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI+ L  +  +   L++ + +S  +     A TY  ++        VE+   L  N+ + 
Sbjct: 187 LIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALELFSNVTQG 246

Query: 126 RYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFA 184
                   +I +LV       R   A+ +L  M+  G + S  V+ +++  +        
Sbjct: 247 NKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEADK 306

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG------CCPNSR 238
               +++ + K     N  T   +++ L++T+R E A     R H KG        P+  
Sbjct: 307 ACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKA-----RRHLKGILSSSLSAPSVV 361

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T   +I GL  + R  ++   L  M  +G +     Y  ++  LC+  K+ EA+  F  M
Sbjct: 362 TSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEM 421

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +   L P  +TY  L++  C+ +++++A  +   M+     PT   +  +  G    GK 
Sbjct: 422 QDEGL-PSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRSGKM 480

Query: 359 DESVNFLEDKCGY 371
            E   F + + G+
Sbjct: 481 AEDYQFADQRDGF 493



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 6/189 (3%)

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           S +S+N+L+ G C   +V KA+RL     +   +   +T+ +I+ G  ++ R ++ L   
Sbjct: 1   SVASYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEEALEHF 60

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDC-ALFFNVMVKAGLVPDRETMLSLLHGLAD 629
            + +++   +D   Y  LI    +  KL D   L   ++V  G +P   T  +L+ GL  
Sbjct: 61  -RSVIDTSGVDPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCK 119

Query: 630 GSQ----LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                  + L +    +   +S ++  +  N LI+GL + G   +A  L+        + 
Sbjct: 120 AGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGCKDKAMI 179

Query: 686 DATTHGLLV 694
           +A T+G+L+
Sbjct: 180 NAVTYGILI 188


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 191/412 (46%), Gaps = 42/412 (10%)

Query: 154 LVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           LV   SG +  ++ ++N ++  +    R   D   V ++MV+  IVPNV T   LL  L 
Sbjct: 76  LVRELSGVYTPTLFIYNGIITGLCRASR-VMDAYKVLEKMVEESIVPNVFTYTILLNGLC 134

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
            +N+ + A + F+ M + GC PN  T                                  
Sbjct: 135 RSNKTKLAREVFQEMKRNGCKPNPIT---------------------------------- 160

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            Y  +I  L R  +++EA+R+    R+L+L  D +T   ++  LC+  RLDDA   +E+M
Sbjct: 161 -YGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYV-TSPHNALLECCCNAGK 388
             +G+ P +  + ++V G  + G+ D  + F E+    K G +  + +   L+  C AG 
Sbjct: 220 RQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGY 279

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
              A+  +E++    +  D  ++++ I       +   + ELL  M  + V PD  TYS 
Sbjct: 280 LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYST 339

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +   CK   ++DA R+   + A     + ++Y+ +++GLC+  K+ E   V+  M K+ 
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           CS    +++I++ GL     +D A++L  L  SS      + Y+ ++  L +
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCR 451



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 195/441 (44%), Gaps = 13/441 (2%)

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
           + G++++   +T +   L R +K  E +RLF ++ +  ++  E TY+ +++ LC     +
Sbjct: 12  EAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
            A +++ ++  +  TPT  ++  I+ GLC   +  ++   LE        P    +  LL
Sbjct: 72  QALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130

Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVS 436
              C + K  LA+ + ++M   K   C     ++   I+ L    EI +A  ++      
Sbjct: 131 NGLCRSNKTKLAREVFQEM---KRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            +  D  T +  V G CK    +DAL+   ++    +  + ++YS LV G  Q  ++   
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRV 247

Query: 497 VEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           +  F    ++ G SL ++++   +  LC    +D+A +       SG      TY+ ++ 
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              +  +    L +L  M   G   DV  Y  LI  + ++ K +D      +M  AG  P
Sbjct: 308 TFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  S++ GL    ++  V      ++      D   Y+I++NGL K G+   A  L 
Sbjct: 368 NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
           +L+      PDA  + +++ S
Sbjct: 428 ELIKSSREGPDAAAYSMVITS 448



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/482 (18%), Positives = 202/482 (41%), Gaps = 32/482 (6%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + +V+AG+  +      L   LF  ++    +  F  +  +G      T+++V+ GL   
Sbjct: 8   RSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
              + ++ ++ E+  +     L  Y  II  LCR +++ +A ++ + M    ++P+  TY
Sbjct: 68  GMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTY 126

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             L+N LC + +   A ++ ++M   G  P    +  +++ L   G+ DE++        
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL-------- 178

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
                                 + ++E+ +     D  +    +  LC+   +  A + +
Sbjct: 179 ----------------------RVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFM 216

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA-QSLVLDSISYSKLVEGLCQ 489
             M    V P+  TYS  V G  +    +  +R F +  A +   L++ +Y   ++ LC+
Sbjct: 217 EEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCK 276

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
              +  A +    + ++G      ++++LI       + D ++ L      +G      T
Sbjct: 277 AGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVT 336

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y+ ++  L K ++ +D   +L  M   G   +V  Y  ++  + +  K+ +    + +M+
Sbjct: 337 YSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMML 396

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K+   PD  T   +++GL+    L         + S  E  D++ Y+++I  L + G   
Sbjct: 397 KSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLE 456

Query: 670 QA 671
           +A
Sbjct: 457 EA 458



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 5/179 (2%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M + G+ P+V T + L+ VL +  + + A      M   G  PN  T+  V+ GL  +
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++D+   +   M       ++  Y+ I+  L +   L+ A++LF+++++    PD   Y
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAY 442

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDV---FVDIVRGLCEVGKFDESVNFLE 366
             +I  LC   +L++A  +   M V      D++      +V  LC+  + D +   +E
Sbjct: 443 SMVITSLCRAGKLEEACGMYHGMEVT--VAGDNICRALAGLVAALCDAERTDSARRIVE 499


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 180/368 (48%), Gaps = 6/368 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           G++  +   N +L       R  +D V +  +MV+ G  P+  T   L+  LF  N+   
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNR-ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASE 201

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A+    RM ++GC P+  T+  V+ GL      D ++++L +M    I+  +  Y+ +I 
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            LC+    ++A+ LF  M    + P+ +TY  LI+CLC   R  DA+ +L DMI   + P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               F  ++    + GK  ++    E+       P    +++L+   C   +   AK +L
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381

Query: 397 EKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E M  +  + +  ++N  I   C+ + + K  EL   M    +V +  TY+  + G  + 
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            + ++A  VF+Q+ +  +  + ++Y+ L++GLC+  K+ +A+ VF  + ++       ++
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501

Query: 516 NILIYGLC 523
           NI+I G+C
Sbjct: 502 NIMIEGMC 509



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 191/415 (46%), Gaps = 32/415 (7%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M+K G  P++ TLN LL      NRI  A+    +M + G  P++ TF  +I GL  ++
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           +  ++V+++  M   G Q +L  Y  ++  LC+    + A+ L   M A  +  + + Y 
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            +I+ LC+    DDA ++  +M   G+ P                               
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPN------------------------------ 287

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
               +++L+ C CN G++  A  +L  M +RKI  +  +++  I    +  ++ KA +L 
Sbjct: 288 -VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M+  S+ P+  TYS+ + G C L    +A ++   +  +  + + ++Y+ L+ G C+ 
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
           +++ + +E+F  MS+ G   ++ ++  LI+G    R  D A  +     S G      TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
             ++ GL K  +    +VV   +       D+  Y I+I+ M +  K K   ++F
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 210/473 (44%), Gaps = 41/473 (8%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETNRIESALD 223
           S+  F+ +L AI +  +   D V  + E ++  GI  N+ T N L+      +R+  AL 
Sbjct: 77  SIIEFSKLLSAIAKMNK--FDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
              +M K G  P+  T   ++ G    +R+ D+V+++ +M ++G + +   +T +I  L 
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
             NK  EA+ L   M      PD +TY  ++N LC+    D A ++L  M    +     
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
           ++  ++  LC+    D+++N   +       P    +++L+ C CN G++  A  +L  M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 400 ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
            +RKI                                   P+  T+SA +    K     
Sbjct: 315 IERKIN----------------------------------PNLVTFSALIDAFVKKGKLV 340

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
            A +++ ++  +S+  +  +YS L+ G C ++++ EA ++   M +  C  +  ++N LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C  ++VDK + L       G    T TYT ++ G  + +   +  +V  QM+  G  
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
            ++  Y IL+  + +  KL    + F  + ++ + PD  T   ++ G+    +
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 192/454 (42%), Gaps = 5/454 (1%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           ++ A+  F  M +    P+   F  ++  +   ++ D  +S   +M  LGI   L  Y  
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   CR ++L  A+ L   M  L   PD +T   L+N  C   R+ DA  +++ M+ +G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
             P    F  ++ GL    K  E+V  ++        P    + A++   C  G   LA 
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L KM   KI A+   ++  I  LC+      A  L   M    V P+  TYS+ +   
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C    + DA R+   +  + +  + +++S L++   +  K+ +A +++  M K     + 
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +++ LI G C++ ++ +A ++  L           TY  ++ G  K +R    + +  +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   +   Y  LI    +     +  + F  MV  G+ P+  T   LL GL    +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           L         L   +   D   YNI+I G+ K G
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 1/223 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+    N+ R + A R+L +M       ++  F+ ++ A V++ +       +Y+EM+K
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK-LVKAEKLYEEMIK 351

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
             I PN+ T + L+      +R+  A      M +K C PN  T+  +I G     RVD 
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            + +  EM   G+      YT +I    +    + A  +FK M ++ + P+ LTY  L++
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
            LC+N +L  A  + E +    + P    +  ++ G+C+ GK+
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 1/317 (0%)

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           LL       KF L     EKM    I+ +  ++NI I   C    +  A  LLG+M+   
Sbjct: 84  LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             PD  T ++ + G C      DA+ +  Q+       D+++++ L+ GL    K +EAV
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
            +   M + GC     ++  ++ GLC     D A+ L +   ++        Y+ ++  L
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
            K +   D L +  +M  +G   +V  Y  LI  +    +  D +   + M++  + P+ 
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323

Query: 618 ETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
            T  +L+       +L        +++  S   +   Y+ LING        +A  +L+L
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383

Query: 678 MLGKGWVPDATTHGLLV 694
           M+ K  +P+  T+  L+
Sbjct: 384 MIRKDCLPNVVTYNTLI 400



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 83/168 (49%)

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           ++D AI L  +   S    +   ++K++  + K+ +   ++    +M + G + ++  Y 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           ILI      ++L         M+K G  PD  T+ SLL+G   G+++    + ++++V  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               D+  +  LI+GL+     S+A  L+D M+ +G  PD  T+G +V
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 2/237 (0%)

Query: 459 EDALRVFRQVSAQSLVLDSI-SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           +DA+ +F  V AQS    SI  +SKL+  + ++ K    +     M   G S +  ++NI
Sbjct: 60  DDAIGLF-GVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI   C   ++  A+ L       G      T   ++ G     R  D + ++ QM+  G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
              D   +  LI  +   NK  +     + MV+ G  PD  T  ++++GL       L  
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           + +NK+ +     +  +Y+ +I+ L K      A  L   M  KG  P+  T+  L+
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 121/285 (42%), Gaps = 16/285 (5%)

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           E+  A  L G M  S   P    +S  +    K+  ++  +    ++    +  +  +Y+
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+   C+  +++ A+ +   M K G      + N L+ G C   ++  A+ L       
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G    T T+T ++ GL    +A + + ++ +M+  GC  D+  Y  ++  + ++    D 
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG---DT 234

Query: 602 ALFFNVM-------VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
            L  N++       ++A +V     + SL     +   L+L +   NK V  + +  SS+
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294

Query: 655 YNILIN-GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            + L N G W     S AS LL  M+ +   P+  T   L+ + V
Sbjct: 295 ISCLCNYGRW-----SDASRLLSDMIERKINPNLVTFSALIDAFV 334


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 135/568 (23%), Positives = 255/568 (44%), Gaps = 43/568 (7%)

Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           + RG  DF  +Y++M+ +G++P+V T + +L  L    ++  A    R M+  G  PN  
Sbjct: 248 KHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHV 307

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++  +I  L+ + RV ++ +   +M   GI ++L   T ++  L +  K +EA  +F+ +
Sbjct: 308 SYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTI 367

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
             L+L+P+ +TY  L++  C+   ++ A  +L+ M    + P    F  I+ G  + G  
Sbjct: 368 LKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGML 427

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIP 413
           +++V  L         P    +  LL+     G+   A    ++M    + + +  ++I 
Sbjct: 428 NKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDIL 487

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           +  L  +  +++A  L+  ++   +  D   YS+ + G  K  N   AL V ++++ + +
Sbjct: 488 LNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDM 547

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D ++Y+ L +GL ++ K  E   VF  M + G +    ++N ++    +  K + A+ 
Sbjct: 548 QFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALD 606

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           L +   S G      TY  ++ GL K    + ++ VL +ML  G       +  L+++ S
Sbjct: 607 LLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYS 666

Query: 594 E----------QNKLKDCALFFNVMV---------------KA----------GLVPDRE 618
                        KL D  L  N MV               KA          G+  D  
Sbjct: 667 RSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIV 726

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T  +L+ G   GS +    +  ++++      + + YN L+ GL   GL   A  L+  M
Sbjct: 727 TYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEM 786

Query: 679 LGKGWVPDATTHGLLVGSS--VGEEIDS 704
             +G VP+ATT+ +LV     VG + DS
Sbjct: 787 RERGLVPNATTYNILVSGHGRVGNKRDS 814



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 125/538 (23%), Positives = 225/538 (41%), Gaps = 51/538 (9%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V ++MV+  I+PNV     LL+  F T + E+A   ++ M   G   N+  F+I++  
Sbjct: 431 VEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNN 490

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L  +  + ++ S++ ++   GI L++  Y+ ++    +E     A+ + + M   D+  D
Sbjct: 491 LKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFD 550

Query: 307 ELTYEELINCLCENLRLD--DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            + Y  L   L   LRL   +   +   MI +GLTP    +  ++      GK + +++ 
Sbjct: 551 VVAYNALTKGL---LRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDL 607

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
           L +   Y   P+                                ++NI I  LC+   I 
Sbjct: 608 LNEMKSYGVMPNMV------------------------------TYNILIGGLCKTGAIE 637

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA-LRVFRQVSAQSLVLDSISYSKL 483
           K   +L  M+    VP    +  F+L         DA L++ +++    L L+ + Y+ L
Sbjct: 638 KVISVLHEMLAVGYVPTPIIHK-FLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTL 696

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +  LC++    +A  V   M   G S    ++N LI G C    V+KA    S    SG 
Sbjct: 697 ITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGI 756

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
           S   +TY  ++ GL      +D   ++++M   G   +   Y IL+         +D   
Sbjct: 757 SPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIK 816

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING-- 661
            +  M+  G +P   T   L+   A   ++      +N++++   + +SS Y++LI G  
Sbjct: 817 LYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWC 876

Query: 662 ----------LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRF 707
                     L K    ++A  LL  M  KG VP  +T   +    S+ G+  D++R 
Sbjct: 877 KLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRL 934



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 140/640 (21%), Positives = 240/640 (37%), Gaps = 128/640 (20%)

Query: 182 GFADFVFV-YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR-------------- 226
           GF   V V Y EMV  G+VPNV ++N L+  L +   +  AL   R              
Sbjct: 24  GFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVW 83

Query: 227 ----------------RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
                            M KKG C +S T  I++KG      V  +  I+G +   G+ L
Sbjct: 84  GFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPL 143

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE----------- 319
           +      ++   C    +  A+ L +      + PD +TY  L+N  C+           
Sbjct: 144 DAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVV 203

Query: 320 ----NLRLDDANDILED-----------------------------------------MI 334
                 R DD + +L D                                         MI
Sbjct: 204 NEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMI 263

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
           + G+ P       I+ GLC  GK  E+   L +       P    +  ++     +G+  
Sbjct: 264 MSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVM 323

Query: 391 LAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
            A     +M  R I+ D       +  L +  + ++A E+   ++  ++VP+C TY+A +
Sbjct: 324 EAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALL 383

Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
            G CK+ + E A  V +++  + ++ + +++S ++ G  +   + +AVEV   M +    
Sbjct: 384 DGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIM 443

Query: 510 LSSSSFNILIYGLCVMRKVDKA--------------------IRLRSLAYSSGTSYTTS- 548
            +   + IL+ G     + + A                    I L +L  S G     S 
Sbjct: 444 PNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSL 503

Query: 549 --------------TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                          Y+ +M G  K       L V+ +M  +    DV AY  L + +  
Sbjct: 504 IKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLR 563

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
             K +  ++ F+ M++ GL PD  T  S+++      +       +N++ S   + +   
Sbjct: 564 LGKYEPKSV-FSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVT 622

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           YNILI GL K G   +   +L  ML  G+VP    H  L+
Sbjct: 623 YNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLL 662



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 35/320 (10%)

Query: 140 SFVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           S +N Y + G    A+ +L  M S G   ++  +N+++G + +        + V  EM+ 
Sbjct: 590 SVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTG-AIEKVISVLHEMLA 648

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G VP      +LL+    + + ++ L   +++   G   N   +  +I  L        
Sbjct: 649 VGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKK 708

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L EM   GI  ++  Y  +I   C  + +E+A   +  M    + P+  TY  L+ 
Sbjct: 709 ANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLE 768

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            L  N  + DA+ ++ +M   GL P    +  +V G   VG   +S+             
Sbjct: 769 GLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSI------------- 815

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                            K   E +    I    ++N+ I+   +  ++R+A ELL  M+ 
Sbjct: 816 -----------------KLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLT 858

Query: 436 SSVVPDCATYSAFVLGKCKL 455
              +P+ +TY   + G CKL
Sbjct: 859 RGRIPNSSTYDVLICGWCKL 878


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/548 (22%), Positives = 226/548 (41%), Gaps = 32/548 (5%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  MI  L   G +EE++ + Q M        + +  +L+  +     +  A  +   M 
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421

Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
             G   +   +N +L           D + ++  M+K G+ PN  + + LL+ LF+  + 
Sbjct: 422 RNGLAATTLTYNTLLKGFCS-LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           E AL+ ++    +G   N  TF  VI GL    R+ ++  +L  M +L    +   Y  +
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
               C+  +L  A  L   M  L   P    +   I       +    NDI  +M   GL
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKC 394
           +P    +  ++ G C+ G   E+ N   +      +P+    +AL+ C    GK   A  
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 395 ILEKMAD---------------------RKIADCDS------WNIPIRWLCENEEIRKAY 427
           +L+K+ +                       IAD +       WN+ I  LC++  I  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L   +     +PD  TYS+ + G     + ++A  +   + +  L  + I+Y+ L+ GL
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K++ AV +F  +   G S +  ++N LI   C   K  +A +L+      G   T 
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTV 840

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY+ ++ GL      ++ + +L QM+      +   YC LI    +   +++ +  ++ 
Sbjct: 841 ITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDE 900

Query: 608 MVKAGLVP 615
           M   GL+P
Sbjct: 901 MHIRGLLP 908



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 145/624 (23%), Positives = 254/624 (40%), Gaps = 84/624 (13%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIV 199
           RV  A+  +  M   G ++++  ++ V+      G   + +R       + + + + G+ 
Sbjct: 233 RVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARR-------ILESLQRKGLS 285

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKG-CCPNSRTFEIVIKGLIANSRVDDSVS 258
           PNV T   L++   +  R+E A    + M + G    +   + ++I G     R+DD+  
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           +  EM D GI + L  Y  +I  LC+  ++EE  ++ + M  + + PD+ +Y  LI+  C
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN--FLEDKCGYVTSPH 376
               +  A ++   M+  GL  T   +  +++G C +   D+++   FL  K G   +P+
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG--VAPN 463

Query: 377 ----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
               + LL+    AGK   A  + ++   R +A +  ++N  I  LC+   + +A ELL 
Sbjct: 464 EISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD 523

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALR---------------------------- 463
           RM      PD  TY     G CKL     A                              
Sbjct: 524 RMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAK 583

Query: 464 -------VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-------CS 509
                  +  ++SA+ L  + ++Y  L+ G C+   + EA  ++  M  NG       CS
Sbjct: 584 QWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICS 643

Query: 510 LSSSSF-----------------NILIYGLCVMR--KVDKAIRLRSLAYSSGTSYTTSTY 550
              S F                 NI +   C +   ++DK   +               +
Sbjct: 644 ALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMW 703

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             I+ GL K  R  D   +   +  +    D   Y  LI   +    + +     +VM+ 
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           AGL P+  T  SL++GL    +L    +  NKL S     +   YN LI+   KEG T++
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A  L   M+ +G  P   T+ +L+
Sbjct: 824 AFKLKQKMVEEGIQPTVITYSILI 847



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/510 (21%), Positives = 221/510 (43%), Gaps = 11/510 (2%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F     VY++   + +     + + LL    +  ++ SAL+ F  M K GC P+ R+   
Sbjct: 134 FPHLAEVYRDFTFSAV-----SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           ++  L+ +     +  + G+M   G+  +      +    CR+ ++ +A+   + M  + 
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
           L  + + Y  +++C C     +DA  ILE +   GL+P    +  +V+G C+ G+ +E+ 
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 363 NFLED--KCGYVT---SPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
             +++  + G +      +  ++   C  G+   A  +  +M D  I  +   +N  I  
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+   + +  ++L  M    + PD  +Y+  + G C+  +   A  + R +    L   
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
           +++Y+ L++G C +  I +A+ ++  M K G + +  S + L+ GL    K ++A+ L  
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
              + G +    T+  ++ GL K+ R  +   +L +M    C  D   Y  L     +  
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           +L       N M   G  P  E   S + G     Q H V+   +++ +     +   Y 
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
            LI G  KEG   +A  L   M+  G  P+
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/619 (20%), Positives = 267/619 (43%), Gaps = 40/619 (6%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS-FVNHYRVNGAMRVLVNM 157
           YCK        G +EE E + + M +     V E    ++ + +    R++ A RV   M
Sbjct: 298 YCK-------DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEM 350

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G  +++ V+N ++  + +  R   +   V +EM   G+ P+  + N L++       
Sbjct: 351 RDAGIHVNLFVYNTMINGLCKLGR-MEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           +  A +  R M + G    + T+  ++KG  +   +DD++ +   M   G+       + 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           ++  L +  K E+A+ L+K   A  L  + +T+  +IN LC+  R+ +A ++L+ M  + 
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLAK 393
             P    +  +  G C++G+   + + +   +  G+  S    N+ +     A ++    
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            I  +M+ R ++ +  ++   I   C+   + +A  L   MV + + P+    SA +   
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649

Query: 453 CKLCNYEDALRVFRQV---------SAQSLVLDSIS-----------------YSKLVEG 486
            K    ++A  V +++         S  ++ +D IS                 ++ ++ G
Sbjct: 650 YKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFG 709

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+  +I +A  +F  +        + +++ LI+G      +D+A  LR +  S+G +  
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
             TY  ++ GL K  +    + +  ++  +G + +   Y  LI    ++ K  +      
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
            MV+ G+ P   T   L++GL     +      +++++ ++   +   Y  LI+G  K G
Sbjct: 830 KMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 889

Query: 667 LTSQASYLLDLMLGKGWVP 685
              + S L D M  +G +P
Sbjct: 890 NMEEISKLYDEMHIRGLLP 908



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 88/162 (54%), Gaps = 1/162 (0%)

Query: 182 GFADFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           G  D  F  ++ M+ AG+ PN+ T N L+  L ++ ++  A++ F ++  KG  PN  T+
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             +I       +  ++  +  +M + GIQ  +  Y+ +I  LC +  +EEAI+L   M  
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIE 868

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
            ++ P+ +TY  LI+   ++  +++ + + ++M + GL PT+
Sbjct: 869 NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 146/668 (21%), Positives = 264/668 (39%), Gaps = 91/668 (13%)

Query: 63  PDHLIRVLDNTNDLSS-ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           P   IRVL +       AL+ F+WV  Q  F+ +   +C  IL + L GN         +
Sbjct: 85  PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCA-ILDI-LVGN---------D 133

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           ++   Y  V E ++S        + ++G + VL+                          
Sbjct: 134 LMHAAYW-VMERVVS--------FEMHGVVDVLI-------------------------A 159

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
           G    + V+ +M++ G++P+V   N +L VL + N +  A +                  
Sbjct: 160 GHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKN------------------ 201

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
                            + G M   GI+  +  Y  ++   C+E ++++A+ L   M+  
Sbjct: 202 -----------------VYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQER 244

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
              P+++TY  L+N L +   L+ A  ++E+M+  GL  +   +  ++ G C+ G F E+
Sbjct: 245 GCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEA 304

Query: 362 VNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRW 416
            + +E+       P    +N L+   C   +    +     M   K   D  S+N  +  
Sbjct: 305 FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYG 364

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
            C    I +A+ L   +    +VP   TY+  + G C     + ALR+ ++++ Q L  D
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPD 424

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +Y+ LV G  ++  ++ A   F  M   G      ++N  I G   +     A  ++ 
Sbjct: 425 IFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
              ++G      TY   +  L +    ++   +L  M+ +G   D   Y  +I    +  
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
            L+     FN M+  G+ P   T   L+H  A    L L     +K++  S   +   YN
Sbjct: 545 HLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYN 604

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-----EEIDSRRFAFDS 711
            +INGL       +A    D M  KG +P+  ++ +L+  S       E +   R   D 
Sbjct: 605 AIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664

Query: 712 SSFPDSVS 719
              PDS +
Sbjct: 665 KIQPDSFT 672


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 156/710 (21%), Positives = 283/710 (39%), Gaps = 33/710 (4%)

Query: 10  ISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNL---SPDHL 66
           +S  + ++  L  C +S S ++ +       ++ SH       K  S +  L    PD L
Sbjct: 65  LSRFLFRFSTLPHCAASSSSSSNLESYYANLILSSHGDNQPNRKWSSHQFRLLLTDPDLL 124

Query: 67  IRVLDNTN-DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           IRVL+        A + F W+  Q   + +   +  M            +E L +N +  
Sbjct: 125 IRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAM------------LEILAENDLMS 172

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
               V E  I+L    ++   ++G            F   V +  + L   V  K+  A+
Sbjct: 173 EAYLVAERSINLGMHEIDDLLIDG-----------NFDKLVALKLLDLLLWVYTKKSMAE 221

Query: 186 F-VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
             +  +++M++ G +P+V   N +L VL ++  +  A + +  M   G  P   TF  ++
Sbjct: 222 KCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTML 281

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                   ++    I  EM    I+     Y  +I    +  K+EEA R    M+     
Sbjct: 282 DSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFP 341

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
               ++  LI   C+    D+A  + ++M+  G+ PT   +   +R LCE G+ D++   
Sbjct: 342 VTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAREL 401

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
           L          +N L+       KF  A  + + +    I     ++N  I  LCE+  +
Sbjct: 402 LSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNL 461

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
             A  L   M    + PD  TY+  + G  K  N   A  ++ ++  + +  D  +Y+  
Sbjct: 462 EGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTR 521

Query: 484 VEGLCQVEKITEAVEVFCCM-SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
             G  ++    +A  +   M +++  +   + +N+ I GLC +  ++KAI  +   +  G
Sbjct: 522 TVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVG 581

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 TYT ++ G ++  R K    +  +ML +  +  V  Y +LI   ++  +L+   
Sbjct: 582 LVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAF 641

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
            +   M K G+ P+  T  +LLHG+     +      + K+  +    +   Y ILI+  
Sbjct: 642 QYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKH 701

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSS 712
                  +   L   ML K   PD  TH  L       E D    A DSS
Sbjct: 702 CDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL---EKDHESMALDSS 748


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 214/489 (43%), Gaps = 21/489 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+  +    R+  A+R++ +M           +N VL  +   K+ + +   + +EM++
Sbjct: 192 ALIDGYCRSGRLTDALRLIASMPVAP---DTYTYNTVLKGLCFAKQ-WEEAEELMREMIR 247

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
               PN  T    +    +   ++ A++   +M K GC P+   +  ++ G   + RVDD
Sbjct: 248 NNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDD 307

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L  M     +     Y   +  LC   + +E   L   M   D  P++ T+  LIN
Sbjct: 308 ALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLIN 364

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK-CGYVTS 374
            LC+N   + A ++LE M   G  P    +  I+    E    D+++  L    C   T 
Sbjct: 365 SLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTI 424

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDS----WNIPIRWLCENEEIRKAYELL 430
             NA+L+C C A +++ A  ++ KM      DC +    +NI I  LC+N +++ A E+ 
Sbjct: 425 SFNAVLKCLCRAERWYDAAELMAKMLKE---DCHTNEMTFNILIDSLCQNGQVKDAIEMF 481

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M      PD  TYS+ + G  +    + A  +FR +  ++   D  SY+  ++GLC  
Sbjct: 482 ELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCMA 538

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +  +A E+   M    C  +  +FNILI  LC    V++AI +       G +    TY
Sbjct: 539 ARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTY 598

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ G  +     D L  L+ M    C  D  +Y  +++ +    + KD       M++
Sbjct: 599 NALINGYSEQGCLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLR 655

Query: 611 AGLVPDRET 619
               P+  T
Sbjct: 656 KNCTPNEVT 664



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 211/491 (42%), Gaps = 54/491 (10%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  T+  +I G   + R+ D++ ++  M    +  +   Y  ++  LC   + EEA  L 
Sbjct: 186 NVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCFAKQWEEAEELM 242

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           + M   +  P+E+T+   I   C+N  LD A ++LE M   G  P   ++  +V G  E 
Sbjct: 243 REMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEH 302

Query: 356 GKFDESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIP 413
           G+ D+++  L    C   T  +NA L+  C AG++     ++ +M  +     D +++  
Sbjct: 303 GRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTL 362

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LC+N     A E+L +M     +PD  +Y+  +    +    +DAL++   +  +  
Sbjct: 363 INSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKP- 421

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D+IS++ +++ LC+ E+  +A E+   M K  C  +  +FNILI  LC   +V  AI 
Sbjct: 422 --DTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIE 479

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
                               M  L+   R               C  D+  Y  LI   S
Sbjct: 480 --------------------MFELMPKYR---------------CTPDIVTYSSLINGFS 504

Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSL---LHGLADGSQLHLVSSGINKLVSDSEVL 650
           EQ   K     F  M      P R  + S    L GL   ++       I  +V+   + 
Sbjct: 505 EQGLDKVAFDLFRSM------PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLP 558

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFA 708
           +   +NILIN L ++GL ++A  + + M   G  PD  T+  L+   S  G   D+ +F 
Sbjct: 559 NEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFL 618

Query: 709 FDSSSFPDSVS 719
                 PD++S
Sbjct: 619 STMPCEPDTIS 629



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 189/422 (44%), Gaps = 36/422 (8%)

Query: 114 EMEGLCQNMVKERYPNVREALI------------SLVFSFVNHYRVNGAMRVLVNMNSGG 161
           ++   CQN + +R   + E +             +LV  F  H RV+ A+++L  M    
Sbjct: 260 QIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLC-- 317

Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
            + +   +N  L  +    R + +   +  EMV+    PN  T + L+  L +    E A
Sbjct: 318 -RPNTVCYNAALKGLCIAGR-WDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYA 375

Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
           ++   +M K G  P+  ++  +I      +  DD++ +L  M     + +   +  ++  
Sbjct: 376 IEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKC 432

Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           LCR  +  +A  L   M   D   +E+T+  LI+ LC+N ++ DA ++ E M     TP 
Sbjct: 433 LCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPD 492

Query: 342 DDVFVDIVRGLCEVG----KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
              +  ++ G  E G     FD    F    C      +NA L+  C A ++  A    E
Sbjct: 493 IVTYSSLINGFSEQGLDKVAFDL---FRSMPCRADIFSYNATLKGLCMAARWDDAG---E 546

Query: 398 KMADRKIADC----DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            +AD    DC     ++NI I  LC+   + +A E+  +M    + PD  TY+A + G  
Sbjct: 547 LIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYS 606

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           +    +DAL+    +  +    D+ISY+ +++GLC+ E+  +A ++   M +  C+ +  
Sbjct: 607 EQGCLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEV 663

Query: 514 SF 515
           +F
Sbjct: 664 TF 665



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 23/349 (6%)

Query: 106 LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
           L +AG  +E+  L   MV++  P       +L+ S   +     A+ VL  M   G+   
Sbjct: 331 LCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPD 390

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           V  +N ++    E+         +   + K    P+  + N +L+ L    R   A +  
Sbjct: 391 VVSYNTIISCFSEQACADDALKLLNSMLCK----PDTISFNAVLKCLCRAERWYDAAELM 446

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
            +M K+ C  N  TF I+I  L  N +V D++ +   M       ++  Y+ +I     E
Sbjct: 447 AKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGF-SE 505

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             L++    F + R++    D  +Y   +  LC   R DDA +++ DM+     P +  F
Sbjct: 506 QGLDKVA--FDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTF 563

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL-----ECCCNAGKFFLAKCIL 396
             ++  LC+ G  + ++   E    Y  +P    +NAL+     + C +    FL+    
Sbjct: 564 NILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPC 623

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           E        D  S+N  ++ LC  E  + A +L+  M+  +  P+  T+
Sbjct: 624 EP-------DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 13/206 (6%)

Query: 115 MEGLCQN-MVK------ERYPNVR-EALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLS 165
           ++ LCQN  VK      E  P  R    I    S +N +   G  +V  ++  S   +  
Sbjct: 465 IDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRAD 524

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           +  +N  L  +    R + D   +  +MV    +PN  T N L+  L +   +  A++ +
Sbjct: 525 IFSYNATLKGLCMAAR-WDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVY 583

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
            +M K G  P+  T+  +I G      +DD++  L  M     + +   Y  I+  LCR 
Sbjct: 584 EQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCEPDTISYNSILKGLCRA 640

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYE 311
            + ++A +L   M   +  P+E+T++
Sbjct: 641 ERWKDAEKLVTEMLRKNCTPNEVTFK 666


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 223/487 (45%), Gaps = 16/487 (3%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           GI P+ ++ N +L  L     ++ A+  F+ + +K  C    ++ I++K L    R+ D+
Sbjct: 221 GISPSPESCNAVLCRL----PLDEAVQLFQELPEKNTC----SYNILLKALCTAGRIKDA 272

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +  EM       ++  Y  ++   C  ++LE AI+L   M A  L  + + Y  +I  
Sbjct: 273 HQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTS 374
           LC+  ++ DA  ++EDM++ G+     VF  ++ G C  G    + N+ ++  K G    
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389

Query: 375 --PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLG 431
              + AL+   C AG+   A+ +L++M D+ +  D  ++ + I   C+  ++ +A+ +  
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           +MV   V P+  TY+A   G CK  +   A  +  ++ ++ L L+  +Y+ L+ GLC+  
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + +A+     M + G      ++  +I  LC  +++D+A  L       G   T  TY 
Sbjct: 510 NLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYN 569

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            +M G     R +    +L  ML +    +   Y  L++    +  +K     +  M+  
Sbjct: 570 VLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629

Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
            +VP+  T   L+ G      +       ++++     L +S YN LI  L K+   ++A
Sbjct: 630 EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689

Query: 672 SYLLDLM 678
             L + M
Sbjct: 690 RRLFEKM 696



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 208/442 (47%), Gaps = 9/442 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           +Y  ++  L  AG +++   L   M     P+V    I +V  +     +  A+++L  M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP--PDVVTYGI-MVHGYCTLSELETAIKLLSEM 311

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
            + G +L+   +  V+  + +E +  +D V V ++MV  G+V +      ++        
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQ-VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           + +A + F  M K+G   +  T+  +I GL     + ++  +L EM D G+ ++   YT 
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C+  K+ EA  +   M    + P+ +TY  L + LC+   +  AN++L +M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
           L      +  ++ GLC+ G  ++++  + D       P    +  ++   C + +   A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 394 CILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            +L++M D+ I     ++N+ +   C +  +     LL  M+  ++ P+  TY++ +   
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C   N +    +++ + +Q +V +  +Y+ L++G C+   + EA+     M + G  L++
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA 670

Query: 513 SSFNILIYGLCVMRKVDKAIRL 534
           SS+N LI  L   +K  +A RL
Sbjct: 671 SSYNALIRLLNKKKKFTEARRL 692



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 70/424 (16%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-------------- 178
           A  S++    +  +V+ A+RV+ +M   G  L   VF  V+                   
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 179 EKRGFADFVFVY--------------------KEMVKAGIVPNVDTLNY--LLEVLFETN 216
           +KRG A     Y                    +EM   G+  +VD + Y  L++   +  
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL--DVDAVTYTVLIDGYCKVG 439

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           ++  A     +M +K   PN  T+  +  GL     V  +  +L EM   G++L +  Y 
Sbjct: 440 KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYN 499

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC+   LE+A+R    M    L PD  TY  +I  LC++  LD A+ +L++M+  
Sbjct: 500 SLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G+ PT                              VT  +N L+   C +G+    K +L
Sbjct: 560 GIKPT-----------------------------IVT--YNVLMNGFCMSGRVEGGKRLL 588

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           E M ++ I  +  ++N  ++  C  + ++   E+   M+   VVP+  TY+  + G CK 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N ++AL    ++  +   L + SY+ L+  L + +K TEA  +F  M K+  +     +
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVY 708

Query: 516 NILI 519
           N  I
Sbjct: 709 NFYI 712



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 195/457 (42%), Gaps = 54/457 (11%)

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELT--YEELINCLCENLRLDDANDILEDMIVIGL 338
           +LCR   L+EA++LF+ +      P++ T  Y  L+  LC   R+ DA+ + ++M     
Sbjct: 232 VLCRL-PLDEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEMA---- 280

Query: 339 TPTDDVFVDI-VRGLCEVGKFDESVNFLEDKC--GYVTSP--HNALLECCCNAGKFFLAK 393
           +P D V   I V G C + + + ++  L +    G   +P  + +++   C+ G+   A 
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340

Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            ++E M    +  D   +   +   C   ++  A      M    +  D  TY+A + G 
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGL 400

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV--------------- 497
           C+    ++A RV +++  + L +D+++Y+ L++G C+V K+TEA                
Sbjct: 401 CRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNV 460

Query: 498 --------------------EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
                               E+   M   G  L+  ++N LI GLC    +++A+R    
Sbjct: 461 VTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMID 520

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              +G      TYT I+  L + +       +L +ML +G    +  Y +L+       +
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           ++        M++  + P+  T  SL+        +   +     ++S   V + + YNI
Sbjct: 581 VEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNI 640

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           LI G  K     +A Y    M+ KG+   A+++  L+
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 101/262 (38%), Gaps = 56/262 (21%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVNGAMRVL 154
           TY  +I  L  +  ++    L Q M+ +    ++  +++   L+  F    RV G  R+L
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDK---GIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 155 VNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
             M       +   +N ++     EK        +YK M+   +VPN +T N        
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEK-NMKSTTEIYKGMLSQEVVPNENTYN-------- 639

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
                                      I+IKG      + +++    EM + G +L  S 
Sbjct: 640 ---------------------------ILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN------- 327
           Y  +I +L ++ K  EA RLF+ MR      D LT E  +     +L  ++ N       
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRK-----DRLTAEPDVYNFYIDLSFNEDNLESTLAL 727

Query: 328 --DILEDMIVIGLTPTDDVFVD 347
             +++E  +V  +  TDD F +
Sbjct: 728 CDELVEVTLVKSIADTDDDFAE 749


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 200/438 (45%), Gaps = 41/438 (9%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+  ++ T N L+    ++++   A     +M K G  P+  TF  +I G    +R++++
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +S++ +M ++GI+ ++  YT II  LC+   +  A+ LF  M    + PD + Y  L+N 
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
           LC + R  DA+ +L  M    + P    F                               
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITF------------------------------- 250

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           NAL++     GKF  A+ +  +M    IA +  ++   I   C    + +A ++   M  
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD   Y++ + G CK    +DA+++F ++S + L  ++I+Y+ L++G  QV K   
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL------RSLAYSSGTSYTTST 549
           A EVF  M   G   +  ++N+L++ LC   KV KA+ +      R +    G +    T
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM---DGVAPNIWT 427

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ GL    + +  L+V   M      + +  Y I+IQ M +  K+K+    F  + 
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487

Query: 610 KAGLVPDRETMLSLLHGL 627
             G+ P+  T  +++ GL
Sbjct: 488 SKGVKPNVVTYTTMISGL 505



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/490 (22%), Positives = 206/490 (42%), Gaps = 51/490 (10%)

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           +   ALD F  M +    P+   F  ++  +    + D  +++   +  +G+  +L  YT
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDL--YT 109

Query: 277 CIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           C + M   C+ ++   A      M  L   PD +T+  LIN  C   R+++A  ++  M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
            +G+ P   ++  I+  LC+ G  + +++  +    Y   P    + +L+   CN+G   
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG--- 226

Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
                                   RW       R A  LL  M    + PD  T++A + 
Sbjct: 227 ------------------------RW-------RDADSLLRGMTKRKIKPDVITFNALID 255

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
              K   + DA  ++ ++   S+  +  +Y+ L+ G C    + EA ++F  M   GC  
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
              ++  LI G C  +KVD A+++       G +  T TYT ++ G  ++ +      V 
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA---GLVPDRETMLSLLHGL 627
           + M+  G   ++  Y +L+  +    K+K   + F  M K    G+ P+  T   LLHGL
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435

Query: 628 ADGSQLH---LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
               +L    +V   + K   D  ++  +   I+I G+ K G    A  L   +  KG  
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYT---IIIQGMCKAGKVKNAVNLFCSLPSKGVK 492

Query: 685 PDATTHGLLV 694
           P+  T+  ++
Sbjct: 493 PNVVTYTTMI 502



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 181/396 (45%), Gaps = 8/396 (2%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M+K G  P++ T   L+      NR+E A+    +M + G  P+   +  +I  L  N 
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
            V+ ++S+  +M + GI+ ++  YT ++  LC   +  +A  L + M    + PD +T+ 
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN---FLEDK 368
            LI+   +  +  DA ++  +MI + + P    +  ++ G C  G  DE+      +E K
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311

Query: 369 -CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
            C      + +L+   C   K   A  I  +M+ + +  +  ++   I+   +  +   A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL--VLDSI-SYSKL 483
            E+   MV   V P+  TY+  +   C     + AL +F  +  + +  V  +I +Y+ L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           + GLC   K+ +A+ VF  M K    +   ++ I+I G+C   KV  A+ L     S G 
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
                TYT ++ GL +     +  V+  +M  +G +
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 112/302 (37%), Gaps = 13/302 (4%)

Query: 403 KIADCDSWNIPIRWLCENEEI----------RKAYELLGRMVVSSVVPDCATYSAFVLGK 452
           ++ D   W   +R  C   EI           +A +L   MV S  +P    ++  +   
Sbjct: 26  RLLDLSFW---VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVI 82

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
            K+  ++  + +   +    +  D  + + L+   CQ  +   A      M K G     
Sbjct: 83  AKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDI 142

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +F  LI G C+  ++++A+ + +     G       YT I+  L K       L +  Q
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   DV  Y  L+  +    + +D       M K  + PD  T  +L+       +
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
                   N+++  S   +   Y  LING   EG   +A  +  LM  KG  PD   +  
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322

Query: 693 LV 694
           L+
Sbjct: 323 LI 324


>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 177/735 (24%), Positives = 290/735 (39%), Gaps = 110/735 (14%)

Query: 36  SSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHT 95
           +SET   K   ++ +      +   L   HL R     N+ S AL  F  +  Q  F H 
Sbjct: 45  TSETHFTKPSNSSSFHPNTSQILQKL---HLYR-----NNPSLALSHFSELKNQHGFSHN 96

Query: 96  ADTYCKMILKLGLAGNVEEMEGLC---------QNMVKERYPNVREALISLVFSFVNHYR 146
             TY  +I  L        ++ L          QN + E +    + L  +     NHY 
Sbjct: 97  IQTYVAIIRILCYWNLNRRLDSLFRDIIISHSKQNPLFEIHDLFEKLLEGVNVKDKNHY- 155

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
               +R  V     GF  +    N+   AI        DF+F++ ++ + GI+PN+   N
Sbjct: 156 ---LLRAFV-----GFVKACVGLNMFDDAI--------DFMFMF-QIRRFGILPNIFACN 198

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK--------------------- 245
           +L+  L + +++  A + F R+   G CPN  T+ I+IK                     
Sbjct: 199 FLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKE 258

Query: 246 ---------------GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
                          GL  N + D    +L  + +    +++  YT +I   C E KL++
Sbjct: 259 AGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDK 318

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+++F  M    L+PD   Y  LI   C+   L  A D+ EDMI+ G+     +   I+ 
Sbjct: 319 AMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILH 378

Query: 351 GLCEVGKFDESVN-FLEDKCGYV---TSPHNALLECCCNAGKFFLAKCILEKMADRKIA- 405
              E+G+    V+ F E K   V      +N + +     GK      +LE +    I  
Sbjct: 379 CFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDF 438

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D   +   I+  C   +  KAY +   M      PD   Y+    G C   +  +A+ + 
Sbjct: 439 DIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLL 498

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
             + +Q +  +S ++  ++EG C   KI EA   F  M      +    +  ++ G C  
Sbjct: 499 NYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEI----YTAMVSGYCEA 554

Query: 526 RKVDKAIRLRSLAYSSGTSYTTST---------YTKIMLGLVK---LQRAKDLLVVLAQM 573
             ++K+  L     + G +   S+         Y+K++  L +   +QRA+ L       
Sbjct: 555 DLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFF--- 611

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG--S 631
           L  G   DV  Y I+I+S    N L++    F  M   G+ PD  T   LL G +    S
Sbjct: 612 LGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARS 671

Query: 632 QLHLVS------------SGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLM 678
           + H  S            S I + + D EV  D  +Y +LI+G  K      A  L + +
Sbjct: 672 KEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEV 731

Query: 679 LGKGWVPDATTHGLL 693
           + +G  PD  T+  L
Sbjct: 732 MKRGLEPDNVTYTAL 746



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 113/558 (20%), Positives = 225/558 (40%), Gaps = 39/558 (6%)

Query: 53  KIQSLRHNLSPDH-----LIRVLDNTN-DLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           +I+SL   L P+H     +I+ L     DL  A  +F  +   K    T ++YC      
Sbjct: 219 RIKSL--GLCPNHHTYAIIIKALGTKGGDLKQASGVFDEM---KEAGVTPNSYCYAAYIE 273

Query: 107 GLAGNVEEMEG--LCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
           GL  N +   G  L + + +   P    A  +++  F N  +++ AM+V  +M       
Sbjct: 274 GLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVP 333

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
              V++ ++    +        + +Y++M+  GI  N   ++ +L    E       +D 
Sbjct: 334 DCHVYSSLICGYCK-THDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDT 392

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
           F+ + + G   +   + IV   L    ++D+   +L ++  + I  ++  YT  I   C 
Sbjct: 393 FKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCL 452

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           + K ++A  +FK M      PD + Y  L   LC N  + +A D+L  M   G+ P    
Sbjct: 453 QGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTT 512

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
              I+ G C  GK +E+  +           + A++   C A     +  +  ++++R  
Sbjct: 513 HKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYTAMVSGYCEADLIEKSYELFHELSNRGD 572

Query: 405 ADCDS----------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
              +S          ++  +  LC+   +++A  L    +     PD  TY+  +   C 
Sbjct: 573 TAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCT 632

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE---------------V 499
           +   ++A  +F+ + ++ +  D I+Y+ L++G  +  +  E                  +
Sbjct: 633 MNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTI 692

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           +  M     S     + +LI G   +   + AIRL +     G      TYT +  GL+ 
Sbjct: 693 WRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLN 752

Query: 560 LQRAKDLLVVLAQMLVEG 577
              ++  + +  +M  +G
Sbjct: 753 SGNSEIAVTLYNEMSSKG 770



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/480 (21%), Positives = 200/480 (41%), Gaps = 29/480 (6%)

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYTCIIPMLCRENKLEEAIRL 294
           R F   +K  +  +  DD++  +  MF +   GI   +     +I  L + +++  A  +
Sbjct: 158 RAFVGFVKACVGLNMFDDAIDFMF-MFQIRRFGILPNIFACNFLINRLVKCDQVNMAFEI 216

Query: 295 FKMMRALDLMPDELTYEELINCL-CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
           F  +++L L P+  TY  +I  L  +   L  A+ + ++M   G+TP    +   + GLC
Sbjct: 217 FDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLC 276

Query: 354 EVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA-DRKIADCD 408
              + D   + L    E+        + A++   CN  K   A  +   M   R + DC 
Sbjct: 277 NNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCH 336

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
            ++  I   C+  ++ KA +L   M++  +  +C   S  +    ++      +  F++V
Sbjct: 337 VYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEV 396

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
               + LD ++Y+ + + L ++ K+ E   +   +           +   I G C+  K 
Sbjct: 397 KQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKP 456

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           DKA  +       G       Y  +  GL   +   + + +L  M  +G   +   + I+
Sbjct: 457 DKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKII 516

Query: 589 IQSMSEQNKLKDCALFFNVM------VKAGLVPDR------ETMLSLLHGLADGSQLHLV 636
           I+    + K+++   +FN M      +   +V         E    L H L++       
Sbjct: 517 IEGFCSEGKIEEAEGYFNSMKDESVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQE 576

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           SS + +L   S+VL    Y+ ++  L ++G   +A  L D  LG+G+ PD  T+ +++ S
Sbjct: 577 SSCLKQL---SKVL----YSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKS 629



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/327 (20%), Positives = 127/327 (38%), Gaps = 57/327 (17%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++KEM + G  P+V   N L   L     +  A+D    M  +G  PNS T +I+I+G  
Sbjct: 462 IFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFC 521

Query: 249 ANSRVDDSVSILGEMFDLGIQL----------------------ELS------------- 273
           +  +++++      M D  +++                      ELS             
Sbjct: 522 SEGKIEEAEGYFNSMKDESVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLK 581

Query: 274 -----FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
                 Y+ ++  LC++  ++ A  LF         PD +TY  +I   C    L +A+D
Sbjct: 582 QLSKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHD 641

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
           + +DM   G+ P    +  ++ G  +  +  E          + +S H    +   +   
Sbjct: 642 LFQDMKSRGIKPDVITYTVLLDGKSKQARSKE----------HFSSQHGKGKDAPYDVS- 690

Query: 389 FFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                 I   M DR+++ D   + + I    + +    A  L   ++   + PD  TY+A
Sbjct: 691 -----TIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTA 745

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLV 474
              G     N E A+ ++ ++S++ + 
Sbjct: 746 LFSGLLNSGNSEIAVTLYNEMSSKGMT 772



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 175/435 (40%), Gaps = 30/435 (6%)

Query: 309 TYEELINCLCE---NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           TY  +I  LC    N RLD    +  D I+I  +  + +F   +  L E  K  E VN +
Sbjct: 99  TYVAIIRILCYWNLNRRLDS---LFRD-IIISHSKQNPLFE--IHDLFE--KLLEGVN-V 149

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK---IADCDSWNIPIRWLCENEE 422
           +DK  Y+       ++ C     F  A   +     R+   + +  + N  I  L + ++
Sbjct: 150 KDKNHYLLRAFVGFVKACVGLNMFDDAIDFMFMFQIRRFGILPNIFACNFLINRLVKCDQ 209

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFV--LGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           +  A+E+  R+    + P+  TY+  +  LG  K  + + A  VF ++    +  +S  Y
Sbjct: 210 VNMAFEIFDRIKSLGLCPNHHTYAIIIKALG-TKGGDLKQASGVFDEMKEAGVTPNSYCY 268

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           +  +EGLC   +     ++   + +N   +   ++  +I G C   K+DKA+++      
Sbjct: 269 AAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEW 328

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD-VEAYCIL--IQSMSEQNK 597
                    Y+ ++ G  K       L +   M+++G   + V   CIL     M E ++
Sbjct: 329 QRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSR 388

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           + D    F  + ++G+  D      +   L    ++  V+  +  L S     D   Y  
Sbjct: 389 VVDT---FKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTT 445

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-----SVGEEIDSRRFAFDSS 712
            I G   +G   +A  +   M  KG+ PD   + +L         V E +D   +     
Sbjct: 446 FIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQG 505

Query: 713 SFPDSVSD-ILAEGL 726
             P+S +  I+ EG 
Sbjct: 506 VKPNSTTHKIIIEGF 520



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 15/159 (9%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G  P+V T   +++     N ++ A D F+ M  +G  P+  T+ +++ G    +R  + 
Sbjct: 615 GFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEH 674

Query: 257 VS---------------ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            S               I  +M D  +  ++  YT +I    + +  E+AIRLF  +   
Sbjct: 675 FSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKR 734

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
            L PD +TY  L + L  +   + A  +  +M   G+TP
Sbjct: 735 GLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTP 773


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/504 (21%), Positives = 215/504 (42%), Gaps = 13/504 (2%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIV--PNVDTLN 206
           A+ V   +   G ++S+   N +L   +  K G  + +F  Y+EM+KAG     N +T+ 
Sbjct: 175 AIEVYFQLKEAGIRISIVACNSILSGCL--KAGKTELLFEFYQEMIKAGTASDANTETVG 232

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L++   ++ ++    +   +  K G  P + T+  +I G            +L  M   
Sbjct: 233 CLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIAR 292

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
                +  Y  II  LC+  +  EA R+F  ++     PD + Y  +I+ LCE     +A
Sbjct: 293 NHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEA 352

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC----GYVTSPHNALLEC 382
             +  +M+  G+ P    +  ++ G  + G F+ +     + C    G  T   N ++  
Sbjct: 353 RKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISE 412

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C+ GK   A  + +KM++  I AD  ++N  IR  C+  ++ +   LL  +V     P 
Sbjct: 413 LCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPS 472

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
            + Y   ++  CK  ++E A R+   +S++ L  ++ +Y  ++ G  +        E++ 
Sbjct: 473 VSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYN 532

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
                G   ++++ N +I  LC   K D+A  +      +G      TY  ++ G  K  
Sbjct: 533 ETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEG 592

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
           +    + +L +++ +G      +Y  LI  + +    +     +  MV  G+ P      
Sbjct: 593 KVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLRE 652

Query: 622 SLLHGLADGSQLHLVSSGINKLVS 645
            L+ GL    +    + G+++L+ 
Sbjct: 653 HLISGLCKQGR---ATEGMDRLMG 673



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 187/426 (43%), Gaps = 6/426 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY K+I     A N   M  +   M+   +         ++     +     A RV  ++
Sbjct: 265 TYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL 324

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G+     ++  ++  + E    F +   ++ EM+  G+ PN  T N +L    ++  
Sbjct: 325 KDRGYAPDRVMYTTMIHGLCE-MGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGD 383

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            E A + +  M  KG    + T   +I  L +  + D++  +  +M + GIQ +   Y  
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNS 443

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +I   C+E K++E + L   + A D  P    YE LI   C++   + A  +L DM   G
Sbjct: 444 LIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC----GYVTSPHNALLECCCNAGKFFLAK 393
           L P    +  ++ G  + G F+       + C    G  T+  N ++   C+ GK   A 
Sbjct: 504 LHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEAS 563

Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
            + +KM++  I AD  ++N  IR  C+  ++ K+  LL  +V   + P  ++Y++ ++  
Sbjct: 564 EMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQL 623

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+  + E A R++  + ++ +   +     L+ GLC+  + TE ++    M +N      
Sbjct: 624 CQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKK 683

Query: 513 SSFNIL 518
           ++F  L
Sbjct: 684 AAFEDL 689



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 105/499 (21%), Positives = 205/499 (41%), Gaps = 10/499 (2%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC--PNSRTFEIVIKG 246
           VY ++ +AGI  ++   N +L    +  + E   + ++ M K G     N+ T   +I+ 
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQA 237

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              + +V     +L +    G+      Y  +I   C+         +   M A + +P 
Sbjct: 238 FCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPT 297

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             TY+E+IN LC+N    +A  +  D+   G  P   ++  ++ GLCE+G F E+     
Sbjct: 298 IYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWF 357

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENE 421
           +       P    +N +L     +G F  A  +  +M ++       + N  I  LC   
Sbjct: 358 EMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRG 417

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           +  +A+E+  +M  + +  D  TY++ + G CK    ++ + +  ++ AQ        Y 
Sbjct: 418 KSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYE 477

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+   C+      A  +   MS  G   ++ +++ +++G       +    L +   + 
Sbjct: 478 LLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNK 537

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G   TT+T  KI+  L    ++ +   +  +M   G   D   Y  LI+   ++ K+   
Sbjct: 538 GYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKS 597

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
               N +V  GL P   +  SL+  L               +VS      +++   LI+G
Sbjct: 598 MNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISG 657

Query: 662 LWKEGLTSQASYLLDLMLG 680
           L K+G  ++    +D ++G
Sbjct: 658 LCKQGRATEG---MDRLMG 673



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 184/432 (42%), Gaps = 16/432 (3%)

Query: 280 PMLCRE-----NKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
           P+  RE     N +  ++R F+ +    D  PD ++   L   L +   +  A  + +  
Sbjct: 91  PLFFRELVATQNNVLLSLRFFQWLCTNHDCTPDPISSNMLFEALLDAKAVRAAKMVRD-- 148

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVN--FLEDKCGYVTS--PHNALLECCCNAGKF 389
            + G  P        V+ LC VG  +E++   F   + G   S    N++L  C  AGK 
Sbjct: 149 -IAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKT 207

Query: 390 FLAKCILEKMADRKIA-DCDSWNIP--IRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
            L     ++M     A D ++  +   I+  C++ ++ + YELL + + + + P   TY+
Sbjct: 208 ELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYN 267

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             + G C+  NY     V   + A++ +    +Y +++ GLC+ E+  EA  VF  +   
Sbjct: 268 KLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDR 327

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G +     +  +I+GLC M    +A +L       G      TY  ++ G +K    +  
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
             +  +M  +G          +I  +  + K  +    F  M + G+  D  T  SL+ G
Sbjct: 388 CELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRG 447

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                ++    + +N+LV+       S+Y +LI    K+G    A  LL  M  KG  P+
Sbjct: 448 FCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPN 507

Query: 687 ATTHGLLVGSSV 698
           A T+  ++  S+
Sbjct: 508 AYTYDTMLHGSL 519



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/537 (18%), Positives = 216/537 (40%), Gaps = 78/537 (14%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHK--KGCCPNSRTFEIVIKGLIANSRVDDS 256
            P+  + N L E L +   + +A     +M +   G  P+S + E  +K L     ++++
Sbjct: 121 TPDPISSNMLFEALLDAKAVRAA-----KMVRDIAGFIPDSASLEQYVKCLCGVGFIEEA 175

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + +  ++ + GI++ +     I+    +  K E     ++ M       D  T  E + C
Sbjct: 176 IEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANT--ETVGC 233

Query: 317 L----CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L    C++ ++    ++L   +  GL P +  +  ++ G C+   +              
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYAS------------ 281

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
                             +++ +   +A   +    ++   I  LC+NEE  +AY +   
Sbjct: 282 ------------------MSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFND 323

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +      PD   Y+  + G C++ ++ +A +++ ++  + +  ++ +Y+ ++ G  +   
Sbjct: 324 LKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGD 383

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
              A E++  M   G   ++ + N +I  LC   K D+A  +      +G      TY  
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNS 443

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K  +  + + +L +++ +     V  Y +LI    +    +        M   G
Sbjct: 444 LIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503

Query: 613 LVPDRETMLSLLHG-LADGSQLHL--------------VSSGINKLVSD----------S 647
           L P+  T  ++LHG L  G   H+               ++  NK++S+          S
Sbjct: 504 LHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEAS 563

Query: 648 EVL----------DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           E+           D+  YN LI G  KEG   ++  LL+ ++ +G  P A+++  L+
Sbjct: 564 EMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLI 620



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 10/275 (3%)

Query: 79  ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISL- 137
           A ++FK +S +   Q  A TY  +I      G V+E   L   +V +  P    +L  L 
Sbjct: 422 AFEVFKKMS-ETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQD-PQPSVSLYELL 479

Query: 138 VFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFV---YKEMV 194
           +           A R+L +M+S G   +   ++ +L   ++      DF  V   Y E  
Sbjct: 480 IIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKS----GDFEHVRELYNETC 535

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G      T N ++  L    + + A + F++M + G   ++ T+  +I+G     +V 
Sbjct: 536 NKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVG 595

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
            S+++L E+   G+Q   S Y  +I  LC+    E A RL+  M +  + P     E LI
Sbjct: 596 KSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLI 655

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           + LC+  R  +  D L  M+   + P    F D+ 
Sbjct: 656 SGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLA 690


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 158/746 (21%), Positives = 282/746 (37%), Gaps = 96/746 (12%)

Query: 54  IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
           ++  R  LS   +I VL      S+ +  F W   Q  ++HT+  Y  ++  +    + +
Sbjct: 123 LRQFREKLSESLVIEVLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEK 182

Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
             E L Q +  +      E L  LV  +      + A+  L  +    F+ S   +N ++
Sbjct: 183 VPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLI 242

Query: 174 GAIVE-------------------EKRGFADFVFVYKEMVKAG-------------IVPN 201
            A ++                      GF    + Y  + K G              VP+
Sbjct: 243 QAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYS-LCKVGKWREALTLMETENFVPD 301

Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
                 L+  L E +  E A+D   RM    C PN  T+  ++ G +   ++     +L 
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361

Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
            M   G       +  ++   C       A +L K M      P  + Y  LI  +C + 
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDK 421

Query: 322 R------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV--- 372
                  L+ A     +M+  G+           R LC  GK++++ + + +  G     
Sbjct: 422 DSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481

Query: 373 -TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN---EEIRK-- 425
            TS ++ +L   CNA K  LA  + E+M     +AD  ++ I +   C+    E+ RK  
Sbjct: 482 DTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541

Query: 426 ------------------------------AYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
                                         A EL   M+    +P+  TYSA + G CK 
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601

Query: 456 CNYEDALRVFRQVSAQSLVLDS-----------------ISYSKLVEGLCQVEKITEAVE 498
              E A ++F ++     V D                  + Y  L++G C++ ++ EA +
Sbjct: 602 GQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARK 661

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   MS  GC  +   ++ LI GLC + K+D+A  +++     G   T  TY+ ++    
Sbjct: 662 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYF 721

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K++R      VL++ML   CA +V  Y  +I  + +  K  +      +M + G  P+  
Sbjct: 722 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 781

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T  +++ G     ++      + ++ S     +   Y +LI+   K G    A  LL+ M
Sbjct: 782 TYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 841

Query: 679 LGKGWVPDATTHGLLVGSSVGEEIDS 704
               W   A  +  ++     E I+S
Sbjct: 842 KQTHWPTHAAGYRKVIEGFNKEFIES 867



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 128/578 (22%), Positives = 247/578 (42%), Gaps = 56/578 (9%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
           M++  YP+ +    SLV ++      + A ++L  M   G      V+N+++G+I  +K 
Sbjct: 364 MMEGCYPSPK-IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD 422

Query: 182 GFADFVF-----VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
             +  +       Y EM+  G+V N   ++     L    + E A    R M  +G  P+
Sbjct: 423 SLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           + T+  V+  L   S+++ +  +  EM   G+  ++  YT ++   C+   +E+A + F 
Sbjct: 483 TSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            MR +   P+ +TY  LI+   +  ++  AN++ E M+  G  P    +  ++ G C+ G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602

Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRW 416
           + +++                                 I E+M       C S ++P   
Sbjct: 603 QMEKACQ-------------------------------IFERM-------CGSKDVP--- 621

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
             + +   K Y+       +S  P+   Y A + G CKL   E+A ++   +S +    +
Sbjct: 622 --DVDMYFKQYD-----DDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPN 674

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
            I Y  L++GLC+V K+ EA EV   MS++G   +  +++ LI     +++ D A ++ S
Sbjct: 675 QIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 734

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
               +  +     YT+++ GL K+ +  +   ++  M  +GC  +V  Y  +I       
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
           K++ C      M   G+ P+  T   L+        L +  + + ++        ++ Y 
Sbjct: 795 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYR 854

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +I G  KE + S    LLD +      P  + + LLV
Sbjct: 855 KVIEGFNKEFIESLG--LLDEIGQDDTAPFLSLYRLLV 890



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/512 (22%), Positives = 232/512 (45%), Gaps = 27/512 (5%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +   A  V+  M   GF      ++ VLG +    +    F+ +++EM + G+V +V T 
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFL-LFEEMKRGGLVADVYTY 521

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +++   +   IE A   F  M + GC PN  T+  +I   +   +V  +  +   M  
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE-----------------L 308
            G    +  Y+ +I   C+  ++E+A ++F+ M     +PD                  +
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVV 641

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES--VNFLE 366
            Y  L++  C+  R+++A  +L+ M + G  P   V+  ++ GLC+VGK DE+  V    
Sbjct: 642 IYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEM 701

Query: 367 DKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
            + G+  +   +++L++      +  LA  +L KM +   A +   +   I  LC+  + 
Sbjct: 702 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 761

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +AY+L+  M      P+  TY+A + G  ++   E  L +  ++ ++ +  + ++Y  L
Sbjct: 762 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVL 821

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++  C+   +  A  +   M +      ++ +  +I G    ++  +++ L        T
Sbjct: 822 IDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 879

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL-DVEA-YCILIQSMSEQNKLKDC 601
           +   S Y  ++  L+K QR +  L +L ++      L D  + Y  LI+S+   NK+   
Sbjct: 880 APFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKA 939

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
              F+ M K G++P+ +T  SL+ GL   S++
Sbjct: 940 FRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKI 971



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/526 (20%), Positives = 213/526 (40%), Gaps = 72/526 (13%)

Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           AG  E+   + + M+ + +         ++    N  ++  A  +   M  GG    V  
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 169 FNVVL-----GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           + +++       ++E+ R +      + EM + G  PNV T   L+    +  ++  A +
Sbjct: 521 YTIMVDSFCKAGLIEQARKW------FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-----------------DL 266
            F  M  +GC PN  T+  +I G     +++ +  I   M                  D 
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDN 634

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
             +  +  Y  ++   C+ +++EEA +L   M      P+++ Y+ LI+ LC+  +LD+A
Sbjct: 635 SERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 694

Query: 327 NDILEDMIVIGL-----------------------------------TPTDDVFVDIVRG 351
            ++  +M   G                                     P   ++ +++ G
Sbjct: 695 QEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 754

Query: 352 LCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-D 406
           LC+VGK DE+   +    E  C      + A+++     GK      +LE+M  + +A +
Sbjct: 755 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPN 814

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++ + I   C+N  +  A+ LL  M  +      A Y   + G  K   + ++L +  
Sbjct: 815 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--EFIESLGLLD 872

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL--SSSSFNILIYGLCV 524
           ++           Y  LV+ L + +++  A+ +   ++    +L   SS++N LI  LC+
Sbjct: 873 EIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCL 932

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
             KVDKA RL S     G      T+  ++ GL +  +  + L++L
Sbjct: 933 ANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 40/351 (11%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           PNV     LL+   + +R+E A      M  +GC PN   ++ +I GL    ++D++  +
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G    L  Y+ +I    +  + + A ++   M      P+ + Y E+I+ LC+
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
             + D+A  +++ M   G  P    +  ++ G   +GK +  +  LE       +P    
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 376 HNALLECCCNAGKFFLAKCILEKMAD----------RKIA-------------------- 405
           +  L++ CC  G   +A  +LE+M            RK+                     
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQD 877

Query: 406 DCDSWNIPIRWLCEN----EEIRKAYELLGRMVV--SSVVPDCATYSAFVLGKCKLCNYE 459
           D   +    R L +N    + +  A  LL  +    +++V   +TY++ +   C     +
Sbjct: 878 DTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVD 937

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
            A R+F ++S + ++ +  ++  L++GL +  KI+EA+ +   +S   C L
Sbjct: 938 KAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVCPL 988



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 44/211 (20%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRV 147
           +K  Q    TY  MI   G  G +E    L + M  K   PN     +      ++H   
Sbjct: 773 EKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRV-----LIDHCCK 827

Query: 148 NGAMRVLVNM-----------NSGGFKLSVDVFNV----VLGAIVE-EKRGFADFVFVYK 191
           NGA+ V  N+           ++ G++  ++ FN      LG + E  +   A F+ +Y+
Sbjct: 828 NGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYR 887

Query: 192 EMV----------------------KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            +V                       A +V    T N L+E L   N+++ A   F  M 
Sbjct: 888 LLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMS 947

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           KKG  P  +TF  +IKGL  NS++ +++ +L
Sbjct: 948 KKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 9/232 (3%)

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           Y +MI  L   G  +E   L Q M++E+   PNV     +++  F    ++   + +L  
Sbjct: 748 YTEMIDGLCKVGKTDEAYKLMQ-MMEEKGCQPNVV-TYTAMIDGFGRIGKIETCLELLER 805

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G   +   + V++      K G  D      E +K    P        +   F   
Sbjct: 806 MGSKGVAPNYVTYRVLIDHCC--KNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE 863

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL--ELSF 274
            IES L     + +    P    + +++  LI   R++ ++ +L E+      L    S 
Sbjct: 864 FIES-LGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSST 922

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           Y  +I  LC  NK+++A RLF  M    ++P+  T+  LI  L  N ++ +A
Sbjct: 923 YNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEA 974


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 198/436 (45%), Gaps = 51/436 (11%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQ--KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
           +++++    D+  A+ +F   + +    F+H  +T+  +I +L         EG+ + M 
Sbjct: 18  VVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGMLERMK 77

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
           +E+     +  +S+   +   +R   A+RV   M     + +   +  +L  +VEE    
Sbjct: 78  QEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENH-V 136

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR-IESALDQFRRMHKKGCCPNSRTFEI 242
              +  Y+EM + GI  +V +LN L++ L +    ++SAL  F+ M  +GC P+S T+  
Sbjct: 137 KRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGT 196

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I GL     + ++  +  EM   G    +  YT +I  LC+ N L+EAI L + M+  D
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND 256

Query: 303 L-----------------------------------MPDELTYEELINCLCENLRLDDAN 327
           +                                   +P+ +TY  LIN LC+  +L +A 
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAV 316

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-----------H 376
           +IL+ M + GL P   ++  I+ GLC  G + E+ NF+++      SP           H
Sbjct: 317 EILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMH 376

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N +++  CN      A  +   M  R I+ + D+++  ++  C+  ++ KA  +L  MV+
Sbjct: 377 NMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVL 436

Query: 436 SSVVPDCATYSAFVLG 451
              +PD   ++  + G
Sbjct: 437 DGCIPDEGVWNVVIGG 452



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/491 (20%), Positives = 204/491 (41%), Gaps = 63/491 (12%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G   + +T   ++  L   N+   A     RM ++ C      F  + +G     R  D+
Sbjct: 45  GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           + +  +M    ++     Y  I+ +L  EN ++ AI  ++ MR L +    ++   LI  
Sbjct: 105 IRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKA 164

Query: 317 LCENLR-LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
           LC+N   +D A  I ++M   G  P    +  ++ GLC +G   E               
Sbjct: 165 LCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISE--------------- 209

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                           AK + ++M  +   A   ++   I  LC++  + +A  LL  M 
Sbjct: 210 ----------------AKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMK 253

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            + + P+  TYS+ + G CK  +   A+++   +  +  + + ++YS L+ GLC+  K+ 
Sbjct: 254 RNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLR 313

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           EAVE+   M   G   ++  +  +I GLC            + +Y    ++      +++
Sbjct: 314 EAVEILDRMRIQGLKPNAGLYGKIISGLCA-----------AGSYQEAANFI----DEMV 358

Query: 555 LGLVKLQRAK-DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           LG +   RA   L V +  M+V+G   +V+               +   L+ ++  +  +
Sbjct: 359 LGGISPNRASWSLHVRMHNMVVQGLCNNVDPP-------------RAFQLYLSMRTRC-I 404

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
             + +T   L+        LH  +  + ++V D  + D  ++N++I GLW      +A+ 
Sbjct: 405 SVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATE 464

Query: 674 LLDLMLGKGWV 684
            L + L + +V
Sbjct: 465 QLLVELQQKFV 475



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 92/439 (20%), Positives = 188/439 (42%), Gaps = 24/439 (5%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRAL---DLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           ++ ++  E  + +A+ +F    A        D  T+  +I+ L    +   A  +LE M 
Sbjct: 18  VVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGMLERMK 77

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFF 390
                 T+D+F+ I RG   V +  +++       G+   P       +L+         
Sbjct: 78  QEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVK 137

Query: 391 LAKCILEKMADRKI-ADCDSWNIPIRWLCENEE-IRKAYELLGRMVVSSVVPDCATYSAF 448
            A     +M +  I +   S NI I+ LC+N+E +  A  +   M      PD  TY   
Sbjct: 138 RAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTL 197

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G C+L N  +A  +F+++  +      ++Y+ L+ GLCQ   + EA+ +   M +N  
Sbjct: 198 INGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDI 257

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             +  +++ L+ GLC      +A++L  +           TY+ ++ GL K ++ ++ + 
Sbjct: 258 EPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVE 317

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET--------- 619
           +L +M ++G   +   Y  +I  +      ++ A F + MV  G+ P+R +         
Sbjct: 318 ILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHN 377

Query: 620 --MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDL 677
             +  L + +       L  S   + +S    ++   ++ L+    K G   +A+ +L+ 
Sbjct: 378 MVVQGLCNNVDPPRAFQLYLSMRTRCIS----VEIDTFDCLVKCFCKRGDLHKAARILEE 433

Query: 678 MLGKGWVPDATTHGLLVGS 696
           M+  G +PD     +++G 
Sbjct: 434 MVLDGCIPDEGVWNVVIGG 452


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/517 (22%), Positives = 228/517 (44%), Gaps = 16/517 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD-QFRRMHKKGCCPNSRTFEIVIKGLI 248
           + ++++ G+  ++   N+LL+   E  R + ALD    R  + GC P+  ++ I++K L 
Sbjct: 138 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 197

Query: 249 ANSRVDDSVSILGEMFDLGI--QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
              +   +  +L  M + G     ++  YT +I    +E  + +A  LFK M    + PD
Sbjct: 198 DQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPD 257

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +++ LC+   +  A   L  M+  G+ P +  + +++ G    G++ E+V   +
Sbjct: 258 LVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 317

Query: 367 DKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENE 421
           +   +   P     N L+   C  GK   A+ + + MA + +  D  S+ I +       
Sbjct: 318 EMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKG 377

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +    +L   M+   + PD  T+S  +         + A+ +F ++    +  D ++Y+
Sbjct: 378 CLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYT 437

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            ++  LC++ K+ +A+E F  M   G +    +++ LI G C    + KA  L     ++
Sbjct: 438 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNN 497

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G       ++ I+  L KL R  D   +    +  G   D   Y +L+       K++  
Sbjct: 498 GMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKA 557

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQ----LHLVSSGINKLVSDSEVLDSSMYNI 657
              F+ MV AG+ P+     +L++G     +    L L    + K +  S +L    YNI
Sbjct: 558 LRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL----YNI 613

Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +I+GL+  G T  A      M   G   +  T+ +++
Sbjct: 614 IIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVL 650



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 191/430 (44%), Gaps = 32/430 (7%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           V V+KEM +  I+P+V TLN L+  L +  +I+ A D F  M  KG  P+  +++I++ G
Sbjct: 313 VRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNG 372

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 + D   +   M   GI  ++  ++ +I        L++A+ +F  MR   + PD
Sbjct: 373 YATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 432

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  +I  LC   ++DDA +    MI  G+ P    +  +++G C             
Sbjct: 433 VVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT------------ 480

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
                    H +LL+           + ILE M +    D   ++  I  LC+   I  A
Sbjct: 481 ---------HGSLLKA---------KELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDA 522

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +    V     PD   YS  + G C +   E ALRVF  + +  +  + + Y  LV G
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNG 582

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM-RKVDKAIRLRSLAYSSGTSY 545
            C++ +I E + +F  M + G   S+  +NI+I GL V  R V   ++   +   SG + 
Sbjct: 583 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMT-ESGIAI 641

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
              TY  ++ G  K +   + + +  ++      +D+     +I  M +  ++++    F
Sbjct: 642 NKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 701

Query: 606 NVMVKAGLVP 615
             + ++GLVP
Sbjct: 702 ASISRSGLVP 711



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 195/435 (44%), Gaps = 10/435 (2%)

Query: 270 LELSFYTCIIPMLC--RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           L  + +T  I M C  R ++ E A+  F  +    L  D +    L+   CE  R D+A 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 328 DIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           DIL      +G  P    +  +++ LC+ GK  ++ + L    + G V SP    +  ++
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
           +C    G    A  + ++M  R I  D  +++  +  LC+   + KA   L +MV   V+
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G      +++A+RVF+++   S++ D ++ + L+  LC+  KI EA +V
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G +    S+ I++ G      +     L  L    G +    T++ ++     
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                  +++  +M   G   DV  Y  +I ++    K+ D    FN M+  G+ PD+  
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              L+ G      L      I +++++   LD   ++ +IN L K G    A  + DL +
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTV 530

Query: 680 GKGWVPDATTHGLLV 694
             G  PDA  + +L+
Sbjct: 531 NVGQHPDAVVYSMLM 545



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 191/422 (45%), Gaps = 6/422 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++KEMV+ GI P++ T + ++  L +   +  A    R+M  KG  P++ T+  +I G  
Sbjct: 245 LFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 304

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           +  +  ++V +  EM    I  ++     ++  LC+  K++EA  +F  M      PD  
Sbjct: 305 STGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
           +Y+ ++N       L D  D+ + M+  G+ P    F  +++     G  D+++    + 
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
             +   P    +  ++   C  GK   A     +M D+ +A D  +++  I+  C +  +
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 484

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            KA EL+  ++ + +  D   +S+ +   CKL    DA  +F          D++ YS L
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSML 544

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++G C V K+ +A+ VF  M   G   +   +  L+ G C + ++D+ + L       G 
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             +T  Y  I+ GL    R     V   +M   G A++   Y I+++    +N+  D A+
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFF-KNRCFDEAI 663

Query: 604 FF 605
           F 
Sbjct: 664 FL 665



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/465 (20%), Positives = 212/465 (45%), Gaps = 60/465 (12%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA--GNVEE 114
           L  N + ++LI    +T     A+++FK +   +R     D     +L   L   G ++E
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEM---RRHSILPDVVTLNMLMGSLCKYGKIKE 346

Query: 115 MEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN----MNSGGFKLSVDVF 169
              +   M +K + P+V    I L     N Y   G +  + +    M   G    +  F
Sbjct: 347 ARDVFDTMAMKGQNPDVFSYKIML-----NGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 401

Query: 170 NVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +V++ A      G  D  + ++ EM   G+ P+V T   ++  L    +++ A+++F +M
Sbjct: 402 SVLIKAYANC--GMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             +G  P+   +  +I+G   +  +  +  ++ E+ + G++L++ F++ II  LC+  ++
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
            +A  +F +   +   PD + Y  L++  C   +++ A  + + M+  G+ P   V+  +
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTL 579

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           V G C++G+ DE ++   +       P    +N +++    AG+   AK    +M +  I
Sbjct: 580 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGI 639

Query: 405 A--DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           A   C ++NI +R   +N                               +C    +++A+
Sbjct: 640 AINKC-TYNIVLRGFFKN-------------------------------RC----FDEAI 663

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            +F+++ A ++ +D I+ + ++ G+ Q  ++ EA ++F  +S++G
Sbjct: 664 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 708



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/322 (20%), Positives = 135/322 (41%), Gaps = 4/322 (1%)

Query: 379 LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE-LLGRMVVS 436
           L++CC  A +  LA     ++    +  D    N  ++  CE +   +A + LL R    
Sbjct: 121 LMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPEL 180

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL--DSISYSKLVEGLCQVEKIT 494
             VPD  +YS  +   C       A  + R ++    V   D ++Y+ +++   +   + 
Sbjct: 181 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVN 240

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +A ++F  M + G      +++ +++ LC  R + KA        + G      TY  ++
Sbjct: 241 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLI 300

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            G     + K+ + V  +M       DV    +L+ S+ +  K+K+    F+ M   G  
Sbjct: 301 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQN 360

Query: 615 PDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYL 674
           PD  +   +L+G A    L  ++   + ++ D    D   +++LI      G+  +A  +
Sbjct: 361 PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMII 420

Query: 675 LDLMLGKGWVPDATTHGLLVGS 696
            + M   G  PD  T+  ++ +
Sbjct: 421 FNEMRDHGVKPDVVTYTTVIAA 442



 Score = 42.7 bits (99), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M   G  ++   +N+VL    +  R F + +F++KE+    +  ++ TLN ++  +F+T 
Sbjct: 634 MTESGIAINKCTYNIVLRGFFKN-RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 692

Query: 217 RIESALDQFRRMHKKGCCP 235
           R+E A D F  + + G  P
Sbjct: 693 RVEEAKDLFASISRSGLVP 711


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 182/406 (44%), Gaps = 39/406 (9%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR----------- 181
           A  +L+  F    R++ A RVL  M S  F      +N+++G++    +           
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 182 -----------------------GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
                                  G  + + +  EM+  G+ P++ T N ++  + +   +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           + A +  R +  KGC P+  ++ I+++ L+   + ++   ++ +MF       +  Y+ +
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LCR+ K+EEA+ L K+M+   L PD  +Y+ LI   C   RLD A + LE MI  G 
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAG-KFFLAK 393
            P    +  ++  LC+ GK D+++       E  C   +S +N +     ++G K     
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            ILE +++    D  ++N  I  LC    + KA+ELL  M      P   TY+  +LG C
Sbjct: 456 MILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC 515

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           K    EDA+ V   +       +  +Y+ L+EG+       EA+E+
Sbjct: 516 KAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 177/398 (44%), Gaps = 5/398 (1%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V   N L+    + NRI+ A     RM  K   P++ T+ I+I  L +  ++D ++ +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L ++     Q  +  YT +I     E  ++EA++L   M +  L PD  TY  +I  +C+
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSP 375
              +D A +++ ++ + G  P    +  ++R L   GK++E          +KC      
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           ++ L+   C  GK   A  +L+ M ++ +  D  S++  I   C    +  A E L  M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
               +PD   Y+  +   CK    + AL +F ++       +S SY+ +   L       
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A+ +   M  NG      ++N +I  LC    VDKA  L     S     +  TY  ++
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           LG  K  R +D + VL  M+  GC  +   Y +LI+ +
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 131/558 (23%), Positives = 244/558 (43%), Gaps = 52/558 (9%)

Query: 32  TIPLSSETDMIKSHQTTDYEAKIQSLRHNLS--------PDHLIRVLDNTNDLSS----- 78
           TIP  S+T   + H    Y      L HN S        P+H     DN    SS     
Sbjct: 12  TIPFYSKT---QKH----YSNSSHGLSHNRSLLTFSNSNPNH-----DNGKSFSSSGARN 59

Query: 79  --ALKIFKWVSIQKRFQHTA-----DTY-CKMILKLGLAGNVEEMEGLCQNMVKERY-PN 129
             A      +  ++R QH+      DT   K+  +   +GN  E   L + MV++ Y P+
Sbjct: 60  LQATTTDAAIPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPD 119

Query: 130 VR--EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           V     LI   F+  N   V  A+RV+  +   G +  V  +N ++    +  R   D  
Sbjct: 120 VILCTKLIKGFFTLRN---VPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNR-IDDAT 174

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            V   M      P+  T N ++  L    +++ AL    ++    C P   T+ I+I+  
Sbjct: 175 RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEAT 234

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM--- 304
           +    VD+++ +L EM   G++ ++  Y  II  +C+E  ++   R F+M+R L+L    
Sbjct: 235 MLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD---RAFEMIRNLELKGCE 291

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD ++Y  L+  L    + ++   ++  M      P    +  ++  LC  GK +E++N 
Sbjct: 292 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 351

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCE 419
           L+       +P    ++ L+   C  G+  +A   LE M +D  + D  ++N  +  LC+
Sbjct: 352 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 411

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N +  +A E+ G++      P+ ++Y+          +   AL +  ++ +  +  D I+
Sbjct: 412 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEIT 471

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ ++  LC+   + +A E+   M       S  ++NI++ G C   +++ AI +     
Sbjct: 472 YNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMV 531

Query: 540 SSGTSYTTSTYTKIMLGL 557
            +G     +TYT ++ G+
Sbjct: 532 GNGCRPNETTYTVLIEGI 549



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 203/452 (44%), Gaps = 20/452 (4%)

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +S+ +L  M   G   ++   T +I        + +A+R+ +++      PD   Y  LI
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALI 161

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCG 370
           N  C+  R+DDA  +L+ M     +P    +  ++  LC  GK D ++  L+    D C 
Sbjct: 162 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQ 221

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
                +  L+E     G    A  +L++M  R +  D  ++N  IR +C+   + +A+E+
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           +  + +    PD  +Y+  +        +E+  ++  ++ ++    + ++YS L+  LC+
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             KI EA+ +   M + G +  + S++ LI   C   ++D AI       S G       
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM-SEQNKLKDCALFFNVM 608
           Y  ++  L K  +A   L +  ++   GC+ +  +Y  +  ++ S  +K++   +    M
Sbjct: 402 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE-M 460

Query: 609 VKAGLVPDRETMLSLL-----HGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGL 662
           V  G+ PD  T  S++      G+ D +   LV       +   E   S + YNI++ G 
Sbjct: 461 VSNGIDPDEITYNSMISCLCREGMVDKAFELLVD------MRSCEFHPSVVTYNIVLLGF 514

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K      A  +LD M+G G  P+ TT+ +L+
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 3/259 (1%)

Query: 110 GNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G  EE E L   M  E+  PNV    I L+ +     ++  AM +L  M   G       
Sbjct: 308 GKWEEGEKLMTKMFSEKCDPNVVTYSI-LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 366

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           ++ ++ A   E R      F+ + M+  G +P++   N +L  L +  + + AL+ F ++
Sbjct: 367 YDPLIAAFCREGRLDVAIEFL-ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 425

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + GC PNS ++  +   L ++     ++ ++ EM   GI  +   Y  +I  LCRE  +
Sbjct: 426 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMV 485

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++A  L   MR+ +  P  +TY  ++   C+  R++DA D+L+ M+  G  P +  +  +
Sbjct: 486 DKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVL 545

Query: 349 VRGLCEVGKFDESVNFLED 367
           + G+   G   E++    D
Sbjct: 546 IEGIGFAGYRAEAMELAND 564



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/370 (22%), Positives = 154/370 (41%), Gaps = 12/370 (3%)

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL-------AKC 394
           D   + I    C  G + ES++ LE     V   +N  +  C    K F        A  
Sbjct: 85  DTQMLKIFHRSCRSGNYIESLHLLET---MVRKGYNPDVILCTKLIKGFFTLRNVPKAVR 141

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           ++E +      D  ++N  I   C+   I  A  +L RM      PD  TY+  +   C 
Sbjct: 142 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 201

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               + AL+V  Q+ + +     I+Y+ L+E       + EA+++   M   G      +
Sbjct: 202 RGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFT 261

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N +I G+C    VD+A  +       G      +Y  ++  L+   + ++   ++ +M 
Sbjct: 262 YNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            E C  +V  Y ILI ++    K+++      +M + GL PD  +   L+       +L 
Sbjct: 322 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    +  ++SD  + D   YN ++  L K G   QA  +   +   G  P+++++  + 
Sbjct: 382 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 441

Query: 695 GS--SVGEEI 702
            +  S G++I
Sbjct: 442 SALWSSGDKI 451



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 86/242 (35%), Gaps = 36/242 (14%)

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           RQ  +QSL        K+    C+     E++ +   M + G +        LI G   +
Sbjct: 74  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 133

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           R V KA+R+  +    G                                      DV AY
Sbjct: 134 RNVPKAVRVMEILEKFGQP------------------------------------DVFAY 157

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    + N++ D     + M      PD  T   ++  L    +L L    +++L+S
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLS 217

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           D+       Y ILI     EG   +A  LLD ML +G  PD  T+  ++     E +  R
Sbjct: 218 DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277

Query: 706 RF 707
            F
Sbjct: 278 AF 279


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 164/712 (23%), Positives = 291/712 (40%), Gaps = 100/712 (14%)

Query: 10  ISNKIIKWVN-LTSCISSLSCANTIPLSSET--------DMIKSHQTTDYEAKIQSLRHN 60
           +S  ++  +N L +C    S   +IP   E          ++KSH+   +E  +Q+  H 
Sbjct: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEK--WEQSLQT--HF 56

Query: 61  LSPDHLI-----RVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV-EE 114
              D  I      VLD  ND+   LK F W S          T    +LKL     V  E
Sbjct: 57  TESDIPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPE 116

Query: 115 MEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
           +E   + M  KE  P  REAL  ++ ++ +   V+ A+                      
Sbjct: 117 IEFTLEEMKTKETIP-TREALSDVLCAYADVGLVDKALE--------------------- 154

Query: 174 GAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYLLEVLFETNRIESALDQFRRM---- 228
                          VY  +VK    +P+    N LL +L +  RIE+A   +  M    
Sbjct: 155 ---------------VYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRD 199

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
           +    C ++ T  I++KGL    R++D + ++   +  G    + FY  +I   C++ ++
Sbjct: 200 NGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEV 259

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           E A +LFK ++    +P   T+  L+N  C+    +  + +L +M   GL+    ++ +I
Sbjct: 260 ESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNI 319

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           +    ++G   ++ + L++           + E CC                     D  
Sbjct: 320 IDARYKLGFDIKAKDTLKE-----------MSENCCE-------------------PDLV 349

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I   C   E+ +A +LL + +   + P+  TY+  V G CK   Y  A     ++
Sbjct: 350 TYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEM 409

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           S   L +D ISY  L+ GL    ++  A+ +   M   G    ++ +N+L+ GL    K+
Sbjct: 410 STSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKL 469

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVE-GCALDVEA 584
             A  + +       +     Y  ++ G ++   L  AK L     Q+++E G    V  
Sbjct: 470 SMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLF----QLIIEKGLDPGVVG 525

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y ++I+  S+   + +  L  + M +A  VPD  T  +++ G      ++ V      +V
Sbjct: 526 YNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMV 585

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
             +   +   Y  LING  ++G T  A  L  +M   G  P   T+ +L+GS
Sbjct: 586 KQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGS 637



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 117/527 (22%), Positives = 215/527 (40%), Gaps = 72/527 (13%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRT 239
           R F +  F  +EM     +P  + L+ +L    +   ++ AL+ +  + K     P++  
Sbjct: 112 RVFPEIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYA 171

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDL--GIQLELSFYTC--IIPMLCRENKLEEAIRLF 295
              ++  L+ + R++ +  +  EM D   G  + +  YT   ++  LC + ++E+ I+L 
Sbjct: 172 CNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLI 231

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           +       +P+ + Y  LI+  C+   ++ A  + + + + G  PT   F  +V G C++
Sbjct: 232 ESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKM 291

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPI 414
           G F E+++ L             LLE                 M DR ++ +   +N  I
Sbjct: 292 GMF-EAIDLL-------------LLE-----------------MKDRGLSVNVQMYNNII 320

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
               +     KA + L  M  +   PD  TY+  +   C     E+A ++  Q   + L 
Sbjct: 321 DARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLA 380

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + ++Y+ LV G C+  + T+A +    MS +G  +   S+  LI+GL V  +VD A+ +
Sbjct: 381 PNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI 440

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
           R    + G     + Y  +M GL K  +     V+L +ML +  A D   Y  L+     
Sbjct: 441 RDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIR 500

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
              L +    F ++++ GL P          G+                           
Sbjct: 501 HGNLDEAKKLFQLIIEKGLDP----------GVVG------------------------- 525

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
           YN++I G  K G+   A   +D M     VPD  T   ++   V + 
Sbjct: 526 YNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQH 572



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 134/604 (22%), Positives = 250/604 (41%), Gaps = 57/604 (9%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK        G VE    L + +  + +    +   SLV  F           +L+ 
Sbjct: 251 DGYCK-------KGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLE 303

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           M   G  ++V ++N ++ A    K GF        KEM +    P++ T N L+      
Sbjct: 304 MKDRGLSVNVQMYNNIIDA--RYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSR 361

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
             +E A     +  ++G  PN  T+  ++ G         +   L EM   G+++++  Y
Sbjct: 362 GEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISY 421

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I  L    +++ A+ +   M    ++PD   Y  L+N L +  +L  A  +L +M+ 
Sbjct: 422 GALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLD 481

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
             + P   V+  +V G    G  DE                         A K F  + I
Sbjct: 482 QNIAPDAFVYATLVDGFIRHGNLDE-------------------------AKKLF--QLI 514

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
           +EK  D  +     +N+ I+   ++  +  A   + +M  +  VPD  T+S  + G  K 
Sbjct: 515 IEKGLDPGVV---GYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQ 571

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
            N    L++F  +  Q+   + ++Y+ L+ G C+  +   A ++F  M  +G   S  ++
Sbjct: 572 HNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTY 631

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK-----LQRAKDLLV-- 568
           +ILI   C   K+ KA+    L   +  +   + +  ++ G        + R  + L   
Sbjct: 632 SILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHEN 691

Query: 569 -------VLAQMLVEGCALDVEAY-CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
                    ++M+ +G      AY CILI  + +Q  +K      N M+  GL  D  + 
Sbjct: 692 SRSMFEDFFSRMIGDGWTQKAAAYNCILI-CLCQQRMVKTALQLRNKMLAFGLCSDAVSF 750

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
           ++L+HG+          + I+  +++ E+  +  Y++ ++    EG  S+AS +L  M+ 
Sbjct: 751 VALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMI- 809

Query: 681 KGWV 684
           KG+V
Sbjct: 810 KGYV 813



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 119/553 (21%), Positives = 225/553 (40%), Gaps = 60/553 (10%)

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G VPN+   N L++   +   +ESA   F+++  KG  P  +TF  ++ G       +  
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +L EM D G+ + +  Y  II    +     +A    K M      PD +TY  LIN 
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS-- 374
            C    +++A  +LE  I  GL P    +  +V G C+ G++ ++ ++L +     TS  
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMS---TSGL 414

Query: 375 -----PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
                 + AL+     AG+   A  I ++M +R I  D + +N+ +  L +  ++  A  
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL--------------- 473
           +L  M+  ++ PD   Y+  V G  +  N ++A ++F+ +  + L               
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 474 --------------------VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
                               V D  ++S +++G  +   +   +++F  M K  C  +  
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++  LI G C   +   A +L S+  S G   +  TY+ ++    K  +    +     M
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELM 654

Query: 574 LVEGCALDVEAYCILIQSMS---------EQNKLKDCAL-----FFNVMVKAGLVPDRET 619
           L+  C  +  A+  L+   +         E N L + +      FF+ M+  G       
Sbjct: 655 LINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAA 714

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
              +L  L     +       NK+++     D+  +  LI+G+  EG + +   ++   L
Sbjct: 715 YNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDL 774

Query: 680 GKGWVPDATTHGL 692
            +G +  A  + L
Sbjct: 775 NEGELQIALKYSL 787


>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 521

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 218/485 (44%), Gaps = 26/485 (5%)

Query: 24  ISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIF 83
           IS L  +   PL  ++    S    +   K + + H    +  I ++    D   AL+IF
Sbjct: 24  ISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISH----ESAINLIKREKDPQHALEIF 79

Query: 84  KWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER---YPNVREALISLVFS 140
             V  QK F H   TY  +I KL        ++ L   M  E    + N+   L+   + 
Sbjct: 80  NMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYK 139

Query: 141 FVNHYRV---NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVY-KEMVK 195
              H RV     A++ +V       K S+   +  L  +VE K+   A    +Y  E +K
Sbjct: 140 SSLHERVLEMFYAIQPIVRE-----KPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLK 194

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK-KGCCPNSRTFEIVIKGLIANSRVD 254
             + PN    N L++   ++  +ESAL+    M K +   PN  T+  +I GL  N R+ 
Sbjct: 195 --VRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLK 252

Query: 255 DSVSILGEMFDLGIQLELSF-YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           +++ +  EM      L  +  Y+ +I   C   K + A ++ + MR+    P+   Y  L
Sbjct: 253 EAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVL 312

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KC 369
           +N  C+  RL++A ++ ++M   GL P    +  ++   C VG+ DE++  L++    KC
Sbjct: 313 MNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKC 372

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYE 428
                  N LL+  C  G+F  A  +LE +A   +  +  S+ I + +LC+  E+ K+  
Sbjct: 373 KADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCA 432

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LLG M+    VP  AT +  ++  C+    ++A+     ++      +  S++ L+E +C
Sbjct: 433 LLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYIC 492

Query: 489 QVEKI 493
           +  K+
Sbjct: 493 RERKL 497



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 200/456 (43%), Gaps = 44/456 (9%)

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM-RALDLMP 305
           L+ +S  + S +++    + G + +   +   I ++ RE   + A+ +F M+        
Sbjct: 35  LVPDSPTETSSTLV----ETGRKCKFISHESAINLIKREKDPQHALEIFNMVGEQKGFNH 90

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +  TY  LI+ L +  +    + +L  M        +++F+++++               
Sbjct: 91  NHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHF------------- 137

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCIL-EKMADRKIADCDSWNIPIRWLCENEEIR 424
                Y +S H  +LE       F+  + I+ EK + + I+ C      +  L E+++I 
Sbjct: 138 -----YKSSLHERVLEM------FYAIQPIVREKPSLKAISTC------LNILVESKQID 180

Query: 425 KAYELLGRMVVS---SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS-AQSLVLDSISY 480
            A + L  + V+    V P+   ++  V   CK  + E AL V  ++  ++    + I+Y
Sbjct: 181 LAQKCL--LYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITY 238

Query: 481 SKLVEGLCQVEKITEAVEVFCCM-SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           S L++GLC   ++ EA+E+F  M SK+     + ++++LI G C   K D+A ++     
Sbjct: 239 STLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMR 298

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           S+G       Y+ +M G  K  R ++   V  +M   G   D   Y  LI       ++ 
Sbjct: 299 SNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRID 358

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +       M +     D  T   LL GL    +       +  L  +   L+   Y I++
Sbjct: 359 EAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVL 418

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPD-ATTHGLLV 694
           N L ++G   ++  LL LML +G+VP  AT++ LLV
Sbjct: 419 NFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLV 454



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/428 (20%), Positives = 187/428 (43%), Gaps = 17/428 (3%)

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           +KG   N  T+  +I  L    +     ++L +M     +   + +  ++    + +  E
Sbjct: 85  QKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHE 144

Query: 290 EAIRLFKMMRAL-DLMPDELTYEELINCLCENLRLDDANDIL----EDMIVIGLTPTDDV 344
             + +F  ++ +    P        +N L E+ ++D A   L    E + V    P   +
Sbjct: 145 RVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKV---RPNTCI 201

Query: 345 FVDIVRGLCEVGKFDESVNFLED-KCGYVTSP----HNALLECCCNAGKFFLAKCILEKM 399
           F  +V+  C+ G  + ++  + + K    + P    ++ L++  C  G+   A  + E+M
Sbjct: 202 FNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEM 261

Query: 400 A--DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
              D+ + D  ++++ I+  C   +  +A +++  M  +   P+   YS  + G CK   
Sbjct: 262 VSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGR 321

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            E+A  VF ++ +  L  D++ Y+ L+   C V +I EA+E+   M++  C   + +FN+
Sbjct: 322 LEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNV 381

Query: 518 LIYGLCVMRKVDKAIR-LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           L+ GLC   + D+A+R L +LAY  G      +Y  ++  L +    +    +L  ML  
Sbjct: 382 LLKGLCREGRFDEALRMLENLAY-EGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSR 440

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G          L+  + E   + +       + + G  P+ ++   L+  +    +L  V
Sbjct: 441 GFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFV 500

Query: 637 SSGINKLV 644
              +++LV
Sbjct: 501 FELVDELV 508



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 1/120 (0%)

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMV-KAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
           +V  Y  LI  +    +LK+    F  MV K  ++PD  T   L+ G   G +       
Sbjct: 234 NVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKI 293

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
           +  + S+    +   Y++L+NG  KEG   +A  + D M   G  PD   +  L+    G
Sbjct: 294 MEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCG 353


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/571 (22%), Positives = 247/571 (43%), Gaps = 75/571 (13%)

Query: 48  TDYEAKIQSLRHNLSPDHLI--RVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK 105
           +D E  I+ L+  L  DH +  +VLD   ++ + ++ FKW   ++ FQH + TY  +I  
Sbjct: 76  SDAEKAIEVLK--LKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIRC 133

Query: 106 LGLAGNVEEMEGLCQNMVKERYP-NVREALISLVFSFVNHYR-VNGAMRVLVNMNSGGFK 163
           L  +G V+EM    Q+M+  R P +V  A  S +   +   + VN A+ V   +      
Sbjct: 134 LEESGLVDEMWRTIQDMI--RSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCN 191

Query: 164 LSVDVFNVVLGAIVEE----------------------------------KRGFADFVF- 188
            +  V+N ++  ++ E                                  K    DF F 
Sbjct: 192 PTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFR 251

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ EM + G+ P       +L + F+ N++E+AL     M  KGC P   T+  +IKGL 
Sbjct: 252 LFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLG 311

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              RVDD+ S+   M   G + ++     +I +L R  +LE+A++LF  M +L   P+ +
Sbjct: 312 KVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVV 371

Query: 309 TYEELINCLCEN-LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE- 366
           TY  +I  + E+     +A    E M   G+ P+   +  ++ G C+  + ++++  LE 
Sbjct: 372 TYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEE 431

Query: 367 -DKCGYVTSP--HNALLECCCNAGKFFLAKCILEKMAD--------------RKIADCDS 409
            D+ G+   P  + +L++    A ++  A  + +++ +              +   +C  
Sbjct: 432 MDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
            +  +   CE E++                PD  TY+A + G  +    ++A  + R + 
Sbjct: 492 LSDAVDLFCEXEKL-------------GCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR 538

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
                 D  S++ ++ GL +      A+E+F  M ++     + S+N ++  L      +
Sbjct: 539 ENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFE 598

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
            A +L       G  Y + TY+ I+  + K+
Sbjct: 599 MAAKLMREMKLKGFEYDSITYSSILEAVGKV 629



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/520 (19%), Positives = 219/520 (42%), Gaps = 43/520 (8%)

Query: 179 EKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
           E+ G  D ++   ++M+++         + +L++L +   +  AL  F ++  + C P +
Sbjct: 135 EESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTA 194

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFYTCIIPMLCRENKLEEAIRLFK 296
             +  +I  L+     +    +  E+   G    +   Y+ +I    +  + + A RLF 
Sbjct: 195 TVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFD 254

Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
            M+   L P E  Y  ++    +  +++ A  ++E+M   G  PT   + ++++GL +VG
Sbjct: 255 EMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVG 314

Query: 357 KFDES----VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWN 411
           + D++     N L+D C       N L+     AG+   A  +  KM   + A +  ++N
Sbjct: 315 RVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYN 374

Query: 412 IPIRWLCENE-EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
             I+ + E++    +A     +M  + + P   TY+  + G CK    E AL +  ++  
Sbjct: 375 TVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDE 434

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
           +       +Y  L++ L + ++   A E+F  + +N    S+  + ++I       ++  
Sbjct: 435 KGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSD 494

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ L       G S    TY  +M G+++     +   ++  M   GC  D++++ I++ 
Sbjct: 495 AVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILN 554

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
            +++    K     F  M ++ ++PD                                  
Sbjct: 555 GLAKTGGPKRAIEMFTKMKESEIMPD---------------------------------- 580

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +  YN +++ L + G+   A+ L+  M  KG+  D+ T+
Sbjct: 581 -AVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITY 619



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 109/530 (20%), Positives = 213/530 (40%), Gaps = 51/530 (9%)

Query: 203 DTLNY--LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           D+  Y  L+  L E+  ++      + M +  C      +  ++K L     V+ ++S+ 
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCE 319
            ++         + Y  +I ML  E   E+   L+ ++    +  PD +TY  LI+   +
Sbjct: 183 YQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGK 242

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNAL 379
             R D A  + ++M   GL PT+ ++  I+    ++ K + ++  +E+  G   +P    
Sbjct: 243 LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAP---- 298

Query: 380 LECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                                        ++   I+ L +   +  AY L   M+     
Sbjct: 299 --------------------------TVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCK 332

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE-KITEAVE 498
           PD    +  +    +    EDAL++F ++ +     + ++Y+ +++ + + +   +EA  
Sbjct: 333 PDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAAL 392

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM--LG 556
            F  M  NG + SS ++ ILI G C   +V+KA+ L       G     + Y  ++  LG
Sbjct: 393 WFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLG 452

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALD-VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
             K   A + L    Q L E C       Y ++I+      +L D    F    K G  P
Sbjct: 453 RAKRYEAANELF---QELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSP 509

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  T  +L+ G+     +    S +  +  +    D   +NI++NGL K G   +A  + 
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMF 569

Query: 676 DLMLGKGWVPDATTHGLL-----------VGSSVGEEIDSRRFAFDSSSF 714
             M     +PDA ++  +           + + +  E+  + F +DS ++
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITY 619


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 195/436 (44%), Gaps = 10/436 (2%)

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +F + +M+  G+VP  +T N LL +L ++N  E A   F    K     +  +F I+IKG
Sbjct: 115 LFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKG 173

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 +D    +LG+M ++G+   +  YT +I   C+   +E   +LF  M  LD++ +
Sbjct: 174 CCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVAN 233

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           + TY  LIN   +     D  ++ E M + G+ P    +  ++   C  GK + +    +
Sbjct: 234 QYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFD 293

Query: 367 D------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCE 419
           +       C  VT  +N L+   C   +   A+ ++ +M  D    +  S+N  I   C 
Sbjct: 294 EMRERGVACNVVT--YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCS 351

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
              + KA  L  +M  S   P  ATY+  + G  +  N      + R++ A+ L    ++
Sbjct: 352 IGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT 411

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++ L + + I +A +++  M K G       + +LI+GLCV+  + +A +L     
Sbjct: 412 YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLD 471

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                     Y  ++ G  K   +   L +L +M   G   +V +Y   IQ + +  K  
Sbjct: 472 EMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWT 531

Query: 600 DCALFFNVMVKAGLVP 615
           +  +    M++ GL P
Sbjct: 532 EAEVLLKDMIELGLKP 547



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 194/425 (45%), Gaps = 14/425 (3%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  II    R    E+A+  F  M    L+P   T+  L+  L ++   + A  +  +  
Sbjct: 98  HEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-- 155

Query: 335 VIGLTPTDDV-FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
             G    D   F  +++G CEVG  D+    L        SP    +  L++ CC  G  
Sbjct: 156 TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDI 215

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
              K +  KM +  + A+  ++ + I    +    +   EL  +M ++ +VP+  TY++ 
Sbjct: 216 ERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSM 275

Query: 449 VLGKCKLCN---YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +   C+ CN     +A  +F ++  + +  + ++Y+ L+ GLCQ  ++ EA  + C M +
Sbjct: 276 I---CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
           +G S +  S+N LI G C +  +DKA  L +   SSG S + +TY  ++ G  + + +  
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           +  ++ +M   G +     Y IL+ ++   + ++     ++ M KAGLV D      L+H
Sbjct: 393 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIH 452

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL     +   S     L       +  +YN +I G  KEG + +A  LL  M   G VP
Sbjct: 453 GLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVP 512

Query: 686 DATTH 690
           +  ++
Sbjct: 513 NVASY 517



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 169/388 (43%), Gaps = 9/388 (2%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYL 208
           A RV  N   G  KL V  F +++    E   G+ D  F V  +M + G+ PNV     L
Sbjct: 149 AWRVF-NETKGNVKLDVYSFGIMIKGCCE--VGYLDKGFEVLGQMEEMGLSPNVVVYTTL 205

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++   +   IE     F +M +     N  T+ ++I G        D + +  +M   GI
Sbjct: 206 IDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGI 265

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
              +  Y  +I   C + KL  A  LF  MR   +  + +TY  LI  LC+  R+ +A  
Sbjct: 266 VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAER 325

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCC 384
           ++  M   GL+P    +  ++ G C +G  D++ +          SP    +N L+    
Sbjct: 326 LMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFS 385

Query: 385 NAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
            A        ++ +M  R ++    ++ I +  L  ++ I KA+++   M  + +V D  
Sbjct: 386 EAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIY 445

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
            Y   + G C + + ++A ++F+ +    L  + + Y+ ++ G C+      A+ +   M
Sbjct: 446 IYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 505

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            +NG   + +S+N  I  LC   K  +A
Sbjct: 506 GENGMVPNVASYNSTIQILCKDEKWTEA 533



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 5/191 (2%)

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKR--GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE 214
           M S G   S+  +N+++    E K   G  D V   +EM   G+ P+  T   L++ L  
Sbjct: 365 MKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV---REMEARGLSPSKVTYTILMDALVR 421

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           ++ IE A   +  M K G   +   + ++I GL     + ++  +   + ++ ++     
Sbjct: 422 SDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVI 481

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y  +I   C+E     A+RL K M    ++P+  +Y   I  LC++ +  +A  +L+DMI
Sbjct: 482 YNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMI 541

Query: 335 VIGLTPTDDVF 345
            +GL P+  ++
Sbjct: 542 ELGLKPSISIW 552



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 111/272 (40%)

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  ++   + G C++   +    V  Q+    L  + + Y+ L++G C+   I    ++F
Sbjct: 163 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 222

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M +     +  ++ +LI G   M      I L      +G      TY  ++      
Sbjct: 223 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 282

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            +  +   +  +M   G A +V  Y  LI  + ++ ++ +       M + GL P+  + 
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +L+ G      L   SS  N++ S  +    + YNILI G  +   ++  + ++  M  
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 402

Query: 681 KGWVPDATTHGLLVGSSVGEEIDSRRFAFDSS 712
           +G  P   T+ +L+ + V  +   + F   SS
Sbjct: 403 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 434


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/524 (21%), Positives = 227/524 (43%), Gaps = 33/524 (6%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F  +LG++V+ K  +   + ++++M   GI PN    N L+    +   I  A     ++
Sbjct: 73  FGQILGSLVKSKH-YHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKI 131

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ T    IKG     ++  +++   ++  LG  L+   Y  +I  LC+  + 
Sbjct: 132 LKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET 191

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A+ L + +    +  D + Y  +I+ +C++  ++DA D+  +M+   ++     +  +
Sbjct: 192 RAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSAL 251

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           + G C VGK       L+D  G                        +  KM    I  D 
Sbjct: 252 ISGFCIVGK-------LKDAIG------------------------LFNKMTSENINPDV 280

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++NI +   C+   +++A   L  M+   + PD  TY++ + G C +     A  +   
Sbjct: 281 YTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNT 340

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +S + +     SY+ ++ G C+++ + +A+++F  M       +  ++N LI GLC   +
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +  A+ L  L +  G      TY+ I+  L K       + +L ++  +G   ++  Y I
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI  + +  +L+D    F  ++  G      T   ++ G           S ++K+  +S
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            + D+  Y I+I  L+ +    +A  LL  M+ +G +     +G
Sbjct: 521 CIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYG 564



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/487 (21%), Positives = 212/487 (43%), Gaps = 7/487 (1%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N +  A+  F  + ++   P    F  ++  L+ +      +S+  +M   GI+     +
Sbjct: 49  NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I   C+   +  A  +   +  +   PD +T    I   C   ++  A +  + ++ 
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----PHNALLECCCNAGKFFL 391
           +G       +  ++ GLC+VG+   ++  L    G +       ++ +++  C       
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228

Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +  +M  R+I ++  +++  I   C   +++ A  L  +M   ++ PD  T++  V 
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
             CK    ++A      +  Q +  D ++Y+ L++G C V ++  A  +   MS  G + 
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  S+NI+I G C ++ VD+A++L    +         TY  ++ GL K  R    L ++
Sbjct: 349 TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELI 408

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK-AGLVPDRETMLSLLHGLAD 629
             M   G   D+  Y  ++ ++  +N L D A+   + +K  G+ P+  T   L+ GL  
Sbjct: 409 DLMHDRGQQPDIITYSSILDALC-KNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCK 467

Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           G +L    +    L+     L  + Y ++I G    GL  +A  LL  M     +PDA T
Sbjct: 468 GGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAIT 527

Query: 690 HGLLVGS 696
           + +++ S
Sbjct: 528 YEIIICS 534



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 133/556 (23%), Positives = 227/556 (40%), Gaps = 49/556 (8%)

Query: 45  HQTTDYEAKIQSLRHNL---SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCK 101
           HQ  ++  K+ +L  +L   S   LI  L    +  +AL++ + V   K  Q     Y  
Sbjct: 157 HQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVD-GKLVQLDVVMYST 215

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           +I  +    NV +   L   MV  R  +      +L+  F    ++  A+ +   M S  
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 162 FKLSVDVFNVVL------GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
               V  FN+++      G + E K G A        M+K GI P++ T N L++     
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLA-------MMMKQGIKPDIVTYNSLMDGYCLV 328

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N +  A      M  +G     R++ IVI G      VD ++ +  EM    I   +  Y
Sbjct: 329 NEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITY 388

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             +I  LC+  ++  A+ L  +M      PD +TY  +++ LC+N  +D A  +L  +  
Sbjct: 389 NSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKD 448

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GY--VTSPHNALLECCCNAGKFFL 391
            G+ P    +  ++ GLC+ G+ +++ N  ED    GY    + +  +++  C+ G F  
Sbjct: 449 QGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDE 508

Query: 392 AKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +L KM D   I D  ++ I I  L + +E  KA +LL  M+   ++     Y ++ L
Sbjct: 509 ALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSL 568

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK-NGCS 509
                         F    A  L  DS+  +   E     + + E +   C ++K N   
Sbjct: 569 S-------------FMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRD 615

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
                 +++IY  C   K              G     +TYT ++ G        + L +
Sbjct: 616 KDVECPSVIIYSTCDWSK-------------QGYILDVNTYTVMIQGFCSHGLFDESLAL 662

Query: 570 LAQMLVEGCALDVEAY 585
           L++M V GC  D   Y
Sbjct: 663 LSKMEVNGCIPDAVTY 678



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 178/434 (41%), Gaps = 31/434 (7%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           I+  L +       + LF+ M    + P+ + +  LINC C+   +  A  +L  ++ +G
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
             P        ++G C  G+  +++NF           H+ L+     A  F L      
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNF-----------HDKLV-----ALGFHL------ 173

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
                   D  S+   I  LC+  E R A ELL R+    V  D   YS  +   CK  N
Sbjct: 174 --------DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKN 225

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
             DA  ++ ++ ++ +  + ++YS L+ G C V K+ +A+ +F  M+    +    +FNI
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           L+   C   +V +A    ++    G      TY  +M G   +        +L  M   G
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
               V +Y I+I    +   +      F  M    + P+  T  SL+ GL    ++    
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GS 696
             I+ +    +  D   Y+ +++ L K  L  +A  LL  +  +G  P+  T+ +L+ G 
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465

Query: 697 SVGEEIDSRRFAFD 710
             G  ++  R  F+
Sbjct: 466 CKGGRLEDARNIFE 479



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/462 (20%), Positives = 191/462 (41%), Gaps = 50/462 (10%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           +++ + +   +  A D +  M  +    N  T+  +I G     ++ D++ +  +M    
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I  ++  +  ++   C+E +++EA     MM    + PD +TY  L++  C    ++ A 
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECC 383
            IL  M   G+T T   +  ++ G C++   D+++   ++       P    +N+L++  
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 384 CNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C +G+   A  +++ M DR +  D  +++  +  LC+N  + KA  LL ++    + P+ 
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNM 455

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+  + G CK    EDA  +F  +  +   L   +Y+ +++G C      EA+ +   
Sbjct: 456 YTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK 515

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL------RSLAYS---------------- 540
           M  N C   + ++ I+I  L    + DKA +L      R L YS                
Sbjct: 516 MKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPA 575

Query: 541 ---------SGTSYTTSTYTKIMLGLVKLQ--------RAKD------LLVVLAQMLVEG 577
                      +S  +  + K++L  +           R KD      ++        +G
Sbjct: 576 HFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQG 635

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             LDV  Y ++IQ         +     + M   G +PD  T
Sbjct: 636 YILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVT 677



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 121/275 (44%)

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
           N ++  A  L   ++  +  P    +   +    K  +Y   L +F+++  + +  + ++
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           ++ L+   CQ+  I  A  V   + K G    + + N  I G C+  ++ +A+       
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + G      +Y  ++ GL K+   +  L +L ++  +   LDV  Y  +I SM +   + 
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           D    ++ MV   +  +  T  +L+ G     +L       NK+ S++   D   +NIL+
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287

Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +   KEG   +A   L +M+ +G  PD  T+  L+
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 135/566 (23%), Positives = 240/566 (42%), Gaps = 47/566 (8%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
           +L  L+  FV   +   A  VL  M   GF  +V  +N++L  +      F   V + +E
Sbjct: 109 SLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLE-FGKAVSLLRE 167

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M +  ++P+V + N ++    E   +E AL     M   GC  +  T+ I+I       +
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +D+++ +L EM   G++ +L  YT +I   C   +L+    LF  +      P  +TY  
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL------E 366
           LI   C+  RL +A++I E M+  G+ P    +  ++ GLC VGK  E++  L      +
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
           ++   VT  +N ++   C       A  I+E M  R+   D  ++N  +  LC   ++ +
Sbjct: 348 EEPNVVT--YNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDE 405

Query: 426 AYELLGRMVVSSVV--PDCATYSAFVLGKCKLCNYEDALRVF------------------ 465
           A +LL  M+  S    PD  +++A + G CK      AL ++                  
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNIL 465

Query: 466 -----------------RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
                            +Q+S   +V +S +Y+ +++G C+   +  A  + C M  +  
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL 525

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
             S   +N L+  LC    +D+A RL        +     ++  ++ G +K    K    
Sbjct: 526 PPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAES 585

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +L  M   G + D+  Y  LI    +   L +   FF+ M+ +G  PD     S+L    
Sbjct: 586 LLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCI 645

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSM 654
              +   ++  + KLV    VLD  +
Sbjct: 646 SQGETDKLTEFVKKLVDKDVVLDKEL 671



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 123/537 (22%), Positives = 243/537 (45%), Gaps = 45/537 (8%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N ++  +V  +     F F Y++M++     N  +L+ LLE   +  +   A      M 
Sbjct: 76  NNLMATLVRSRNHEVAFSF-YRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALML 134

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K+G   N   + I++KGL  N     +VS+L EM    +  ++  Y  +I   C   +LE
Sbjct: 135 KRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELE 194

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A++L   M+        +T+  LI+  C+  ++D+A  +L++M   GL     V+  ++
Sbjct: 195 KALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254

Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
           RG C+ G+ D                                 K + +++ +R  + C  
Sbjct: 255 RGFCDCGELDR-------------------------------GKALFDEVLERGDSPCAI 283

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  IR  C+   +++A E+   M+   V P+  TY+  + G C +   ++AL++   +
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +    + ++Y+ ++  LC+   + +A+E+   M K      + ++N L+ GLC    +
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403

Query: 529 DKAIRLRSLAYSSGTSYTTS---TYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDV 582
           D+A +L  L     +SYT     ++  ++ GL K   L +A D+  +L + L  G   D+
Sbjct: 404 DEASKLLYLMLKD-SSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAG---DI 459

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
               IL+ S  +   +      +  +  + +VP+ +T  +++ G      L+ V+ G+  
Sbjct: 460 VTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLN-VAKGLLC 518

Query: 643 LVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            +  SE+  S   YN L++ L K+G   QA  L + M      PD  +  +++  S+
Sbjct: 519 KMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSL 575



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 146/635 (22%), Positives = 274/635 (43%), Gaps = 44/635 (6%)

Query: 46  QTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK 105
           ++ ++E      R  L  D  I    N   LS  L+ F    +Q R    A     ++LK
Sbjct: 84  RSRNHEVAFSFYRKMLETDTFI----NFVSLSGLLECF----VQMRKTGFAHGVLALMLK 135

Query: 106 LGLAGNVEE----MEGLCQNM--------VKE-RYPNVREALIS---LVFSFVNHYRVNG 149
            G A NV      ++GLC+N+        ++E R  ++   ++S   ++  F     +  
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A+++   M   G   S+  + +++ A  +  +   + + + KEM   G+  ++     L+
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGK-MDEAMGLLKEMKHKGLEADLIVYTSLI 254

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
               +   ++     F  + ++G  P + T+  +I+G     R+ ++  I   M + G++
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
             +  YT +I  LC   K +EA++L  +M   D  P+ +TY  +IN LC++  + DA +I
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN--FLEDKCGYVTSPH----NALLECC 383
           +E M      P +  +  ++ GLC  G  DE+    +L  K    T P     NAL+   
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434

Query: 384 CNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C   +   A  I + + ++    D  + NI +    ++ ++ KA EL  ++  S +VP+ 
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+  + G CK      A  +  ++    L      Y+ L+  LC+   + +A  +F  
Sbjct: 495 DTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEE 554

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M ++       SFNI+I G      +  A  L      +G S    TY+K++   +KL  
Sbjct: 555 MQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGY 614

Query: 563 AKDLLVVLAQMLVEGCALD------VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
             + +    +M+  G   D      V  YCI   S  E +KL +   F   +V   +V D
Sbjct: 615 LDEAISFFDKMIDSGFEPDAHICDSVLKYCI---SQGETDKLTE---FVKKLVDKDVVLD 668

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           +E   +++  +   S    ++  + ++  D E  D
Sbjct: 669 KELTCTVMDYMCSSSGNMDIAKRLLRVADDKEEGD 703


>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1056

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 265/590 (44%), Gaps = 25/590 (4%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           S DH++R++ +    S AL+ F+W S    F H+  TY  +  KL +    + +  L   
Sbjct: 30  SDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFYKLCVFRRFDTVYQLLDE 89

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSG-GFKLSVDVFNVVLGAIVEEK 180
           M +       +A+   +       R+   +  +V++ S  G K S+ VFN +L  +V+E 
Sbjct: 90  MPESTGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 149

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
              A   F  ++M+ +GI  +  T   L++ L  TNRI       + M   G  PN+  +
Sbjct: 150 IDIAR-EFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVAPNTVVY 208

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
             ++  L  N +V  + S++ EM +     +++F   +I   C E KL +++ L +   +
Sbjct: 209 NTLLHALCKNGKVGRARSLMSEMKEPN---DVTF-NILISAYCNEQKLIQSMVLLEKCFS 264

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD-IVRGLCEVGKFD 359
           L L+PD +T  +++  LC   R+ +A ++LE +   G    D V  + +V+G C VGK  
Sbjct: 265 LGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG-GKVDVVACNTLVKGYCAVGKMR 323

Query: 360 ESVNFLED--KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP-- 413
            +  F ++  + GY+ +   +N L+   C+ G   +    L+   D K  D   WN    
Sbjct: 324 VAQRFFQEMERKGYLPNVETYNLLIAGFCDVG---MLDSALDTFNDMK-TDAIRWNFATF 379

Query: 414 ---IRWLCENEEIRKAYELLGRMVVSSVVPDCA--TYSAFVLGKCKLCNYEDALRVFRQV 468
              IR L          ++L  M  S  V       Y++ + G  K   +EDAL     +
Sbjct: 380 NTLIRGLSVRGRTDDGIKILELMQDSETVHGARIDPYNSVIYGFYKENRWEDALEFL--L 437

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + L   ++  S  +  LC+   + +    +  M+  G   S    + LI+       +
Sbjct: 438 KMEKLFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYM 497

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           ++ + L +   + G    +ST+  +++G  K  +  + +  +  M   GC  D E+Y  L
Sbjct: 498 EETLELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPL 557

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
           ++ +  +  ++   L  ++MV+  +VPD     SL+  L+  + +HL +S
Sbjct: 558 LEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLMFCLSQKTAIHLNTS 607



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 197/467 (42%), Gaps = 7/467 (1%)

Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
           G  P+   F  +I+G          +S++  +   GI+  L  +  I+ +L +E+ ++ A
Sbjct: 95  GLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-IDIA 153

Query: 292 IRLFKM-MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
              F+  M A  +  DE TY  L+  LC   R+ D   +L+ M   G+ P   V+  ++ 
Sbjct: 154 REFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYNTLLH 213

Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK-MADRKIADCDS 409
            LC+ GK   + + + +         N L+   CN  K   +  +LEK  +   + D  +
Sbjct: 214 ALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGLVPDVVT 273

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
               +  LC    + +A E+L R+       D    +  V G C +     A R F+++ 
Sbjct: 274 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQEME 333

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
            +  + +  +Y+ L+ G C V  +  A++ F  M  +    + ++FN LI GL V  + D
Sbjct: 334 RKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSVRGRTD 393

Query: 530 KAIRLRSLAYSSGTSYTT--STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
             I++  L   S T +      Y  ++ G  K  R +D L  L +M  E           
Sbjct: 394 DGIKILELMQDSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSF 451

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
            + S+ E+  + D    ++ M   G VP       L+H  +    +      IN +V+  
Sbjct: 452 KLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVTRG 511

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +  SS +N +I G  KE         ++ M  +G VPD  ++  L+
Sbjct: 512 YLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLL 558



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 6/200 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD-VFNVVLGAIVEEKRGFADFVFVYKEMV 194
           S+++ F    R   A+  L+ M    F  +VD  F ++    + EK G  D    Y +M 
Sbjct: 418 SVIYGFYKENRWEDALEFLLKMEKL-FPRAVDRSFKLI---SLCEKGGMDDVKTAYDQMT 473

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
             G VP+V   + L+    +   +E  L+    M  +G  P S TF  VI G     +V 
Sbjct: 474 GEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVTRGYLPRSSTFNAVIIGFCKEDKVM 533

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           + +  + +M + G   +   Y  ++  LC +  +++A  L  +M    ++PD   +  L+
Sbjct: 534 NGIKFVEDMAERGCVPDRESYNPLLEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLM 593

Query: 315 NCLCENLRLDDANDILEDMI 334
            CL +   +   N  L+D+I
Sbjct: 594 FCLSQKTAI-HLNTSLQDII 612


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 172/362 (47%), Gaps = 5/362 (1%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E+ + G  PNV     L++   +   IE A D F  M K G   N RT+ ++I GL  N 
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
                  +  +M + G+   L  Y C++  LC++ + ++A ++F  MR   +  + +TY 
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI  LC  ++L++AN +++ M   G+ P    +  ++ G C VGK  ++++   D    
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKA 426
             SP    +N L+   C  G    A  ++++M +R I     ++ I I     ++ + KA
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +L   M    +VPD  TYS  + G C      +A R+F+ +  ++   + + Y+ ++ G
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
            C+      A+++   M +   + + +S+  +I  LC  RK  +A RL      SG   +
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547

Query: 547 TS 548
           TS
Sbjct: 548 TS 549



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 209/454 (46%), Gaps = 17/454 (3%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ---FRRMHKKGCCPNSRTFEIVIKG 246
           + EMV  G VP  +  NYLL  +  +    S+ +Q   F   +K     +  +F I+IKG
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGS----SSFNQWWSFFNENKSKVVLDVYSFGILIKG 172

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
                 ++ S  +L E+ + G    +  YT +I   C++ ++E+A  LF  M  L L+ +
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
           E TY  LIN L +N       ++ E M   G+ P    +  ++  LC+ G+  ++    +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292

Query: 367 D------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           +       C  VT  +N L+   C   K   A  ++++M    I  +  ++N  I   C 
Sbjct: 293 EMRERGVSCNIVT--YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++ KA  L   +    + P   TY+  V G C+  +   A ++ +++  + +    ++
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++   + + + +A+++   M + G      ++++LI+G C+  ++++A RL     
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                     Y  ++LG  K   +   L +L +M  +  A +V +Y  +I+ + ++ K K
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
           +       M+ +G+ P   ++LSL+    + S +
Sbjct: 531 EAERLVEKMIDSGIDPST-SILSLISRAKNDSHV 563



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 169/355 (47%), Gaps = 5/355 (1%)

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
           F  +++G CE G+ ++S + L +   +  SP    +  L++ CC  G+   AK +  +M 
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225

Query: 401 DRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
               +A+  ++ + I  L +N   ++ +E+  +M    V P+  TY+  +   CK    +
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285

Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
           DA +VF ++  + +  + ++Y+ L+ GLC+  K+ EA +V   M  +G + +  ++N LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
            G C + K+ KA+ L     S G S +  TY  ++ G  +         ++ +M   G  
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405

Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
                Y ILI + +  + ++        M + GLVPD  T   L+HG     Q++  S  
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +V  +   +  +YN +I G  KEG + +A  LL  M  K   P+  ++  ++
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 100/218 (45%), Gaps = 5/218 (2%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE--EKRGFADFVFVYKEM 193
           +L+  F    ++  A+ +  ++ S G   S+  +N+++       +  G A  V   KEM
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV---KEM 399

Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
            + GI P+  T   L++    ++ +E A+     M + G  P+  T+ ++I G     ++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
           +++  +   M +   +     Y  +I   C+E     A++L K M   +L P+  +Y  +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           I  LC+  +  +A  ++E MI  G+ P+  +   I R 
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/245 (20%), Positives = 108/245 (44%), Gaps = 1/245 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+       ++N A +V+  M S G   ++  +N ++       +     + + +++  
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK-LGKALSLCRDLKS 366

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+ P++ T N L+           A    + M ++G  P+  T+ I+I     +  ++ 
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +   M +LG+  ++  Y+ +I   C + ++ EA RLFK M   +  P+E+ Y  +I 
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C+      A  +L++M    L P    +  ++  LC+  K  E+   +E        P
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

Query: 376 HNALL 380
             ++L
Sbjct: 547 STSIL 551



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 6/189 (3%)

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVL 570
           SF ILI G C   +++K+  L       G S     YT ++ G  K   +++AKDL   +
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            ++   G   +   Y +LI  + +    K     +  M + G+ P+  T   +++ L   
Sbjct: 225 GKL---GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
            +        +++       +   YN LI GL +E   ++A+ ++D M   G  P+  T+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 691 GLLVGSSVG 699
             L+    G
Sbjct: 342 NTLIDGFCG 350


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 238/550 (43%), Gaps = 57/550 (10%)

Query: 82  IFKWV-SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERY------------- 127
           +FKW+ S    ++H+  +   MI  L    +++  + L + +    +             
Sbjct: 63  LFKWIESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRL 122

Query: 128 ---PNVREALIS-LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
              P++   + S LV  + N      A++V  +M   GF+  +    V+L ++ +++   
Sbjct: 123 HDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDR--L 180

Query: 184 ADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            D V+ VYK+M + G+  N+   N L+    ++  +E A +    M  K   P+  T+  
Sbjct: 181 TDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNT 240

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I          +++S+   M   GI+ ++  Y  +I   C+E ++ EA+RLFK +R  D
Sbjct: 241 LISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--D 298

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ +TY  LI+  C    LD A  + E+M   GL PT   +  I+R LCE+G+  +  
Sbjct: 299 ATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRD-- 356

Query: 363 NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
                                        A  +L +M+++KI  D  + N  I   C+  
Sbjct: 357 -----------------------------ANKLLNEMSEKKIEPDNVTCNTLINAYCKIG 387

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
           +++ A ++  RMV + +  D  TY A + G CK+   + A  +   +          +YS
Sbjct: 388 DMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYS 447

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            LV+G C  +     +++     + G  +  S +  LI   C   +VD A ++ SL    
Sbjct: 448 WLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEK 507

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           GT   +  YT +     KL +A     +L +M      + ++ Y  L  S +  N +   
Sbjct: 508 GTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSI--L 565

Query: 602 ALFFNVMVKA 611
           +LF+N +V A
Sbjct: 566 SLFWNHVVAA 575



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 171/398 (42%), Gaps = 7/398 (1%)

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +EAI++F+ M      P       L+N L ++   D    + + M  IG+     V+  +
Sbjct: 147 QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVL 206

Query: 349 VRGLCEVGKFDESVNFL---EDKCGYVT-SPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +   C+ G  +++ N L   E KC +     +N L+   C  G  + A  + ++M    I
Sbjct: 207 IHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGI 266

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  ++N  I   C+   +R+A  L     +    P+  TY+  + G C+L + + ALR
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLFKE--IRDATPNHVTYTTLIDGYCRLNDLDQALR 324

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
           +  ++ AQ L    ++Y+ ++  LC++ +I +A ++   MS+      + + N LI   C
Sbjct: 325 LREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYC 384

Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
            +  +  A+++++    +G      TY  ++ G  K++       +L  ML  G +    
Sbjct: 385 KIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYC 444

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
            Y  L+     Q   +      +  V+ GL  D+    +L+       Q+       + +
Sbjct: 445 TYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLM 504

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
                + DS +Y  L    WK G  + AS LLD M  +
Sbjct: 505 QEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKR 542


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/527 (21%), Positives = 243/527 (46%), Gaps = 12/527 (2%)

Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
           A RVL  M   G + +   +N ++         + + V V+K+M   G++P VD  N  +
Sbjct: 299 AERVLEQMVEAGTRPNSITYNSLIHGYSISGM-WNESVRVFKQMSSCGVIPTVDNCNSFI 357

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL--- 266
             LF+  R   A   F  M  KG  P+  ++       +    V     +   +F+L   
Sbjct: 358 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYS-TNASWVCYWYVTVVWVMWHNIFNLMLT 416

Query: 267 -GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            GI      +  +I    R   +++A+ +F+ M+   ++PD +T+  +I+ LC   RLDD
Sbjct: 417 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 476

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP-----HNALL 380
           A      M+ IG+ P++ V+  +++G C  G+  ++   + +       P      ++++
Sbjct: 477 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 536

Query: 381 ECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
              C  G+    K I++ M    +  +  ++N  +   C    + +A+ LL  M    + 
Sbjct: 537 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 596

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           P+C  Y   V G CK    +DAL VFR +  + +   S+ YS ++ GL Q  + T A ++
Sbjct: 597 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 656

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M ++G ++S  ++ +++ GLC     D+A  L    ++    +   T+  ++  + K
Sbjct: 657 FHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFK 716

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           + R ++   +   +   G   +++ Y ++I ++ ++   ++    F  + K+G   D   
Sbjct: 717 VGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRL 776

Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
           +  ++  L + +++   S+ ++ +  ++  L++S  ++L +   +EG
Sbjct: 777 LNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 823



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 121/581 (20%), Positives = 235/581 (40%), Gaps = 80/581 (13%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P + T N L++     +R +  L    R+ K G  P+  ++ + I G + +  VD +  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKAHCL 232

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
             EM + G+  ++     II  LC+  ++++A  + + M    + PD  TY  +I+ LC+
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSPHN 377
           +  +D A  +LE M+  G  P    +  ++ G    G ++ESV   +    CG + +  N
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 378 --ALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRWLC---------------- 418
             + +      G+   AKCI + M  +    D  S++    W+C                
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFN 412

Query: 419 --------ENEEI--------------RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
                    N+ +               KA  +   M    ++PD  T++  +   C++ 
Sbjct: 413 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 472

Query: 457 NYEDALRVFRQ--------------------------VSAQSLVLDSIS----------Y 480
             +DAL  F                            V A+ L+ + ++          +
Sbjct: 473 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 532

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           S ++  LC+  ++ E  ++   M + G   +  +FN L+ G C++  +++A  L     S
Sbjct: 533 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 592

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G       Y  ++ G  K  R  D L V   ML +G       Y I++  + +  +   
Sbjct: 593 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 652

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M+++G      T   +L GL   +     +  + KL + +   D   +NI+I+
Sbjct: 653 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 712

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
            ++K G   +A  L D +   G VP+  T+ +++ + + EE
Sbjct: 713 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 753



 Score = 45.8 bits (107), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 163 KLSVDVFNVVLGAIV-----EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           K  +  FN+V+ A+      +E +   D +  Y      G+VPN+ T + ++  L +   
Sbjct: 701 KFDIITFNIVISAMFKVGRRQEAKELFDAISTY------GLVPNIQTYSMMITNLIKEES 754

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            E A + F  + K G   +SR    +++ L+  + V  + + L  + +  + LE S  + 
Sbjct: 755 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISL 814

Query: 278 IIPMLCRENKLEEAIRLF 295
           +  +  RE K  E I+L 
Sbjct: 815 LASLFSREGKYREHIKLL 832


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 187/400 (46%), Gaps = 7/400 (1%)

Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           KRG   +   + ++M + G   N  T N L+  L     +  +L    +  KKG  PN  
Sbjct: 144 KRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVF 203

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+  +++        D+++ +L E+   G +  L  Y  ++  LC+E + EEA++ F+ +
Sbjct: 204 TYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDL 263

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
            +    P+ ++Y  L+  LC   R + A ++L +M     +P+   F  ++  L   G+ 
Sbjct: 264 PSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQT 323

Query: 359 DESVNFLED----KCGYVTSPHNALLECCCNAGKF-FLAKCILEKMADRKIADCDSWNIP 413
           D+++  L+D    +     + +N ++   C  GK   + KC+ + M  R   +  ++N  
Sbjct: 324 DQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA- 382

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I  LCE  ++++A+ ++  +           Y   +   C+  N   A ++  +++    
Sbjct: 383 IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGF 442

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           V DS +YS L+ GLC    + EA+E+F  M +N C     +FN LI GLC  RK D ++ 
Sbjct: 443 VPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLM 502

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           +  +    G     +TYT I+ G+   +  +    VL ++
Sbjct: 503 VFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 182/400 (45%), Gaps = 7/400 (1%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           LV +      V  AM+++  M   G+  +   +N ++  +       +  + +  + +K 
Sbjct: 138 LVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGN-LSQSLQILDKFMKK 196

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
           G+VPNV T ++LLE  ++    + A+     +  KG  PN  ++ +++ GL    R +++
Sbjct: 197 GLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +    ++   G    +  Y  ++  LC E + E+A  L   M   +  P  +T+  LI  
Sbjct: 257 MQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGS 316

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYV 372
           L  + + D A ++L+DM       T   +  I+  LC+ GK D  V  L+     +C   
Sbjct: 317 LALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPN 376

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLG 431
              +NA +   C  GK   A  I++ + +++ +   D +   I  LC       A++LL 
Sbjct: 377 EGTYNA-IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLY 435

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M     VPD  TYS+ + G C     ++A+ +F  +       D  +++ L+ GLC+  
Sbjct: 436 EMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCR 495

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
           K   ++ VF  M K G   + +++ I++ G+    +++ A
Sbjct: 496 KTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELA 535



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 207/491 (42%), Gaps = 73/491 (14%)

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R++D+   L  M   G + +    T ++  LC+ NK+ +A ++ ++M      PD  +  
Sbjct: 77  RLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCT 136

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDV-FVDIVRGLCEVGKFDESVNFLED--K 368
            L+N LC+   +  A  ++E M   G  PT+ V +  +VRGLC  G   +S+  L+   K
Sbjct: 137 FLVNNLCKRGNVGYAMQLVEKMEEYGY-PTNTVTYNSLVRGLCMHGNLSQSLQILDKFMK 195

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
            G V +               F    +LE     + AD              E IR    
Sbjct: 196 KGLVPN--------------VFTYSFLLEAAYKERGAD--------------EAIR---- 223

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           LL  +V     P+  +Y+  + G CK    E+A++ FR + ++    + +SY+ L+  LC
Sbjct: 224 LLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLC 283

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
              +  +A E+   M     S S  +FNILI  L +  + D+A+ +      +    T +
Sbjct: 284 YEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAA 343

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGC--------ALDV--------EAYCILIQSM 592
           +Y  I+  L K  +   ++  L QM+   C        A+ V        EA+ I IQS+
Sbjct: 344 SYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSI-IQSL 402

Query: 593 SEQNKLKDCALFFNV-------------------MVKAGLVPDRETMLSLLHGLADGSQL 633
             +        +  V                   M K G VPD  T  SL+ GL     L
Sbjct: 403 GNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGML 462

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
                  + +  +    D   +N LI GL K   T  +  + ++M+ KG++P+ TT+ ++
Sbjct: 463 DEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTII 522

Query: 694 V-GSSVGEEID 703
           V G +  EE++
Sbjct: 523 VEGIAHQEEME 533



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/480 (20%), Positives = 205/480 (42%), Gaps = 7/480 (1%)

Query: 187 VFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            F+Y E M+  G  P+      L+  L ++N++  A      M   G  P+  +   ++ 
Sbjct: 81  AFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVN 140

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L     V  ++ ++ +M + G       Y  ++  LC    L +++++        L+P
Sbjct: 141 NLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVP 200

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           +  TY  L+    +    D+A  +L++++  G  P    +  ++ GLC+ G+ +E++ F 
Sbjct: 201 NVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFF 260

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCEN 420
            D      SP    +N LL   C  G++  AK +L +M    +     ++NI I  L  +
Sbjct: 261 RDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALH 320

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
            +  +A E+L  M  +      A+Y+  +   CK    +  ++   Q+  +    +  +Y
Sbjct: 321 GQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTY 380

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + +   LC+  K+ EA  +   +     S +   +  +I  LC       A +L      
Sbjct: 381 NAIAV-LCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTK 439

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G    + TY+ ++ GL       + + + + M    C  DV+ +  LI  + +  K   
Sbjct: 440 YGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDL 499

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
             + F +MVK G +P+  T   ++ G+A   ++ L ++ + +L     V  S++  +++ 
Sbjct: 500 SLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQAVGRSTLERLVMQ 559


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 138/579 (23%), Positives = 240/579 (41%), Gaps = 74/579 (12%)

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY--------- 190
           +F+N   ++G +   V M   GF   V    +        KRGFA  V+ +         
Sbjct: 103 TFINFVSLSGLLECYVQMRKTGFAFGVLALML--------KRGFAFNVYNHNILLKGLCR 154

Query: 191 -----------KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
                      +EM +  ++P+V + N ++    E   +E AL+    M   GC  +  T
Sbjct: 155 NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVT 214

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           + I+I       ++D+++  L EM  +G++ +L  YT +I   C   +L+    LF  + 
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL 274

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                P  +TY  LI   C+  +L +A++I E MI  G+ P    +  ++ GLC VGK  
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334

Query: 360 ESVNFL------EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
           E++  L      +++   VT  +N ++   C  G    A  I+E M  R+   D  ++NI
Sbjct: 335 EALQPLNLMIEKDEEPNAVT--YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVV--PDCATYSAFVLGKCKLCNYEDALRVF----- 465
            +  LC   ++ +A +LL  M+  S    PD  +Y+A + G CK      AL ++     
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452

Query: 466 ------------------------------RQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                                         +Q+S   +V +S +Y+ +++G C+   +  
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  + C M  +    S   +N L+  LC    +D+A RL              ++  ++ 
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G +K    K    +L  M   G + D+  Y  LI    +   L +   FF+ MV +G  P
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
           D     S+L       +   ++  + KLV    VLD  +
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 232/516 (44%), Gaps = 42/516 (8%)

Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
           Y++M++     N  +L+ LLE   +  +   A      M K+G   N     I++KGL  
Sbjct: 95  YRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR 154

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
           N     +VS+L EM    +  ++  Y  +I   C   +LE+A+ L   M+        +T
Sbjct: 155 NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVT 214

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           +  LI+  C+  ++D+A   L++M  +GL     V+  ++RG C+ G+ D          
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR--------- 265

Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYE 428
                                  K + +++ +R  + C  ++N  IR  C+  ++++A E
Sbjct: 266 ----------------------GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           +   M+   V P+  TY+  + G C +   ++AL+    +  +    ++++Y+ ++  LC
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLC 363

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY--SSGTSYT 546
           +   + +AVE+   M K      + ++NIL+ GLC    +D+A +L  L    SS T   
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423

Query: 547 TSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
             +Y  ++ GL K   L +A D+  +L + L  G   D     IL+ S  +   +     
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAME 480

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGL 662
            +  +  + +V + +T  +++ G      L+ V+ G+   +  SE+  S   YN L++ L
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLN-VAKGLLCKMRVSELQPSVFDYNCLLSSL 539

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
            KEG   QA  L + M      PD  +  +++  S+
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 149/661 (22%), Positives = 280/661 (42%), Gaps = 54/661 (8%)

Query: 25  SSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFK 84
            ++   +++  +    M K  ++ ++E      R  L  D  I    N   LS  L+ + 
Sbjct: 63  QAVDSGSSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFI----NFVSLSGLLECY- 117

Query: 85  WVSIQKRFQHTADTYCKMILKLGLAGNVEE----MEGLCQNMVKERYPNV-----REALI 135
              +Q R    A     ++LK G A NV      ++GLC+N+   +  ++     R +L+
Sbjct: 118 ---VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM 174

Query: 136 SLVFSFVNHYR-------VNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGF 183
             VFS+    R       +  A+ +   M   G   S+  + +++ A      ++E  GF
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                  KEM   G+  ++     L+    +   ++     F  + ++G  P + T+  +
Sbjct: 235 ------LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I+G     ++ ++  I   M + G++  +  YT +I  LC   K +EA++   +M   D 
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDE 348

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+ +TY  +IN LC++  + DA +I+E M      P +  +  ++ GLC  G  DE+  
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408

Query: 364 --FLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNIPIRW 416
             +L  K    T P    +NAL+   C   +   A  I + + ++    D  + NI +  
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
             +  ++ KA EL  ++  S +V +  TY+A + G CK      A  +  ++    L   
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
              Y+ L+  LC+   + +A  +F  M ++       SFNI+I G      +  A  L  
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD------VEAYCILIQ 590
               +G S    TY+K++   +KL    + +    +M+  G   D      V  YCI   
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI--- 645

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
           S  E +KL +       +V   +V D+E   +++  + + S    ++  + ++  D E  
Sbjct: 646 SQGETDKLTE---LVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEER 702

Query: 651 D 651
           D
Sbjct: 703 D 703



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 6/286 (2%)

Query: 414 IRWLCE--NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK-CKLCNYEDALRVFRQVSA 470
           +R LCE  N +++ A  +  + V S      A   + ++ K  +  N+E A   +R++  
Sbjct: 43  LRSLCEDSNPQLKNAVSVFQQAVDSG--SSLAFAGSNLMAKLVRSRNHELAFSFYRKMLE 100

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
               ++ +S S L+E   Q+ K   A  V   M K G + +  + NIL+ GLC   +  K
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           A+ L      +       +Y  ++ G  + +  +  L +  +M   GC+  +  + ILI 
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
           +  +  K+ +   F   M   GL  D     SL+ G  D  +L    +  ++++   +  
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-GLLVG 695
            +  YN LI G  K G   +AS + + M+ +G  P+  T+ GL+ G
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 214/457 (46%), Gaps = 13/457 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L +  + K  +   V + + +    I P+  TLN L+       +I  A     ++
Sbjct: 66  FNKILDSFAKMKH-YPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKI 124

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  P++ T   +IKGL    +V  ++    ++   G +L+   Y  +I  +C+  + 
Sbjct: 125 LKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGET 184

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI+L + +      P+ + Y  +I+CLC+   + +A ++  +M V G++     +  I
Sbjct: 185 RAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAI 244

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           + G C VGK  E++ FL +      +P    +N L++     GK   AK +L  +    +
Sbjct: 245 IHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI----V 300

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
             C   N+       +   +  +  +G M    V PD  +Y+  +   CK+   E+AL +
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLM---GVTPDVWSYNIMINRLCKIKRVEEALNL 357

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           ++++  +++V ++++Y+ L++GLC+  +I+ A ++   M   G   +  ++N LI GLC 
Sbjct: 358 YKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCK 417

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV-KLQRAKDLLVVLAQMLVEGCALDVE 583
             ++DKAI L +     G      T   ++ GL+ K +R K+   +   +L +G   +V 
Sbjct: 418 NGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVY 477

Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
            Y I+I    ++  L +     + M  +G  P+  T 
Sbjct: 478 TYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITF 514



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 213/516 (41%), Gaps = 49/516 (9%)

Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
           D +F +  M+     P +   N +L+   +     + +   RR+  K   P+  T  I+I
Sbjct: 46  DALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILI 105

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                  +++ + S+L ++   G Q +    T +I  LC + ++++A+     + A    
Sbjct: 106 NCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFR 165

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
            D+++Y  LIN                                   G+C++G+   ++  
Sbjct: 166 LDQVSYGTLIN-----------------------------------GVCKIGETRAAIQL 190

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
           L    G +T P    +N +++C C       A  +  +M+ + I A+  +++  I   C 
Sbjct: 191 LRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCI 250

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             ++ +A   L  MV+ ++ PD   Y+  V    K    ++A  V   +    L  + I+
Sbjct: 251 VGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVIT 310

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ L++G         A  VF  +   G +    S+NI+I  LC +++V++A+ L    +
Sbjct: 311 YNTLIDGY--------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMH 362

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
                  T TY  ++ GL K  R      ++ +M   G   +V  Y  LI  + +  +L 
Sbjct: 363 QKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLD 422

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGL-ADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                 N M   G+ PD  T+  LLHGL   G +L         L+      +   YNI+
Sbjct: 423 KAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNII 482

Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           I G  KEGL  +A  L   M   G  P+A T  +++
Sbjct: 483 IYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIII 518



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 37/206 (17%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +N+++  + + KR   + + +YKEM +  +VPN  T N L++ L ++ RI  A D    M
Sbjct: 338 YNIMINRLCKIKR-VEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM 396

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF-------------- 274
           H +G   N  T+  +I GL  N ++D +++++ +M D GIQ ++                
Sbjct: 397 HDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKR 456

Query: 275 ----------------------YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
                                 Y  II   C+E  L+EA  L   M      P+ +T++ 
Sbjct: 457 LKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKI 516

Query: 313 LINCLCENLRLDDANDILEDMIVIGL 338
           +I  L E    D A  +L +MI  GL
Sbjct: 517 IICALLEKGETDKAEKLLCEMIARGL 542



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 119/274 (43%)

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
           E +  A     RM+     P    ++  +    K+ +Y   + + R++  +++  D  + 
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + L+   C + +I  A  V   + K G    + +   LI GLC+  +V KA+       +
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G      +Y  ++ G+ K+   +  + +L ++       +V  Y  +I  + ++  + +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
               F+ M   G+  +  T  +++HG     +L      +N++V  +   D  +YN L++
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            L KEG   +A  +L +++     P+  T+  L+
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLI 315



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 85/193 (44%), Gaps = 1/193 (0%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           +  AL ++K +  QK       TY  +I  L  +G +     L   M    +        
Sbjct: 351 VEEALNLYKEMH-QKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYN 409

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+     + +++ A+ ++  M   G +  +   N++L  ++ + +   +   ++++++ 
Sbjct: 410 SLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLD 469

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G  PNV T N ++    +   ++ A     +M   GC PN+ TF+I+I  L+     D 
Sbjct: 470 KGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDK 529

Query: 256 SVSILGEMFDLGI 268
           +  +L EM   G+
Sbjct: 530 AEKLLCEMIARGL 542



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 6/210 (2%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           +Y  MI +L     VEE   L + M  K   PN      SL+       R++ A  ++  
Sbjct: 337 SYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNT-VTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLE-VLFE 214
           M+  G   +V  +N ++  +   K G  D  + +  +M   GI P++ TLN LL  +L +
Sbjct: 396 MHDRGHHANVITYNSLINGLC--KNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
             R+++A   F+ +  KG  PN  T+ I+I G      +D++ ++  +M D G       
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAIT 513

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
           +  II  L  + + ++A +L   M A  L+
Sbjct: 514 FKIIICALLEKGETDKAEKLLCEMIARGLL 543


>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
 gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
 gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
 gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 757

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 228/504 (45%), Gaps = 22/504 (4%)

Query: 50  YEAKIQSLRHNLSP--DH--LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK 105
           +  ++Q+   +L P  DH  +  VL     L  AL+ F+W       +H  DT+ KMI  
Sbjct: 100 WTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKM 159

Query: 106 LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
           LG    +     +  +M ++  P   +  + L+ S+     V  ++++   M   G + +
Sbjct: 160 LGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERT 219

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           +  +N +   I+   R      + + +MV  G+ P   T N +L   F + R+E+AL  F
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRY-FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 278

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             M  +G  P+  TF  +I G     ++D++  +  EM    I   +  YT +I      
Sbjct: 279 EDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAV 338

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD-V 344
           +++++ +R+F+ MR+  + P+  TY  L+  LC+  ++ +A +IL++M+   + P D+ +
Sbjct: 339 DRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI 398

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLAKCILEKM 399
           F+ ++    + G    +   L+     +  P  A     L+E  C A  +  A  +L+ +
Sbjct: 399 FLKLLVSQSKAGDMAAATEVLK-AMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTL 457

Query: 400 ADRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            +++I          +  ++N  I +LC N +  KA E+L R ++   V D    +  + 
Sbjct: 458 IEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKA-EVLFRQLMKRGVQDQDALNNLIR 516

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  K  N + +  + + +S + +  +S +Y  L++      +  +A      M ++G   
Sbjct: 517 GHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP 576

Query: 511 SSSSFNILIYGLCVMRKVDKAIRL 534
            SS F  +I  L    +V  A R+
Sbjct: 577 DSSLFRSVIESLFEDGRVQTASRV 600



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/493 (22%), Positives = 206/493 (41%), Gaps = 58/493 (11%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFR 226
           V+NV+ GA   +K   A   F + E  ++G++  + DT   ++++L E +++  A     
Sbjct: 120 VYNVLHGA---KKLEHALQFFRWTE--RSGLIRHDRDTHMKMIKMLGEVSKLNHARCILL 174

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M +KG   +   F ++I+       V +SV I  +M DLG++  +  Y  +  ++ R  
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +   A R F  M +  + P   TY  ++     +LRL+ A    EDM   G++P D  F 
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294

Query: 347 DIVRGLCEVGKFDESVN-FLEDKC---------------GYV------------------ 372
            ++ G C   K DE+   F+E K                GY+                  
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354

Query: 373 -----TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE---EIR 424
                 + ++ LL   C+AGK   AK IL+ M  + IA  D+ +I ++ L       ++ 
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN-SIFLKLLVSQSKAGDMA 413

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL--------D 476
            A E+L  M   +V  +   Y   +  +CK   Y  A+++   +  + ++L        +
Sbjct: 414 AATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEME 473

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
             +Y+ ++E LC   +  +A  +F  + K G      + N LI G       D +  +  
Sbjct: 474 PSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILK 532

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
           +    G    ++ Y  ++   +      D    L  M+ +G   D   +  +I+S+ E  
Sbjct: 533 IMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDG 592

Query: 597 KLKDCALFFNVMV 609
           +++  +    +M+
Sbjct: 593 RVQTASRVMMIMI 605



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/523 (21%), Positives = 223/523 (42%), Gaps = 46/523 (8%)

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIAN----SRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
            R   ++G   N    E  I  ++ N    +R+ +S+  L   +D         ++ +  
Sbjct: 72  LRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWD---------HSLVYN 122

Query: 281 MLCRENKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
           +L    KLE A++ F+   R+  +  D  T+ ++I  L E  +L+ A  IL DM   G+ 
Sbjct: 123 VLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVP 182

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCI 395
             +D+FV ++    + G   ESV   +             +N+L +     G++ +AK  
Sbjct: 183 WDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRY 242

Query: 396 LEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
             KM    +     ++N+ +     +  +  A      M    + PD AT++  + G C+
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               ++A ++F ++    +    +SY+ +++G   V+++ + + +F  M  +G   ++++
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362

Query: 515 FNILIYGLCVMRKVDKAIR-LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV---VL 570
           ++ L+ GLC   K+ +A   L+++          S + K+   LV   +A D+     VL
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKL---LVSQSKAGDMAAATEVL 419

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
             M       +   Y +LI++  + +         + +++  ++   +  L +     + 
Sbjct: 420 KAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNP 479

Query: 631 SQLHLVSSGINKLVSDSEVL----------DSSMYNILINGLWKEGLTSQASYLLDLMLG 680
              +L ++G     + +EVL          D    N LI G  KEG    +  +L +M  
Sbjct: 480 IIEYLCNNG---QTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSR 536

Query: 681 KGWVPDATTHGLLVGS--SVGEEIDSRRFAFDS----SSFPDS 717
           +G   ++  + LL+ S  S GE  D+ + A DS       PDS
Sbjct: 537 RGVPRESNAYELLIKSYMSKGEPGDA-KTALDSMVEDGHVPDS 578


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 230/537 (42%), Gaps = 45/537 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+K G  PN    N L+           A    +RM   GC P    + I I  +     
Sbjct: 168 MMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEE 227

Query: 253 VD--DSVSILGEMFDLGIQLELSFYTCIIPM---------LCRENKLEEAIRLFKMMRAL 301
           +   D +++  ++++     E+   +C++           LC   K + A ++ K+M   
Sbjct: 228 LPSPDLLALAEKVYE-----EMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK 282

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
             +PD  TY ++I  LCE ++++ A  + ++M  +G+ P    +  ++   C+ G  +++
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342

Query: 362 VNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIP 413
            ++ ++     C      + ALL     A +   A  I  +M D   A C     +++  
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID---AGCPPNTITYSAL 399

Query: 414 IRWLCENEEIRKAYELLGRMV----------------VSSVVPDCATYSAFVLGKCKLCN 457
           +  LC+  EI+KA E+  +++                  S+ P+  TY A + G CK   
Sbjct: 400 VDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHK 459

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
             DA  +   + +     + I Y  L++G C+V KI  A EVF  MSK G   +  ++  
Sbjct: 460 VVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTS 519

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           LI  +   R++D A+++ S    S  +    TYT ++ GL ++   +  L +L+ M  +G
Sbjct: 520 LIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKG 579

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
           C+ +V  Y  LI  + +  K+      F  M   G  P+  T   L++       L    
Sbjct: 580 CSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAH 639

Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           S ++++           Y  ++ G  K+ + S    LL+ +   G VP A  +GLL+
Sbjct: 640 SLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLG--LLEELESHGTVPIAPVYGLLI 694



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 143/616 (23%), Positives = 255/616 (41%), Gaps = 61/616 (9%)

Query: 117 GLCQ---NMVKERYPNVREALI-SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
           G C+   NM+ +   N   +L  SLV S+ N      A ++L  M   G       +N+ 
Sbjct: 159 GWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIF 218

Query: 173 LGAIVE-EKRGFADFVF----VYKEMVKAGIVPN-VDTLNYLLEVLFETNRIESALDQFR 226
           +G+I   E+    D +     VY+EM+ +  V N V+T N+    L    + + A    +
Sbjct: 219 IGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA-RCLCGMGKFDMAFQIIK 277

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M  KG  P++ T+  VI  L    +V+ +  +  EM  +G+  ++  YT +I   C+  
Sbjct: 278 VMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAG 337

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
            +E+A   F  MR++    + +TY  L++   +  +L  A+DI   MI  G  P    + 
Sbjct: 338 LIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYS 397

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
            +V GLC+ G+  ++              +  L+    N G  F  +    K  D    +
Sbjct: 398 ALVDGLCKAGEIQKACEV-----------YTKLIGTSDNVGSDFYFE---GKHTDSIAPN 443

Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
             ++   I  LC+  ++  A ELL  M+ +   P+   Y A + G CK+   ++A  VF 
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           ++S    +    +Y+ L++ + +  ++  A++V   M ++ C+ +  ++  +I GLC + 
Sbjct: 504 RMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG 563

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           +  KA++L S+    G S    TYT ++ GL K  +    L +  QM  +GCA +   Y 
Sbjct: 564 ECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYR 623

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKA---------------------------------GL 613
           +LI        L +     + M +                                  G 
Sbjct: 624 VLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGT 683

Query: 614 VPDRETMLSLLHGLADGSQLHL---VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
           VP       L+   +   +L     +   + +L S   +    MY  LI  L       +
Sbjct: 684 VPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEK 743

Query: 671 ASYLLDLMLGKGWVPD 686
           A  L   +  KG VP+
Sbjct: 744 AFELYSEITRKGVVPE 759



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/536 (20%), Positives = 230/536 (42%), Gaps = 87/536 (16%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           + + A +++  M   GF      ++ V+  + E  +    F+ +++EM   G+ P+V T 
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFL-LFQEMKSVGVNPDVYTY 326

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             L++   +   IE A   F  M   GC  N  T+  ++   +   ++  +  I   M D
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALD---------------LMPDELT 309
            G       Y+ ++  LC+  ++++A  ++ K++   D               + P+ +T
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVT 446

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD--ESVNFLED 367
           Y  LI+ LC+  ++ DA ++L+ M+  G  P   ++  ++ G C+VGK D  + V     
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
           KCGY+ + H                                ++   I  + ++  +  A 
Sbjct: 507 KCGYLPTVH--------------------------------TYTSLIDAMFKDRRLDLAM 534

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           ++L +MV SS  P+  TY+A + G C++   + AL++   +  +    + ++Y+ L++GL
Sbjct: 535 KVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGL 594

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS----------- 536
            +  K+  ++++F  MS  GC+ +  ++ +LI   C    +D+A  L S           
Sbjct: 595 GKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYL 654

Query: 537 LAY----------------------SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
             Y                      S GT      Y  ++    K  R ++ L +  +M+
Sbjct: 655 QGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMM 714

Query: 575 VEGCALDVEA---YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
               +L++ +   Y  LIQ++   ++L+     ++ + + G+VP+    + L+ GL
Sbjct: 715 ELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGL 770



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 127/565 (22%), Positives = 227/565 (40%), Gaps = 65/565 (11%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           E+   G  P+  T N L++VL    +++      + M + G C +  T     + L    
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           R  D++ ++ E  D   +L+    T +I  L   +  +EAI     MR    +P+ +TY 
Sbjct: 90  RWSDALVMI-EREDF--KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-------- 363
            L+    +  +L     I+  M+  G  P   +F  +V   C    +  +          
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 364 -----------FLEDKCGYVTSPHNALL--------------------------ECCCNA 386
                      F+   CG    P   LL                           C C  
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 387 GKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
           GKF +A  I++ M  +  + D  +++  I +LCE  ++ KA+ L   M    V PD  TY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  +   CK    E A   F ++ +     + ++Y+ L+    + +++ +A ++F  M  
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKA----IRLRSLAYSSGTSY------------TTST 549
            GC  ++ +++ L+ GLC   ++ KA     +L   + + G+ +               T
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVT 446

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ GL K  +  D   +L  ML  GC  +   Y  LI    +  K+ +    F  M 
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G +P   T  SL+  +    +L L    ++++V  S   +   Y  +I+GL + G   
Sbjct: 507 KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQ 566

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           +A  LL +M  KG  P+  T+  L+
Sbjct: 567 KALKLLSMMEEKGCSPNVVTYTALI 591



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 126/538 (23%), Positives = 227/538 (42%), Gaps = 30/538 (5%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK 124
           +  R L        A +I K V + K F     TY K+I  L  A  VE+   L Q M  
Sbjct: 258 NFARCLCGMGKFDMAFQIIK-VMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 316

Query: 125 ERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               P+V    I L+ SF     +  A      M S G   +V  +  +L A ++ K+  
Sbjct: 317 VGVNPDVYTYTI-LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQ-L 374

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM--------------- 228
                ++  M+ AG  PN  T + L++ L +   I+ A + + ++               
Sbjct: 375 PQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEG 434

Query: 229 -HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
            H     PN  T+  +I GL    +V D+  +L  M   G +     Y  +I   C+  K
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           ++ A  +F  M     +P   TY  LI+ + ++ RLD A  +L  M+    TP    +  
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTA 554

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++ GLC +G+  +++  L    E  C      + AL++    +GK  L+  +  +M+ + 
Sbjct: 555 MIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614

Query: 404 IA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            A +  ++ + I   C    + +A+ LL  M  +        Y + V G  K   +  +L
Sbjct: 615 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASL 672

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS---FNILI 519
            +  ++ +   V  +  Y  L++   +  ++ EA+E+   M +   SL+ +S   +  LI
Sbjct: 673 GLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLI 732

Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
             LC+  +++KA  L S     G     S +  ++ GL+K+ +  + L +   +  EG
Sbjct: 733 QALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 108/282 (38%), Gaps = 14/282 (4%)

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
           +++A+    ++   S + + ++Y  L+ G  + +++     +   M K GC+ + S FN 
Sbjct: 123 FDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNS 182

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLV----VL 570
           L++  C  R    A +L       G       Y  I +G +   +   + DLL     V 
Sbjct: 183 LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYN-IFIGSICGGEELPSPDLLALAEKVY 241

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
            +ML   C L+        + +    K         VM+  G VPD  T   ++  L + 
Sbjct: 242 EEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEA 301

Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT- 689
            ++        ++ S     D   Y ILI+   K GL  QA    D M   G   +  T 
Sbjct: 302 MKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTY 361

Query: 690 ----HGLLVGSSVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
               H  L    + +  D      D+   P++++   L +GL
Sbjct: 362 TALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 7/209 (3%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L  +  +  +L++F  +S  K       TY  +I     AG ++E   L   M + 
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQMST-KGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 648

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            +P   +   S+V  F   +    ++ +L  + S G      V+ +++    +  R   +
Sbjct: 649 YWPKYLQGYCSVVQGFSKKFI--ASLGLLEELESHGTVPIAPVYGLLIDNFSKAGR-LEE 705

Query: 186 FVFVYKEMVKAGIVPNV---DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
            + ++KEM++     N+   D    L++ L   +++E A + +  + +KG  P    F  
Sbjct: 706 ALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVC 765

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           +IKGLI  ++ ++++ +   + D G+  +
Sbjct: 766 LIKGLIKVNKWNEALQLCYSICDEGVNWQ 794


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 154/710 (21%), Positives = 294/710 (41%), Gaps = 48/710 (6%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI++L +   +S A  +F W       +    TY  ++ K G  G+   +  +   M  +
Sbjct: 292 LIQILCDAGRVSDAKDVF-WKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKAD 350

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
            Y +   A  ++V +     RV+ A  V   M   G +     +N ++   ++  R    
Sbjct: 351 GYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADR-LNH 409

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            + ++  M   G  PN  T    +    ++     A+ ++  M  KG  P+      V+ 
Sbjct: 410 ALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLY 469

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
            L  + R+  +  +  E+  +G+  +   YT +I    + +  +EA+++F  M     +P
Sbjct: 470 SLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVP 529

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           D L    LI+ L +  R ++A  I  ++  + L PTD  +  ++ GL   GK  E ++ L
Sbjct: 530 DVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLL 589

Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN 420
           E+       P    +N +L+C C  G+   A  +L  M  +  + D  S+N  +  L + 
Sbjct: 590 EEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKE 649

Query: 421 EEIRKAYELLGRM---------VVSSVVP--------------------------DCATY 445
           + + +A+ +  +M          + +++P                          D +++
Sbjct: 650 DRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSF 709

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
            + + G  K    E ++     ++   ++LD    S L+  LC+ +K  EA E+      
Sbjct: 710 HSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFES 769

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G SL + S+N LI GL     +D A  L S     G      TY  I+  + K  R +D
Sbjct: 770 LGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIED 829

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           +L V  +M  +G       Y  +I  + +   L +    +  ++  G  P   T   LL 
Sbjct: 830 MLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLD 889

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL    ++       ++++      + ++YNIL+NG    G T +   L   M+ +G  P
Sbjct: 890 GLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINP 949

Query: 686 DATTHGLLVGS--SVGEEIDSRRFAFDSSSF---PDSVS-DILAEGLGNT 729
           D  ++ +L+G+  + G   DS  +    +     PD ++ ++L  GLG +
Sbjct: 950 DIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRS 999



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 146/627 (23%), Positives = 278/627 (44%), Gaps = 27/627 (4%)

Query: 65  HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA-GNVEEMEGLCQNMV 123
           H++R      D + AL++FK V+ Q R  HT ++ C  +L+L  A G V +M  +   M 
Sbjct: 83  HMLR--SAAADPAEALQLFKSVAQQPRIVHTTES-CNYMLELMRAHGRVRDMAQVFDLMQ 139

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           ++    + +A +    +      + G +R     L  M   G  L+   +N ++  +V  
Sbjct: 140 RQ----IVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLV-- 193

Query: 180 KRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K G+  + + VYK M   GIVP+V T + L+ + F    +E+ +   R M   G  PN  
Sbjct: 194 KSGYDREAMEVYKVMATDGIVPSVRTYSVLM-LAFGKRDVETVVWLLREMEDHGVKPNVY 252

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           ++ I I+ L    R +++  IL +M D G + ++   T +I +LC   ++ +A  +F  M
Sbjct: 253 SYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKM 312

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +A D  PD +TY  L++   +N       +I   M   G       +  +V  LC+VG+ 
Sbjct: 313 KASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRV 372

Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIP 413
           DE+ +  +        P    +N+L+     A +   A  +   M       +  ++ + 
Sbjct: 373 DEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLF 432

Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
           I +  ++ E  KA +    M    +VPD    +A +    K      A RVF ++ +  +
Sbjct: 433 INYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGV 492

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
             D+I+Y+ +++   +     EA++VF  M +  C     + N LI  L    + ++A +
Sbjct: 493 CPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWK 552

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
           +           T  TY  ++ GL +  + K+++ +L +M       ++  Y  ++  + 
Sbjct: 553 IFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLC 612

Query: 594 EQNKLKDC-ALFFNVMVKAGLVPDRETMLSLLHGLADGSQL----HLVSSGINKLVSDSE 648
           +  ++     + +N+ +K G +PD  +  + LHGL    +L     +       L  D  
Sbjct: 613 KNGEVNYALGMLYNMTMK-GCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYT 671

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLL 675
            L + + + + NGL  E L +   Y+L
Sbjct: 672 TLCTILPSFVKNGLMNEALHTLKEYIL 698



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 120/517 (23%), Positives = 228/517 (44%), Gaps = 13/517 (2%)

Query: 189  VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
            ++ E+ +  + P   T N LL  L    +++  +     M+     PN  T+  V+  L 
Sbjct: 553  IFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLC 612

Query: 249  ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
             N  V+ ++ +L  M   G   +LS Y   +  L +E++L EA R+F  M+ + L PD  
Sbjct: 613  KNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYT 671

Query: 309  TYEELINCLCENLRLDDANDILEDMIVIGLTPTD-DVFVDIVRGLCEVGKFDESVNFLED 367
            T   ++    +N  +++A   L++ I+   +  D   F  ++ G+ +    ++S+ F E+
Sbjct: 672  TLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAEN 731

Query: 368  KC-------GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
                      +  SP   L+   C + K   A  +++K     ++    S+N  I  L +
Sbjct: 732  IALSRILLDDFFLSP---LIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVD 788

Query: 420  NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
               I  A  L   M      PD  TY+  +    K    ED L+V +++  +      ++
Sbjct: 789  ENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVT 848

Query: 480  YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
            Y+ ++ GL + + + EA++++  +   G S +  ++  L+ GL    K++ A  L     
Sbjct: 849  YNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEML 908

Query: 540  SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
              G     + Y  ++ G       + +  +   M+ +G   D+++Y +LI ++    +L 
Sbjct: 909  DYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLN 968

Query: 600  DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
            D   +F  + + GL PD  T   L+HGL    +L    S  N +       +   YN LI
Sbjct: 969  DSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLI 1028

Query: 660  NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              L KEG  ++A  + + +L  GW P+  T+  L+G 
Sbjct: 1029 LYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGG 1065



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 132/632 (20%), Positives = 267/632 (42%), Gaps = 24/632 (3%)

Query: 4    KLSSLTISNKIIKWVNLTSCISSLSCANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSP 63
            +L S+ +    I +  +  C S  S A+   +   ++MI++    D           L+ 
Sbjct: 486  ELKSIGVCPDNITYTMMIKCCSKASNADEA-MKVFSEMIETRCVPDV----------LAV 534

Query: 64   DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
            + LI  L      + A KIF  +  +     T  TY  ++  LG  G V+E+  L + M 
Sbjct: 535  NSLIDTLYKAGRGNEAWKIFHELK-EMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMN 593

Query: 124  KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
               YP       +++     +  VN A+ +L NM   G    +  +N  L  +V+E R  
Sbjct: 594  SNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDR-L 652

Query: 184  ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEI 242
             +   ++ +M K  + P+  TL  +L    +   +  AL   +  + + G   +  +F  
Sbjct: 653  TEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHS 711

Query: 243  VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
            +++G++  + ++ S+     +    I L+  F + +I  LC+  K  EA  L K   +L 
Sbjct: 712  LMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLG 771

Query: 303  LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
            +     +Y  LI  L +   +D A  +  +M  +G  P +  +  I+  + +  + ++ +
Sbjct: 772  VSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDML 831

Query: 363  NFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPI-R 415
               ++      +  YVT  +N ++     +   + A  +  K+     +       P+  
Sbjct: 832  KVQKEMHCKGYESTYVT--YNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLD 889

Query: 416  WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             L ++ +I  A +L   M+     P+ A Y+  + G     N E    +F+ +  Q +  
Sbjct: 890  GLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINP 949

Query: 476  DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
            D  SY+ L+  LC   ++ +++  F  +++ G      ++N+LI+GL    ++++A+ L 
Sbjct: 950  DIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLF 1009

Query: 536  SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
            +    SG +    TY  ++L L K  +A +   +  ++L  G   +V  Y  LI   S  
Sbjct: 1010 NDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVS 1069

Query: 596  NKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
                +    +  M+  G  P+  T + L + L
Sbjct: 1070 GSTDNAFASYGQMIVGGCPPNSSTYMQLPNQL 1101



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 94/471 (19%), Positives = 180/471 (38%), Gaps = 41/471 (8%)

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
            +S   Q R +H    C        +++ + A+ RV D   +   M    ++  +  +  
Sbjct: 99  FKSVAQQPRIVHTTESC------NYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLT 152

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           I   L  E  L  A     MM+   ++ +  TY  LI  L ++    +A ++ + M   G
Sbjct: 153 IFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDG 212

Query: 338 LTPTDDVFVDIVRGLCEVGKFD-ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           + P+   +  +   +   GK D E+V +L                              L
Sbjct: 213 IVPSVRTYSVL---MLAFGKRDVETVVWL------------------------------L 239

Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M D  +  +  S+ I IR L +     +AY++L +M      PD  T +  +   C  
Sbjct: 240 REMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDA 299

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
               DA  VF ++ A     D ++Y  L++           +E++  M  +G + +  ++
Sbjct: 300 GRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAY 359

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             ++  LC + +VD+A  +       G      +Y  ++ G +K  R    L +   M +
Sbjct: 360 TAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNI 419

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            G   +   Y + I    +  +       + +M   G+VPD     ++L+ LA   +L +
Sbjct: 420 HGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGM 479

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
                ++L S     D+  Y ++I    K     +A  +   M+    VPD
Sbjct: 480 AKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPD 530



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 1/223 (0%)

Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
            +VL+S +Y+ L+  L +     EA+EV+  M+ +G   S  ++++L+      R V+  
Sbjct: 177 GIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFG-KRDVETV 235

Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
           + L       G      +YT  +  L +  R ++   +L +M  EGC  DV    +LIQ 
Sbjct: 236 VWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQI 295

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
           + +  ++ D    F  M  +   PDR T ++LL    D      V    N + +D    +
Sbjct: 296 LCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDN 355

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              Y  +++ L + G   +AS + D M  KG  P   ++  L+
Sbjct: 356 VVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLI 398


>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
 gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
          Length = 800

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 144/636 (22%), Positives = 258/636 (40%), Gaps = 57/636 (8%)

Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
           ++ VK R   + +   +LV S+V    ++ A+  L  +   GF   +  FN ++  ++  
Sbjct: 153 EDTVKHRSSFLIQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIAN 212

Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            +  A    +YK++   G+ PN  T + +++       +  A + F+ M   G  PN+  
Sbjct: 213 GKVDAALA-IYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYA 271

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +   I+GL AN R D    +L    +  I +++  Y  +I   C E K++ A  +   M 
Sbjct: 272 YTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDME 331

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
             +L+ D   Y ELI   C+   L  A  +  DM   G+     +   I++  CE G   
Sbjct: 332 KQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHS 391

Query: 360 ESV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           + V     F + +       +N +++  C   K   A  +L++M  +++  D   +   I
Sbjct: 392 QVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLI 451

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
              C   ++  A+ +   M    + PD  T++  +    +     +AL+++  + +Q L 
Sbjct: 452 NGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLK 511

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            ++I+++ ++EGLC   K+TEA   FC M       S  ++  +I G C  +  +KA  L
Sbjct: 512 PNAITHNVMIEGLCIGGKVTEAEAFFCNMEDK----SIDNYGAMITGYCEAKHTEKASEL 567

Query: 535 ------RSLAYSSGTSY-----------------------------TTSTYTKIMLGLVK 559
                 R L    G  Y                             +   Y K++    +
Sbjct: 568 FFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYR 627

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
               ++   V   +   G   D+  Y  +I     QN+L +    F  M   G+ PD  T
Sbjct: 628 AGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVT 687

Query: 620 MLSLLHG----------LADGSQLHLVSSGINKLVSDSEVL-DSSMYNILINGLWKEGLT 668
              LL G               +++L +S I K + ++E+  D   Y  LI+G  K    
Sbjct: 688 FTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRL 747

Query: 669 SQASYLLDLMLGKGWVPD-ATTHGLLVGSSVGEEID 703
             A  L D M+ +G  PD AT   LL G     ++D
Sbjct: 748 EDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDVD 783



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 188/457 (41%), Gaps = 31/457 (6%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++ +M   GI  N   ++ +L+   E       +++F+R        +  ++ IV+  L 
Sbjct: 361 LHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALC 420

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
              +VD +V++L EM    + +++  YT +I   C   KL +A R+F+ M    L PD +
Sbjct: 421 KLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVV 480

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF---L 365
           T+  L+         ++A  + E M    L P       ++ GLC  GK  E+  F   +
Sbjct: 481 TFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNM 540

Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
           EDK       + A++   C A     A  +  ++++R +  D       +  LCE  E  
Sbjct: 541 EDKS---IDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKD 597

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
           +A  LL  M+  ++ P    Y   +    +  +  +A  VF  +    L  D  +Y+ ++
Sbjct: 598 RALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMI 657

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
              C+  +++EA  +F  M   G      +F +L+ G           R+ S A++    
Sbjct: 658 NVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDG--------HLKRVHSEAFARKRK 709

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
                 + I                  +M       DV  Y  LI    + ++L+D    
Sbjct: 710 EVNLAASNIW----------------KEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGL 753

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           ++ M+  G+ PDR T  +LL G  +   + +V + +N
Sbjct: 754 YDEMMYRGVEPDRATCTALLSGCRNRGDVDMVLTKLN 790


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 210/452 (46%), Gaps = 35/452 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +LG++V+ K  +   + + K+M   GI  N+ TL+ L+       ++  +     ++
Sbjct: 13  FNKILGSLVKLKY-YLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKI 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  PN+ T+  ++KGL     V   +    ++     Q     Y  ++  LC+  + 
Sbjct: 72  LKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGET 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             AI+L +M+      P+ + Y  +I+ LC++  +++A D+  +M         ++F ++
Sbjct: 132 RCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM------DAREIFPNV 185

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           +                          +N L+   C AG+   A  +L +M  + I  D 
Sbjct: 186 I-------------------------TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDV 220

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            +++I I  LC+  E + A ++   MV   V P+  +Y+  + G CK    ++A+ + R+
Sbjct: 221 YTFSILIDALCK--EGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 278

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +++V D+++Y+ L++GLC+  +IT A+ +   M   G      ++  L+  LC  + 
Sbjct: 279 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 338

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +DKA  L       G   T  TYT ++ GL K  R K+   +   +LV+GC +DV  Y +
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
           +I  + ++    +     + M   G +P+  T
Sbjct: 399 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVT 430



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 189/411 (45%), Gaps = 9/411 (2%)

Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
           I L K M    +  + +T   LINC C   ++  +  +L  ++ +G  P    +  +++G
Sbjct: 30  ISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKG 89

Query: 352 LCEVGKFDESVNFLEDKC---GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-A 405
           LC  G+  + ++F  DK     + T+   +  LL   C  G+   A  +L  + DR    
Sbjct: 90  LCLKGEVKKLLHF-HDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRP 148

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           +   ++  I  LC+++ + +AY+L   M    + P+  TY+  +   C       A  + 
Sbjct: 149 NVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLL 208

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++  +++  D  ++S L++ LC+  K   A ++F  M + G + +  S+NI+I GLC  
Sbjct: 209 HEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 266

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           ++VD+A+ L            T TY  ++ GL K  R    L ++ +M   G   DV  Y
Sbjct: 267 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 326

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             L+ ++ +   L      F  M + G+ P   T  +L+ GL  G +L         L+ 
Sbjct: 327 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 386

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
               +D   Y ++I+GL KEG+  +A  +   M   G +P+A T  +++ S
Sbjct: 387 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 149/317 (47%), Gaps = 36/317 (11%)

Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
           +E +PNV     +L+ +F    ++ GA  +L  M        V  F++++ A+ +E +  
Sbjct: 179 REIFPNVI-TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNA 237

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                ++  MV+ G+ PNV + N ++  L +  R++ A++  R M  K   P++ T+  +
Sbjct: 238 KQ---IFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I GL  + R+  +++++ EM   G   ++  YT ++  LC+   L++A  LF  M+   +
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P   TY  LI+ LC+  RL +A ++ + ++V G       +  ++ GLC+ G FDE++ 
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL- 413

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEE 422
                                          I  KM D   I +  ++ I IR L E +E
Sbjct: 414 ------------------------------AIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 443

Query: 423 IRKAYELLGRMVVSSVV 439
             KA +LL  M+   ++
Sbjct: 444 NDKAEKLLHEMIAKGLL 460



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 197/467 (42%), Gaps = 34/467 (7%)

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           ++M  KG   N  T  I+I       ++  S S+LG++  LG       +T ++  LC +
Sbjct: 34  KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
            ++++ +     + A     ++++Y  L+N LC+      A  +L  +      P   ++
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153

Query: 346 VDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI- 404
             I+ GLC+    D+ VN   D                           +  +M  R+I 
Sbjct: 154 SAIIDGLCK----DKLVNEAYD---------------------------LYSEMDAREIF 182

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            +  ++N  I   C   ++  A+ LL  M++ ++ PD  T+S  +   CK    ++A ++
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK--EGKNAKQI 240

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  +    +  +  SY+ ++ GLC+ +++ EA+ +   M        + ++N LI GLC 
Sbjct: 241 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 300

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             ++  A+ L +  +  G      TYT ++  L K Q       +  +M   G    +  
Sbjct: 301 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 360

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  LI  + +  +LK+    F  ++  G   D  T   ++ GL          +  +K+ 
Sbjct: 361 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 420

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
            +  + ++  + I+I  L+++    +A  LL  M+ KG +     HG
Sbjct: 421 DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLGFRNFHG 467



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/279 (18%), Positives = 119/279 (42%), Gaps = 8/279 (2%)

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
           KL  Y   + + +Q+  + +  + ++ S L+   C + ++  +  +   + K G   ++ 
Sbjct: 22  KLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTI 81

Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
           ++  L+ GLC+  +V K +       +        +Y  ++ GL K    +  + +L  +
Sbjct: 82  TWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMI 141

Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
                  +V  Y  +I  + +   + +    ++ M    + P+  T  +L+       QL
Sbjct: 142 EDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQL 201

Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
               S +++++  +   D   ++ILI+ L KEG    A  +   M+  G  P+  ++ ++
Sbjct: 202 MGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIM 259

Query: 694 VGS-----SVGEEIDSRRFAFDSSSFPDSVS-DILAEGL 726
           +        V E ++  R     +  PD+V+ + L +GL
Sbjct: 260 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%)

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           + KI+  LVKL+    ++ +  QM V+G   ++    ILI       ++         ++
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
           K G  P+  T  +L+ GL    ++  +    +K+V+ +   +   Y  L+NGL K G T 
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
            A  LL ++  +   P+   +  ++
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAII 157


>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 756

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 142/654 (21%), Positives = 285/654 (43%), Gaps = 28/654 (4%)

Query: 50  YEAKIQSLRHNLSP--DH--LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILK 105
           +  ++Q+   +L P  DH  +  VL     L  AL+ F+W       +H  DT+ KMI  
Sbjct: 99  WTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKM 158

Query: 106 LGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLS 165
           LG    +     +  +M ++  P   +  + L+ S+     V  ++++   M   G + +
Sbjct: 159 LGEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERT 218

Query: 166 VDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQF 225
           +  +N +   I+   R      + + +MV  G+ P   T N +L   F + R+E+AL  F
Sbjct: 219 IKSYNTLFKVILRRGRYMMAKRY-FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 277

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
             M  +G  P++ T+  +I G     ++D++  +  EM     +  +  YT +I      
Sbjct: 278 DDMKTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSV 337

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD-V 344
           +++++ +R+F+ MR+  + P+  TY  L+  LC+  ++ +A +IL++M+   + P D+ +
Sbjct: 338 DRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSI 397

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLAKCILEKM 399
           F+ ++    + G    +   L+     +  P  A     L+E  C A  +  A  +L+ +
Sbjct: 398 FLKLLVSQSKAGDMAAATEVLK-AMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTL 456

Query: 400 ADRKI---------ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
            +++I          +  ++N  I +LC N +  KA E+L R ++   V D    +  + 
Sbjct: 457 IEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKA-EVLFRQLMKRGVQDQDALNNLIR 515

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G  K  N E +  + + +S + +  ++ +Y  L++      +  +A      M ++G   
Sbjct: 516 GHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP 575

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSS--GTSYTTSTYTKIMLGLVKLQRAKDLLV 568
            S+ F  +I  L    +V  A R+  +      G         KI+  L+     ++ L 
Sbjct: 576 DSALFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALG 635

Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
            +  +   G   D+++   L+  +SE+ K        +  ++  L  D  +   +L  L 
Sbjct: 636 RIDLLNQNGHTADLDS---LLSVLSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALL 692

Query: 629 DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
              +     S + K++      D    + LI  L +EG T QA  +L  M+ KG
Sbjct: 693 GAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQAD-VLSRMIKKG 745



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 126/588 (21%), Positives = 247/588 (42%), Gaps = 35/588 (5%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFR 226
           V+NV+ GA   +K   A   F + E  ++G++  + DT   ++++L E  ++  A     
Sbjct: 119 VYNVLHGA---KKLEHALQFFRWTE--RSGLIRHDRDTHMKMIKMLGEVQKLNHARCILL 173

Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
            M +KG   +   F ++I+       V +SV I  +M DLG++  +  Y  +  ++ R  
Sbjct: 174 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRG 233

Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           +   A R F  M +  + P   TY  ++     +LRL+ A    +DM   G++P    + 
Sbjct: 234 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYN 293

Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
            I+ G C   K DE+     +  G  + P    +  +++   +  +      I E+M   
Sbjct: 294 TIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSF 353

Query: 403 KI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP-DCATYSAFVLGKCKLCNYED 460
            I  +  +++  +  LC+  ++ +A  +L  M+   + P D + +   ++ + K  +   
Sbjct: 354 GIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA 413

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM--------SKNGCSLSS 512
           A  V + ++  ++  ++  Y  L+E  C+      A+++   +         ++   +  
Sbjct: 414 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 473

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           S++N +I  LC   +  KA  L       G          ++ G  K    +    +L  
Sbjct: 474 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPESSYEILKI 532

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M   G   +  AY +LI+S   + +  D     + MV+ G VPD     S++  L +  +
Sbjct: 533 MSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFEDGR 592

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNI--LINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
           +   S  +  ++  +  ++ +M  I  ++  L   G   +A   +DL+   G   D  + 
Sbjct: 593 VQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSL 652

Query: 691 GLLVGSSVGEEIDS---------RRFAFDSSSFPDSVSDILAEGLGNT 729
            L V S  G+ I +         R  + D SS+ D V D L  G G T
Sbjct: 653 -LSVLSEKGKTIAALKLLDFGLERDLSLDFSSY-DKVLDALL-GAGKT 697


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 184/417 (44%), Gaps = 11/417 (2%)

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           + ++  +MF L + L  + +  ++  LC   K   A+ L + M      P+ +TY  +I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 80

Query: 316 CLCENLRLDDANDILEDMIVI-GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYV 372
             C   R+  A DI+ +M    G+ P    +  ++ G C+VG+ DE+V   ++    G V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 373 TSP---HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYE 428
                 +NAL+   C+ GK   A    ++M +R +A    ++N+ +  L  +    +AYE
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           L+  M    + PD  TY+  + G CK  N + AL +F  +S + +    ++Y+ L+  L 
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  ++ E  ++F    + G       +N LI        +D+A  +         +    
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           TY  +M GL  L R  +   ++ +M   G   D+  Y  LI   S +  +KD     N M
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 380

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
           +  G  P   T  +L+ GL    Q     + + ++V +    D S Y  LI GL  E
Sbjct: 381 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 189/401 (47%), Gaps = 11/401 (2%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N +L  L    +   AL+  R+M +    PN+ T+  VI G  +  RV  ++ I+ EM
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 264 FDLG-IQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENL 321
            + G I      Y  +I   C+  +++EA+++F +M+   ++ P+ + Y  LI   C+  
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158

Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HN 377
           +LD A    + M+  G+  T   +  +V  L   G+  E+   +E+  G   +P    +N
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
            L+   C  G    A  I E M+ R + A   ++   I  L +  ++++  +L    V  
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
            + PD   Y+A +       N + A  +  ++  + +  D ++Y+ L+ GLC + ++ EA
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
            ++   M+K G      ++N LI G  +   V  A+R+R+   + G + T  TY  ++ G
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           L K  +  D   ++ +M+  G   D   Y  LI+ ++ +++
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 151/345 (43%), Gaps = 36/345 (10%)

Query: 146 RVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKAGIVPNVD 203
           RV+ A++V   M   G  K    ++N ++G   ++  G  D   +Y++ MV+ G+   V 
Sbjct: 123 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ--GKLDTALLYRDRMVERGVAMTVA 180

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T N L+  LF   R   A +    M  KG  P+  T+ I+I G      V  ++ I   M
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 240

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
              G++  +  YT +I  L ++ +++E  +LF       + PD + Y  LIN    +  +
Sbjct: 241 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 300

Query: 324 DDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECC 383
           D A +I+ +M    + P D  +  ++RGLC +G+ DE                       
Sbjct: 301 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE----------------------- 337

Query: 384 CNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
                   A+ ++++M  R I  D  ++N  I       +++ A  +   M+     P  
Sbjct: 338 --------ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 389

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            TY+A + G CK    +DA  + +++    +  D  +Y  L+EGL
Sbjct: 390 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 6/288 (2%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++NI +R LC   +  +A ELL +M      P+  TY+  + G C     + AL + R++
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 469 SAQS-LVLDSISYSKLVEGLCQVEKITEAVEVFCCM-SKNGCSLSSSSFNILIYGLCVMR 526
             +  +  +  +Y  ++ G C+V ++ EAV+VF  M +K      +  +N LI G C   
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
           K+D A+  R      G + T +TY  ++  L    R  +   ++ +M  +G A DV  Y 
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
           ILI    ++  +K     F  M + G+     T  SL++ L+   Q+       ++ V  
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
               D  +YN LIN     G   +A  ++  M  K   PD  T+  L+
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 4/278 (1%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREAL 134
           L +AL +++   +++    T  TY  ++  L + G   E   L + M  K   P+V    
Sbjct: 160 LDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 135 ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV 194
           I L+        V  A+ +  NM+  G + +V  +  ++ A+  +K    +   ++ E V
Sbjct: 219 I-LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL-SKKGQVQETDKLFDEAV 276

Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
           + GI P++   N L+     +  I+ A +    M KK   P+  T+  +++GL    RVD
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           ++  ++ EM   GIQ +L  Y  +I     +  +++A+R+   M      P  LTY  LI
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 396

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
             LC+N + DDA +++++M+  G+TP D  ++ ++ GL
Sbjct: 397 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 210/441 (47%), Gaps = 11/441 (2%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI+   N+ ++  A ++     ++K  +     Y  +I     A  +E  + +   M ++
Sbjct: 16  LIKGFFNSRNIDKATRVMGI--LEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRK 73

Query: 126 RY-PNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGF 183
            + P+V    I ++ +F    +++ A++V   +      K ++  + +++ A + E  G 
Sbjct: 74  GFSPDVVTHNI-MIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEG-GI 131

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            + + +  EM+  G+ P+  T N +   L +  +++ A +  R ++ +GC P+  T+ I+
Sbjct: 132 DEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNIL 191

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           ++ L+   + D+    + E+F  G +  +  Y+ +I  LCR+ K+EE++ L K+M+   L
Sbjct: 192 LRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGL 251

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD   Y+ LI   C   +LD A + L+ MI  G  P    +  I+  LC+ G  D +V 
Sbjct: 252 TPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVE 311

Query: 364 FL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
                 E  C    S +N +L    ++G  + A  ++ +M  + I  D  ++N  I  LC
Sbjct: 312 IFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLC 371

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
            +  + +A  LL  M+     P+  +Y   +LG CK    +DA+ V   +       +  
Sbjct: 372 RDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNET 431

Query: 479 SYSKLVEGLCQVEKITEAVEV 499
           +Y+ L+EG+      T+A+E+
Sbjct: 432 TYTLLIEGIGFSGSRTQAMEL 452



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/484 (21%), Positives = 195/484 (40%), Gaps = 40/484 (8%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           MV     P+V     L++  F +  I+ A      + K G  P+   +  VI G    +R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANR 59

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-MMRALDLMPDELTYE 311
           ++ + ++L  M   G   ++  +  +I   C + K++ A+++F+ +++  +  P  +TY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
            LI        +D+A  +L++M+  GL P    +  I RGLC+ GK D +  F+      
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 372 VTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
              P    +N LL    N GK                     W+   +W+ E        
Sbjct: 180 GCKPDVITYNILLRALLNQGK---------------------WDEGEKWMSE-------- 210

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
                +      P+  TYS  +   C+    E+++ + + +  + L  D+  Y  L+   
Sbjct: 211 -----IFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAF 265

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C+  K+  A+E   CM  +G      ++N ++  LC     D A+ +       G     
Sbjct: 266 CREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNV 325

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
           S+Y  ++  L         L +++QML +G   DV  Y  LI  +     + +       
Sbjct: 326 SSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLAD 385

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M+     P+  +  ++L GL    ++      +  ++ +    + + Y +LI G+   G 
Sbjct: 386 MLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGS 445

Query: 668 TSQA 671
            +QA
Sbjct: 446 RTQA 449



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/446 (21%), Positives = 185/446 (41%), Gaps = 21/446 (4%)

Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV--DIVRGLCEV 355
           M A D  PD +   +LI     +  +D A  +   M ++      DVF    ++ G C+ 
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRV---MGILEKHGKPDVFAYNAVISGFCKA 57

Query: 356 GKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD--- 408
            + + +   L+       SP    HN ++   C  GK  LA  + E++   K  +C    
Sbjct: 58  NRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL--KDNNCKPTL 115

Query: 409 -SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++ I I        I +A +LL  M+   + PD  TY+    G CK    + A    R 
Sbjct: 116 ITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRT 175

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++++    D I+Y+ L+  L    K  E  +    +   GC  +  +++ILI  LC   K
Sbjct: 176 LNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGK 235

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +++++ L  +    G +     Y  ++    +  +    +  L  M+ +G   D+  Y  
Sbjct: 236 IEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNT 295

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           ++ ++ +          F  + + G  P+  +  ++L  L      +     I++++S  
Sbjct: 296 IMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG 355

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-----GLLVGSSVGEEI 702
              D   YN LI+ L ++G+  +A  LL  ML   + P+  ++     GL     + + I
Sbjct: 356 IDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAI 415

Query: 703 DSRRFAFDSSSFPDSVS-DILAEGLG 727
           +      ++   P+  +  +L EG+G
Sbjct: 416 EVLAAMIENGCQPNETTYTLLIEGIG 441


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/522 (21%), Positives = 240/522 (45%), Gaps = 11/522 (2%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
           VL  M + G +     +N ++       R   +   ++++M   G++PN+   N  L  L
Sbjct: 322 VLRQMTTNGAQPDTVTYNCMIHGYATLGR-LKEAAKMFRKMKSRGLIPNIVICNSFLASL 380

Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
            +  R + A + F  M  KG  P+  ++  ++ G  +     D + +   M   GI  + 
Sbjct: 381 CKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADC 440

Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
             +  +I    +   +++A+ +F  M+   + PD +TY  +I+      RL DA +    
Sbjct: 441 RVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQ 500

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVG---KFDESVNFLEDKCGYVTSP----HNALLECCCN 385
           M+  G+ P   V+  I++G C  G   K  E V+ + +K   +  P     N+++   C 
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG--IPRPDIVFFNSVINSLCK 558

Query: 386 AGKFFLAKCILEKMAD-RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            G+   A  I + + D  +  D  ++   I   C   ++ KA+++L  M V  V  D  T
Sbjct: 559 DGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVT 618

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           YS  + G  K     D L +FR++  + +  ++++Y  ++ GL +  +   A + F  M 
Sbjct: 619 YSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI 678

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           ++G +++ S + I++ GLC     D+AI L     +    ++ +    ++  + K+QR +
Sbjct: 679 ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKE 738

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           +   + A +   G   +   Y ++I ++ +   ++D    F+ M K+G+VP    +  ++
Sbjct: 739 EAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
             L +  ++    + ++K+     +L++S  +++++   ++G
Sbjct: 799 RMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 200/513 (38%), Gaps = 43/513 (8%)

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG--CCPNSRTFEIVIKGLIA 249
            M + G VPNV + + +L+ L + +  + ALD F+ M K+G  C PN   +  VI G   
Sbjct: 218 RMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFK 277

Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
                 + S+  EM   G++ ++  Y  II  LC+   +++A  + + M      PD +T
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVT 337

Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
           Y  +I+      RL +A  +   M   GL P   +    +  LC+ G+  E+    +   
Sbjct: 338 YNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397

Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
                P    +  LL    + G F     +   M    IA DC  +NI I    +   + 
Sbjct: 398 AKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVD 457

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
            A  +   M    V PD  TYS  +    ++    DA+  F Q+ A+ +  ++  Y  ++
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSS-SSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           +G C    + +A E+   M   G        FN +I  LC   +V  A  +  L    G 
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGE 577

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+T ++ G   + +      +L  M V G   D+  Y  L+    +  ++ D   
Sbjct: 578 RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLT 637

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
            F  M + G+ P+  T                                   Y I++ GL+
Sbjct: 638 LFREMQRKGVKPNTVT-----------------------------------YGIMLAGLF 662

Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           + G T  A      M+  G     + +G+++G 
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 196/439 (44%), Gaps = 15/439 (3%)

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA- 326
           + L +  Y+ ++   CR  + +  + LF  +    L   ++T   L+ CLC   R ++A 
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSP----HNALL 380
           N +L  M  +G  P    +  I++GLC+      +++  +   K G   SP    +N ++
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272

Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
                 G+   A  +  +M  + +  D  ++N+ I  LC+   + KA  +L +M  +   
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  TY+  + G   L   ++A ++FR++ ++ L+ + +  +  +  LC+  +  EA E+
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
           F  M+  G      S+  L++G          I L +   S+G +     +  ++    K
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
                D +++  +M  +G + DV  Y  +I + S   +L D    FN MV  G+ P+   
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 620 MLSLLHGLADGSQL----HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
             S++ G      L     LVS  INK +   +++    +N +IN L K+G    A  + 
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV---FFNSVINSLCKDGRVMDAHDIF 569

Query: 676 DLMLGKGWVPDATTHGLLV 694
           DL+   G  PD  T   L+
Sbjct: 570 DLVTDIGERPDVITFTSLI 588



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/492 (21%), Positives = 193/492 (39%), Gaps = 35/492 (7%)

Query: 189 VYKEMVKAGIV--PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           +++ M K G    PNV   N ++   F+      A   F  M ++G  P+  T+ ++I  
Sbjct: 250 LFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           L     +D +  +L +M   G Q +   Y C+I       +L+EA ++F+ M++  L+P+
Sbjct: 310 LCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPN 369

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +     +  LC++ R  +A +I + M   G  P    +  ++ G    G F + +    
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG--- 426

Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
                                       +   M    I ADC  +NI I    +   +  
Sbjct: 427 ----------------------------LFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A  +   M    V PD  TYS  +    ++    DA+  F Q+ A+ +  ++  Y  +++
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSS-SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
           G C    + +A E+   M   G        FN +I  LC   +V  A  +  L    G  
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER 578

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               T+T ++ G   + +      +L  M V G   D+  Y  L+    +  ++ D    
Sbjct: 579 PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTL 638

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  M + G+ P+  T   +L GL    +        ++++     +  S+Y I++ GL +
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698

Query: 665 EGLTSQASYLLD 676
                +A  L  
Sbjct: 699 NNCADEAIILFQ 710



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 150/329 (45%), Gaps = 12/329 (3%)

Query: 376 HNALLECCCNAGK----FFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE-LL 430
           ++ L++CCC A +      L  CIL      KI    +  + ++ LC      +A   LL
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILR--TGLKIHQITASTL-LKCLCYANRTEEAVNVLL 216

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ--SLVLDSISYSKLVEGLC 488
            RM     VP+  +YS  + G C     + AL +F+ ++ +  +   + ++Y+ ++ G  
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTT 547
           +  +  +A  +F  M++ G      ++N++I  LC  R +DKA + LR +  ++G    T
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT-TNGAQPDT 335

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ G   L R K+   +  +M   G   ++      + S+ +  + K+ A  F+ 
Sbjct: 336 VTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS 395

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           M   G  PD  +  +LLHG A       +    N + S+    D  ++NILI+   K G+
Sbjct: 396 MTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGM 455

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGS 696
              A  +   M  +G  PD  T+  ++ +
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISA 484



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           +++ A ++L  M   G +  +  ++ +L    +  R   D + +++EM + G+ PN  T 
Sbjct: 596 KMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR-INDGLTLFREMQRKGVKPNTVTY 654

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
             +L  LF   R  +A  +F  M + G       + I++ GL  N+  D+++ +  ++  
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           + ++  ++    +I  + +  + EEA  LF  + A  L+P+E TY  +I  L ++  ++D
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVED 774

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
           AN++   M   G+ P   +   I+R L E G+  ++ N+L
Sbjct: 775 ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 4/267 (1%)

Query: 438 VVP-DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
           VVP    TYS  +   C+    +  L +F  +    L +  I+ S L++ LC   +  EA
Sbjct: 152 VVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEA 211

Query: 497 VEVFCC-MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS--TYTKI 553
           V V    MS+ GC  +  S++I++ GLC      +A+ L  +    G + + +   Y  +
Sbjct: 212 VNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTV 271

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + G  K         +  +M  +G   DV  Y ++I ++ +   +    L    M   G 
Sbjct: 272 IHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGA 331

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            PD  T   ++HG A   +L   +    K+ S   + +  + N  +  L K G + +A+ 
Sbjct: 332 QPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAE 391

Query: 674 LLDLMLGKGWVPDATTHGLLVGSSVGE 700
           + D M  KG  PD  ++  L+     E
Sbjct: 392 IFDSMTAKGHKPDIVSYCTLLHGYASE 418



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 1/133 (0%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
           K S+ + N ++ A+ + +R   +   ++  +  +G++PN  T   ++  L +   +E A 
Sbjct: 718 KFSITILNTMINAMYKVQRK-EEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDAN 776

Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
           + F  M K G  P SR    +I+ L+    +  + + L ++    I LE S  + ++ + 
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLF 836

Query: 283 CRENKLEEAIRLF 295
            R+ K  E ++L 
Sbjct: 837 SRKGKYHEDMKLL 849


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 211/464 (45%), Gaps = 13/464 (2%)

Query: 238 RTFEIVIKGLIANSRVDDSVSILGEM-FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
           + F ++ K        + +V +   M ++   +  +  +  ++ ++ +E     A+  + 
Sbjct: 96  KCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYN 155

Query: 297 MM---RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
            +   + +++ P+ LT+  +I  +C+   +DDA  +  DM V    P    +  ++ GLC
Sbjct: 156 HVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLC 215

Query: 354 EVGKFDESVNFLE----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD- 408
           +  + DE+V+ L+    D C       N L+   C  G       +++ M  +  A  + 
Sbjct: 216 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEV 275

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC   ++ KA  LL RMV S  VP+  TY   + G  K     D  RV   +
Sbjct: 276 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALM 335

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             +   ++   YS L+ GL +  K  EA+++F  M+   C L++  ++ +I GLC   K 
Sbjct: 336 EERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP 395

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D+A+ + S   ++       TY+ +M G  +       + +   M       +   Y +L
Sbjct: 396 DEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVL 455

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV---S 645
           I  + +  K+K+  + +  M+  G  PD     S+++GL++   +       N+++    
Sbjct: 456 IHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEP 515

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           DS+  D   YNIL+N L K+   S+A  LL+ ML +G  PD  T
Sbjct: 516 DSQP-DVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 136/569 (23%), Positives = 254/569 (44%), Gaps = 24/569 (4%)

Query: 42  IKSHQTTDYEAKIQSLRHNLSP-DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYC 100
           I S +T + E +   L  N S  +H I      +D   + KIFK       ++    T+ 
Sbjct: 10  IPSTKTIETEPQSHPLHRNASDREHGIE-----HDPPISDKIFKSGPKMGSYKLGDSTFY 64

Query: 101 KMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN-S 159
            +I      G+ + +E +   M  E+   V +  + +  ++   +    A+ +   M   
Sbjct: 65  SLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYE 124

Query: 160 GGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA---GIVPNVDTLNYLLEVLFETN 216
              K +V  FN VL  I++E   +    F Y  ++ A    I PNV T N +++ + +  
Sbjct: 125 FECKRTVKSFNSVLNVIIQEGLFYRALEF-YNHVIGAKGVNISPNVLTFNLVIKTMCKVG 183

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            ++ A+  FR M    C P+  T+  ++ GL    R+D++VS+L EM   G       + 
Sbjct: 184 LVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFN 243

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            +I  LC++  L    +L   M      P+E+TY  LI+ LC   +L+ A  +L+ M+  
Sbjct: 244 VLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSS 303

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLA 392
              P    +  I+ GL + G+  +    L   ++ GY  + +  +AL+      GK   A
Sbjct: 304 KCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEA 363

Query: 393 KCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             + ++M    + +C+     ++  I  LC + +  +A E+L  M  +   P+  TYS+ 
Sbjct: 364 MQLFKEMT---VKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSL 420

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
           + G  +  N   A+ +++ ++  +   + + YS L+ GLC+  K+ EA+ V+  M   GC
Sbjct: 421 MKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGC 480

Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRS--LAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
                ++  +I GL     V+ A++L +  L     +     TY  ++  L K       
Sbjct: 481 KPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRA 540

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
           + +L  ML  GC  D+    I ++++ E+
Sbjct: 541 IDLLNSMLDRGCDPDLVTCIIFLRTLREK 569



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 157/379 (41%), Gaps = 41/379 (10%)

Query: 355 VGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SW 410
           VG FD      E +C       N++L      G F+ A      +   K  +      ++
Sbjct: 115 VGLFDRMA--YEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTF 172

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           N+ I+ +C+   +  A ++   M VS   PD  TY   + G CK    ++A+ +  ++  
Sbjct: 173 NLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 232

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                  ++++ L+ GLC+   +    ++   M   GC+ +  ++N LI+GLC+  K++K
Sbjct: 233 DGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEK 292

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           AI L     SS       TY  I+ GLVK  RA D   VLA M   G  ++   Y  LI 
Sbjct: 293 AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALIS 352

Query: 591 SMSEQNKLKDCALFF----------NVMVKAGLV-------------------------P 615
            + ++ K ++    F          N +V + ++                         P
Sbjct: 353 GLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKP 412

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  SL+ G  +    H        +   +   +   Y++LI+GL K+G   +A  + 
Sbjct: 413 NAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVW 472

Query: 676 DLMLGKGWVPDATTHGLLV 694
             MLGKG  PD   +G ++
Sbjct: 473 AQMLGKGCKPDVVAYGSMI 491



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 2/160 (1%)

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T+  ++  + K+    D + +   M V  C  DV  YC L+  + + +++ +     + M
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G  P   T   L++GL     L  V+  ++ +       +   YN LI+GL  +G  
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSV--GEEIDSRR 706
            +A  LLD M+    VP+  T+G ++   V  G  +D  R
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGAR 330



 Score = 43.1 bits (100), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 100/271 (36%), Gaps = 40/271 (14%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           T  Y A I  L  +  PD  + VL    +               R +  A TY  ++   
Sbjct: 379 TIVYSAVIDGLCRDGKPDEALEVLSEMTN--------------NRCKPNAYTYSSLMKGF 424

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
             AGN  +   + ++M K  +         L+       +V  AM V   M   G K  V
Sbjct: 425 FEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDV 484

Query: 167 DVFNVVLGAIVEEKRGFA-DFVFVYKEMV--KAGIVPNVDTLNYLLEVLFETNRIESALD 223
             +  ++  +     G   D + +Y EM+  +    P+V T N LL  L + + I  A+D
Sbjct: 485 VAYGSMINGL--SNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAID 542

Query: 224 QFRRMHKKGCCPNSRTFEIVIKG---------------------LIANSRVDDSVSILGE 262
               M  +GC P+  T  I ++                      L+   RV  +  I+  
Sbjct: 543 LLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEV 602

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
           M    +  + S +T ++  LC   K++ AI+
Sbjct: 603 MLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633


>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
 gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
          Length = 321

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 5/296 (1%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KGC P   TF I++ GL   +R+ D+  ++  M + G       +  I+  LC+E +
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             EA    + MR++ + P  +TY  LI+  C+  +L  A +IL++M   G  P    +  
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
            + GLC+ GK D+++       E K       +  L++  C AGK   A  +L++M +  
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            +     +N  + WLC+   I +A++L  RM  S ++PD  T+   V G C+    +DAL
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            + +Q+ +  L    + Y+ L++ L +  +++EA  +   M   G S +S ++ ++
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 30/330 (9%)

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +P  +T+  L++ LC+  RL DA +++E M   G  P   VF  I+  LC+ G+  E+  
Sbjct: 7   IPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
           F+E       SP                                 ++N+ I   C+ E++
Sbjct: 67  FIETMRSMGVSPTIV------------------------------TYNLLIDGFCKEEKL 96

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A E+L  M      P+  TY+ F+ G CK    +DAL +FR ++ + + LD   Y+ L
Sbjct: 97  HRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTL 156

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++GLCQ  K+ EA  +   M  +GC      +N ++  LC   ++++A +L      SG 
Sbjct: 157 IDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGI 216

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+  ++ G  +  R  D L++L QM   G A     Y  LI +++   ++ +   
Sbjct: 217 LPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYR 276

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
               M+  GL P+  T   +     D S L
Sbjct: 277 LLQEMISRGLSPNSRTYALMRKQQTDDSNL 306



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 5/264 (1%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R+  A  ++  M   G   +  VFN ++ A+ +E R    + F+ + M   G+ P + T 
Sbjct: 25  RLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFI-ETMRSMGVSPTIVTY 83

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L++   +  ++  AL+  + M  +G  PN  T+   + GL    +VDD++++   M +
Sbjct: 84  NLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTE 143

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             I+L++  YT +I  LC+  KL EA  L   M     +P    Y  +++ LC+  R+++
Sbjct: 144 KKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINE 203

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
           A+ + + M   G+ P    F  +V G C   + D+++  L+       +P    +N L++
Sbjct: 204 AHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLID 263

Query: 382 CCCNAGKFFLAKCILEKMADRKIA 405
               AG+   A  +L++M  R ++
Sbjct: 264 ALNRAGRVSEAYRLLQEMISRGLS 287



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 35/296 (11%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M     +P   T+   V G CK     DA  +   +  +    +++ ++ +++ LC+  +
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
             EA      M   G S +  ++N+LI G C   K+ +A+ +       G      TY  
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            + GL K  +  D L +   M  +   LDV  Y  LI  + +  KL +     + M  +G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 613 LVPDRETMLSLLHGLADGSQLH--------LVSSGI----------------NKLVSDSE 648
            VP      ++L  L  GS+++        +  SGI                   + D+ 
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 649 VLDSSM-----------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           +L   M           YN LI+ L + G  S+A  LL  M+ +G  P++ T+ L+
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 14/258 (5%)

Query: 92  FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVN 148
           F    D  CK        G   E  G  + M   R   V   +++   L+  F    +++
Sbjct: 48  FNGIMDALCK-------EGRSAEAYGFIETM---RSMGVSPTIVTYNLLIDGFCKEEKLH 97

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            A+ +L  M   G + +   +N  L  + +  +   D + +++ M +  I  +V     L
Sbjct: 98  RALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK-VDDALALFRAMTEKKIRLDVYGYTTL 156

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L +  ++  A      M   GC P    +  ++  L   SR++++  +   M   GI
Sbjct: 157 IDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGI 216

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             +   +  ++   CR +++++A+ L + M++  L P E+ Y  LI+ L    R+ +A  
Sbjct: 217 LPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYR 276

Query: 329 ILEDMIVIGLTPTDDVFV 346
           +L++MI  GL+P    + 
Sbjct: 277 LLQEMISRGLSPNSRTYA 294



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 18/202 (8%)

Query: 63  PDHL-----IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           P+H+     +  L     +  AL +F+ ++ +K+ +     Y  +I  L  AG + E   
Sbjct: 113 PNHVTYNTFLHGLCKYGKVDDALALFRAMT-EKKIRLDVYGYTTLIDGLCQAGKLAEAYS 171

Query: 118 LCQNMVKE---RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           L   M        P    A++S +       R+N A ++   M   G       F +++ 
Sbjct: 172 LLDEMENSGCVPKPGCYNAILSWL---CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVF 228

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
                 R   D + + ++M  AG+ P     N L++ L    R+  A    + M  +G  
Sbjct: 229 GYCRGHR-IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLS 287

Query: 235 PNSRTFEIVIKGLIANSRVDDS 256
           PNSRT+ ++ K      + DDS
Sbjct: 288 PNSRTYALMRK-----QQTDDS 304


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 218/479 (45%), Gaps = 52/479 (10%)

Query: 38  ETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQ--KRFQHT 95
           ++D +   +T   +A  +  +  ++P H+ +++    D+  AL IF   + +    F+H 
Sbjct: 20  QSDSLNKRRTMGSKAMFKWAK-TVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHD 78

Query: 96  ADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLV 155
            +T+  MI KL  A      E L   M +E+     + L+S+  ++   ++   ++RV  
Sbjct: 79  LNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFH 138

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE- 214
            M     K +   +  VL  +VEE +  + F F Y++M K GI P V +LN L++   + 
Sbjct: 139 KMQDFHCKPTEKSYISVLAILVEENQLKSAFRF-YRDMRKMGIPPTVTSLNVLIKAFCKN 197

Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           +  ++ A+  FR M   GC P+S T+  +I GL     + ++  +L EM   G    +  
Sbjct: 198 SGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVT 257

Query: 275 YTCIIPMLCRENKLEEAIRLFKMM--------------------------RALDLM---- 304
           YT II  LC+ N ++EA+RL + M                          RA D++    
Sbjct: 258 YTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMI 317

Query: 305 -----PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                P+ ++Y  L+N LC   ++++A +I + M + G  P   ++  IV  LC+V +F 
Sbjct: 318 QKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQ 377

Query: 360 ESVNFLEDK--CGYVTS---------PHNALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
           E+ NFL++   CG   +          HN ++   C       A  +   +  R I+   
Sbjct: 378 EAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITV 437

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
           D++N  ++  C  +++ K   +L  MV++  +P    +S  V   C      DA+++ +
Sbjct: 438 DTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQ 496



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/393 (22%), Positives = 182/393 (46%), Gaps = 22/393 (5%)

Query: 159 SGGFKLSVDVFNVVLGAIVEEKR-GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
           + GFK  ++ F++++  ++   +   A+ +    +  K  +  ++     LL +     R
Sbjct: 72  ANGFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDI-----LLSICRAYGR 126

Query: 218 IESALDQFRRMHK---KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
           I   LD  R  HK     C P  +++  V+  L+  +++  +     +M  +GI   ++ 
Sbjct: 127 IHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTS 186

Query: 275 YTCIIPMLCREN-KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
              +I   C+ +  +++A+ LF+ M      PD  TY  LIN LC    + +A ++L++M
Sbjct: 187 LNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEM 246

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKF 389
              G +P+   +  I+ GLC++   DE++  LED       P    +++L++  C  G  
Sbjct: 247 ETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHS 306

Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
             A+ ILE M  +++  +  S++  +  LC   +I +A E+  RM +    PD   Y   
Sbjct: 307 SRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKI 366

Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS-------KLVEGLCQVEKITEAVEVFC 501
           V   C +  +++A     ++    +  + I++S       +++ GLC +     A +++ 
Sbjct: 367 VNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYL 426

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            +   G S++  +FN L+   C  + + K  R+
Sbjct: 427 SVLTRGISITVDTFNSLLKCFCNKKDLPKTSRI 459



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/404 (21%), Positives = 172/404 (42%), Gaps = 13/404 (3%)

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           TF ++I  LI+ ++   + ++L  M +  I +       I     R +K  ++IR+F  M
Sbjct: 81  TFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKM 140

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE-VGK 357
           +     P E +Y  ++  L E  +L  A     DM  +G+ PT      +++  C+  G 
Sbjct: 141 QDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGT 200

Query: 358 FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
            D++++       +   P    +  L+   C       AK +L++M  +  +    ++  
Sbjct: 201 MDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTS 260

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            I  LC+   + +A  LL  M   ++ P+  TYS+ + G CK  +   A  +   +  + 
Sbjct: 261 IIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKR 320

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           L  + ISYS L+ GLC   KI EA+E+F  M   G    +  +  ++  LC + +  +A 
Sbjct: 321 LRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAA 380

Query: 533 RLRSLAYSSGT-------SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
                    G        S    T+ +++ GL  +  +     +   +L  G ++ V+ +
Sbjct: 381 NFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTF 440

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
             L++    +  L   +   + MV  G +P  E   ++++   D
Sbjct: 441 NSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCD 484



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 7/232 (3%)

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED-ALRVFRQVSAQSLVL 475
           L E  +++ A+     M    + P   + +  +   CK     D A+ +FR +S      
Sbjct: 159 LVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEP 218

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           DS +Y  L+ GLC+   I EA E+   M   GCS S  ++  +I+GLC +  VD+A+RL 
Sbjct: 219 DSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLL 278

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKL---QRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
                        TY+ +M G  K     RA+D+L ++ Q  +     ++ +Y  L+  +
Sbjct: 279 EDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRP---NMISYSTLLNGL 335

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
             + K+ +    F+ M   G  PD      +++ L D S+    ++ ++++V
Sbjct: 336 CNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMV 387



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 127/303 (41%), Gaps = 24/303 (7%)

Query: 409 SWNIPIRWLCENE-EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
           S N+ I+  C+N   + KA  L   M      PD  TY   + G C+  +  +A  + ++
Sbjct: 186 SLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQE 245

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +      ++Y+ ++ GLCQ+  + EA+ +   M       +  +++ L+ G C    
Sbjct: 246 METKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGH 305

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
             +A  +  L           +Y+ ++ GL    +  + L +  +M ++G   D   Y  
Sbjct: 306 SSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGK 365

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDR-------ETMLSLLHGLAD------GSQLH 634
           ++  + + ++ ++ A F + MV  G+ P+R        T   ++HGL          QL+
Sbjct: 366 IVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLY 425

Query: 635 L--VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L  ++ GI+  V          +N L+     +    + S +LD M+  G +P       
Sbjct: 426 LSVLTRGISITV--------DTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWST 477

Query: 693 LVG 695
           +V 
Sbjct: 478 MVN 480


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 143/637 (22%), Positives = 269/637 (42%), Gaps = 43/637 (6%)

Query: 58  RHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME- 116
           ++ LS   ++ VL++  D + A   F  V+      HT +T   M+  L +   V +M  
Sbjct: 86  KNALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVV 145

Query: 117 --GLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR----VLVNMNSGGFKLSVDVFN 170
              L QN + +R  N    +   +F       + G +R        M   GF L+   +N
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLF-------IRGGLRQTPFAFGKMREAGFHLNAYSYN 198

Query: 171 VVLGAIVEEKRGFA-DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
            ++  +++   G   + + +Y+ MV  G+ P++ T + L+    +    E+       M 
Sbjct: 199 GLIHLLLQS--GLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEME 256

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
             G  PN  T+ I I+ L    R+D++  I+  M D G   ++  YT +I  LC   KL+
Sbjct: 257 SLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLD 316

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           +A+ LF  M+A    PD +TY  +++   +   L    +   +M   G  P    F  +V
Sbjct: 317 DAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILV 376

Query: 350 RGLCEVGKFDESVNFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKIA 405
             LC+ G  DE+ + L+   K G + + H  N L+       +   A  +   M    + 
Sbjct: 377 NALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVV 436

Query: 406 DCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
               ++ + I +  ++    KA E   +M +  + P+    +A +    ++    +A  +
Sbjct: 437 PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVI 496

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F ++ +  L  DS++Y+ +++   +  ++ EA+E+   MS+N C       N LI  L  
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             +VD+A ++         + T  TY  ++ GL K  + +  + + A M   GC  +   
Sbjct: 557 AGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTIT 616

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           +  ++  + + +++         M     +PD  T  +++HGL            I K V
Sbjct: 617 FNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLV-----------IEKRV 665

Query: 645 SDSEVLDSSMYNI----------LINGLWKEGLTSQA 671
           SD+  L   M  +          L+ G+ K GL   A
Sbjct: 666 SDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDA 702



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 216/504 (42%), Gaps = 43/504 (8%)

Query: 198  IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
            + P V T N L+  L +  +++ A++ F  M   GC PN+ TF  ++  L  N  VD ++
Sbjct: 575  LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLAL 634

Query: 258  SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCL 317
             +L +M  +    ++  +  II  L  E ++ +AI LF  M+ + L PD +T   L+  +
Sbjct: 635  KMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGV 693

Query: 318  CENLRLDDANDILEDMI-VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTSP 375
             +N  ++DA  I ED +  +G+      + D++ G+      ++++ F +   CG V   
Sbjct: 694  VKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKD 753

Query: 376  HNALL---ECCCNAGKFFLAKCILEKMADR--KIADCDSWNIPIRWLCENEEIRKAYELL 430
             + L+   +  C   +  +A+ +  +           +S+N  I           A+ L 
Sbjct: 754  GSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLF 813

Query: 431  GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
              M  +   PD  TY                          +L+LD+   S         
Sbjct: 814  TEMKNAGCAPDVFTY--------------------------NLLLDAHGKSG-------- 839

Query: 491  EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             KI E  E++  M  + C  ++ + NI+I  L     +DKA+ L     S   S T  TY
Sbjct: 840  -KINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTY 898

Query: 551  TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
              ++ GL+K  R ++   +  +M+  GC  +   Y ILI    +   +      F  MV+
Sbjct: 899  GPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVR 958

Query: 611  AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
             G+ PD ++  SL+  L +  ++        KL      LDS  YN++I+GL +     +
Sbjct: 959  EGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEE 1018

Query: 671  ASYLLDLMLGKGWVPDATTHGLLV 694
            A  L D M  +G  PD  T+  L+
Sbjct: 1019 ALTLYDEMQSRGINPDLFTYNSLI 1042



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 105/482 (21%), Positives = 184/482 (38%), Gaps = 36/482 (7%)

Query: 210 EVLFETNRIESALDQFRRMHKKGCCP----NSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           EV+   N I    D F   +     P     + T   +++ L  + RV D V +   M +
Sbjct: 93  EVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQN 152

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
             I+ +L+ Y  I   L     L +    F  MR      +  +Y  LI+ L ++    +
Sbjct: 153 QIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCRE 212

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A ++   M++ GL P+   F  +   +   GK  ++                        
Sbjct: 213 ALEMYRRMVLEGLKPSLKTFSAL---MVATGKRRDTET---------------------- 247

Query: 386 AGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
                  K +LE+M    +  +  ++ I IR L     I +A  ++ RM      PD  T
Sbjct: 248 ------VKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVT 301

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
           Y+  +   C     +DA+ +F ++ A S   D ++Y  +++       +    E +  M 
Sbjct: 302 YTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEME 361

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
            +G +    +F IL+  LC    +D+A  L  +    G      TY  ++ GL+++ R  
Sbjct: 362 ADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLD 421

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           D L +   M   G       Y + I    +  +       F  M   G+ P+     + L
Sbjct: 422 DALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASL 481

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           + LA+  +L       N+L S+    DS  YN+++    K G   +A  LL  M      
Sbjct: 482 YSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCE 541

Query: 685 PD 686
           PD
Sbjct: 542 PD 543



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 8/316 (2%)

Query: 137  LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVK 195
            L+  F+  +    A  +   M + G    V  +N++L A    K G  + +F +Y++M+ 
Sbjct: 796  LIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDA--HGKSGKINELFELYEQMIC 853

Query: 196  AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            +   PN  T N ++  L ++N ++ ALD F  +      P   T+  ++ GL+ + R+++
Sbjct: 854  SSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEE 913

Query: 256  SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
            +  +  EM D G +   + Y  +I    +   +  A  LFK M    + PD  +Y  L+ 
Sbjct: 914  AKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVG 973

Query: 316  CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            CLCE  R+DDA    E +   GL      +  ++ GL    + +E++   ++      +P
Sbjct: 974  CLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINP 1033

Query: 376  ----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
                +N+L+     AG    A  + E++    +  +  ++N  IR    +     AY + 
Sbjct: 1034 DLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVY 1093

Query: 431  GRMVVSSVVPDCATYS 446
             RM+V    P+  T++
Sbjct: 1094 KRMMVGGCSPNTGTFA 1109



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 129/265 (48%), Gaps = 3/265 (1%)

Query: 98   TYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
            TY  ++   G +G + E+  L + M+     PN     I ++ + V    ++ A+ +  +
Sbjct: 827  TYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNI-IIANLVKSNSLDKALDLFYD 885

Query: 157  MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
            + SG F  +   +  +L  +++  R   +   +++EMV  G  PN    N L+    +T 
Sbjct: 886  LVSGDFSPTPCTYGPLLDGLLKSGR-LEEAKELFEEMVDYGCRPNNAIYNILINGFGKTG 944

Query: 217  RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
             + +A + F+RM ++G  P+ +++  ++  L    RVDD++    ++   G+ L+   Y 
Sbjct: 945  DVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYN 1004

Query: 277  CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
             +I  L R +++EEA+ L+  M++  + PD  TY  LI  L     ++ A  + E++  I
Sbjct: 1005 LMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI 1064

Query: 337  GLTPTDDVFVDIVRGLCEVGKFDES 361
            GL P    +  ++RG    G  D +
Sbjct: 1065 GLEPNVFTYNALIRGYSMSGNSDSA 1089



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 104/230 (45%)

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F ++      L++ SY+ L+  L Q     EA+E++  M   G   S  +F+ L+     
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
            R  +    L     S G      TYT  +  L +  R  +   ++ +M  +GC  DV  
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVT 301

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y +LI ++    KL D    F  M  +   PDR T +++L   +D   L  V    +++ 
Sbjct: 302 YTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEME 361

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +D    D   + IL+N L K G   +A +LLD+M  +G +P+  T+  L+
Sbjct: 362 ADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 148/288 (51%), Gaps = 5/288 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N  I  LC+ E   +AY+LL  MV S  +PD  TY+  + G CK    +DALRVF Q+
Sbjct: 56  TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-CSLSSSSFNILIYGLCVMRK 527
            A+    D ++YS L++GLC+  ++ EA+++F  M K+G C  ++ ++N LI G C M K
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D+A+ L      +G+S    TYT +M G  KL R  D   +L QM  +G   +V  +  
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTS 235

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS-GINKLVSD 646
           L+  +  +N+L D       M +    P   T  ++L G    +QL       + ++   
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCP 295

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             V+    +NI+I GL K   +S+A  L++    +   PD   +  ++
Sbjct: 296 PNVVS---FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 340



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 34/355 (9%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           VP   T N L+  L +  R   A D    M   GC P+  T+  +I G   + + DD++ 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCL 317
           +  ++   G + ++  Y+C+I  LC+E +L+EAI LF +M+++   MP+ +TY  LI+  
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 318 CENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
           C   ++D+A ++LE M   G +P    +  ++ G C++ + D++ + L        +P+ 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 378 ALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
                                          ++   +  LC    +  A  +LG M   S
Sbjct: 231 V------------------------------TFTSLMDGLCRENRLSDAVHILGEMRRKS 260

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
             P   TY+  + G C++   E+A +    +       + +S++ ++ GLC+V + +EA+
Sbjct: 261 CSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 318

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYT 551
           E+     +  C+     +  +I  LC  +KVD+A R+ R +    G    + TY+
Sbjct: 319 ELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 162/347 (46%), Gaps = 36/347 (10%)

Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL 294
           P + T+  +I GL    R  ++  +L EM   G   ++  YT +I   C+  K ++A+R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLC 353
           F+ + A    PD +TY  LI+ LC+  RL +A D+   MI  G   P    +  ++ G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNI 412
            +GK DE++N                               +LE+MA+   + D  ++  
Sbjct: 172 RMGKMDEAMN-------------------------------LLERMAETGSSPDVVTYTT 200

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
            +   C+   +  AY+LL +M    + P+  T+++ + G C+     DA+ +  ++  +S
Sbjct: 201 LMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 260

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
                 +Y+ +++G C+V ++ EA +    + +  C  +  SFNI+I GLC + +  +A+
Sbjct: 261 CSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 318

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE-GC 578
            L   A     +     YT ++  L + ++  +   V  +ML E GC
Sbjct: 319 ELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGC 365



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 161/348 (46%), Gaps = 35/348 (10%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+       R + A  +L  M   G    +  +  ++    + K+   D + V++++V 
Sbjct: 59  SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS-DDALRVFEQLVA 117

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC-PNSRTFEIVIKGLIANSRVD 254
            G  P+V T + L++ L +  R++ A+D F RM K G C PN+ T+  +I G     ++D
Sbjct: 118 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 177

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +++++L  M + G   ++  YT ++   C+  +L++A  L   M    L P+ +T+  L+
Sbjct: 178 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLM 237

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
           + LC   RL DA  IL +M     +PT   +  I+ G C V + +E+  F+ ++   +  
Sbjct: 238 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE---MDC 294

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           P N +                             S+NI IR LC+     +A EL+    
Sbjct: 295 PPNVV-----------------------------SFNIMIRGLCKVNRSSEAMELVEEAR 325

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL-DSISYS 481
                PD   Y+  +   C+    ++A RV+R++  +   L +SI+YS
Sbjct: 326 RRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 5/258 (1%)

Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
           V  +++Y+ L+ GLC+ E+ +EA ++   M  +GC     ++  LI G C  +K D A+R
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG-CALDVEAYCILIQSM 592
           +     + G      TY+ ++ GL K  R K+ + +  +M+  G C  +   Y  LI   
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
               K+ +       M + G  PD  T  +L++G    ++L      +N++       + 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SVGEEIDSRRFAFD 710
             +  L++GL +E   S A ++L  M  K   P   T+  ++     V +  ++R+F  +
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 711 SSSFPDSVS--DILAEGL 726
               P +V   +I+  GL
Sbjct: 291 EMDCPPNVVSFNIMIRGL 308


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 131/558 (23%), Positives = 242/558 (43%), Gaps = 21/558 (3%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMV--KAGIVPNVDTLNYLLE 210
           VL +M +  FK +++  N V+    E   GF D       MV       P V   N LL 
Sbjct: 115 VLEDMKNRNFKPTLEALNSVICVYAE--YGFVDKAVKMFYMVCELYNCFPCVVANNSLLN 172

Query: 211 VLFETNRIESALDQFRRMHKKG------CCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            L +  +++ A + + +M ++G         ++ +  IV+KGL    +V++   ++ + +
Sbjct: 173 CLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRW 232

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G    + FY  II   C++  L+ A R+F+ ++    +P   TY  LI+  C+  +  
Sbjct: 233 GNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQ 292

Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALL 380
             + +L +M V+GL     VF  I+    + G  D++   +    E  C    + +N L+
Sbjct: 293 VVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILI 352

Query: 381 ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
              C+ G+   A+  LE+  +R  + +  S+   +   C+  +   A ++L ++  +   
Sbjct: 353 NFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK 412

Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           PD  +Y AF+ G       + AL V  ++  + +  D+  Y+ L+ GLC+  +   A  +
Sbjct: 413 PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLL 472

Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
              M        +  +  L+ G     ++DKA  L  +  S G       Y  ++ GL K
Sbjct: 473 LSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCK 532

Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
             +  D +  + +M +   A D   +  +I    +Q+ L      F  M+K    P+   
Sbjct: 533 CGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVA 592

Query: 620 MLSLLHG---LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             SL++G   +AD S+   V   +     +  V+    Y ILI G  K G   +A+   +
Sbjct: 593 YTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVV---TYTILIGGFSKTGKPEKAASFFE 649

Query: 677 LMLGKGWVPDATTHGLLV 694
           LML    +P+ TT   L+
Sbjct: 650 LMLMNNCLPNDTTFHYLI 667



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/567 (23%), Positives = 236/567 (41%), Gaps = 47/567 (8%)

Query: 161 GFKLSVDVFNVVLG-------AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF 213
           G  L VD +++V+          VEE R   D      +    G VPNV   N +++   
Sbjct: 198 GLDLVVDNYSIVIVVKGLCDVGKVEEGRKLID------DRWGNGCVPNVVFYNVIIDGYC 251

Query: 214 ETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
           +   ++ A   F  +  KG  P   T+  +I G     +      +L EM  +G+ + + 
Sbjct: 252 KKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVK 311

Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
            +  II    +   +++A  + +MM  +   PD  TY  LIN  C   R+ +A + LE  
Sbjct: 312 VFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERA 371

Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL------EDKCGYVTSPHNALLECCCNAG 387
               L P    +  ++   C+ G +  + + L       DK   V+  + A +      G
Sbjct: 372 KERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVS--YGAFIHGSVAGG 429

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           +  +A  + EKM ++ +  D   +N+ +  LC+      A  LL  M+  ++ PD   Y+
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYA 489

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             V G  +    + A  +F  V ++ +    + Y+ +++GLC+  K+T+AV     M   
Sbjct: 490 TLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIA 549

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRA 563
             +    + + +I G      +D A+++               YT ++ G  K   + RA
Sbjct: 550 NHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRA 609

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           + +   +    +E    +V  Y ILI   S+  K +  A FF +M+    +P+  T   L
Sbjct: 610 EKVFRAMQSFNLEP---NVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYL 666

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEVLDS-------------SMYNILINGLWKEGLTSQ 670
           ++GL + +   L+    N+    S +LD              + YN +I  L K G+   
Sbjct: 667 INGLTNITNTTLLIEK-NEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDT 725

Query: 671 ASYLLDLMLGKGWVPD-----ATTHGL 692
           A  L   ML KG++ D     A  HGL
Sbjct: 726 AQLLQTKMLRKGFLMDSVCFSALLHGL 752



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 124/607 (20%), Positives = 256/607 (42%), Gaps = 67/607 (11%)

Query: 75  DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREA 133
           DL  A ++F+ + + K F  T +TY  +I     AG  + ++ L   M V     NV+  
Sbjct: 255 DLKRATRVFEELKL-KGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVK-V 312

Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-----GAIVEEKRGFADFVF 188
             S++ +   +  V+ A  ++  M   G +  +  +N+++     G  ++E   F +   
Sbjct: 313 FNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERA- 371

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
             KE     ++PN  +   L+    +      A D   ++ + G  P+  ++   I G +
Sbjct: 372 --KERT---LLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSV 426

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
           A   +D ++ +  +M + G+  +   Y  ++  LC++ +   A  L   M  L+L PD  
Sbjct: 427 AGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAY 486

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
            Y  L++    N  LD A ++ E ++  G+ P    +  +++GLC+ GK  ++V+++   
Sbjct: 487 MYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKM 546

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYE 428
                                        K+A+    D  + +  I    +  ++  A +
Sbjct: 547 -----------------------------KIANHA-PDEYTHSTVIDGYVKQHDLDSALK 576

Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
           + G+M+     P+   Y++ + G CK+ +   A +VFR + + +L  + ++Y+ L+ G  
Sbjct: 577 MFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFS 636

Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
           +  K  +A   F  M  N C  + ++F+ LI GL                       T  
Sbjct: 637 KTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL-----------------------TNI 673

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T T +++   +      +L   A M+ EG +  +  Y  +I  + +   +    L    M
Sbjct: 674 TNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKM 733

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
           ++ G + D     +LLHGL    +     + I+  ++  +   +  Y++ ++    +G  
Sbjct: 734 LRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKP 793

Query: 669 SQASYLL 675
           S+ASY+L
Sbjct: 794 SEASYIL 800



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/510 (20%), Positives = 211/510 (41%), Gaps = 18/510 (3%)

Query: 213 FETNRIESALDQFRRMHKKGCCP-----NSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           F  +RI +        H     P     N+  +  ++K ++      +   +L +M +  
Sbjct: 64  FVIDRIHNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRN 123

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL-DLMPDELTYEELINCLCENLRLDDA 326
            +  L     +I +      +++A+++F M+  L +  P  +    L+NCL +N ++D A
Sbjct: 124 FKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVA 183

Query: 327 NDILEDMIVIGLTPTDDVFVD------IVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
            ++ + M+  G     D+ VD      +V+GLC+VGK +E    ++D+ G    P    +
Sbjct: 184 CELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFY 243

Query: 377 NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N +++  C  G    A  + E++  +  +   +++   I   C+  + +   +LL  M V
Sbjct: 244 NVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNV 303

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             +  +   +++ +  K K    + A  + R ++      D  +Y+ L+   C   +I E
Sbjct: 304 MGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKE 363

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A E      +     +  S+  L++  C       A  +      +G      +Y   + 
Sbjct: 364 AEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIH 423

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G V        L+V  +M+ +G   D + Y +L+  + ++ +     L  + M+   L P
Sbjct: 424 GSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQP 483

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D     +L+ G    ++L   +     ++S         YN++I GL K G  + A   +
Sbjct: 484 DAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYV 543

Query: 676 DLMLGKGWVPDATTHGLLVGSSVGE-EIDS 704
           + M      PD  TH  ++   V + ++DS
Sbjct: 544 NKMKIANHAPDEYTHSTVIDGYVKQHDLDS 573



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 6/260 (2%)

Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
           LV+D+ S   +V+GLC V K+ E  ++      NGC  +   +N++I G C    + +A 
Sbjct: 201 LVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRAT 260

Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           R+       G   T  TY  ++ G  K  + + +  +L +M V G  ++V+ +  +I + 
Sbjct: 261 RVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAK 320

Query: 593 SEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDS 652
            +   +   A    +M + G  PD  T   L++    G ++      + +    + + + 
Sbjct: 321 YKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNK 380

Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEID----SRRF 707
             Y  L++   K+G    AS +L  +   G  PD  ++G  + GS  G EID     R  
Sbjct: 381 FSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREK 440

Query: 708 AFDSSSFPDS-VSDILAEGL 726
             +   FPD+ + ++L  GL
Sbjct: 441 MMEKGVFPDAQIYNVLMSGL 460


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/516 (22%), Positives = 218/516 (42%), Gaps = 16/516 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           + + + G+ P+ ++ N +L  L     ++ A+  FR +  K  C    +  I++K L++ 
Sbjct: 217 RRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDKNVC----SHNILLKALLSA 268

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R+ D+     EM       ++  Y  ++   C   +LE A++L   M A  L  +   Y
Sbjct: 269 GRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVY 325

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--K 368
             +I  LC   ++ DA  +LEDM + G+     VF  ++ G C  G    +    E+  K
Sbjct: 326 TSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQK 385

Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
            G       H AL+   C AG+   A  +L++M D+ +  D  ++ + I   C+   + +
Sbjct: 386 RGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVE 445

Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
           A+ +   MV   V P+  TY+A   G CK  +   A  +  ++  + L L+  +Y+ L+ 
Sbjct: 446 AFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLIN 505

Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
           GLC+   + +A+ +   M   G      ++  LI  LC   + D+A  +       G   
Sbjct: 506 GLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKP 565

Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
           + +TY  +M G     R +    +L  ML +    +V  Y  L++       +K     +
Sbjct: 566 SIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIY 625

Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
             M    + P+  T   L+ G      +        +++     L +S Y+ LI  L K+
Sbjct: 626 KGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKK 685

Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
              S+A    D M  +G   +   +   +  S  E+
Sbjct: 686 KKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNED 721



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/479 (20%), Positives = 208/479 (43%), Gaps = 35/479 (7%)

Query: 140 SFVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           + V+ Y V G    A+++L  M + G + +  V+  V+ A++  K   +D + V ++M  
Sbjct: 292 TMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVI-ALLCNKGQVSDALRVLEDMTM 350

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+  +      ++        + +A   F  M K+G   +  T   +I GL     + +
Sbjct: 351 HGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKE 410

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +  +L EM D G+ +++  YT +I   C+   + EA R+   M    + P+ +TY  L +
Sbjct: 411 ADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSD 470

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
            LC+   +  AN++L +M   GL      +  ++ GLC+ G  ++++  + +        
Sbjct: 471 GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTE-------- 522

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
                               +E    R   D  ++   I  LC++ E  +A+ +L  M+ 
Sbjct: 523 --------------------MEAAGHR--TDVYTYTTLIDTLCKSGEFDRAHNMLQEMLD 560

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             + P  ATY+  + G C     E   ++   +  +++  + ++Y+ L++  C  + +  
Sbjct: 561 KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKS 620

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
             E++  M     + + +++NILI G C  R + +A+         G   T S+Y+ ++ 
Sbjct: 621 TTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIR 680

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
            L K ++  +  V   +M  EG   + + Y   +     ++ L+      + +V+A  V
Sbjct: 681 LLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEASHV 739



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 182/444 (40%), Gaps = 64/444 (14%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  M+    + G +E    L   M  +   +      S++    N  +V+ A+RVL +M
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDM 348

Query: 158 NSGGFKLSVDVFNVVLGA------------IVEE--KRGFA-DFVF-------------- 188
              G  L   VF  V+              + EE  KRG A D V               
Sbjct: 349 TMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGEL 408

Query: 189 -----VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
                V +EMV  G+  +V T   L++   +   +  A      M  +   PN  T+  +
Sbjct: 409 KEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTAL 468

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
             GL     V  +  +L EM + G++L +  Y  +I  LC+   LE+A+R+   M A   
Sbjct: 469 SDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGH 528

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
             D  TY  LI+ LC++   D A+++L++M+  G+ P+   +  ++ G C  G+ +    
Sbjct: 529 RTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKK 588

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
            LE                            +LEK     +    ++N  ++  C ++ +
Sbjct: 589 LLE---------------------------WMLEKNVRPNVV---TYNSLMKQYCIDKNM 618

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
           +   E+   M    V P+  TY+  + G CK  N ++AL   +++  + L L + SYS L
Sbjct: 619 KSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678

Query: 484 VEGLCQVEKITEAVEVFCCMSKNG 507
           +  L + +K +EA   F  M   G
Sbjct: 679 IRLLNKKKKFSEARVFFDKMRNEG 702



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/409 (21%), Positives = 171/409 (41%), Gaps = 22/409 (5%)

Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD--IVRG 351
           L + +R   L P      E  N +   L LD+A  +  ++      P  +V     +++ 
Sbjct: 215 LLRRLRQYGLSPSP----ESCNAVLSRLPLDEAIALFREL------PDKNVCSHNILLKA 264

Query: 352 LCEVGKFDESVNFLEDKCGYVTSP-----HNALLECCCNAGKFFLAKCILEKMADRKI-A 405
           L   G+  ++    ++    ++SP     +  ++   C  G+   A  +L++MA + + +
Sbjct: 265 LLSAGRLKDACQHFDE----MSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           +   +   I  LC   ++  A  +L  M +  V  D   ++  + G C   +   A R+F
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
            ++  + L  D ++++ L+ GLC+  ++ EA  V   M   G  +   ++ +LI G C  
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKR 440

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
             + +A R+ +       +    TYT +  GL K    +    +L +M  +G  L+V  Y
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTY 500

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI  + +   L+        M  AG   D  T  +L+  L    +     + + +++ 
Sbjct: 501 NSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLD 560

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                  + YN+L+NG    G       LL+ ML K   P+  T+  L+
Sbjct: 561 KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609



 Score = 38.9 bits (89), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 9/206 (4%)

Query: 94  HTAD--TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALIS---LVFSFVNHYRVN 148
           H  D  TY  +I  L  +G  +    + Q M+ +    ++ ++ +   L+  F    RV 
Sbjct: 528 HRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK---GIKPSIATYNVLMNGFCMSGRVE 584

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
           G  ++L  M     + +V  +N ++     +K        +YK M    + PN +T N L
Sbjct: 585 GGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDK-NMKSTTEIYKGMHSQEVAPNENTYNIL 643

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++   +   ++ AL   + M +KG    + ++  +I+ L    +  ++     +M + G+
Sbjct: 644 IKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGL 703

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRL 294
             E   Y+  + +   E+ LE  I L
Sbjct: 704 TAEPDVYSFYMDISFNEDNLESTITL 729


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 134/603 (22%), Positives = 269/603 (44%), Gaps = 70/603 (11%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M+  GI+P+V T + +L       ++  A   FR M++ G  PN  ++  +I  L  + R
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V ++ ++  +M   GI  ++   T ++  L +  K +EA  +F+ +  L+L P+ +TY  
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++  C+  +++ A  +L+ M    + P    F  I+ G  + G   ++V+ L +     
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCDS-WNIPIRWLCENEEIRKAY 427
             P    +  L++    AG+  +A    ++M  R++ + +  ++I +  L     + +A 
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L+  M    + PD   Y++ + G  K  N   AL + +++  +++  D ++Y+ L++GL
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 488 CQVE--------------------KITEAVEVFCCMSKNGCSLSSSSFNILIYGLC---- 523
            ++                     K  +A+++   M   G   ++ ++NILI GLC    
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 360

Query: 524 ------------VM-------------------RKVDKAIRLRSLAYSSGTSYTTSTYTK 552
                       VM                    K DK +++     +SG   + + Y  
Sbjct: 361 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 420

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++    +L   +   VVL +M+  G + D+  Y  LI+     + ++     ++ M   G
Sbjct: 421 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 480

Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE----VLDSSMYNILINGLWKEGLT 668
           + P+  T  +LL GL++   +  +     KLVS+      V +++ Y+IL++G  + G  
Sbjct: 481 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 540

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFD---SSSFPDSVS-DIL 722
            +   L   M+ KG+VP   T+ +L+   +  G+ I++R    D       P+S + DIL
Sbjct: 541 KKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 600

Query: 723 AEG 725
             G
Sbjct: 601 TCG 603



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 188/453 (41%), Gaps = 39/453 (8%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK+       G +E  E + Q M KE  P       S++  +     ++ A+ VL  
Sbjct: 123 DGYCKL-------GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLRE 175

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFET 215
           M       +  V+ +++      K G  D    + KEM    +  +    + LL  L   
Sbjct: 176 MVQRNVMPNTIVYAILIDGYF--KAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRV 233

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            R++ A      M+ KG  P+   +  +I G         ++SI+ EM +  I+ ++  Y
Sbjct: 234 GRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAY 293

Query: 276 TCIIPMLCR--------------------ENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
             +I  L R                    + K E+A+ +   M++  +MP+ +TY  LI 
Sbjct: 294 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIG 353

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG----Y 371
            LC+   ++ A   L++M+V+   PT      +V+      K D+ +   E         
Sbjct: 354 GLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLEL 413

Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
             + +N L+   C  G    AK +L++M  R I AD  ++N  IR  C    + KA +  
Sbjct: 414 SLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTY 473

Query: 431 GRMVVSSVVPDCATYSAFVLG----KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
            +M V  + P+  TY+  + G           E+  ++  +++ + LV ++ +Y  LV G
Sbjct: 474 SQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSG 533

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
             +V    + + +   M   G   +  ++N+LI
Sbjct: 534 YGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 566



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 192/439 (43%), Gaps = 30/439 (6%)

Query: 180 KRG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
           K+G  +  V V +EMV+  ++PN      L++  F+    + A D  + M  +    ++ 
Sbjct: 162 KKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNV 221

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
            F+I++  L    R+D++ S++ +M+  GI  ++  Y  +I    +E     A+ + + M
Sbjct: 222 IFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 281

Query: 299 RALDLMPDELTYEELINCL-----------CENL---------RLDDANDILEDMIVIGL 338
           +  ++  D + Y  LI  L           C  +         + +DA DIL +M   G+
Sbjct: 282 KEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGI 341

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKC--GYVTSP--HNALLECCCNAGKFFLAKC 394
            P    +  ++ GLC+ G  +++ + L++     +V +P  H  L++    + K      
Sbjct: 342 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 401

Query: 395 ILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
           I EK+    +      +N  I   C     RKA  +L  MV   +  D  TY+A + G C
Sbjct: 402 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 461

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV----EKITEAVEVFCCMSKNGCS 509
              + E AL+ + Q+    +  +  +Y+ L+ GL       E + E  ++   M++ G  
Sbjct: 462 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 521

Query: 510 LSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV 569
            ++++++IL+ G   +    K I L     + G   T  TY  ++    K  +  +   +
Sbjct: 522 PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEAREL 581

Query: 570 LAQMLVEGCALDVEAYCIL 588
           L  +L +G   +   Y IL
Sbjct: 582 LNDLLTKGRIPNSFTYDIL 600


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 157/717 (21%), Positives = 278/717 (38%), Gaps = 115/717 (16%)

Query: 45  HQTTDYEAKIQ---SLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTAD---- 97
           H    +E  +Q   S    L+ D    VLD   D+   LK F WVS   R Q++      
Sbjct: 39  HTHNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVS---RGQYSGPINGF 95

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRV---- 153
            Y  ++  L  +    EME + +NM  E     REA+  ++ ++ +   V  A+ +    
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 154 ---------------LVNM--NSGGFKLSVDVFNVVL---GA------------------ 175
                          L+NM    G  +++  +++ +L   GA                  
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLC 215

Query: 176 ---IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
               +EE R   +      +    G +PN+   N L++   +   +E A   F  +  KG
Sbjct: 216 KEGKLEEGRKLIE------DRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P   T+  +I G            +L EM   G+ + +  Y  II    +   + +A+
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 329

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
              + M      PD +TY  LI+  C + ++ +A+ +LE  +  GL P    +  ++   
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 389

Query: 353 CEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           C+ G +D + N+L +       P    + AL+     AG+  +A  I EKM +R +  D 
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
             +NI +  LC+  ++  A  LL  M+  SV+PD   Y+  V G  +  N ++A ++F  
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
              + +    + Y+ +++G C+   + +A+     M K   +    +++ +I G      
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +D A ++              TYT ++ G  +       L +  +M   G   +V  Y I
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSI 629

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI S  ++ KL D A FF  M+    VP+  T                            
Sbjct: 630 LIGSFCKEAKLIDAASFFEEMLMNKCVPNDVT---------------------------- 661

Query: 648 EVLDSSMYNILINGLWKEGLTS------------QASYL--LDLMLGKGWVPDATTH 690
                  +N L+NG  K G  +            Q+ +L     M+  GW P +  +
Sbjct: 662 -------FNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAY 711



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/588 (21%), Positives = 250/588 (42%), Gaps = 35/588 (5%)

Query: 97  DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
           D YCK        G++E   GL   +  + +    E   +++  F          R+L+ 
Sbjct: 247 DGYCK-------KGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLME 299

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           MNS G  ++V V+N ++ A  +        V   + M++ G  P++ T N L+       
Sbjct: 300 MNSRGLTVNVQVYNTIIDARYKHGH-IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDG 358

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
           ++  A     +   KG  PN  ++  +I         D + + L EM + G + +L  Y 
Sbjct: 359 KVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYG 418

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            ++  L    +++ A+ + + M    + PD   Y  L++ LC+  +L  A  +L +M+  
Sbjct: 419 ALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 478

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
            + P   V+  +V G    G  DE+    E       +P    +NA+++  C  G    A
Sbjct: 479 SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDA 538

Query: 393 KCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
              + +M  R +A D  +++  I    +  ++  A ++   MV     P+  TY++ + G
Sbjct: 539 MACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLING 598

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            C+  +   +L++FR++ A  LV + ++YS L+   C+  K+ +A   F  M  N C  +
Sbjct: 599 FCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPN 658

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             +FN L+ G    +   +AI  +   +                      +    L    
Sbjct: 659 DVTFNYLVNGFS--KNGTRAISEKGNEFQE-------------------NKQSMFLNFFG 697

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
           +M+ +G A    AY  ++  + +    +      N M   G +PD  + ++LLHG+    
Sbjct: 698 RMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEG 757

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
           +     + ++  +++ E+  +  Y+ +++    +G TS+AS +L  M 
Sbjct: 758 RSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQG-TSEASVILQTMF 804



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 56/281 (19%), Positives = 113/281 (40%), Gaps = 42/281 (14%)

Query: 459 EDALRVFRQVS--AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           E  L+ F  VS    S  ++  +YS L++ L +    +E   V   M     S +  + +
Sbjct: 74  ELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMS 133

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG-LVKLQRAKDLLVVLAQML- 574
           I+I        V+KA+ L      + T +        +L  LVKL R +    +  +ML 
Sbjct: 134 IVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLE 193

Query: 575 VEGCA---LDVEAYCILIQSMSEQNKLKDCA---------------LFFNVMVKA----- 611
           ++G     +D  + CI+++ + ++ KL++                 +F+N ++       
Sbjct: 194 IDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKG 253

Query: 612 ---------------GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
                          G +P  ET  ++++G         +   + ++ S    ++  +YN
Sbjct: 254 DMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYN 313

Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
            +I+  +K G   +A   ++ M+  G  PD  T+  L+  S
Sbjct: 314 TIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGS 354


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 207/496 (41%), Gaps = 30/496 (6%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PNV T N +++ L +   +  A   F RM + GC P+  TF  +I G      +D+   
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           ++ EM   G + ++  Y  +I   C+  ++E A   F  M+   +M + +T+   ++  C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA 378
           +   + +A  +   M V G+   +  +  ++ G C+ G+ D+++  L D+      P N 
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL-DEMVRQGVPLNV 363

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +                             ++ + +  LC+  ++ +A ++L  M  + V
Sbjct: 364 V-----------------------------TYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
             +   Y+  + G     N E AL +  ++  + L LD   Y  L++GLC V K+ EA  
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M ++G   +   +  ++       KV +AI +      SG      TY  ++ GL 
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K     + +    +M   G   +V+AY  L+  + +   L +    FN MV  G+  D+ 
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
              +LL G      LH   +   K++     LD   Y   I+G     +  +A  +   M
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 679 LGKGWVPDATTHGLLV 694
           +G G  PD   +  L+
Sbjct: 635 IGHGIAPDRAVYNCLI 650



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 208/461 (45%), Gaps = 12/461 (2%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V  FN+V+  + +E    A+   ++  M + G +P+V T N L++   +   ++     
Sbjct: 187 NVFTFNIVIDFLCKEGE-LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M + GC  +  T+  +I       R++ +      M   G+   +  ++  +   C+
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           E  + EA++LF  MR   +  +E TY  LI+  C+  RLDDA  +L++M+  G+      
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 345 FVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFF-----LAKCILE 397
           +  +V GLC+  K  E+ + L   +K G      N LL      G F       A  +L 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRA---NELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 398 KMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M ++ +  D   +   I+ LC   ++ +A  LL +M  S + P+   Y+  +    K  
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG 482

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              +A+ + +++       + I+Y  L++GLC+   I EA+  F  M   G   +  ++ 
Sbjct: 483 KVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYT 542

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            L+ GLC    +++A++L +     G S     YT ++ G +K     D   + A+M+  
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
           G  LD+  Y   I      N + +    F+ M+  G+ PDR
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDR 643



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 199/474 (41%), Gaps = 44/474 (9%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD+V  +  + +L +         I+  L R+       RLF+ + A    P+  T+  
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----K 368
           +I+ LC+   L +A  +   M  +G  P    F  ++ G  + G+ DE    +E+     
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C      +NAL+ C C  G+   A      M    + A+  +++  +   C+   +R+A 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L  +M V  +  +  TY+  + G CK    +DA+ +  ++  Q + L+ ++Y+ LV+GL
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 488 CQVEKITEAVEVFCCMSK-----------------------------------NGCSLSS 512
           C+  K+ EA +V   M K                                    G  L  
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           S +  LI GLC + K+D+A  L +    SG       YT +M    K  +  + + +L +
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           +L  G   +V  YC LI  + +   + +    FN M   GL P+ +   +L+ GL     
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L+      N++V     LD  +Y  L++G  K+G    A  L   M+  G   D
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 176/401 (43%), Gaps = 33/401 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           + V +F     V  AM++   M   G  L+   +  ++    +  R   D + +  EMV+
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR-LDDAIVLLDEMVR 356

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+  NV T   L++ L +  ++  A D  R M K G   N   +  +I G   N   + 
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L EM + G++L++S Y  +I  LC  +KL+EA  L   M    L P+ + Y  +++
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
              ++ ++ +A  +L+ ++  G  P    +  ++ GLC+ G  DE+++            
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH----------- 525

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                                 KM D  +  +  ++   +  LC+N  + +A +L   MV
Sbjct: 526 --------------------FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMV 565

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  D   Y+A + G  K  N  DA  +  ++    L LD   Y+  + G C +  + 
Sbjct: 566 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 625

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           EA EVF  M  +G +   + +N LI     +  +++AI L+
Sbjct: 626 EAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQ 666



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 112/232 (48%), Gaps = 1/232 (0%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+    N ++++ A  +L  M+  G + +  ++  ++ A  +  +   + + + ++++ 
Sbjct: 438 ALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK-VPEAIAMLQKILD 496

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G  PNV T   L++ L +   I+ A+  F +M   G  PN + +  ++ GL  N  +++
Sbjct: 497 SGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNE 556

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +V +  EM   G+ L+   YT ++    ++  L +A  L   M    L  D   Y   I+
Sbjct: 557 AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFIS 616

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
             C    + +A ++  +MI  G+ P   V+  ++    ++G  +E+++  ++
Sbjct: 617 GFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 114/512 (22%), Positives = 226/512 (44%), Gaps = 6/512 (1%)

Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
           ++++MV+   +P+V + + LL+ L       S +  FR +HK     +     IV+    
Sbjct: 59  LFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCC 118

Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDE 307
              R D   S+L   F  GI      +  ++  L  ENK+++A+ LF K++R     P+E
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNE 178

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
           + Y  ++N LC+      A D+L  M      P   ++  ++   C+ G  D + + L +
Sbjct: 179 VMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNE 238

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                  P    ++ L++  C   ++   + +  +M    I  +  ++N  I  LC+  +
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  A E++  M+   V PD  TY+  + G       + A  +F  +  +S+  + ISY+ 
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNI 358

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L+ G  + +KI EA++V   +S+ G   S  + N+L++GL  + +   A        S+G
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
                 T+  ++ G  K    ++ +    ++       +++ Y  +I  + +  KL    
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL 662
             F  +   GL PD  T  +++ G      L      + K+  +  + D+  YN+++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            +    S+    L+ + GK +  +A T  LL+
Sbjct: 539 LRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/539 (20%), Positives = 229/539 (42%), Gaps = 16/539 (2%)

Query: 70  LDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPN 129
            +N   L  A  +F+ +   K       ++ K++  L    +   +  L + + K R P 
Sbjct: 47  FENVKCLDDAFSLFRQMVRTKPLPSVV-SFSKLLKALVHMKHYSSVVSLFREIHKLRIP- 104

Query: 130 VREALISLVFSFVNH----YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           V E ++S+V   VN     +R +    VL      G   +  +FN +L  +  E +   D
Sbjct: 105 VHEFILSIV---VNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENK-VKD 160

Query: 186 FVFVYKEMVKAGIV-PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
            V ++K++V+  I  PN      ++  L +    + A D  R M +    PN+  + IVI
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVI 220

Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
                +  +D + S+L EM    I  ++  Y+ +I  LC+ ++ E    LF  M  L++ 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P+  T+  +I+ LC+  +++DA +I+  MI  G+ P    +  I+ G    G+ D +   
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340

Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
            +        P    +N L+       K   A  +  +++ + +     + N+ +  L E
Sbjct: 341 FDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
               + A      M+ +  +PD  T+   + G  K    E+A+  F ++  +    +   
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           Y+ +++GLC+  K+ +A   F  +   G      ++  +I G C    +D+A  +     
Sbjct: 461 YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
            +G      TY  I+ G ++  +  ++   L ++  +  + +     +L+  ++E   L
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSL 579



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/449 (20%), Positives = 167/449 (37%), Gaps = 74/449 (16%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD+ S+  +M        +  ++ ++  L         + LF+ +  L +   E     
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           ++N  C   R D    +L      G+     +F  ++RGL    K  ++V+         
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVH--------- 163

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS--WNIPIRWLCENEEIRKAYELL 430
                                 + +K+    I + +   +   +  LC+    +KA++LL
Sbjct: 164 ----------------------LFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLL 201

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             M   S  P+   YS  +   CK    + A  +  ++  +S+  D  +YS L++ LC++
Sbjct: 202 RLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKL 261

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            +      +F  M       +  +FN +I GLC   KV+ A  +       G      TY
Sbjct: 262 SQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITY 321

Query: 551 TKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
             I+ G     ++ RA++   +   M+ +    ++ +Y ILI   + Q K+ +       
Sbjct: 322 NMIIDGYGLRGQVDRARE---IFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCRE 378

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           + + GL P   T                                    N+L++GL++ G 
Sbjct: 379 ISQKGLKPSIVTC-----------------------------------NVLLHGLFELGR 403

Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           T  A    D ML  G +PD  TH  L+G 
Sbjct: 404 TKSAQNFFDEMLSAGHIPDLYTHCTLLGG 432


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 5/296 (1%)

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M +KGC P   TF I++ GL   +R+ D+  ++  M + G       +  I+  LC+E +
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
             EA    + MR++ + P  +TY  LI+  C+  +L  A +IL++M   G  P    +  
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 348 IVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
            + GLC+ GK D+++       E K       +  L++  C AGK   A  +L++M +  
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 404 -IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
            +     +N  + WLC+   I +A++L  RM  S ++PD  T+   V G C+    +DAL
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
            + +Q+ +  L    + Y+ L++ L +  +++EA  +   M   G S +S ++ ++
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 30/330 (9%)

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           +P  +T+  L++ LC+  RL DA +++E M   G  P   VF  I+  LC+ G+  E+  
Sbjct: 7   IPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
           ++E       SP                                 ++NI I   C+ E++
Sbjct: 67  YIETMRSMGVSPTIV------------------------------TYNILIDGFCKEEKL 96

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
            +A E+L  M      P+  TY+ F+ G CK    +DAL +FR ++ + + LD   Y+ L
Sbjct: 97  HRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTL 156

Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
           ++GLCQ  K+ EA  +   M  +GC      +N ++  LC   ++++A +L      SG 
Sbjct: 157 IDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGI 216

Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
                T+  ++ G  +  R  D L++L QM   G A     Y  LI +++   ++ +   
Sbjct: 217 LPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYR 276

Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
               M+  GL P+  T   +     D S L
Sbjct: 277 LLQEMISRGLSPNSRTYALMRKQQTDDSNL 306



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 121/242 (50%), Gaps = 5/242 (2%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
           VFN ++ A+ +E R    + ++ + M   G+ P + T N L++   +  ++  AL+  + 
Sbjct: 47  VFNGIMDALCKEGRSAEAYGYI-ETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQE 105

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M  +G  PN  T+   + GL    +VDD++++   M +  I+L++  YT +I  LC+  K
Sbjct: 106 MTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGK 165

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           L EA  L   M     +P    Y  +++ LC+  R+++A+ + + M   G+ P    F  
Sbjct: 166 LAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGM 225

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
           +V G C   + D+++  L+       +P    +N L++    AG+   A  +L++M  R 
Sbjct: 226 MVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG 285

Query: 404 IA 405
           ++
Sbjct: 286 LS 287



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 110/222 (49%), Gaps = 1/222 (0%)

Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
            M S G   ++  +N+++    +E++     + + +EM   G  PN  T N  L  L + 
Sbjct: 70  TMRSMGVSPTIVTYNILIDGFCKEEK-LHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +++ AL  FR M +K    +   +  +I GL    ++ ++ S+L EM + G   +   Y
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             I+  LC+ +++ EA +LFK M    ++PD LT+  ++   C   R+DDA  +L+ M  
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN 377
            GL P + ++  ++  L   G+  E+   L++      SP++
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNS 290



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 35/296 (11%)

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           M     +P   T+   V G CK     DA  +   ++ +    +++ ++ +++ LC+  +
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
             EA      M   G S +  ++NILI G C   K+ +A+ +       G      TY  
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
            + GL K  +  D L +   M  +   LDV  Y  LI  + +  KL +     + M  +G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 613 LVPDRETMLSLLHGLADGSQLH--------LVSSGI----------------NKLVSDSE 648
            VP      ++L  L  GS+++        +  SGI                   + D+ 
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 649 VLDSSM-----------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           +L   M           YN LI+ L + G  S+A  LL  M+ +G  P++ T+ L+
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 98/210 (46%), Gaps = 1/210 (0%)

Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
           L+  F    +++ A+ +L  M   G + +   +N  L  + +  +   D + +++ M + 
Sbjct: 86  LIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK-VDDALALFRAMTEK 144

Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
            I  +V     L++ L +  ++  A      M   GC P    +  ++  L   SR++++
Sbjct: 145 KIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEA 204

Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
             +   M   GI  +   +  ++   CR +++++A+ L + M++  L P E+ Y  LI+ 
Sbjct: 205 HKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDA 264

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFV 346
           L    R+ +A  +L++MI  GL+P    + 
Sbjct: 265 LNRAGRVSEAYRLLQEMISRGLSPNSRTYA 294



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 18/202 (8%)

Query: 63  PDHL-----IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEG 117
           P+H+     +  L     +  AL +F+ ++ +K+ +     Y  +I  L  AG + E   
Sbjct: 113 PNHVTYNTFLHGLCKYGKVDDALALFRAMT-EKKIRLDVYGYTTLIDGLCQAGKLAEAYS 171

Query: 118 LCQNMVKE---RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
           L   M        P    A++S +       R+N A ++   M   G       F +++ 
Sbjct: 172 LLDEMENSGCVPKPGCYNAILSWL---CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVF 228

Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
                 R   D + + ++M  AG+ P     N L++ L    R+  A    + M  +G  
Sbjct: 229 GYCRGHR-IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLS 287

Query: 235 PNSRTFEIVIKGLIANSRVDDS 256
           PNSRT+ ++ K      + DDS
Sbjct: 288 PNSRTYALMRK-----QQTDDS 304


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 12/409 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL---TYEELINCLCENLRLDDANDILE 331
           +T  +  LC+  K+E+A    + M+            T   +I  LC+  R+D A  +LE
Sbjct: 14  WTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLE 73

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS------PHNALLECCCN 385
            MI  G  P       ++  LC+  K  E+  FL+     +++       +N+LL   C 
Sbjct: 74  TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCK 133

Query: 386 AGKFFLAKCILEKMADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
           A K   A  I   M   +  + D  S++I I   C+ +E+ +A +L  +M+  + VP+  
Sbjct: 134 AKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVT 193

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           TY+AF+ G  +     DA  V+ ++ +     D I+YS L+ G     K  +A E+F  M
Sbjct: 194 TYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAM 253

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
              GC  ++ ++N L++GLC   K D+A  L       G      TYT ++ G   + + 
Sbjct: 254 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKI 313

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
           +  + V  +M+ +G   DV AY  L++      K  +    F VMV     PD  +   +
Sbjct: 314 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIM 373

Query: 624 LHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQA 671
           + GL+   +L        ++  D     D   YN LI GL  E   S+A
Sbjct: 374 IDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 185/398 (46%), Gaps = 9/398 (2%)

Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           T + +++ L +  R++SAL     M K+G CP+  T  ++I  L    ++ ++   L  M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 264 -FDLGIQLELSF-YTCIIPMLCRENKLEEAIRLFK-MMRALDLMPDELTYEELINCLCEN 320
              +  +    F Y  ++  LC+  K+ +A  +F  M+    ++PD ++Y  LI+  C+ 
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
             L  A  + + MI +   P    +   + GL   G+  ++    E+      SP    +
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           + L+     A K   A  + E M  R    +  ++N  +  LC+  +  +A+EL  +MV 
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
               PD  TY+  + G C +   E A+ VF ++ ++    D ++Y+ L++G  +  K  E
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIM 554
           A ++F  M    C   + S NI+I GL   +++D A+ +   +    G S    TY  ++
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
            GL   QR  + + V  ++     + D  A+ +L+++M
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 189/405 (46%), Gaps = 18/405 (4%)

Query: 333 MIVIGLTPTDDV-FVDIVRGLCEVGKFD---ESVNFLEDKCGYVTSPH----NALLECCC 384
           M V    P ++V +   + GLC+ GK +   E+   +++       P     +++++  C
Sbjct: 1   MAVESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC 60

Query: 385 NAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM--VVSSVVPD 441
            AG+   A  +LE M  R    D  + ++ I  LC+ ++I++A E L  M   +S+    
Sbjct: 61  KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           C +Y++ +   CK      A  +F   VS +S+V D +SYS L++G C+++++  A +++
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M    C  + +++N  + GL    ++  A  +     S+G S    TY+ ++ G    
Sbjct: 181 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLA 240

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           ++      +   M+  GC  +   Y  L+  + +++K  +    F  MV+ G  PD+ T 
Sbjct: 241 RKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY 300

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +LL+G  +  ++       +++VS     D   YN L+ G ++ G   +A  L  +M+ 
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS 360

Query: 681 KGWVPDATTHGLLV-GSSVGEEIDS-----RRFAFDSSSFPDSVS 719
           +   PD  +H +++ G S  + +D       R   D    PD V+
Sbjct: 361 RECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 405



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 178/394 (45%), Gaps = 8/394 (2%)

Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGG 161
           +I +L  AG V+    L + M+K  Y         L+       ++  A   L  MN   
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 162 FKLSVDVF--NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
              +   F  N +L ++ + K+    F      + +  +VP+V + + L++   + + + 
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
            A   +++M    C PN  T+   + GL+   R+ D+  +  EM   G   ++  Y+ +I
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLT 339
                  K ++A  LF+ M +    P+ +TY  L++ LC+  + D+A+++   M+  G  
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294

Query: 340 PTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCI 395
           P    +  ++ G C VGK +++V   ++       P    +N LL+    AGK   A+ +
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQL 354

Query: 396 LEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV-SSVVPDCATYSAFVLGKC 453
            + M  R+   D  S NI I  L + + +  A E+  RM       PD  TY++ + G C
Sbjct: 355 FQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 414

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
                 +A++VF+++    L  D  +++ L+E +
Sbjct: 415 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 193/434 (44%), Gaps = 24/434 (5%)

Query: 212 LFETNRIESALDQFRRMHKK---------GCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
           L ++ +IE A +  R M +          G C +      VI+ L    RVD ++S+L  
Sbjct: 21  LCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHS------VIQELCKAGRVDSALSLLET 74

Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-MMRALDLMPDE-LTYEELINCLCEN 320
           M   G   +++ ++ +I  LC+ +K++EA    + M R +        +Y  L+N LC+ 
Sbjct: 75  MIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKA 134

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDI-VRGLC---EVGKFDESVNFLED-KCGYVTSP 375
            ++  A  I   M+       D V   I + G C   E+G+ ++    + D  C    + 
Sbjct: 135 KKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTT 194

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           +NA L      G+   A+ + E+M     + D  +++  I       +  +A+EL   M+
Sbjct: 195 YNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMI 254

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
                P+  TY+  + G CK    ++A  +FR++  +    D ++Y+ L+ G C V KI 
Sbjct: 255 SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIE 314

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
           +AVEVF  M   G      ++N L+ G     K  +A +L  +  S      T ++  ++
Sbjct: 315 QAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMI 374

Query: 555 LGLVKLQRAKDLLVVLAQMLVE-GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
            GL K +R  D + V  +M  + GC+ D+  Y  LI  +  + +L +    F  + +  L
Sbjct: 375 DGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKL 434

Query: 614 VPDRETMLSLLHGL 627
            PD      LL  +
Sbjct: 435 SPDPHAFNVLLEAM 448



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 39/248 (15%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDT 204
           R+  A  V   M S G    V  ++ ++ G  +  K   A  +F  + M+  G  PN  T
Sbjct: 207 RIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF--EAMISRGCRPNAVT 264

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N LL  L + ++ + A + FR+M ++GC P+  T+  ++ G     +++ +V +  EM 
Sbjct: 265 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMV 324

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL---------------- 308
             G   ++  Y C++    R  K  EA +LF++M + +  PD +                
Sbjct: 325 SKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLD 384

Query: 309 --------------------TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
                               TY  LI  LC   RL +A  + +++  + L+P    F  +
Sbjct: 385 DAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL 444

Query: 349 VRGLCEVG 356
           +  +   G
Sbjct: 445 LEAMYAAG 452


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 212/478 (44%), Gaps = 38/478 (7%)

Query: 219 ESALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFD---LGIQLELSF 274
           E A+D F RM  +  C  + ++F  V+  +I       ++     +     + I   +  
Sbjct: 142 EKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLT 201

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  +I  +C+   +++AI++F+ M      PD  TY  L++ LC+  R+D+A  +L++M 
Sbjct: 202 FNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQ 261

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
           + G  P+   F  ++ GLC+ G    +   +++                      FL  C
Sbjct: 262 IDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDN---------------------MFLKGC 300

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           I  ++         ++N  I  LC   ++ KA  LL RMV S  VP+  TY   + G  K
Sbjct: 301 IPNEV---------TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVK 351

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
                D   V   +  +   ++   YS L+ GL +  K  EA+ +F  M+  G  L++  
Sbjct: 352 QGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIV 411

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           ++ +I GLC   K D A+ + S   + G +    T + +M G  +   +   + V   M 
Sbjct: 412 YSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMA 471

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
                 +   Y +LI  + +  K+K+  + +  M+  G  PD     S+++GL+    + 
Sbjct: 472 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVE 531

Query: 635 LVSSGINKLV---SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
                 N+++    DS+  D   YNIL+N L K+   S+A  LL+ ML +G  PD  T
Sbjct: 532 DAMQLYNEMLCQGPDSQP-DVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT 588



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 204/437 (46%), Gaps = 11/437 (2%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKA---GIVPNVDTLNYLLEVLFETNRIESALDQF 225
           FN VL  I++E   F   +  Y  ++ A    I PNV T N +++ + +   ++ A+  F
Sbjct: 164 FNSVLNVIIQEGL-FHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 226 RRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRE 285
           R M  + C P+  T+  ++ GL    R+D++VS+L EM   G       +  +I  LC++
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 286 NKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVF 345
             L  A +L   M     +P+E+TY  LI+ LC   +L+ A  +L+ M+     P    +
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 342

Query: 346 VDIVRGLCEVGKFDES--VNFLEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMAD 401
             I+ GL + G+  +   V  L ++ GY  + +  + L+      GK   A  + ++M  
Sbjct: 343 GTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV 402

Query: 402 RKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
           +    +   ++  I  LC + +   A E+L  M      P+  T S+ + G  +  N   
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHR 462

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A+ V++ ++  +   + + YS L+ GLC+  K+ EA+ V+  M   GC     +++ +I 
Sbjct: 463 AVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMIN 522

Query: 521 GLCVMRKVDKAIRLRS--LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           GL +   V+ A++L +  L     +     TY  ++  L K       + +L  ML  GC
Sbjct: 523 GLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGC 582

Query: 579 ALDVEAYCILIQSMSEQ 595
             D+    I ++ + E+
Sbjct: 583 DPDLVTCTIFLRMLREK 599



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 159/365 (43%), Gaps = 33/365 (9%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           R++ A+ +L  M   G   S   FNV++  + + K   +    +   M   G +PN  T 
Sbjct: 249 RIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCK-KGDLSRAAKLVDNMFLKGCIPNEVTY 307

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N L+  L    ++E A+    RM    C PN  T+  +I GL+   R  D   +L  M +
Sbjct: 308 NTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEE 367

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G  +    Y+ +I  L +E K +EA+ LFK M       + + Y  +I+ LC + + DD
Sbjct: 368 RGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDD 427

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A ++L +M   G TP       +++G  E G    +V   +D      + HN      C 
Sbjct: 428 AVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKD-----MAKHNFTQNEVC- 481

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
                                   +++ I  LC++ ++++A  +  +M+     PD   Y
Sbjct: 482 ------------------------YSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAY 517

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSL--VLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           S+ + G       EDA++++ ++  Q      D ++Y+ L+  LC+   I+ A+++   M
Sbjct: 518 SSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSM 577

Query: 504 SKNGC 508
              GC
Sbjct: 578 LDRGC 582



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 147/353 (41%), Gaps = 38/353 (10%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++N+ I+ +C+   +  A ++   M +    PD  TY   + G CK    ++A+ +  ++
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
                    ++++ L+ GLC+   ++ A ++   M   GC  +  ++N LI+GLC+  K+
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA----------------- 571
           +KAI L     SS       TY  I+ GLVK  RA D   VLA                 
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTL 380

Query: 572 ------------------QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
                             +M V+G  L+   Y  +I  +    K  D     + M   G 
Sbjct: 381 ISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGC 440

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P+  T  SL+ G  +    H        +   +   +   Y++LI+GL K+G   +A  
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 500

Query: 674 LLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS--SSFPDSVSDILA 723
           +   MLGKG  PD   +  ++ G S+   ++     ++      PDS  D++ 
Sbjct: 501 VWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVT 553



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 2/190 (1%)

Query: 507 GCSLSSS--SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAK 564
           G S+S +  +FN++I  +C +  VD AI++              TY  +M GL K  R  
Sbjct: 192 GVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRID 251

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
           + + +L +M ++GC      + +LI  + ++  L   A   + M   G +P+  T  +L+
Sbjct: 252 EAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLI 311

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           HGL    +L    S ++++VS   V +   Y  +INGL K+G     + +L LM  +G+ 
Sbjct: 312 HGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYC 371

Query: 685 PDATTHGLLV 694
            +   +  L+
Sbjct: 372 VNEYVYSTLI 381



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 11/188 (5%)

Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
           T+  ++  + K+    D + V   M +  C  DV  YC L+  + + +++ +     + M
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260

Query: 609 VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLT 668
              G  P   T   L++GL     L   +  ++ +     + +   YN LI+GL  +G  
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320

Query: 669 SQASYLLDLMLGKGWVPDATTHGLLV-----------GSSVGEEIDSRRFAFDSSSFPDS 717
            +A  LLD M+    VP+  T+G ++           G+ V   ++ R +  +   +   
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTL 380

Query: 718 VSDILAEG 725
           +S +  EG
Sbjct: 381 ISGLFKEG 388



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 101/276 (36%), Gaps = 50/276 (18%)

Query: 47  TTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL 106
           T  Y A I  L  +  PD  + VL    +       +   S+ K F              
Sbjct: 409 TIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFE------------ 456

Query: 107 GLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
             AGN      + ++M K  +         L+       +V  AM V   M   G K  V
Sbjct: 457 --AGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDV 514

Query: 167 DVFN-----VVLGAIVEEKRGFADFVFVYKEMVKAGI--VPNVDTLNYLLEVLFETNRIE 219
             ++     + +  +VE      D + +Y EM+  G    P+V T N LL  L + + I 
Sbjct: 515 VAYSSMINGLSIAGLVE------DAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSIS 568

Query: 220 SALDQFRRMHKKGCCP--------------------NSRTF--EIVIKGLIANSRVDDSV 257
            A+D    M  +GC P                    + R F  E+V++ L+   RV  + 
Sbjct: 569 RAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVR-LLKRQRVLGAS 627

Query: 258 SILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
            I+  M    +  + S +  ++  LC+  K++  I+
Sbjct: 628 KIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQ 663


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 207/496 (41%), Gaps = 30/496 (6%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
            PNV T N +++ L +   +  A   F RM + GC P+  TF  +I G      +D+   
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
           ++ EM   G + ++  Y  +I   C+  ++E A   F  M+   +M + +T+   ++  C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA 378
           +   + +A  +   M V G+   +  +  ++ G C+ G+ D+++  L D+      P N 
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL-DEMVRQGVPLNV 363

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
           +                             ++ + +  LC+  ++ +A ++L  M  + V
Sbjct: 364 V-----------------------------TYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
             +   Y+  + G     N E AL +  ++  + L LD   Y  L++GLC V K+ EA  
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
           +   M ++G   +   +  ++       KV +AI +      SG      TY  ++ GL 
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 559 KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           K     + +    +M   G   +V+AY  L+  + +   L +    FN MV  G+  D+ 
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
              +LL G      LH   +   K++     LD   Y   I+G     +  +A  +   M
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 679 LGKGWVPDATTHGLLV 694
           +G G  PD   +  L+
Sbjct: 635 IGHGIAPDRAVYNCLI 650



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 208/461 (45%), Gaps = 12/461 (2%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
           +V  FN+V+  + +E    A+   ++  M + G +P+V T N L++   +   ++     
Sbjct: 187 NVFTFNIVIDFLCKEGE-LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M + GC  +  T+  +I       R++ +      M   G+   +  ++  +   C+
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           E  + EA++LF  MR   +  +E TY  LI+  C+  RLDDA  +L++M+  G+      
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 345 FVDIVRGLCEVGKFDESVNFLE--DKCGYVTSPHNALLECCCNAGKFF-----LAKCILE 397
           +  +V GLC+  K  E+ + L   +K G      N LL      G F       A  +L 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRA---NELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 398 KMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
           +M ++ +  D   +   I+ LC   ++ +A  LL +M  S + P+   Y+  +    K  
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG 482

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
              +A+ + +++       + I+Y  L++GLC+   I EA+  F  M   G   +  ++ 
Sbjct: 483 KVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYT 542

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
            L+ GLC    +++A++L +     G S     YT ++ G +K     D   + A+M+  
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
           G  LD+  Y   I      N + +    F+ M+  G+ PDR
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDR 643



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 199/474 (41%), Gaps = 44/474 (9%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +DD+V  +  + +L +         I+  L R+       RLF+ + A    P+  T+  
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----K 368
           +I+ LC+   L +A  +   M  +G  P    F  ++ G  + G+ DE    +E+     
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
           C      +NAL+ C C  G+   A      M    + A+  +++  +   C+   +R+A 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +L  +M V  +  +  TY+  + G CK    +DA+ +  ++  Q + L+ ++Y+ LV+GL
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 488 CQVEKITEAVEVFCCMSK-----------------------------------NGCSLSS 512
           C+  K+ EA +V   M K                                    G  L  
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
           S +  LI GLC + K+D+A  L +    SG       YT +M    K  +  + + +L +
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           +L  G   +V  YC LI  + +   + +    FN M   GL P+ +   +L+ GL     
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
           L+      N++V     LD  +Y  L++G  K+G    A  L   M+  G   D
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 176/401 (43%), Gaps = 33/401 (8%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           + V +F     V  AM++   M   G  L+   +  ++    +  R   D + +  EMV+
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR-LDDAIVLLDEMVR 356

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
            G+  NV T   L++ L +  ++  A D  R M K G   N   +  +I G   N   + 
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L EM + G++L++S Y  +I  LC  +KL+EA  L   M    L P+ + Y  +++
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
              ++ ++ +A  +L+ ++  G  P    +  ++ GLC+ G  DE+++            
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH----------- 525

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
                                 KM D  +  +  ++   +  LC+N  + +A +L   MV
Sbjct: 526 --------------------FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMV 565

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
              +  D   Y+A + G  K  N  DA  +  ++    L LD   Y+  + G C +  + 
Sbjct: 566 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 625

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           EA EVF  M  +G +   + +N LI     +  +++AI L+
Sbjct: 626 EAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQ 666



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 123/260 (47%), Gaps = 3/260 (1%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +L+    N ++++ A  +L  M+  G + +  ++  ++ A  +  +   + + + ++++ 
Sbjct: 438 ALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK-VPEAIAMLQKILD 496

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
           +G  PNV T   L++ L +   I+ A+  F +M   G  PN + +  ++ GL  N  +++
Sbjct: 497 SGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNE 556

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           +V +  EM   G+ L+   YT ++    ++  L +A  L   M    L  D   Y   I+
Sbjct: 557 AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFIS 616

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
             C    + +A ++  +MI  G+ P   V+  ++    ++G  +E+++ L+D+   V  P
Sbjct: 617 GFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAIS-LQDEMERVL-P 674

Query: 376 HNALLECCCNAGKFFLAKCI 395
                +   +AG     KCI
Sbjct: 675 SCTDSDTATDAGSVCTTKCI 694


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/478 (23%), Positives = 209/478 (43%), Gaps = 8/478 (1%)

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L     +E        M  KG  P+      +I+      R  ++  I+G + + G  ++
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
            + Y  +I   C+  ++EEA+R+   +    + P+  TY+ ++  LC+  +L  A  +L+
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
             +     P       ++   C+     +++    +  G    P    +N L++  C  G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
           +   A   L+K+      +D  S N+ +R LC       A +LL  M+     P   T++
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             +   C+      AL V   +       +S S++ L++G C  + I  A+E    M   
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           GC     ++NIL+  LC   KVD A+ + S   S G S +  +Y  ++ GL+K+ +A+  
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
           + +L +M  +G   D+     ++  +S + K+ +   FF+ +   G+ P+     S++ G
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMG 495

Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           L    Q  L    +  +V++      + Y  LI G+  EGL  +AS L + +  +G V
Sbjct: 496 LCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 213/506 (42%), Gaps = 36/506 (7%)

Query: 110 GNVEEMEGLCQNMV-KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G +EE     + M  K + P+V  A  +L+  F    R   A R++  +   G  +  + 
Sbjct: 83  GELEEGSRFLEYMTNKGKIPDVV-ACTALIREFCKIGRTKNATRIMGILEESGAVIDANS 141

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +NV++ A  +      +     + +    + PN  T + +L  L +  +++ A+    R 
Sbjct: 142 YNVLINAYCKS----GEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            +  C P+  T  ++I      S V  ++ +  EM   G + ++  Y  +I   C+E +L
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +EAI   K + +     D +++  ++  LC   R  DA  +L  M+  G  P+   F  +
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           +  LC+ G   +++N LE    +  +P++                               
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNS------------------------------R 347

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           S+N  I+  C  + I +A E L  MV     PD  TY+  +   CK    +DA+ +  Q+
Sbjct: 348 SFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL 407

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
           S++      ISY+ +++GL +V K   AVE+   M   G      +   ++ GL    KV
Sbjct: 408 SSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKV 467

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
            +AI+        G       Y  IM+GL K Q+    +  L  M+  GC     +Y  L
Sbjct: 468 HEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTL 527

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLV 614
           I+ ++ +   ++ +   N +   GLV
Sbjct: 528 IKGITYEGLAEEASKLSNELYSRGLV 553



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 168/399 (42%), Gaps = 37/399 (9%)

Query: 300 ALDLMPDELTYEEL-INCLCENLR---LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           AL+ +   L +EE  I+ LC  +R   L++ +  LE M   G  P       ++R  C++
Sbjct: 58  ALNGVNTSLNFEESEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKI 117

Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
           G+   +   +                             ILE+     + D +S+N+ I 
Sbjct: 118 GRTKNATRIMG----------------------------ILEESG--AVIDANSYNVLIN 147

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
             C++ EI +A  +L     +SV P+ ATY A +   C     + A++V  +        
Sbjct: 148 AYCKSGEIEEALRVLDH---TSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYP 204

Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
           D ++ + L++  C+   + +A+++F  M   GC     ++N+LI G C   ++D+AI   
Sbjct: 205 DVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFL 264

Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
               S G      ++  I+  L    R  D + +LA ML +GC   V  + ILI  + ++
Sbjct: 265 KKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQK 324

Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
             L        +M K G  P+  +   L+ G  +   +      +  +VS     D   Y
Sbjct: 325 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTY 384

Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           NIL+  L K+G    A  +L  +  KG  P   ++  ++
Sbjct: 385 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 423



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 108/266 (40%), Gaps = 43/266 (16%)

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           E+  R    ++ +  + D ++ + L+   C++ +   A  +   + ++G  + ++S+N+L
Sbjct: 86  EEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVL 145

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           I   C   ++++A+R+  L ++S  +   +TY  ++  L    + K  + VL + L   C
Sbjct: 146 INAYCKSGEIEEALRV--LDHTS-VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKC 202

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             DV    +LI +  +++ +      FN M   G  PD  T                   
Sbjct: 203 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVT------------------- 243

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-- 696
                           YN+LI G  KEG   +A   L  +   G   D  +H +++ S  
Sbjct: 244 ----------------YNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLC 287

Query: 697 SVGEEIDSRRF---AFDSSSFPDSVS 719
           S G  +D+ +          FP  V+
Sbjct: 288 SGGRWMDAMKLLATMLRKGCFPSVVT 313



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 9/234 (3%)

Query: 106 LGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKL 164
           LG A NV EM      M K  + PN R +   L+  F N   ++ A+  L  M S G   
Sbjct: 327 LGKALNVLEM------MPKHGHTPNSR-SFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP 379

Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
            +  +N++L A+ ++ +   D V +  ++   G  P++ + N +++ L +  + E A++ 
Sbjct: 380 DIVTYNILLTALCKDGK-VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
              M  KG  P+  T   V+ GL    +V +++     +   GI+     Y  I+  LC+
Sbjct: 439 LEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCK 498

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
             +   AI     M A    P E +Y  LI  +      ++A+ +  ++   GL
Sbjct: 499 AQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 4/183 (2%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           YP++    I L+ +     +V+ A+ +L  ++S G   S+  +N V+  ++  K G A+ 
Sbjct: 378 YPDIVTYNI-LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL--KVGKAEL 434

Query: 187 -VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
            V + +EM   G+ P++ T   ++  L    ++  A+  F  +   G  PN+  +  ++ 
Sbjct: 435 AVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMM 494

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           GL    +   ++  L +M   G +   + YT +I  +  E   EEA +L   + +  L+ 
Sbjct: 495 GLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVK 554

Query: 306 DEL 308
             L
Sbjct: 555 KSL 557


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 241/542 (44%), Gaps = 23/542 (4%)

Query: 165 SVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
           SV  FN ++ +    K GF D     +  ++K G+VP+V + N L+  L     I  AL+
Sbjct: 240 SVVSFNSIMSSYC--KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 297

Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
               M+K G  P+S T+ I++KG      +  +  ++ +M D G+  ++  YT ++   C
Sbjct: 298 LASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQC 357

Query: 284 RENKLEEAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           +   ++  + L K M  R  +L    + Y  +++ LC+  R+D+A  +  D+   GLTP 
Sbjct: 358 QLGNIDMGLILLKDMLSRGFEL-KSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPD 416

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCNAGKFFLAKCILE 397
              +  ++ GLC++GKFD +V   ++ C     P++    A++   C  G    A+ +L+
Sbjct: 417 LVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLD 476

Query: 398 KM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            + +     D   +NI I    ++  I +A EL    + S + P+ AT+++ + G CK  
Sbjct: 477 SLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQ 536

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
           N  +A ++   +    LV   +SY+ L++       I    E+   M   G   ++ +++
Sbjct: 537 NIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYS 596

Query: 517 ILIYGLCVMRKVD---KAIRLRSLAY---------SSGTSYTTSTYTKIMLGLVKLQRAK 564
           ++  GLC   K++   + +R R L           S G +    TY  I+  L +++   
Sbjct: 597 VIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLS 656

Query: 565 DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
               +  +M  +        Y ILI S+     ++    F   + K  +   +    +++
Sbjct: 657 RAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVI 716

Query: 625 HGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
                     +     N+L+     +    Y+ +IN L +  L  ++ Y   LML +G  
Sbjct: 717 KAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGIS 776

Query: 685 PD 686
           PD
Sbjct: 777 PD 778



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 221/516 (42%), Gaps = 27/516 (5%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           NV T +Y   VL+     +   D ++ +  K    N  T+  V+ GL    +++D+V  L
Sbjct: 175 NVSTQSYN-SVLYNFRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFL 229

Query: 261 --GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
              E  D+G  + +SF   I+   C+   ++ A   F  +    L+P   ++  LIN LC
Sbjct: 230 RTSEWKDIGPSV-VSF-NSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 287

Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP--- 375
               + +A ++  DM   G+ P    +  +V+G   +G    +   ++D      SP   
Sbjct: 288 LVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVI 347

Query: 376 -HNALLECCCNAGKFFLAKCILEKMADR--KIADCDSWNIPIRWLCENEEIRKAYELLGR 432
            +  LL   C  G   +   +L+ M  R  ++     +++ +  LC+   + +A  L   
Sbjct: 348 TYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYD 407

Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
           +    + PD   YS  + G CKL  ++ A+RV+ ++  + ++ +S +   ++ GLCQ   
Sbjct: 408 LEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGM 467

Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
           + EA  +   +  +G +L    +NI+I G      +++A+ L  +A  SG +   +T+  
Sbjct: 468 LLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNS 527

Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
           ++ G  K Q   +   +L  + + G    V +Y  L+ + +    +K        M   G
Sbjct: 528 LIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEG 587

Query: 613 LVPDRETMLSLLHGLADGSQL--------HLVSSGINKLVSDSE----VLDSSMYNILIN 660
           + P   T   +  GL  G +L          +    N ++ D E      D   YN +I 
Sbjct: 588 IPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQ 647

Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
            L +    S+A  L   M  +   P + T+ +L+ S
Sbjct: 648 YLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDS 683



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/472 (20%), Positives = 200/472 (42%), Gaps = 30/472 (6%)

Query: 147 VNGAMRVLVNMNSGGFKL-SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           ++  + +L +M S GF+L S+  ++V+L  + +  R   + + ++ ++   G+ P++   
Sbjct: 362 IDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGR-VDEALSLFYDLEAYGLTPDLVAY 420

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           + ++  L +  + + A+  +  M  K   PNSRT   ++ GL     + ++ S+L  +  
Sbjct: 421 SIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLIS 480

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G  L++  Y  +I    +   +EEA+ LFK+     + P+  T+  LI   C+   + +
Sbjct: 481 SGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAE 540

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A  IL+ + + GL P+   +  ++      G          +       P N        
Sbjct: 541 ARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSV--- 597

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
               F   C        K+ +C+        +     + K   +L  M    + PD  TY
Sbjct: 598 ---IFKGLC-----RGWKLENCNQ-------VLRERILEKFNHVLRDMESEGITPDQITY 642

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           +  +   C++ +   A  +F+++ +Q+L   S +Y+ L++ LC    I +A      + K
Sbjct: 643 NTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQK 702

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
              SLS  ++  +I   CV    + A+ L +     G + +   Y+ ++  L +   A +
Sbjct: 703 RNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIE 762

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
                  ML  G + D++   ++I+S              +  +K GL+PD+
Sbjct: 763 SKYFFCLMLSRGISPDLDICEVMIKSDE----------LLSWTIKWGLLPDQ 804


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 143/625 (22%), Positives = 259/625 (41%), Gaps = 58/625 (9%)

Query: 30  ANTIPLSSETDMIKSHQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQ 89
           A   P SS T  ++  Q   + +   +     S +H+ +++ +    S AL+ F+W S  
Sbjct: 7   AFAYPTSSPTHFLRRFQFQTHSSSSSAP----SQEHVSQLILDQKSASEALEYFRWASTV 62

Query: 90  KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE-RYPNVREALISLVFSFVNHYRVN 148
             F H+  TY  +I KL      + ++ L   M      P   +  I+++          
Sbjct: 63  PNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTR 122

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
             ++VL  +       S+ +FN +L  +V+E    A   F  K M+ +G+  +  T   L
Sbjct: 123 TVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAR-EFYRKSMMASGVEGDDYTFGIL 181

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L  TNRI       + +  +G  PN+  +  ++  L  N +V  + +++ EM D   
Sbjct: 182 MKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMEDPN- 240

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
             +++F   +I   C+E    +A+ L +   ++  +PD ++  +++  LC   R  +A +
Sbjct: 241 --DVTF-NILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAE 297

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---EDK-CGYVTSPHNALLECCC 384
           +LE +  +G       +  +++G C  GK    ++FL   E+K C      +N L+    
Sbjct: 298 VLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFS 357

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIP-----IRWLCENEEIRKAYELLGRMVVS--- 436
            +G   LA  +   M      D   WN       IR LC  E I   + +L  M  S   
Sbjct: 358 ESGMLDLALDLFNDMK----TDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEG 413

Query: 437 --------------------------------SVVPDCATYSAFVLGKCKLCNYEDALRV 464
                                           ++ P     S  +L  CK    EDA RV
Sbjct: 414 SRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRV 473

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           + Q+  +  +   + Y+ LV G  +   + EAVE+   M  N C    S+FN +I G C 
Sbjct: 474 YDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCR 533

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             KV+ A++L     + G    T TY+ ++  L +    +  + V  QM+ +G   D+  
Sbjct: 534 QGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFI 593

Query: 585 YCILIQSMSEQNKLKDCALFFNVMV 609
           +  L+ S+S++       L  + +V
Sbjct: 594 WNSLLLSLSQERHFSKNMLNIDYIV 618



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/502 (21%), Positives = 207/502 (41%), Gaps = 35/502 (6%)

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPN----SRTFEIVIKGLIANSRVDDSVSILGE 262
           ++ +++ +      AL+ FR        PN      T+  +I  L    R D    +L E
Sbjct: 38  HVSQLILDQKSASEALEYFRW---ASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDE 94

Query: 263 M-FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
           M   LG       +  II  L R       I++  ++      P    +  +++ L +  
Sbjct: 95  MPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKE- 153

Query: 322 RLDDANDIL-EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
            +D A +   + M+  G+   D  F  +++GLC   +  E    L+       +P    +
Sbjct: 154 DIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVY 213

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
           N LL   C  GK   A+ ++ +M D    +  ++NI I   C+     +A  LL +    
Sbjct: 214 NTLLHALCRNGKVGRARNLMNEMED---PNDVTFNILISGYCKEGNSVQALVLLEKSFSM 270

Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEA 496
             VPD  + +  +   C      +A  V  +V +   +LD ++Y+ L++G C   K+   
Sbjct: 271 GFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVG 330

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           +     M   GC  +  ++N+LI G      +D A+ L +   + G  +   T+  ++ G
Sbjct: 331 LHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRG 390

Query: 557 LVKLQRAKDLLVVLAQM--LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
           L   +R +D   +L  M    EG    +  Y  +I  + ++N   + A F   M    L 
Sbjct: 391 LCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKM--GNLF 448

Query: 615 P---DRETMLSLLH----GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
           P   DR  M+ L H     + D  +++      ++++ +  +    +YN L++G  K+G 
Sbjct: 449 PRAVDRSLMI-LEHCKKGAIEDAKRVY------DQMIDEGGIPSILVYNCLVHGFSKQGN 501

Query: 668 TSQASYLLDLMLGKGWVPDATT 689
             +A  L++ M+     P  +T
Sbjct: 502 VREAVELMNEMIANNCFPIPST 523



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 158/415 (38%), Gaps = 73/415 (17%)

Query: 290 EAIRLFKMMRAL-DLMPDELTYEELINCLCENLRLDDANDILEDMI-VIGLTPTDDVFVD 347
           EA+  F+    + + +  + TY  LI+ LC   R D    +L++M   +G  P DD+F+ 
Sbjct: 51  EALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFIT 110

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           I+RGL         +  L+    +  SP          + K F    IL+ +        
Sbjct: 111 IIRGLGRARMTRTVIKVLDLVYKFHGSP----------SLKIF--NSILDVLV------- 151

Query: 408 DSWNIPIRWLCENEEIRKAYELLGR-MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
                        E+I  A E   + M+ S V  D  T+   + G C      +  ++ +
Sbjct: 152 ------------KEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQ 199

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
            + ++ +  +++ Y+ L+  LC+  K+  A  +   M       +  +FNILI G C   
Sbjct: 200 LIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMEDP----NDVTFNILISGYCKEG 255

Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
              +A+ L   ++S G      + TK++  L    R  +   VL ++   G  LDV AY 
Sbjct: 256 NSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYN 315

Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
            LI+      K+K    F   M   G +P+ +T                           
Sbjct: 316 TLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDT--------------------------- 348

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE 701
                   YN+LI+G  + G+   A  L + M   G   +  T   L+     EE
Sbjct: 349 --------YNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEE 395


>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 484

 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/482 (22%), Positives = 223/482 (46%), Gaps = 22/482 (4%)

Query: 60  NLSP--DH--LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEM 115
           NL P  DH  +  VL +  +   AL+ F+WV     F+H  +T+ K+I  LG A  +   
Sbjct: 5   NLVPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHA 64

Query: 116 EGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
             +  +M K+      +  + ++ S+     V  ++++   M   G + ++  ++ +   
Sbjct: 65  RCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKV 124

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCP 235
           I+   R      + + +M+  GI P   T N ++   F + ++E+A   F  M  +   P
Sbjct: 125 ILRRGRYMMAKRY-FNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMP 183

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           +  T+  ++ G     +++++     EM    I+  +  YT +I      +++++A+RL 
Sbjct: 184 DVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLV 243

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD-VFVDIVRGLCE 354
           + M+   + P+ +TY  L+  LC   ++ +A  IL++M+   + PTD+ +F+ ++ G C+
Sbjct: 244 EEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCK 303

Query: 355 VGKFDESVNFLEDKCGYVTSPHNA-----LLECCCNAGKFFLAKCILEKMADRKI----- 404
            G  D + N L+     ++ P  A     L+E  C AG++  A  +L+K+ ++ I     
Sbjct: 304 AGDLDAAANVLKAMI-RLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQ 362

Query: 405 ----ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
                +  ++N  I +LC N +  KA E L R ++   V D    +  + G  +  + + 
Sbjct: 363 STLHMESSAYNPLIEYLCNNGQTAKA-EALVRQLMKLGVQDPTALNTLIRGHSQEGSPDS 421

Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
           A  + + +  + +  +  SY  LV+   +  +  +A      M +NG    SS F  ++ 
Sbjct: 422 AFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVME 481

Query: 521 GL 522
            L
Sbjct: 482 SL 483



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/463 (22%), Positives = 200/463 (43%), Gaps = 49/463 (10%)

Query: 289 EEAIRLFKMMRALDLMP-DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           E A++ F+ +   +L   +  T+ ++I  L    +L+ A  IL DM   GL   +D++V 
Sbjct: 26  EHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVL 85

Query: 348 IVRGLCEVGKFDESVNFLE--DKCG--YVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
           ++    + G   ESV   +  ++ G       ++AL +     G++ +AK    KM    
Sbjct: 86  MIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145

Query: 404 IADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           I     ++N+ +     + ++  A      M    ++PD  TY+  V G C++   E+A 
Sbjct: 146 IEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAE 205

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           + F ++  +++    ++Y+ L++G   V+++ +A+ +   M   G   ++ +++ L+ GL
Sbjct: 206 KYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGL 265

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ-RAKDLLV---VLAQMLVEGC 578
           C   K+ +A   RS+       Y   T   I + L+  Q +A DL     VL  M+    
Sbjct: 266 CNAEKMSEA---RSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSV 322

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             +   Y +LI++  +  +        + +++  ++            L   S LH+ SS
Sbjct: 323 PTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDII------------LRPQSTLHMESS 370

Query: 639 GINKLV---------SDSEVL----------DSSMYNILINGLWKEGLTSQASYLLDLML 679
             N L+         + +E L          D +  N LI G  +EG    A  LL +ML
Sbjct: 371 AYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIML 430

Query: 680 GKGWVPDATTHGLLVGSSVGE-EIDSRRFAFDS----SSFPDS 717
            +    + +++  LV S + + E    + A DS       PDS
Sbjct: 431 RRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHLPDS 473


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 202/452 (44%), Gaps = 9/452 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A+     M   GF    +  N +L  +    R    +VF Y +M +  I  NV T N
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF-YADMYRMEIKSNVYTFN 229

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            ++ VL +  +++ A      M   G  P   T+  +++G     R++ +  I+ EM   
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G Q ++  Y  I+  +C E +  E +R    M+ + L+PD ++Y  LI     N  L+ A
Sbjct: 290 GFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLEC 382
               ++M+  G+ PT   +  ++ GL    K + +   + +  + G V  +  +N L+  
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G    A  + ++M    I     ++   I  LC   + R+A EL  ++V   + PD
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
               +  + G C + N + A  + +++   S+  D ++Y+ L+ GLC   K  EA E+  
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G      S+N LI G         A  +R    S G + T  TY  ++ GL K Q
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
             +    +L +M  EG   +  ++C +I++MS
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/442 (22%), Positives = 198/442 (44%), Gaps = 8/442 (1%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G  P  +T N++L +L   NRIE+A   +  M++     N  TF I+I  L    +
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +  +   LG M   GI+  +  Y  ++       ++E A  +   M++    PD  TY  
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCG 370
           +++ +C   R   A+++L +M  IGL P    +  ++RG    G  + +  + ++  K G
Sbjct: 301 ILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357

Query: 371 YVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAY 427
            V +   +N L+       K   A+ ++ ++ ++ I  D  ++NI I   C++ + +KA+
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L   M+   + P   TY++ +   C+     +A  +F +V  + +  D +  + L++G 
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C +  +  A  +   M     +    ++N L+ GLC   K ++A  L       G     
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +Y  ++ G  K    K   +V  +ML  G    +  Y  L++ +S+  + +        
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597

Query: 608 MVKAGLVPDRETMLSLLHGLAD 629
           M   G+VP+  +  S++  +++
Sbjct: 598 MKSEGIVPNDSSFCSVIEAMSN 619



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 168/388 (43%), Gaps = 63/388 (16%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-------------- 181
           +LV  F    R+ GA  ++  M S GF+  +  +N +L  +  E R              
Sbjct: 265 TLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLV 324

Query: 182 ----------------GFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
                           G  +  F Y+ EMVK G+VP   T N L+  LF  N+IE+A   
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            R + +KG   +S T+ I+I G   +     + ++  EM   GIQ     YT +I +LCR
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
           +NK  EA  LF+ +    + PD +    L++  C    +D A  +L++M ++ + P D  
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  ++RGLC  GKF+E                               A+ ++ +M  R I
Sbjct: 505 YNCLMRGLCGEGKFEE-------------------------------ARELMGEMKRRGI 533

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  S+N  I    +  + + A+ +   M+     P   TY+A + G  K    E A  
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEE 593

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           + R++ ++ +V +  S+  ++E +  ++
Sbjct: 594 LLREMKSEGIVPNDSSFCSVIEAMSNLD 621



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/482 (23%), Positives = 204/482 (42%), Gaps = 14/482 (2%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N I +  D+    H +    ++  F+++++       VD+++     M + G   +    
Sbjct: 134 NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC 193

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             I+ +L R N++E A   +  M  +++  +  T+  +IN LC+  +L  A   L  M V
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            G+ PT   +  +V+G    G+ + +   + +       P    +N +L   CN G+   
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR--- 310

Query: 392 AKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +L +M +   + D  S+NI IR    N ++  A+     MV   +VP   TY+  + 
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G       E A  + R++  + +VLDS++Y+ L+ G CQ     +A  +   M  +G   
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
           +  ++  LIY LC   K  +A  L       G          +M G   +        +L
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490

Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA-- 628
            +M +     D   Y  L++ +  + K ++       M + G+ PD  +  +L+ G +  
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550

Query: 629 -DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
            D     +V   +  L  +  +L    YN L+ GL K      A  LL  M  +G VP+ 
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLL---TYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607

Query: 688 TT 689
           ++
Sbjct: 608 SS 609



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 3/285 (1%)

Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
           +++ +R  C+   + +A E    M      P   T +  +    +L   E+A   +  + 
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217

Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
              +  +  +++ ++  LC+  K+ +A      M   G   +  ++N L+ G  +  +++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277

Query: 530 KAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
            A  + S   S G      TY  I+  +    RA +   VL +M   G   D  +Y ILI
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILI 334

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
           +  S    L+    + + MVK G+VP   T  +L+HGL   +++      I ++     V
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           LDS  YNILING  + G   +A  L D M+  G  P   T+  L+
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 3/292 (1%)

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
           ++NI I  LC+  +++KA   LG M V  + P   TY+  V G       E A  +  ++
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
            ++    D  +Y+ ++  +C   +   A EV   M + G    S S+NILI G      +
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           + A   R      G   T  TY  ++ GL    + +   +++ ++  +G  LD   Y IL
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
           I    +    K      + M+  G+ P + T  SL++ L   ++         K+V    
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
             D  M N L++G    G   +A  LL  M      PD  T+  L+    GE
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 3/267 (1%)

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+L   ++A+  F  +  +     + + + ++  L ++ +I  A   +  M +     + 
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +FNI+I  LC   K+ KA     +    G   T  TY  ++ G     R +   +++++
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M  +G   D++ Y  ++  M  + +  +       M + GLVPD  +   L+ G ++   
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASEV---LREMKEIGLVPDSVSYNILIRGCSNNGD 342

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L +  +  +++V    V     YN LI+GL+ E     A  L+  +  KG V D+ T+ +
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402

Query: 693 LVGSSVGEEIDSRRFAFDSSSFPDSVS 719
           L+          + FA       D + 
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQ 429


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 18/444 (4%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +  I+  L + N    AI LF+ +    + P  +T   L+NC C    +     IL  ++
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCN 385
            +G  P    F  +++G+C  G+  E++ F +         D+  Y       L+   C 
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI-----LMNGLCK 127

Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
            G+   A  +L K      AD   ++  I  LC+ + +  AY L   M+   + P+  T+
Sbjct: 128 MGETRAAMQMLRKTWVN--ADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTF 185

Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
           S  V   CK    + A+ +   +  + +  + ++Y  +++G C V ++ +A+ +F  M +
Sbjct: 186 SILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQ 245

Query: 506 NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD 565
            G   +   +NI+I GLC  ++VD+A+ L    +    +    TY  ++ GL KL +   
Sbjct: 246 EGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIST 305

Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
            L ++ +M   G  +D+  Y  L+ ++ + + L         +   G+ P+  T  +L+ 
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLID 365

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
           GL    +L        +++++   +    YN++INGL K+GL  +A  LL  M     +P
Sbjct: 366 GLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIP 425

Query: 686 DATTHGLLVG--SSVGEEIDSRRF 707
           DA ++  ++   S  GE + + + 
Sbjct: 426 DAVSYETIIYALSEKGETVKTNKL 449



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/464 (22%), Positives = 209/464 (45%), Gaps = 34/464 (7%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           FN +L ++V+    +   + +++++   GI P++ TL  L+     T  I        ++
Sbjct: 13  FNHILASLVKINH-YPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKI 71

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K G  PNS TF  +IKG+  N +  +++     +   G +L+   Y  ++  LC+  + 
Sbjct: 72  LKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGET 131

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
             A++   M+R   +  D + Y  +I+ LC+   + DA  +  +MI  G+ P    F  +
Sbjct: 132 RAAMQ---MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSIL 188

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
           V  LC+  K  +++N L         P+          G      C++            
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGVKPN------VVTYGAIMDGYCLVN----------- 231

Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
                        ++ KA  +   MV   V P+   Y+  + G CK    ++A+ +F+++
Sbjct: 232 -------------QVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278

Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
             + +  D ++Y+ L++GLC++ KI+ ++E+   M   G ++   ++N L++ LC    +
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338

Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
           D+AI L       G      TYT ++ GL K  R +D  V+  ++L EG  + V  Y ++
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVM 398

Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           I  + ++    +     + M     +PD  +  ++++ L++  +
Sbjct: 399 INGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGE 442



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 155/327 (47%), Gaps = 32/327 (9%)

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
            D   +Y EM+  GI PNV T + L++ L +  + + A++    M KKG  PN  T+  +
Sbjct: 164 TDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAI 223

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           + G    ++V+ +++I   M   G++  +  Y  II  LC++ +++EA+ LFK M    +
Sbjct: 224 MDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKI 283

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            PD +TY  LI+ LC+  ++  + +++++M  IG T      VDI+              
Sbjct: 284 NPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKT------VDIIT------------- 324

Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
                       +N+LL   C       A  +++++ D+ I  +  ++   I  LC++  
Sbjct: 325 ------------YNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGR 372

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           +  AY +   ++         TY+  + G CK   +++AL +  ++   + + D++SY  
Sbjct: 373 LEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYET 432

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCS 509
           ++  L +  +  +  ++ C M   G S
Sbjct: 433 IIYALSEKGETVKTNKLLCAMIVRGLS 459



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 129/247 (52%), Gaps = 8/247 (3%)

Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK- 180
           + K  +PNV    I LV +     +   AM +L  M   G K +V    V  GAI++   
Sbjct: 174 IAKGIFPNVYTFSI-LVDALCKDRKGKQAMNLLAMMMKKGVKPNV----VTYGAIMDGYC 228

Query: 181 --RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
                   + ++  MV+ G+ PNV   N ++  L +  R++ A++ F+ MH K   P+  
Sbjct: 229 LVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288

Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
           T+ I+I GL    ++  S+ ++ EM  +G  +++  Y  ++  LC+ + L++AI L K +
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348

Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
           +   + P+  TY  LI+ LC++ RL+DA  I ++++  G   T   +  ++ GLC+ G F
Sbjct: 349 KDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLF 408

Query: 359 DESVNFL 365
           DE++  L
Sbjct: 409 DEALALL 415



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 1/194 (0%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
           RV+ AM +   M+       V  +N+++  + +  +       V  EM   G   ++ T 
Sbjct: 267 RVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELV-DEMRSIGKTVDIITY 325

Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
           N LL  L + + ++ A+   + +  +G  PN  T+  +I GL  + R++D+  I  E+  
Sbjct: 326 NSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILT 385

Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
            G  + +  Y  +I  LC++   +EA+ L   M     +PD ++YE +I  L E      
Sbjct: 386 EGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVK 445

Query: 326 ANDILEDMIVIGLT 339
            N +L  MIV GL+
Sbjct: 446 TNKLLCAMIVRGLS 459


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 198/437 (45%), Gaps = 5/437 (1%)

Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
           F D   ++ EMV +  +P++     LL       R E+ +   ++M   G   +  +F I
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I      SR+  ++S+LG+M  LG +  +  +  ++   C  N++ +A  L  +M    
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ + Y  LI+ LC+N  L+ A ++L +M   GL      +  ++ GLC  G++ ++ 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWL 417
             L D      +P      AL++     G    A+ + ++M    +   + ++N  I  L
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           C +  +  A +    M      P+  TY+  + G CK    ++ +++F+++S +    D 
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +Y+ L+ G CQV K+  A+++FC M     +    +  IL++GLCV  +++ A+     
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
              S        Y  ++ GL K  + +    +  ++ VEG   D   Y I+I  + +   
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 598 LKDCALFFNVMVKAGLV 614
            ++       M + G++
Sbjct: 472 RREADELIRRMKEEGII 488



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 209/476 (43%), Gaps = 9/476 (1%)

Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADF 186
           + + RE L +    F++  R   A  +   M       S+  F  +L A    +R +   
Sbjct: 35  FSDYREKLRT---GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRR-YETV 90

Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
           ++  ++M   GI  ++ +   L+      +R+  AL    +M K G  P+  TF  ++ G
Sbjct: 91  IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
               +R+ D+ S++  M   G +  +  Y  +I  LC+  +L  A+ L   M    L  D
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
            +TY  L+  LC + R  DA  +L DM+   + P    F  ++    + G  DE+    +
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENE 421
           +       P    +N+++   C  G+ + AK   + MA +    +  ++N  I   C+  
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            + +  +L  RM       D  TY+  + G C++     AL +F  + ++ +  D I++ 
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GLC   +I  A+  F  M ++   +   ++NI+I+GLC   KV+KA  L       
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
           G      TYT ++LGL K    ++   ++ +M  EG    + A    ++  S  NK
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK 506



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 203/444 (45%), Gaps = 5/444 (1%)

Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
           G + + R +D+ ++  EM        +  +T ++       + E  I   + M    +  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF- 364
           D  ++  LI+C C   RL  A  +L  M+ +G  P+   F  ++ G C V +  ++ +  
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 365 -LEDKCGYVTSP--HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCEN 420
            L  K GY  +   +N L++  C  G+  +A  +L +M  + + AD  ++N  +  LC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
                A  +L  M+  S+ PD  T++A +    K  N ++A  +++++   S+  ++++Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
           + ++ GLC   ++ +A + F  M+  GC  +  ++N LI G C  R VD+ ++L      
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
            G +    TY  ++ G  ++ + +  L +   M+      D+  +CIL+  +    +++ 
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
             + F+ M ++           ++HGL    ++        +L  +    D+  Y I+I 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 661 GLWKEGLTSQASYLLDLMLGKGWV 684
           GL K G   +A  L+  M  +G +
Sbjct: 465 GLCKNGPRREADELIRRMKEEGII 488



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 203/453 (44%), Gaps = 25/453 (5%)

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
           R F+D    Y+E ++ G + ++              R E A   F  M      P+   F
Sbjct: 33  RAFSD----YREKLRTGFLHSI--------------RFEDAFALFFEMVHSQPLPSIVDF 74

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDL-GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
             ++    AN R  ++V    +  +L GI  +L  +T +I   CR ++L  A+ +   M 
Sbjct: 75  TRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
            L   P  +T+  L++  C   R+ DA  ++  M+  G  P   V+  ++ GLC+ G+ +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193

Query: 360 ---ESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
              E +N +E K  G     +N LL   C +G++  A  +L  M  R I  D  ++   I
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
               +   + +A EL   M+ SSV P+  TY++ + G C      DA + F  ++++   
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
            + ++Y+ L+ G C+   + E +++F  MS  G +    ++N LI+G C + K+  A+ +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
                S   +    T+  ++ GL      +  LV    M      + + AY I+I  + +
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            +K++     F  +   G+ PD  T   ++ GL
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 86/213 (40%)

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
           KL  G     +  +A  +F  M  +    S   F  L+     +R+ +  I         
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G S+   ++T ++    +  R    L VL +M+  G    +  +  L+      N++ D 
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                +MVK+G  P+     +L+ GL    +L++    +N++       D   YN L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L   G  S A+ +L  M+ +   PD  T   L+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253


>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
 gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
          Length = 594

 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 203/424 (47%), Gaps = 33/424 (7%)

Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
           E  I+++  FVN  R++ A++VL  M   G    +  +N+V+G + ++       + +  
Sbjct: 173 ECCINMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGH-LESAIELLN 231

Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
           +M  +G  P+V T N ++  +F+    + A++ ++   +KG  P   T+ I+I+ +  + 
Sbjct: 232 DMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHR 291

Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
               ++ +L EM + G   +L  Y  +I + C++ K E+A  +   +    ++PD +TY 
Sbjct: 292 GTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYN 351

Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI-VRGLCEVGKFDESVNFLEDKCG 370
            L++ L      D+ ++IL+ ++ I L P   V  ++ + GLC+ G  D ++NFL     
Sbjct: 352 TLLHSLSRRGHWDEVDEILK-IMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFS 410

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
           Y   P                              D  ++N  +  LC+   + +A++LL
Sbjct: 411 YNCLP------------------------------DIITYNTLLGALCKEGMVDEAFQLL 440

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
             +  ++  P   +Y+  + G  +    + A+ ++ Q+    ++ D  ++  ++ G C+ 
Sbjct: 441 HLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRS 500

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K  EAVE    + K G  ++SS + IL++ LC+ +KVD AI++  +  SS      + Y
Sbjct: 501 NKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIY 560

Query: 551 TKIM 554
           + I+
Sbjct: 561 STII 564



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 185/425 (43%), Gaps = 33/425 (7%)

Query: 275 YTCIIPML---CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           + C I M+      +++++A+++ K+M     +PD +TY  +I CLC+   L+ A ++L 
Sbjct: 172 FECCINMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLN 231

Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL 391
           DM + G  P    +  ++R + + G FD++V F +++    T P             + +
Sbjct: 232 DMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPP-------------YLI 278

Query: 392 AKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
              IL               I + W  ++     A E+L  M      PD  TY++ +  
Sbjct: 279 TYTIL---------------IELVW--KHRGTVCALEVLEEMANEGCYPDLVTYNSLINL 321

Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
            CK   +EDA  V   +    +V D+++Y+ L+  L +     E  E+   MS +    +
Sbjct: 322 TCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPT 381

Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
             + N+LI GLC    +D AI   +  +S        TY  ++  L K     +   +L 
Sbjct: 382 VVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLH 441

Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
            +    C+  + +Y  ++  +S +  +      ++ M++ G++PD  T  S++ G    +
Sbjct: 442 LLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSN 501

Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
           +       +  ++     ++SS Y IL++ L        A  +L++ML      + T + 
Sbjct: 502 KFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYS 561

Query: 692 LLVGS 696
            ++ S
Sbjct: 562 TIINS 566



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 186/421 (44%), Gaps = 18/421 (4%)

Query: 212 LFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
           L E +R+   +    ++    CC N      +I+G +   R+D +V +L  M   G   +
Sbjct: 153 LMEASRVVDIMASRNQIPDFECCIN------MIRGFVNTDRMDKAVQVLKIMVMSGGVPD 206

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  Y  +I  LC++  LE AI L   M      PD +TY  +I  + +N   D A +  +
Sbjct: 207 IITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWK 266

Query: 332 DMIVIGLTP---TDDVFVDIV---RG-LCEVGKFDESVNFLEDKCGYVTSPHNALLECCC 384
           + +  G  P   T  + +++V   RG +C +   +E  N   + C      +N+L+   C
Sbjct: 267 EQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMAN---EGCYPDLVTYNSLINLTC 323

Query: 385 NAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCA 443
             GKF  A  +++ +     + D  ++N  +  L       +  E+L  M +S   P   
Sbjct: 324 KQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVV 383

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM 503
           T +  + G CK    + A+    Q+ + + + D I+Y+ L+  LC+   + EA ++   +
Sbjct: 384 TCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLL 443

Query: 504 SKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRA 563
           +   CS    S+N ++ GL     +DKA+ L S    +G     +T+  I+ G  +  + 
Sbjct: 444 TDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKF 503

Query: 564 KDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSL 623
            + +  L  +L  G  ++   Y IL+  +   NK  D A+    M+ +      ET+ S 
Sbjct: 504 VEAVETLKGILKGGYEVNSSFYRILVHELC-LNKKVDLAIQVLEMMLSSPCKSNETIYST 562

Query: 624 L 624
           +
Sbjct: 563 I 563



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 7/320 (2%)

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D ++ N+ ++  C   ++ +A  ++  M   + +PD       + G       + A++V 
Sbjct: 136 DEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVL 195

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           + +     V D I+Y+ ++  LC+   +  A+E+   MS +GC     ++N +I  +   
Sbjct: 196 KIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDN 255

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKD-LLVVLAQMLVEGCALDVEA 584
              D+A+         GT     TYT I++ LV   R     L VL +M  EGC  D+  
Sbjct: 256 GCFDQAVEFWKEQLRKGTPPYLITYT-ILIELVWKHRGTVCALEVLEEMANEGCYPDLVT 314

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  LI    +Q K +D AL  + ++  G+VPD  T  +LLH L+       V   +  + 
Sbjct: 315 YNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMS 374

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS 704
              +       N+LINGL K GL   A   L+ M     +PD  T+  L+G+   E +  
Sbjct: 375 ISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVD 434

Query: 705 RRFAF-----DSSSFPDSVS 719
             F       D++  P  +S
Sbjct: 435 EAFQLLHLLTDTACSPGLIS 454


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 254/574 (44%), Gaps = 12/574 (2%)

Query: 53  KIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNV 112
           +++ L   L P  +  V+   +D  +A++ + W   +  F H+      ++  L + GN 
Sbjct: 80  ELERLDVELDPIVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNF 139

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFS-FVNHYRVNGAMRVLVNM-NSGGFKLSVDVFN 170
             +       VK +   +  +L  ++ S +V   + +  +     M  SG  +  VD +N
Sbjct: 140 ALLSEFL-GRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVD-YN 197

Query: 171 VVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
             +G +V  K    D V  Y +M  A G      T +  +  L ++NRIE   +    M 
Sbjct: 198 RYIGVLV--KNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMD 255

Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
           K GC P+     I I  L   +R+ D++ ++ +M   G   ++  Y  ++  LC   K  
Sbjct: 256 KLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFA 315

Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
           EAI L++ M   DL PD  +   LI  LC+N ++D+A ++   M+ + +  +  ++  ++
Sbjct: 316 EAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALI 375

Query: 350 RGLCEVGKFDES---VNFLE-DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI- 404
            G    G  D++   ++F+  + C      +N LL   C  G    A+ ++ KM    + 
Sbjct: 376 SGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVN 435

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
            D  S+N  ++ LC+  ++ KA+  +   +      D  + +  +   CK    + AL +
Sbjct: 436 PDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALEL 495

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F+++  + +  D+++Y  L+ GL  V     A E+F  M       + + +NI+++ LC 
Sbjct: 496 FKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCK 555

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
           +    +A  + S       S  T T+  ++  L K  RA + L +   M   G   D   
Sbjct: 556 VGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLT 615

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
           +  LI  + ++ K       +  M++ G++ DRE
Sbjct: 616 FKYLISGLLDEGKSTLAYEVWEYMMENGIILDRE 649



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 117/578 (20%), Positives = 234/578 (40%), Gaps = 48/578 (8%)

Query: 163 KLSVDVFNVVLGAIVEEKRGFAD----FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
           +L V++  +V+  +V   RG +D      F +    + G   +   + YL+ +LF     
Sbjct: 83  RLDVELDPIVVNLVV---RGLSDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNF 139

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
               +   R+  +G   +   + I++ G +   + D  +    EM   G +     Y   
Sbjct: 140 ALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRY 199

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I +L +    +   + + M  A        TY   I+ LC++ R++   ++L DM  +G 
Sbjct: 200 IGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGC 259

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
           +P        +  LC+  +  +++  +E      TSP                       
Sbjct: 260 SPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSP----------------------- 296

Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
                  D  ++   +  LC+N++  +A  L   MV   + PD  +  A + G CK    
Sbjct: 297 -------DVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKV 349

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
           ++A  +  ++    + L    Y+ L+ G  +   I +A ++   M  NGC     ++NIL
Sbjct: 350 DEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNIL 409

Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
           +   C +  ++KA +L     +SG +    +Y +++ GL K  +       ++  +  G 
Sbjct: 410 LNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGG 469

Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
             D  +  ILI +  +  K+K     F  M   G+  D  T  +L++GL      +L   
Sbjct: 470 FCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEE 529

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV---- 694
              ++++     + ++YNI+++ L K G   +A  +   M+ K   PD  T   L+    
Sbjct: 530 LFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLG 589

Query: 695 -------GSSVGEEIDSRRFAFDSSSFPDSVSDILAEG 725
                    ++ +++ +R    D+ +F   +S +L EG
Sbjct: 590 KRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEG 627


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 213/466 (45%), Gaps = 24/466 (5%)

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           I+ L+    V  + +I+ EM   G   ++  +  +I    +    +        M    L
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P+ + Y  LI+CLC+   L +A   L+ M      P    +  I+ G C+    ++++ 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 364 FLED--KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLC 418
           FL +  + G+  +PH  +++++  C  G    A  +  +M  +    D  ++N+ +  L 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
              +I +A EL   M      PD  TY+  + G CK    ++A+ +  ++  + +    +
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN--ILIYGLCVMRKVDKAIRLRS 536
           +Y+ L++ LC+  ++ +A EVF  M++  C  +  +++  ILI GLC  R+  +A  +  
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
                G S T  TY  ++ GL+   + +D + +   ML +  A ++  Y ILI S+ + +
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLA------DGSQLHLVSSGIN--KLVSDSE 648
           ++++     + M   G VP  +    LL  LA      D  +L+   S IN  +LV  S 
Sbjct: 360 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSS- 418

Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                  NIL++G+ + G   +A   L  M   G VPD  T+  LV
Sbjct: 419 -------NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLV 457



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 192/457 (42%), Gaps = 33/457 (7%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M++AG+ PN    N L+  L +   +  A    +RM +  C PN  ++ I+I G      
Sbjct: 55  MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 113

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           ++ +++ L EM +LG       Y+ I+   C+   + +A+ +F  M A    PD + +  
Sbjct: 114 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 173

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           L++ L    ++ +A ++   M   G  P    +  ++ GLC+  K DE+V  LE      
Sbjct: 174 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
            SP                                 ++   I  LC+   +++AYE+  +
Sbjct: 234 VSPTFV------------------------------TYTTLIDHLCKFARLQQAYEVFEK 263

Query: 433 MVVSSVVPDCATYSAFVL--GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
           M           YS  +L  G CK     +A  +F+++  + +    ++Y+ L+EGL   
Sbjct: 264 MAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLST 323

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
            K+ +A+E+   M     + +  ++ ILI  LC   +V++A +L S     G   +   +
Sbjct: 324 AKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIW 383

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++  L +  R  D   +  +M    C   V +  IL+  +  +  + +   F   M  
Sbjct: 384 EVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTD 443

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
            G+VPD+ T   L+ GL    +       + +LV D 
Sbjct: 444 TGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 169/354 (47%), Gaps = 13/354 (3%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           +EM + G  P     + +++   +T  +  A+D F  M  KGC P+   F +++ GL   
Sbjct: 122 REMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRA 181

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            ++ ++  +   M   G + ++  Y  +I  LC+  KL+EA+ L + M+  D+ P  +TY
Sbjct: 182 RKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTY 241

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVF--VDIVRGLCEVGKFDESVNFLEDK 368
             LI+ LC+  RL  A ++ E M       T+  +  + ++ GLC+  +  E+    ++ 
Sbjct: 242 TTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEM 301

Query: 369 CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
            G   SP    +N LLE   +  K   A  +   M D+  A +  ++ I I  LC+ +++
Sbjct: 302 RGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQV 361

Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS---AQSLVLDSISY 480
            +A++LL  M     VP    +   +    +    +DA  +++++S    Q LV  S   
Sbjct: 362 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSS--- 418

Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           + L++G+ +   + EA +    M+  G      +++ L+ GLC   K D+A +L
Sbjct: 419 NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKL 472


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 125/550 (22%), Positives = 225/550 (40%), Gaps = 70/550 (12%)

Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV-FVYKEMVKAGIVPNVDT 204
           R+  A+  L       F  SV  FN ++      K G  D     +  M+K G++P+V +
Sbjct: 250 RLQDAVTFLRETGGEEFGPSVVSFNALMSGFC--KMGSVDVAKSFFCMMIKYGLLPDVYS 307

Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
            N LL  L     +E AL+    M   G  P+  T+ I+  G      +  +  ++  M 
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
             G+  +L  YT +I   C+   +EE+ +L + M +  L    +TY  L++ LC++ R+D
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 325 DANDILEDMIVIGLT---------------------------PTDDVFVDIVRGLCEVGK 357
           +A  +L +M VIGL                            P   V   I+ GL E G 
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 487

Query: 358 FDESVNFLEDKC----------------GYVT-------------------SP----HNA 378
             E+  + +                   GY                     SP     N+
Sbjct: 488 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 547

Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSS 437
           L+   C  GK   A  +L+ +    +     ++   +   CE  ++   +++L  M   +
Sbjct: 548 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 607

Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
           + P   TY+  V G CK     +++++ + + A+ L  D I+Y+ +++  C+   + +A 
Sbjct: 608 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 667

Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
           ++   M ++    S  ++N+LI GLCV   +  A RL           T   YT I+   
Sbjct: 668 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 727

Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDR 617
                 ++ LV   QM+  G  + +  Y  +I  + ++N + D   FF +M+  G+ PD+
Sbjct: 728 CAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQ 787

Query: 618 ETMLSLLHGL 627
           +  L +L+  
Sbjct: 788 DICLVMLNAF 797



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 145/637 (22%), Positives = 267/637 (41%), Gaps = 54/637 (8%)

Query: 70  LDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER--- 126
           +DN++   SAL +F  +  +  F+H+  ++  +   +   G  +E+  +   MV+E    
Sbjct: 92  VDNSD---SALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSG 148

Query: 127 -YPNVREALIS--------------LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNV 171
             P++ E L +              L  ++     V+ A+ VL  M     ++S+  +N 
Sbjct: 149 SAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNS 208

Query: 172 VLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK 230
           +L  +        D ++ VY E+  +G+  N  T   L++ L   +R++ A+   R    
Sbjct: 209 LLYNLRH-----TDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGG 263

Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
           +   P+  +F  ++ G      VD + S    M   G+  ++  Y  ++  LC    +EE
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEE 323

Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
           A+     M    + PD +TY  L N       +  A  +++ M++ GL P    +  ++ 
Sbjct: 324 ALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILIC 383

Query: 351 GLCEVGKFDESVNFLED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           G C++G  +ES    E       K   VT  +  LL   C +G+   A  +L +M    +
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVT--YTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
                   P         + +A EL   M    + P+    SA + G  +     +A   
Sbjct: 442 K-------PDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMY 494

Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
           F  V+   +  + I Y+ +++G  ++  I EAV  +  + + G S +  +FN LIYG C 
Sbjct: 495 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 554

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             K+ +A++L       G   T+ TYT +M G  +      +  +L +M  +        
Sbjct: 555 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQIT 614

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL------HGLADGSQLHLVSS 638
           Y ++++ + ++ +L +       M   GL PD+ T  +++      H L    QLH    
Sbjct: 615 YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLH---- 670

Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
             N+++  S       YN+LINGL   G    A  LL
Sbjct: 671 --NQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 705



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/476 (22%), Positives = 208/476 (43%), Gaps = 35/476 (7%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V D++ +L +M  L +Q+ ++ Y  ++  L   + + +   ++  ++A  +  +E T   
Sbjct: 184 VHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNEYTNPI 240

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ LC   RL DA   L +       P+   F  ++ G C++G  D + +F      Y 
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 373 TSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
             P    +N LL   C AG    A      M +  +  D  ++NI          I  A+
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
           +++ RM+++ + PD  TY+  + G C++ N E++ ++  ++ +Q L L  ++Y+ L+  L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420

Query: 488 CQVEKITEAVEVFCCMSKNG-----------------------CS--LSSSSF--NILIY 520
           C+  +I EAV +   M   G                       CS  +  +SF  + +I 
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 480

Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
           GL     + +A         S  +     Y  ++ G  KL    + +    Q++ +G + 
Sbjct: 481 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 540

Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
            +  +  LI    ++ KL +     + +   GLVP   T  +L++G  +   +H +   +
Sbjct: 541 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDML 600

Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
           +++ + +       Y +++ GL KEG   ++  LL  M  +G  PD  T+  ++ S
Sbjct: 601 HEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS 656



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 3/220 (1%)

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
           L+++ +  L     + E + +A+ V   M      +S +++N L+Y L   R  D    +
Sbjct: 166 LNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDV 222

Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
            +   +SG      T   ++ GL +  R +D +  L +   E     V ++  L+    +
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
              +     FF +M+K GL+PD  +   LLHGL     +       N + +     D   
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           YNIL NG    GL S A  ++  ML  G  PD  T+ +L+
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILI 382


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 203/455 (44%), Gaps = 9/455 (1%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+ A+     M   GF    +  N +L  +    R    +VF Y +M +  I  NV T N
Sbjct: 172 VDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVF-YADMYRMEIKSNVYTFN 230

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            ++ VL +  +++ A      M   G  P   T+  +++G     R++ +  I+ EM   
Sbjct: 231 IMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSK 290

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G Q +L  Y  I+  +C E +  E +R    M+ + L+PD ++Y  LI     N  L+ A
Sbjct: 291 GFQPDLQTYNPILSWMCNEGRASEVLR---EMKGIGLVPDSVSYNILIRGCSNNGDLETA 347

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLEC 382
               ++M+  G+ PT   +  ++ GL    K + +   + +  + G V  +  +N ++  
Sbjct: 348 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVING 407

Query: 383 CCNAGKFFLAKCILEKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G    A  + ++M    I     ++   I  LC   + R+A EL  ++V   + PD
Sbjct: 408 YCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPD 467

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
               +  + G C   N + A  + +++   ++  D ++Y+ L+ GLC   K  EA E+  
Sbjct: 468 LVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMG 527

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M + G      S+N LI G         A  +R    S G + T  TY  ++ GL K Q
Sbjct: 528 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQ 587

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
             +    +L +M  EG   +  ++C +I++MS+ +
Sbjct: 588 DGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSD 622



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/441 (22%), Positives = 195/441 (44%), Gaps = 8/441 (1%)

Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
           M + G  P  +T N++L +L   NRIE+A   +  M++     N  TF I+I  L    +
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           +  +   LG M   GI+  +  Y  ++       ++E A  +   M++    PD  TY  
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNP 301

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCG 370
           +++ +C   R   A+++L +M  IGL P    +  ++RG    G  + +  + ++  K G
Sbjct: 302 ILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQG 358

Query: 371 YVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAY 427
            V +   +N L+       K   A+ ++ ++ ++ I  D  ++NI I   C++ + +KA+
Sbjct: 359 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAF 418

Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
            L   M+   + P   TY++ +   C+     +A  +F +V  + +  D +  + L++G 
Sbjct: 419 ALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 478

Query: 488 CQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
           C    +  A  +   M +        ++N L+ GLC   K ++A  L       G     
Sbjct: 479 CATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 538

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            +Y  ++ G  K    K   +V  +ML  G    +  Y  L++ +S+    +        
Sbjct: 539 ISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLRE 598

Query: 608 MVKAGLVPDRETMLSLLHGLA 628
           M   G+VP+  +  S++  ++
Sbjct: 599 MKSEGIVPNDSSFCSVIEAMS 619



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 166/386 (43%), Gaps = 63/386 (16%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR-------------- 181
           +LV  +    R+ GA  ++  M S GF+  +  +N +L  +  E R              
Sbjct: 266 TLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLV 325

Query: 182 ----------------GFADFVFVYK-EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
                           G  +  F Y+ EMVK G+VP   T N L+  LF  N+IE+A   
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385

Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
            R + +KG   +S T+ IVI G   +     + ++  EM   GI+     YT +I +LCR
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCR 445

Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
            NK  EA  LF+ +    + PD +    L++  C    +D A  +L++M  + + P D  
Sbjct: 446 RNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVT 505

Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
           +  ++RGLC  GKF+E                               A+ ++ +M  R I
Sbjct: 506 YNCLMRGLCGEGKFEE-------------------------------ARELMGEMKRRGI 534

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
             D  S+N  I    +  + + A+ +   M+     P   TY+A + G  K  + E A  
Sbjct: 535 KPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEE 594

Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQ 489
           + R++ ++ +V +  S+  ++E + +
Sbjct: 595 LLREMKSEGIVPNDSSFCSVIEAMSK 620



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 204/485 (42%), Gaps = 20/485 (4%)

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
           N +    D+    H +    ++  F+ +++       VD+++     M + G   +    
Sbjct: 135 NSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETC 194

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
             I+ +L R N++E A   +  M  +++  +  T+  +IN LC+  +L  A   L  M  
Sbjct: 195 NHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMES 254

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
            G+ PT   +  +V+G    G+ + +   + +       P    +N +L   CN G+   
Sbjct: 255 FGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR--- 311

Query: 392 AKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
           A  +L +M     + D  S+NI IR    N ++  A+     MV   +VP   TY+  + 
Sbjct: 312 ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIH 371

Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
           G       E A  + R++  + +VLDS++Y+ ++ G CQ     +A  +   M  +G   
Sbjct: 372 GLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKP 431

Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG---LVKLQRAKDLL 567
           +  ++  LIY LC   K  +A  L       G          +M G      + RA  LL
Sbjct: 432 TQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLL 491

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
             + +M ++    D   Y  L++ +  + K ++       M + G+ PD  +  +L+ G 
Sbjct: 492 KEMDRMNIDP---DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 548

Query: 628 A---DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWV 684
           +   D     +V   +  L  +  +L    YN L+ GL K      A  LL  M  +G V
Sbjct: 549 SKKGDTKHAFIVRDEMLSLGFNPTLL---TYNALLKGLSKNQDGELAEELLREMKSEGIV 605

Query: 685 PDATT 689
           P+ ++
Sbjct: 606 PNDSS 610



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 190/453 (41%), Gaps = 22/453 (4%)

Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
           ++A+ R+    +IL   FD  ++    FY       C+   ++EAI  F +M+     P 
Sbjct: 145 VLAHDRLQTKSTIL---FDFMVR----FY-------CQLRMVDEAIECFYLMKEKGFDPK 190

Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
             T   +++ L    R+++A     DM  + +      F  ++  LC+ GK  ++  FL 
Sbjct: 191 TETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG 250

Query: 367 DKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
               +   P    +N L++     G+   A+ I+ +M  +    D  ++N  + W+C NE
Sbjct: 251 IMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMC-NE 309

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
              +A E+L  M    +VPD  +Y+  + G     + E A     ++  Q +V    +Y+
Sbjct: 310 G--RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYN 367

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            L+ GL    KI  A  +   + + G  L S ++NI+I G C      KA  L     + 
Sbjct: 368 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTD 427

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
           G   T  TYT ++  L +  + ++   +  +++ +G   D+     L+        +   
Sbjct: 428 GIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRA 487

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
                 M +  + PD  T   L+ GL    +       + ++       D   YN LI+G
Sbjct: 488 FSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 547

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             K+G T  A  + D ML  G+ P   T+  L+
Sbjct: 548 YSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALL 580



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 11/387 (2%)

Query: 322 RLDDANDILEDMIVIG---LTPTDDVFVDIVRGLCEVGKFDESVN--FLEDKCGY--VTS 374
           R +   D+ +++++      T +  +F  +VR  C++   DE++   +L  + G+   T 
Sbjct: 133 RKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTE 192

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM 433
             N +L       +   A      M   +I ++  ++NI I  LC+  +++KA   LG M
Sbjct: 193 TCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 252

Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
               + P   TY+  V G       E A  +  ++ ++    D  +Y+ ++  +C   + 
Sbjct: 253 ESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR- 311

Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
             A EV   M   G    S S+NILI G      ++ A   R      G   T  TY  +
Sbjct: 312 --ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTL 369

Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
           + GL    + +   +++ ++  +G  LD   Y I+I    +    K      + M+  G+
Sbjct: 370 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGI 429

Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
            P + T  SL++ L   ++         K+V      D  M N L++G    G   +A  
Sbjct: 430 KPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFS 489

Query: 674 LLDLMLGKGWVPDATTHGLLVGSSVGE 700
           LL  M      PD  T+  L+    GE
Sbjct: 490 LLKEMDRMNIDPDDVTYNCLMRGLCGE 516



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 3/266 (1%)

Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
           C+L   ++A+  F  +  +     + + + ++  L ++ +I  A   +  M +     + 
Sbjct: 167 CQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNV 226

Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
            +FNI+I  LC   K+ KA     +  S G   T  TY  ++ G     R +   +++++
Sbjct: 227 YTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISE 286

Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
           M  +G   D++ Y  ++  M  + +  +       M   GLVPD  +   L+ G ++   
Sbjct: 287 MKSKGFQPDLQTYNPILSWMCNEGRASEV---LREMKGIGLVPDSVSYNILIRGCSNNGD 343

Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
           L    +  +++V    V     YN LI+GL+ E     A  L+  +  KG V D+ T+ +
Sbjct: 344 LETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 403

Query: 693 LVGSSVGEEIDSRRFAFDSSSFPDSV 718
           ++          + FA       D +
Sbjct: 404 VINGYCQHGDAKKAFALHDEMMTDGI 429


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 246/547 (44%), Gaps = 46/547 (8%)

Query: 51  EAKIQSLRHNLSPDHLIRVLDN-TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
             ++ +L  +L    + RVL    +D  +AL  F WV      + +   YC ++  L  +
Sbjct: 133 HTEVNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWS 192

Query: 110 GNVEE-MEGLCQ--NMVKERYP--NVREALI--------------SLVFSFVNHYRVNGA 150
            N  + ++ LC+   +VK+  P  +V + LI               LV +++   RV   
Sbjct: 193 RNFSQAIKFLCELVELVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREG 252

Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLL 209
           +R    M   GF  +V   N +L  ++  K  + D  + VY+EM + GI PN+ T N L 
Sbjct: 253 LRSFRRMLRVGFVPTVITSNYLLNGLL--KLNYTDRCWEVYEEMERFGIAPNLYTFNILT 310

Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
            VL +            +M ++G  P+  T+  +I       R+DD+  +   M+  G+ 
Sbjct: 311 HVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVV 370

Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
            +L  YT ++  LC+E ++ EA +LF  M    L PD +TY  LI+  C+  ++ ++  +
Sbjct: 371 PDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSL 430

Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYVTSP--HNALLECCCN 385
           L DMI  G++P       +V G  + GKF  ++N + +  + G   S   ++ L+   C 
Sbjct: 431 LHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCR 490

Query: 386 AGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
             + F AK +LE+M+ D    + + +N  I+  C+ + I +A  L   MV   + P+ AT
Sbjct: 491 ENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLAT 550

Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE---------GLCQVEKITE 495
           Y A VJG           R+ R +  +SLV + ++   L +         G C+   I +
Sbjct: 551 YRA-VJGCLS--------RLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDK 601

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  +    +K      + SFN LI        + +++ ++ +    G      T   ++ 
Sbjct: 602 AESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVID 661

Query: 556 GLVKLQR 562
           GL K +R
Sbjct: 662 GLWKARR 668



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 178/414 (42%), Gaps = 11/414 (2%)

Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           R  ++ E +R F+ M  +  +P  +T   L+N L +    D   ++ E+M   G+ P   
Sbjct: 245 RMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLY 304

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGK----FFLAKCI 395
            F  +   LC+ G   +   FLE        P    +N L+   C  G+    F+L K +
Sbjct: 305 TFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIM 364

Query: 396 LEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
             +     + D  S+   +  LC+   +R+A++L  RMV   + PD  TY+  + G CK 
Sbjct: 365 YRRGV---VPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKE 421

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              +++  +   +    +  DS +   LVEG  +  K   A+ +   + + G S+S   +
Sbjct: 422 GKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIY 481

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           + LI  LC   +   A  L       G       Y +++    +     + L++  +M+ 
Sbjct: 482 SYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVD 541

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +    ++  Y  +J  +S  ++  +       MV +G +PD E   +L +G    + +  
Sbjct: 542 KEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDK 601

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
             S ++    + ++ D+  +N LI     +G  +++  + D+ML  G +P+  T
Sbjct: 602 AESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLT 655



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/456 (21%), Positives = 176/456 (38%), Gaps = 67/456 (14%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
           L++      R+   L  FRRM + G  P   T   ++ GL+  +  D    +  EM   G
Sbjct: 239 LVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFG 298

Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
           I   L  +  +  +LC++    +  +  + M      PD +TY  LIN  C   RLDDA 
Sbjct: 299 IAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAF 358

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAG 387
            + + M   G+ P    +  ++ GLC+ G+  E                           
Sbjct: 359 YLYKIMYRRGVVPDLVSYTALMNGLCKEGRVRE--------------------------- 391

Query: 388 KFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
               A  +  +M  R ++ D  ++N  I   C+  +++++  LL  M+ + + PD  T  
Sbjct: 392 ----AHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCW 447

Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
             V G  K   +  AL +  ++    + +    YS L+  LC+  +   A  +   MS++
Sbjct: 448 VLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQD 507

Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           G       +N LI   C    + +A+ L+            +TY  ++  L +L R+ + 
Sbjct: 508 GHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEG 567

Query: 567 LVVLAQMLVEGCALDVE-------AYC----------------------------ILIQS 591
             ++ +M+  G   D+E        YC                             LI+ 
Sbjct: 568 ESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRI 627

Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            S +  +       ++M+K GL+P+  T   ++ GL
Sbjct: 628 TSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGL 663



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 1/264 (0%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
           TY  +I      G ++E   L  +M+             LV  +    +   A+ ++V +
Sbjct: 410 TYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVEL 469

Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
              G  +S D+++ ++ A+  E R FA    + + M + G    ++  N L++   + + 
Sbjct: 470 QRFGVSISQDIYSYLIVALCRENRPFAAKNLL-ERMSQDGHKXELEIYNELIKSFCQCDC 528

Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
           I  AL     M  K   PN  T+  VJ  L   SR  +  S++GEM   G   +L     
Sbjct: 529 IAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRA 588

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           +    CREN +++A  L         + D  ++  LI        +  + +I + M+ +G
Sbjct: 589 LFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMG 648

Query: 338 LTPTDDVFVDIVRGLCEVGKFDES 361
           L P       ++ GL +  + D +
Sbjct: 649 LLPNPLTCKYVIDGLWKARRVDSA 672


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 134/587 (22%), Positives = 256/587 (43%), Gaps = 46/587 (7%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTL 205
           V  A  V   M + G + S+  FN +L       RG       +   M K+GI P+V + 
Sbjct: 199 VRAAWNVFEEMTAEGPRPSLATFNAMLLGFCH--RGMVRVASGLLGIMGKSGIAPDVCSY 256

Query: 206 NYLLE--VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
           N L++   +F  +R   A   F  MH+ GC P   T+ I++  L    R+ ++  +  EM
Sbjct: 257 NILIKGHCVFGWSR--DAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314

Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE------------ 311
             +GIQ+    +  +I    +  ++++A   ++ M+A  L+PD  T+             
Sbjct: 315 AQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYA 374

Query: 312 -------------------ELINC-LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
                              +++ C LC + RLDDA ++L   I  G+      F  ++  
Sbjct: 375 AQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAA 434

Query: 352 LCEVGKFDESVNFLE--DKCGYV--TSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
             + G  +E+       +K G    +S  N L+   CN G+   A+ +LE M  +     
Sbjct: 435 YSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS 494

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            S+ I +     +     A +    M    +  D   +SA++ G C+L    +A + F +
Sbjct: 495 TSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAE 554

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           ++++ +V ++I+Y+ ++  LC+   +TEA+++   M ++G      + NILI GLC   K
Sbjct: 555 MTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGK 614

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           +     L     S+G +  T TY  I+    + Q     +  + +MLV GC  D+  Y I
Sbjct: 615 LKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNI 674

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL-ADGSQLHLVSSGINKLVSD 646
            + S+   + L       + +V     P+  T  +L+ G+ +D     ++ +G  +L+  
Sbjct: 675 WMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSDVLDRAMILTG--RLIKM 732

Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
           +   ++   N+ ++   K+G  ++A    + +    +V D  T  ++
Sbjct: 733 AFKPNTITLNVFLSHFCKQGFGNRALMWAEKLREDSFVFDGATRNII 779



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 127/591 (21%), Positives = 241/591 (40%), Gaps = 46/591 (7%)

Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
           A+ + V   + ++G  P++  L+ LL +LF +  + +A + F  M  +G  P+  TF  +
Sbjct: 165 AEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGPRPSLATFNAM 224

Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
           + G      V  +  +LG M   GI  ++  Y  +I   C      +A ++F+ M     
Sbjct: 225 LLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHRSGC 284

Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
            P  +TY  L++ LC   R+ +A  + ++M  +G+      F  ++ G  + G+ D++  
Sbjct: 285 EPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASA 344

Query: 364 FLEDKCGYVTSPHNALLE-CCCNAGKF-FLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
              +       P +         A KF + A+ + +          D  ++ +  LC + 
Sbjct: 345 AYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDH 404

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A+ELL   +   V      ++A +    K   +E+A  ++R ++   L   S +++
Sbjct: 405 RLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFN 464

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS---------------------------- 513
            L+ GLC   ++ EA  +   M   G  LS+S                            
Sbjct: 465 YLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWDDMGNIG 524

Query: 514 ------SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
                 +F+  I GLC +  V++A +  +   S G      TY  I+  L K     + L
Sbjct: 525 LQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEAL 584

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
            ++  M   G   D+    ILI  +  + KLK        M   GL PD  T  ++++  
Sbjct: 585 KLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAY 644

Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
                ++   + +NK++      D   YNI ++ L +  + +QA  LLD ++     P++
Sbjct: 645 CRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNS 704

Query: 688 TTHGLLVGSSVGEEIDSR--------RFAFDSSSFPDSV--SDILAEGLGN 728
            T+  L+     + +D          + AF  ++   +V  S    +G GN
Sbjct: 705 VTYNTLMDGICSDVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGN 755



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 4/203 (1%)

Query: 98  TYCKMILKLGLAGNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVN 156
           TY  +I  L  AGN+ E   L QNM +    P++  + I L+       ++     +L++
Sbjct: 566 TYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNI-LIDGLCREGKLKMVDNLLLD 624

Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
           M S G       +N ++ A    +   +   F+ K M+ AG  P++ T N  +  L   +
Sbjct: 625 MCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNK-MLVAGCEPDIFTYNIWMHSLCRNH 683

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
            +  A      +    C PNS T+  ++ G I +  +D ++ + G +  +  +       
Sbjct: 684 MLNQAGKLLDELVAVDCSPNSVTYNTLMDG-ICSDVLDRAMILTGRLIKMAFKPNTITLN 742

Query: 277 CIIPMLCRENKLEEAIRLFKMMR 299
             +   C++     A+   + +R
Sbjct: 743 VFLSHFCKQGFGNRALMWAEKLR 765


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 181/406 (44%), Gaps = 39/406 (9%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR----------- 181
           A  +L+  F    R++ A RVL  M S  F      +N+++G++    +           
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 182 -----------------------GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
                                  G  + + +  EM+  G+ P++ T N ++  + +   +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
           + A +  R +  KG  P+  ++ I+++ L+   + ++   ++ +MF       +  Y+ +
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
           I  LCR+ K+EEA+ L K+M+   L PD  +Y+ LI   C   RLD A + LE MI  G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAG-KFFLAK 393
            P    +  ++  LC+ GK D+++       E  C   +S +N +     ++G K     
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
            ILE M++    D  ++N  I  LC    + +A+ELL  M      P   TY+  +LG C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
           K    EDA+ V   +       +  +Y+ L+EG+       EA+E+
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 177/398 (44%), Gaps = 5/398 (1%)

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+V   N L+    + NRI+ A     RM  K   P++ T+ I+I  L +  ++D ++ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
           L ++     Q  +  YT +I     E  ++EA++L   M +  L PD  TY  +I  +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSP 375
              +D A +++ ++ + G  P    +  ++R L   GK++E          +KC      
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
           ++ L+   C  GK   A  +L+ M ++ +  D  S++  I   C    +  A E L  M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
               +PD   Y+  +   CK    + AL +F ++       +S SY+ +   L       
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
            A+ +   M  NG      ++N +I  LC    VD+A  L     S     +  TY  ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 555 LGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM 592
           LG  K  R +D + VL  M+  GC  +   Y +LI+ +
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 222/486 (45%), Gaps = 25/486 (5%)

Query: 89  QKRFQHTA-----DTY-CKMILKLGLAGNVEEMEGLCQNMVKERY-PNVR--EALISLVF 139
           ++R QH+      DT   K+  +   +GN  E   L + MV++ Y P+V     LI   F
Sbjct: 76  ERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFF 135

Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
           +  N   +  A+RV+  +   G +  V  +N ++    +  R   D   V   M      
Sbjct: 136 TLRN---IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNR-IDDATRVLDRMRSKDFS 190

Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
           P+  T N ++  L    +++ AL    ++    C P   T+ I+I+  +    VD+++ +
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250

Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM---PDELTYEELINC 316
           + EM   G++ ++  Y  II  +C+E  ++ A   F+M+R L+L    PD ++Y  L+  
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA---FEMVRNLELKGSEPDVISYNILLRA 307

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
           L    + ++   ++  M      P    +  ++  LC  GK +E++N L+       +P 
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367

Query: 376 ---HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
              ++ L+   C  G+  +A   LE M +D  + D  ++N  +  LC+N +  +A E+ G
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
           ++      P+ ++Y+          +   AL +  ++ +  +  D I+Y+ ++  LC+  
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
            + EA E+   M       S  ++NI++ G C   +++ AI +      +G     +TYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 552 KIMLGL 557
            ++ G+
Sbjct: 548 VLIEGI 553



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 202/452 (44%), Gaps = 20/452 (4%)

Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
           +S+ +L  M   G   ++   T +I        + +A+R+ +++      PD   Y  LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165

Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCG 370
           N  C+  R+DDA  +L+ M     +P    +  ++  LC  GK D ++      L D C 
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225

Query: 371 YVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYEL 429
                +  L+E     G    A  ++++M  R +  D  ++N  IR +C+   + +A+E+
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
           +  + +    PD  +Y+  +        +E+  ++  ++ ++    + ++YS L+  LC+
Sbjct: 286 VRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
             KI EA+ +   M + G +  + S++ LI   C   ++D AI       S G       
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSM-SEQNKLKDCALFFNVM 608
           Y  ++  L K  +A   L +  ++   GC+ +  +Y  +  ++ S  +K++   +   +M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465

Query: 609 VKAGLVPDRETMLSLL-----HGLADGSQLHLVSSGINKLVSDSEVLDSSM-YNILINGL 662
              G+ PD  T  S++      G+ D +   LV       +   E   S + YNI++ G 
Sbjct: 466 SN-GIDPDEITYNSMISCLCREGMVDEAFELLVD------MRSCEFHPSVVTYNIVLLGF 518

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
            K      A  +L+ M+G G  P+ TT+ +L+
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 3/259 (1%)

Query: 110 GNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
           G  EE E L   M  E+  PNV    I L+ +     ++  AM +L  M   G       
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSI-LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           ++ ++ A   E R      F+ + M+  G +P++   N +L  L +  + + AL+ F ++
Sbjct: 371 YDPLIAAFCREGRLDVAIEFL-ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            + GC PNS ++  +   L ++     ++ ++ EM   GI  +   Y  +I  LCRE  +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +EA  L   MR+ +  P  +TY  ++   C+  R++DA ++LE M+  G  P +  +  +
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549

Query: 349 VRGLCEVGKFDESVNFLED 367
           + G+   G   E++    D
Sbjct: 550 IEGIGFAGYRAEAMELAND 568



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/370 (22%), Positives = 155/370 (41%), Gaps = 12/370 (3%)

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFL-------AKC 394
           D   + I    C  G + ES++ LE     V   +N  +  C    K F        A  
Sbjct: 89  DTQMLKIFHRSCRSGNYIESLHLLET---MVRKGYNPDVILCTKLIKGFFTLRNIPKAVR 145

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
           ++E +      D  ++N  I   C+   I  A  +L RM      PD  TY+  +   C 
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
               + AL+V  Q+ + +     I+Y+ L+E       + EA+++   M   G      +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N +I G+C    VD+A  +       G+     +Y  ++  L+   + ++   ++ +M 
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            E C  +V  Y ILI ++    K+++      +M + GL PD  +   L+       +L 
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           +    +  ++SD  + D   YN ++  L K G   QA  +   +   G  P+++++  + 
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445

Query: 695 GS--SVGEEI 702
            +  S G++I
Sbjct: 446 SALWSSGDKI 455



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 86/242 (35%), Gaps = 36/242 (14%)

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
           RQ  +QSL        K+    C+     E++ +   M + G +        LI G   +
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
           R + KA+R+  +    G                                      DV AY
Sbjct: 138 RNIPKAVRVMEILEKFGQP------------------------------------DVFAY 161

Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
             LI    + N++ D     + M      PD  T   ++  L    +L L    +N+L+S
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221

Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSR 705
           D+       Y ILI     EG   +A  L+D ML +G  PD  T+  ++     E +  R
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281

Query: 706 RF 707
            F
Sbjct: 282 AF 283


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 173/357 (48%), Gaps = 7/357 (1%)

Query: 173 LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKG 232
           L      +RG    + +Y+  +      +V + +  +  L +  +I  A++ FR M +KG
Sbjct: 62  LAVRTRRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKG 121

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P+S T+ I+I GL  +++++  VS++ EM   G    +  YT +I   C   +++ A+
Sbjct: 122 SAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAM 181

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG--LTPTDDVFVDIVR 350
            +   M    + P+ +TY  LI  LC+   ++ A  +L++M + G    P    +  ++ 
Sbjct: 182 DILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241

Query: 351 GLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA- 405
           GLC+ G F+  + FL++     C    + + AL+   C  G F  A  +L +M       
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL 301

Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
           D   +N  I  LC+  E+  A E+   MV   V PD  TY++ + G C     ++AL + 
Sbjct: 302 DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLM 361

Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
           +++ A+ +V +S++Y+ L+ G  Q ++   A+++   M  NG   +   + IL   L
Sbjct: 362 QEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 162/325 (49%), Gaps = 7/325 (2%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           Y+  I  LC++ ++ EA+ +F+ M      PD  TY  LIN LC++ +L+    ++++M 
Sbjct: 94  YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFF 390
             G +PT   +  ++ G C  G+ D +++ L++      +P    + AL++  C+ G+  
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVE 213

Query: 391 LAKCILEKMADRKIADCD---SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
            A  +L++M  R    C    ++   I  LC+        E L  M++S   P+ ATY+A
Sbjct: 214 RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTA 273

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G C+  ++ +A  +  ++ A    LD + Y+ L++GLC++ ++  A E+   M + G
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
            +    ++  LI GLC    +D+A+ L     + G    + TYT ++ G  +  R    L
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHAL 393

Query: 568 VVLAQMLVEGCALDVEAYCILIQSM 592
            ++ +M   G     + Y IL +S+
Sbjct: 394 QLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 3/316 (0%)

Query: 384 CNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
           C  G+   A  I  +M ++  A D  ++NI I  LC++ ++     L+  M      P  
Sbjct: 102 CKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTV 161

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
            TY+  + G C     + A+ +  ++  + +  ++++Y+ L++GLC   ++  A+ V   
Sbjct: 162 VTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKE 221

Query: 503 MSKNG--CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
           M   G  C  +  ++  LI+GLC     +  +        SG     +TYT ++ GL + 
Sbjct: 222 MKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQK 281

Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
               +  V+L +M+  GC LDV  Y  LI  + +  +L        +MV+ G+ PD  T 
Sbjct: 282 GSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTY 341

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            SL+ GL D   L      + ++ +   V +S  Y  LING  +   T  A  L++ M  
Sbjct: 342 TSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKS 401

Query: 681 KGWVPDATTHGLLVGS 696
            G +P    + +L  S
Sbjct: 402 NGLMPAGDIYKILFKS 417



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%)

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  +YS  + G CK     +A+ +FR++  +    DS +Y+ L+ GLC+  ++   V + 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
             M   G S +  ++  LI+G C   +VD A+ +       G +  T TYT ++ GL   
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 561 QRAKDLLVVLAQMLVEG--CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRE 618
              +  ++VL +M + G  C  +V  Y  LI  + ++   +    F + M+ +G  P+  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
           T  +L+HGL         +  +N++V+    LD  +YN LI+GL K G    A  +  LM
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 679 LGKGWVPDATTHGLLV 694
           + KG  PD  T+  L+
Sbjct: 330 VEKGVAPDVFTYTSLI 345



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 2/299 (0%)

Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           K+ + +  D  S++  I  LC+  +I +A E+   M      PD  TY+  + G CK   
Sbjct: 82  KLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQ 141

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
            E  + +  ++ A+      ++Y+ L+ G C   ++  A+++   M   G + ++ ++  
Sbjct: 142 LEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTA 201

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTS--YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
           LI GLC   +V++AI +       G        TYT+++ GL +    +  +  L +M++
Sbjct: 202 LIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMII 261

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
            GC  +   Y  LI  + ++    + A+  N MV  G   D     SL+ GL    +L  
Sbjct: 262 SGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDF 321

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
                  +V      D   Y  LI GL   GL  +A  L+  M  KG VP++ T+  L+
Sbjct: 322 AREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLI 380



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 167/389 (42%), Gaps = 46/389 (11%)

Query: 284 RENKLEEAIRLF--KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
           R   +  ++R++  K++ + D   D ++Y   IN LC+  ++ +A +I  +M   G  P 
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDT--DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPD 125

Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
              +  ++ GLC+  + +  V+ +++      SP    +  L+   C AG+   A  IL+
Sbjct: 126 SFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILD 185

Query: 398 KMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV--SSVVPDCATYSAFVLGKCK 454
           +M  R I  +  ++   I+ LC+  E+ +A  +L  M +  +   P+  TY+  + G C+
Sbjct: 186 EMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQ 245

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
              +E  +    ++       ++ +Y+ L+ GLCQ     EA  +   M   GC L    
Sbjct: 246 KGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVI 305

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LI GLC M ++D A  ++ L                                   M+
Sbjct: 306 YNSLIDGLCKMGELDFAREMQIL-----------------------------------MV 330

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
            +G A DV  Y  LIQ + +   L +       M   G+VP+  T  +L++G     +  
Sbjct: 331 EKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTD 390

Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLW 663
                +N++ S+  +    +Y IL   L+
Sbjct: 391 HALQLVNEMKSNGLMPAGDIYKILFKSLY 419



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 10/297 (3%)

Query: 76  LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
           ++ A++IF+ +  +K     + TY  +I  L     +E    L   M    +        
Sbjct: 107 IAEAMEIFREME-EKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYT 165

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIV---EEKRGFADFVFVYKE 192
           +L+  F    RV+ AM +L  M   G   +   +  ++  +    E +R     + V KE
Sbjct: 166 TLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERA----ILVLKE 221

Query: 193 MVKAG--IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           M   G    PNV T   L+  L +    E  ++    M   GC PN+ T+  +I GL   
Sbjct: 222 MKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQK 281

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
               ++  +L EM  +G +L++  Y  +I  LC+  +L+ A  +  +M    + PD  TY
Sbjct: 282 GSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTY 341

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
             LI  LC+   LD+A  ++++M   G+ P    +  ++ G  +  + D ++  + +
Sbjct: 342 TSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNE 398


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 223/514 (43%), Gaps = 32/514 (6%)

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
            + +  + G +     F  ++ A     R         +   + G  P     N +L VL
Sbjct: 126 AIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVL 185

Query: 213 FETN-RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE 271
             +   +  AL  + RM   GC PN  T+ ++I GL       D++ +  EM   GI   
Sbjct: 186 VASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPN 245

Query: 272 LSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
           +  +T ++  +C   +L+EA  L   M      PDE+TY   ++ LC+  R+D+A + LE
Sbjct: 246 VKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLE 305

Query: 332 DM-----IVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTSP----HNALLE 381
            +      V+GL      +  ++ GL   G+++E    ++E       SP    +  ++ 
Sbjct: 306 ALRHTGTFVLGL----KGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIR 361

Query: 382 CCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
            C  AG+   A    ++M ++    D   +N  ++ LC+  ++  A  L+  MV ++VV 
Sbjct: 362 GCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVL 421

Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
           D  TY+  ++G CK    ++A++VF  +         ++Y+ L++GL +  ++ EA  +F
Sbjct: 422 DIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLF 481

Query: 501 CCMS-KNGCSL------------SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
             M   N  SL             S +   L+  +C   +V KA +L      SG     
Sbjct: 482 YKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDV 541

Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV 607
            TY  ++ GL K++     L +  ++ V+G  LD   Y  LI S+   ++  D    F  
Sbjct: 542 VTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQD 601

Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
           ++ +G  P      S++  L    ++  +S  IN
Sbjct: 602 ILHSGGTPSMPIYNSMMRSLC---RMQKLSQAIN 632



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 202/493 (40%), Gaps = 91/493 (18%)

Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSG-GFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
           A  +L+F+  +  R + A+     M    G + +  V+N VL  +V         + +Y 
Sbjct: 141 AFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYN 200

Query: 192 EMVKA-----------------------------------GIVPNVDTLNYLLEVLFETN 216
            MV A                                   GI PNV T   LL  +    
Sbjct: 201 RMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAG 260

Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG-IQLELSFY 275
           +++ A +    M  KGC P+  T+   + GL    RVD+++  L  +   G   L L  Y
Sbjct: 261 QLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGY 320

Query: 276 TCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           +C+I  L    + EE  + + +++   D+ PD + Y  +I    E  R +DA    ++M 
Sbjct: 321 SCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMK 380

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----------------------------- 365
             G TP    +  +++ LC+ G  D + + +                             
Sbjct: 381 EKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVD 440

Query: 366 ----------EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM--------------AD 401
                     E  C      +N L++    A +   A+ +  KM                
Sbjct: 441 EAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGA 500

Query: 402 RKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
            ++ D ++    +  +C++ ++ KAY+LL  ++ S VVPD  TY+  + G CK+ N + A
Sbjct: 501 NQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGA 560

Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
           LR+FR++  +   LD I+Y  L++ L +  +  +A+ +F  +  +G + S   +N ++  
Sbjct: 561 LRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRS 620

Query: 522 LCVMRKVDKAIRL 534
           LC M+K+ +AI L
Sbjct: 621 LCRMQKLSQAINL 633



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 41/390 (10%)

Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-----EDKCGYVTSPHNALLEC 382
           D + D    GL P    F  ++      G+  E+V        E  C   T  +NA+L  
Sbjct: 125 DAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRV 184

Query: 383 CCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDC 442
              +G                        +P+           A  L  RMV +  +P+ 
Sbjct: 185 LVASGG----------------------AVPL-----------ALALYNRMVAAGCLPNR 211

Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
           ATY+  + G CK     DAL++F ++ ++ +  +  +++ L+  +C   ++ EA  +   
Sbjct: 212 ATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHS 271

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAI-RLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
           M   GC     ++N  + GLC   +VD+AI RL +L ++         Y+ ++ GL    
Sbjct: 272 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAG 331

Query: 562 RAKDLLVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
           R ++      ++L +   + D+  Y I+I+  +E  +  D   FF+ M + G  PD    
Sbjct: 332 RYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCY 391

Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
            +LL  L D   L    S ++++V ++ VLD   Y  +I GL KE L  +A  + D M+ 
Sbjct: 392 NTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVE 451

Query: 681 KGWVPDATTHGLLV-GSSVGEEIDSRRFAF 709
            G  P   T+ +L+ G      ++  R  F
Sbjct: 452 VGCHPSVMTYNVLIDGLYRAHRLEEARMLF 481



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 202/507 (39%), Gaps = 49/507 (9%)

Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-FDL 266
           ++ +L  T+   +  D        G  P +  FE +I    +  R  ++V     M  + 
Sbjct: 110 VVPILLATDADAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEF 169

Query: 267 GIQLELSFYTCIIPMLCREN-KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
           G +     Y  ++ +L      +  A+ L+  M A   +P+  TY  LI+ LC+     D
Sbjct: 170 GCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVD 229

Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCN 385
           A  + ++MI  G+TP                                   H  LL   CN
Sbjct: 230 ALKLFDEMISRGITPN-------------------------------VKTHTILLSSMCN 258

Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV-VSSVVPDCA 443
           AG+   A+ +L  M D+    D  ++N  +  LC+   + +A E L  +    + V    
Sbjct: 259 AGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLK 318

Query: 444 TYSAFVLGKCKLCNYEDALRVFRQVSAQSLV-LDSISYSKLVEGLCQVEKITEAVEVFCC 502
            YS  + G      YE+  + + +V  Q+ V  D + Y+ ++ G  +  +  +A   F  
Sbjct: 319 GYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDE 378

Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
           M + G +  +  +N L+  LC    +D A  L S    +       TYT +++GL K Q 
Sbjct: 379 MKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQL 438

Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC-------------ALFFNVMV 609
             + + V   M+  GC   V  Y +LI  +   ++L++              +LF  + +
Sbjct: 439 VDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTL 498

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
            A  V D ET+  L+  +    Q+      +  ++    V D   YN L+NGL K     
Sbjct: 499 GANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLD 558

Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS 696
            A  L   +  KG+  D  T+G L+ S
Sbjct: 559 GALRLFRELQVKGFPLDEITYGTLIDS 585



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/401 (21%), Positives = 175/401 (43%), Gaps = 49/401 (12%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           ++GA  ++  M      L +  +  ++  + +E+    + + V+  MV+ G  P+V T N
Sbjct: 404 LDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQL-VDEAMQVFDGMVEVGCHPSVMTYN 462

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCP--------------NSRTFEIVIKGLIANSR 252
            L++ L+  +R+E A   F +M + G  P              +S T + +++ +  + +
Sbjct: 463 VLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQ 521

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           V  +  +L  + D G+  ++  Y  ++  LC+   L+ A+RLF+ ++      DE+TY  
Sbjct: 522 VLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGT 581

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
           LI+ L    R +DA  + +D++  G TP+  ++  ++R LC + K  +++N   D   ++
Sbjct: 582 LIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFD---HL 638

Query: 373 TSPHNALL--ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
              +N L   E   +A K F   C+ E + +    D +  ++                  
Sbjct: 639 PRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSV------------------ 680

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
                     +   Y+ +++G  +    EDAL++F  +    + +       L + LC  
Sbjct: 681 ----------NSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLE 730

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
             +  AV+V     K G ++     N L+  LC+  +   A
Sbjct: 731 GNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDA 771


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 185/410 (45%), Gaps = 33/410 (8%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           F+ +L ++V+ K  +   + ++K+    G+ PN+ TLN L+        I  A   F  +
Sbjct: 96  FDNILSSLVKNKH-YLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANI 154

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
            K+G  P++ T   +IKGL     +  ++    ++   G QL+   Y  +I  LC+  + 
Sbjct: 155 LKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGET 214

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           +   RL + +    + PD + Y  +I+CLC+N R+ DA D+  +MIV G++P    +  +
Sbjct: 215 KAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTL 274

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADC 407
           + G C +G   E+ +                               +L +M  + I  D 
Sbjct: 275 IYGFCIMGNLKEAFS-------------------------------LLNEMKLKNINPDV 303

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            ++NI I  L +  +I +A  L   M   ++ P+  TY++ + G CK  + E A+ + ++
Sbjct: 304 YTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKK 363

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  Q +  D  SY+ L++ LC+  ++  A + F  +   G  L+  ++N++I GLC    
Sbjct: 364 MKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGL 423

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
               + L+S     G      T+  I+  L +          L +M+  G
Sbjct: 424 FGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 1/314 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+ C C+      A  +   +  R    D  + N  I+ LC   EI++A     ++V 
Sbjct: 132 NILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVA 191

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                D  +Y   + G CK    +   R+ R++   S+  D + Y+ ++  LC+ +++ +
Sbjct: 192 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGD 251

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A +++  M   G S +  ++N LIYG C+M  + +A  L +       +    T+  ++ 
Sbjct: 252 ACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILID 311

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
            L K  +  + + +  +M  +    ++  Y  LI  + + + L+        M + G+ P
Sbjct: 312 ALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP 371

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           D  +   LL  L  G +L         L+     L+   YN++INGL K GL      L 
Sbjct: 372 DVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLK 431

Query: 676 DLMLGKGWVPDATT 689
             M GKG +PDA T
Sbjct: 432 SKMEGKGCMPDAIT 445



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 159/365 (43%), Gaps = 15/365 (4%)

Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
           I+  L +       I LFK  ++  + P+  T   LINC C    +  A  +  +++  G
Sbjct: 99  ILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRG 158

Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGK 388
             P       +++GLC  G+   ++ F +         D+  Y T     L+   C AG+
Sbjct: 159 YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGT-----LINGLCKAGE 213

Query: 389 FFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
                 +L K+    +  D   +   I  LC+N+ +  A +L   M+V  + P+  TY+ 
Sbjct: 214 TKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNT 273

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
            + G C + N ++A  +  ++  +++  D  +++ L++ L +  KI EA+ +F  M    
Sbjct: 274 LIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKN 333

Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
              +  ++  LI GLC    +++AI L       G      +YT ++  L K  R ++  
Sbjct: 334 MFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAK 393

Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
                +LV+G  L+V  Y ++I  + +     D     + M   G +PD  T  +++  L
Sbjct: 394 QFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICAL 453

Query: 628 ADGSQ 632
            +  +
Sbjct: 454 FEKDE 458



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/399 (20%), Positives = 169/399 (42%), Gaps = 5/399 (1%)

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A+  F RM      P +  F+ ++  L+ N      +S+  +    G+   L     +I 
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C    +  A  +F  +      PD +T   LI  LC    +  A    + ++  G   
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  ++ GLC+ G+       L    G+   P    +  ++ C C   +   A  + 
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  + I+ +  ++N  I   C    +++A+ LL  M + ++ PD  T++  +    K 
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKE 316

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A+ +F ++  +++  + ++Y+ L++GLC+   +  A+ +   M + G      S+
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 376

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            IL+  LC   +++ A +        G      TY  ++ GL K     D++ + ++M  
Sbjct: 377 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 436

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLV 614
           +GC  D   +  +I ++ E+++      F   M+  GL+
Sbjct: 437 KGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 114/265 (43%)

Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
             RM++    P    +   +    K  +Y   + +F+Q  +  +  +  + + L+   C 
Sbjct: 81  FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140

Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
           +  IT A  VF  + K G    + + N LI GLC   ++ +A+       + G      +
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200

Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
           Y  ++ GL K    K +  +L ++       DV  Y  +I  + +  ++ D    ++ M+
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260

Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
             G+ P+  T  +L++G      L    S +N++   +   D   +NILI+ L KEG   
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320

Query: 670 QASYLLDLMLGKGWVPDATTHGLLV 694
           +A  L + M  K   P+  T+  L+
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLI 345



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 138/332 (41%), Gaps = 13/332 (3%)

Query: 44  SHQTTDYEAKIQSLRHNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADT 98
           +H T  +      L+    PD      LI+ L    ++  AL     V  Q  FQ    +
Sbjct: 142 AHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQG-FQLDQVS 200

Query: 99  YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
           Y  +I  L  AG  + +  L + +             +++     + RV  A  +   M 
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260

Query: 159 SGGFKLSVDVFNVVLGAIV---EEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
             G   +V  +N ++         K  F+    +  EM    I P+V T N L++ L + 
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFS----LLNEMKLKNINPDVYTFNILIDALGKE 316

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
            +I+ A+  F  M  K   PN  T+  +I GL  N  ++ ++++  +M + GIQ ++  Y
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 376

Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
           T ++  LC+  +LE A + F+ +       +  TY  +IN LC+     D  D+   M  
Sbjct: 377 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 436

Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            G  P    F  I+  L E  + D++  FL +
Sbjct: 437 KGCMPDAITFKTIICALFEKDENDKAEKFLRE 468



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 21/250 (8%)

Query: 89  QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVN 148
            KR     D Y +MI+K G++ NV     L          N++EA     FS +N  +  
Sbjct: 246 NKRVGDACDLYSEMIVK-GISPNVFTYNTLIYGFC--IMGNLKEA-----FSLLNEMK-- 295

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
                L N+N       V  FN+++ A+ +E +   + + +++EM    + PN+ T   L
Sbjct: 296 -----LKNINP-----DVYTFNILIDALGKEGK-IDEAISLFEEMKHKNMFPNIVTYTSL 344

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           ++ L + + +E A+   ++M ++G  P+  ++ I++  L    R++++      +   G 
Sbjct: 345 IDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGY 404

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
            L +  Y  +I  LC+     + + L   M     MPD +T++ +I  L E    D A  
Sbjct: 405 HLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEK 464

Query: 329 ILEDMIVIGL 338
            L +MI  GL
Sbjct: 465 FLREMIARGL 474


>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 183/386 (47%), Gaps = 7/386 (1%)

Query: 62  SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           SP  + +++ + +D   A +IF   S+Q  F+H+  ++  +ILKLG A     M+ L   
Sbjct: 13  SPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMR 72

Query: 122 MVKERYPNVREALISLVFSFVNHYRV-NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           +  E+Y ++  +L S +        + + A++   +M     K      N +L  +V  +
Sbjct: 73  LKSEQY-SINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHR 131

Query: 181 RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
                   ++K   + G+ P+  + N L+        +  A   F +M K+   P+  ++
Sbjct: 132 NYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESY 191

Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
            I+++GL   S+V+ +V +L +M + G   +   YT ++  LCR+ KL+EA +L   M+ 
Sbjct: 192 RILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKV 251

Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
               PD + Y  +I   C   R  DA  +LEDM   G +P    +  +V GLC+ G +DE
Sbjct: 252 KGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDE 311

Query: 361 SVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIR 415
           + N++E+      SPH    +AL+   CN GK   A  +L +M     A   ++W   I 
Sbjct: 312 AKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIP 371

Query: 416 WLCENEEIRKAYELLGRMVVSSVVPD 441
            +CE +++ +   +    +   + P+
Sbjct: 372 RICEVDKLVRMENIFDEXLKLEITPN 397



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 1/245 (0%)

Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLG 431
           T  +N L+   C  G   +A  +  +M  R +A D +S+ I ++ LC   ++ +A +LL 
Sbjct: 153 TKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLE 212

Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
            M+    VPD  +Y+  +   C+    ++A ++  ++  +    D + Y+ ++ G C+  
Sbjct: 213 DMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREG 272

Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
           +  +A +V   M  NGCS +  S+  L+ GLC     D+A        S G S   S + 
Sbjct: 273 RXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFH 332

Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
            ++ G   + + ++   VL +ML  G A   E +  +I  + E +KL      F+  +K 
Sbjct: 333 ALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLKL 392

Query: 612 GLVPD 616
            + P+
Sbjct: 393 EITPN 397



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 6/287 (2%)

Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---H-NALLECCCNAGKFFLAKCILEKM 399
           +F DI+    E    D+++        + + P   H N LL+   +   +      L K 
Sbjct: 84  LFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFDLFKS 143

Query: 400 ADRK--IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
           A R     D  S+NI +   C N ++  AY L  +M    V PD  +Y   + G C+   
Sbjct: 144 AHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQ 203

Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
              A+ +   +  +  V D++SY+ L+  LC+ +K+ EA ++ C M   GC+     +N 
Sbjct: 204 VNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNT 263

Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
           +I G C   +   A ++     S+G S    +Y  ++ GL       +    + +ML +G
Sbjct: 264 VILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKG 323

Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLL 624
            +     +  LI       KL++       M++ G     ET ++++
Sbjct: 324 FSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAII 370



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 102/237 (43%)

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           IR A++L        V PD  +Y+  +   C   +   A  +F Q+  + +  D  SY  
Sbjct: 134 IRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRI 193

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L++GLC+  ++  AV++   M   G    + S+  L+  LC  +K+ +A +L       G
Sbjct: 194 LMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKG 253

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA 602
            +     Y  ++LG  +  R  D   VL  M   GC+ ++ +Y  L+  + +Q    +  
Sbjct: 254 CNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAK 313

Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
            +   M+  G  P      +L++G  +  +L      + +++   E   +  +  +I
Sbjct: 314 NYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAII 370



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 89/203 (43%)

Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
           ++M+  G VP+  +   LL  L    +++ A     RM  KGC P+   +  VI G    
Sbjct: 212 EDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCRE 271

Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
            R  D+  +L +M   G    L  Y  ++  LC +   +EA    + M +    P    +
Sbjct: 272 GRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVF 331

Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
             LIN  C   +L++A ++L +M+  G     + +V I+  +CEV K     N  ++   
Sbjct: 332 HALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLK 391

Query: 371 YVTSPHNALLECCCNAGKFFLAK 393
              +P+  L+E      ++ + K
Sbjct: 392 LEITPNTRLVEAGIGLEEYVIRK 414



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 1/227 (0%)

Query: 457 NY-EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           NY   A  +F+      +  D+ SY+ L+   C    ++ A  +F  M K   +    S+
Sbjct: 132 NYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESY 191

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
            IL+ GLC   +V++A+ L     + G      +YT ++  L + ++ K+   +L +M V
Sbjct: 192 RILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKV 251

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
           +GC  D+  Y  +I     + +  D       M   G  P+  +  +L+ GL D      
Sbjct: 252 KGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDE 311

Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
             + + +++S       S+++ LING    G   +A  +L  ML  G
Sbjct: 312 AKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHG 358



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 9/191 (4%)

Query: 511 SSSSFNILIYGLCVMRKV----DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
           S SSF+ILI  L   R+     D  +RL+S  YS       S ++ I+    +       
Sbjct: 46  SYSSFHILILKLGWARQFSLMQDLLMRLKSEQYS----INPSLFSDIIEIYGEANLPDQA 101

Query: 567 LVVLAQML-VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
           L     ML      L      +L   +S +N ++     F    + G+ PD ++   L+ 
Sbjct: 102 LKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMS 161

Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
                  L +  +  N++       D   Y IL+ GL ++   ++A  LL+ ML KG+VP
Sbjct: 162 AFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVP 221

Query: 686 DATTHGLLVGS 696
           DA ++  L+ S
Sbjct: 222 DALSYTTLLNS 232



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%)

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G + D ++Y IL+ +      L      FN M K  + PD E+   L+ GL   SQ++  
Sbjct: 148 GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRA 207

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
              +  +++   V D+  Y  L+N L ++    +A  LL  M  KG  PD   +  ++
Sbjct: 208 VDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVI 265


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/478 (22%), Positives = 208/478 (43%), Gaps = 11/478 (2%)

Query: 61  LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
           L P  L   +++  +   +L+ F W+S Q  F   + +   +   L  AG     +    
Sbjct: 125 LDPTFLSHFVEHQKNALISLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLD 184

Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           +      P   EA I  +        V  A+ V   +   G   S+  +N VL   V  +
Sbjct: 185 STNFNPKPASLEAYIRCL---CKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSV--R 239

Query: 181 RGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            G  DFV+ +Y EMV++ +V +V T+ YL++   + NRI    +  RR+ + G  P +  
Sbjct: 240 AGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAA 299

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           F  +I G   +        +L  M       ++  Y  ++  LC+  K  E  R+FK ++
Sbjct: 300 FNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLK 359

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                PD + Y  +I+ LC    L DA  +  +MI  G  P +  +  ++ G  ++G  +
Sbjct: 360 DRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLE 419

Query: 360 ESVNFLEDKC----GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
           E+     + C    G  T  +N +++  C+ GK   A  + E+M+ + I  +  ++N  +
Sbjct: 420 EAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALV 479

Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
           R  C+  +I +   LL  ++   + P  A+Y+  +   C+  + ++A  ++  +  + + 
Sbjct: 480 RGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGME 539

Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
               ++  ++ G C+     E +E    M ++       SF  LI  L  + ++D A+
Sbjct: 540 PAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDAL 597



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/461 (20%), Positives = 200/461 (43%), Gaps = 14/461 (3%)

Query: 176 IVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET---NRIESALDQFRRMHKKG 232
           +  +K       F +    ++G  P+  + N L + L E    N  +S LD         
Sbjct: 134 VEHQKNALISLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDS------TN 187

Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAI 292
             P   + E  I+ L     V++++S+ G++  +G+   ++ +  ++    R  +++   
Sbjct: 188 FNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVW 247

Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
            L+  M    ++ D  T   L+   C+  R+ D +++L  ++  G+ P +  F  ++ G 
Sbjct: 248 ELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGF 307

Query: 353 CEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
           C+   +    + L        +P    +  ++   C  GK      + + + DR  A D 
Sbjct: 308 CKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDR 367

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
             +   I  LC  + +  A +L   M+    +P+  TY+A + G  K+ N E+A +++R+
Sbjct: 368 VMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYRE 427

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           +  +     ++SY+ +++GLC   KI EA ++F  MS  G   +  ++N L+ G C   K
Sbjct: 428 MCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGK 487

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           + +   L       G   + ++Y  ++  L +    ++  ++   M   G    V  +  
Sbjct: 488 IVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDF 547

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
           +I    +Q    +   +   M+++ L P +++  SL+  L+
Sbjct: 548 MITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLS 588



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 191/458 (41%), Gaps = 9/458 (1%)

Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           GF       NV+  A+VE     A   F    +      P   +L   +  L +   +E 
Sbjct: 155 GFSPDSSSCNVLFDALVEAGACNAAKSF----LDSTNFNPKPASLEAYIRCLCKGGLVEE 210

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
           A+  F ++   G C +  T+  V++G +   R+D    + GEM +  +  ++     ++ 
Sbjct: 211 AISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQ 270

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
             C EN++ +   L + +    ++P    + +LI+  C++      +D+L  MI     P
Sbjct: 271 AFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAP 330

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               + ++V GLC+ GK  E     +D      +P    +  ++   C       A+ + 
Sbjct: 331 DIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLW 390

Query: 397 EKMADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
            +M  +     + ++N  I    +   + +A+++   M          +Y+  + G C  
Sbjct: 391 FEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSH 450

Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
              ++A  +F ++S + ++ + I+Y+ LV G C+  KI E   +   +   G   S++S+
Sbjct: 451 GKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASY 510

Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
             LI  LC    +  A  L     + G      T+  ++ G  K   A + +  L  ML 
Sbjct: 511 APLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLR 570

Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
                  +++  LIQ +S+ ++L D  L  + M+K G 
Sbjct: 571 SKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGF 608



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/390 (20%), Positives = 158/390 (40%), Gaps = 30/390 (7%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           P   + E  I CLC+   +++A  +   +  IG+  +   +  ++RG    G+ D     
Sbjct: 190 PKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRID----- 244

Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIR 424
                                    F+ +   E +    +AD  +    ++  C+   I 
Sbjct: 245 -------------------------FVWELYGEMVESSVVADVHTVGYLVQAFCDENRIS 279

Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
             + LL R++   VVP  A ++  + G CK   Y     +   + A++   D  +Y ++V
Sbjct: 280 DGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVV 339

Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
            GLC+  K  E   VF  +   G +     +  +I+GLC M+ +  A +L       G  
Sbjct: 340 NGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFL 399

Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
               TY  ++ G  K+   ++   +  +M  +G      +Y ++I+ +    K+K+    
Sbjct: 400 PNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDL 459

Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
           F  M   G++ +  T  +L+ G     ++   ++ + +L+       ++ Y  LI+ L +
Sbjct: 460 FEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQ 519

Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           EG    A  L D M  +G  P   TH  ++
Sbjct: 520 EGDMQNAKILWDDMQNRGMEPAVCTHDFMI 549


>gi|357506233|ref|XP_003623405.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498420|gb|AES79623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 737

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/537 (23%), Positives = 233/537 (43%), Gaps = 13/537 (2%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEM-VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           N++L  ++  K  F  +  V   + +KAG VP++   N L++     +R   A   F  M
Sbjct: 77  NLLLAKLLRSKTPFQTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDM 136

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             +G CPN  ++  +I G  +   + D++ +  EM + G++     Y+ +I    R    
Sbjct: 137 KNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDF 196

Query: 289 EEAIRLFKMMRALDLMPDELT-----YEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
           E    L   +     M DEL+     +  LI+ LC+    ++  +I E M      P   
Sbjct: 197 ESGRELMCKLWERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQV 256

Query: 344 VFVDIVRGLCEVGKFDESVN--FLEDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKM 399
           V+  ++   C+VG++  +    +L  K  +V S   +N ++      G       +LE+ 
Sbjct: 257 VYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEG 316

Query: 400 ADRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
           A+   + C+ ++ + +  LC   ++ KA E+L  M+    V     Y+ ++   C + N 
Sbjct: 317 AEFGFSLCEHTYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNP 376

Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS-KNGCSLSSSSFNI 517
            + L V   +       D I+ + ++ G C++ +  EA++V   M     C+    +F  
Sbjct: 377 TELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTT 436

Query: 518 LIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
           LI GL    KVD+A+ L   +   +G      TY  ++  L KL+R  D   V   M  +
Sbjct: 437 LISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGD 496

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
           G   D   Y ++++ + E +++++   F+  ++    + D     ++L GL    + +  
Sbjct: 497 GITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEA 556

Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
              + +LV      +   YNILIN     GL  +   ++  M   G  PD  T  +L
Sbjct: 557 CHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQIVREMNKNGVAPDCVTWRIL 613



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 55/347 (15%)

Query: 161 GFKLSVDVFNVVLGAI-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
           GF L    + V++ A+     V++ R     + +YKE V    + N+      L  L   
Sbjct: 320 GFSLCEHTYKVLVEALCRVLDVDKAREVLKLM-LYKEGVDKTRIYNI-----YLRALCHV 373

Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG--IQLELS 273
           N     L+    M +  C  +  T   VI G     R D+++ +L +M  LG     ++ 
Sbjct: 374 NNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDML-LGKFCAPDVV 432

Query: 274 FYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
            +T +I  L    K++EA+ LF ++M    L P  +TY  LI CL +  R +DA ++  +
Sbjct: 433 TFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNN 492

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN-----ALLECCCNAG 387
           M   G+TP    +  IV GLCE  + +E+ +F +    + +  H+     A+L+  C++G
Sbjct: 493 MAGDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVI-WPSGIHDNFVYAAILKGLCSSG 551

Query: 388 KFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
           KF                              NE     YEL    V S + P+  +Y+ 
Sbjct: 552 KF------------------------------NEACHFLYEL----VDSGISPNIYSYNI 577

Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
            +   C L    +  ++ R+++   +  D +++  L +   +V K T
Sbjct: 578 LINCACNLGLKREVYQIVREMNKNGVAPDCVTWRILHKLQSKVTKHT 624



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 91/426 (21%), Positives = 167/426 (39%), Gaps = 26/426 (6%)

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD----VFVDIVRGLCEV 355
           +L   P + T   +++ LC + R ++A+      +  G  P       +   ++R     
Sbjct: 31  SLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPF 90

Query: 356 GKFDESVNFLEDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADR-KIADCDSWNI 412
             +    + ++ K G+V S   +N L++  C   + F A  +   M +R    +  S+  
Sbjct: 91  QTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTT 150

Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF-----RQ 467
            I   C    IR A ++   M+ S + P+  TYS  + G  +  ++E    +      R 
Sbjct: 151 LINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERM 210

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
                L ++  +++ L++ LC+     E  E+   M           +  +I   C + +
Sbjct: 211 KMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGR 270

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEA 584
              A R+  L        +  +Y  I+ GL K     R   LL   A+    G +L    
Sbjct: 271 YHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEF---GFSLCEHT 327

Query: 585 YCILIQSMSEQNKLKDCALFFNVMV-KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKL 643
           Y +L++++     +        +M+ K G+   R   + L       +   L++  +  L
Sbjct: 328 YKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFML 387

Query: 644 VSDSEVLDSSMYNILINGLWKEGLTSQASYLL-DLMLGKGWVPDATTH-----GLLVGSS 697
            S  +  D    N +ING  K G   +A  +L D++LGK   PD  T      GLL    
Sbjct: 388 ESHCQT-DVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEK 446

Query: 698 VGEEID 703
           V E +D
Sbjct: 447 VDEALD 452



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 100/252 (39%), Gaps = 9/252 (3%)

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
           Q S+ S      + S ++  LC   +  EA + F     +G      + N+L+  L   +
Sbjct: 28  QFSSLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSK 87

Query: 527 KVDKAIRL-RSL-AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
              +   L +SL    +G   +   Y ++M     + R  D   +   M   G   +V +
Sbjct: 88  TPFQTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVS 147

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y  LI        ++D    F+ M+++GL P+  T   L+ G   G         + KL 
Sbjct: 148 YTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLW 207

Query: 645 SDSEVLDSSMYNI-----LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--S 697
              ++ D    N+     LI+ L KEG  ++   + +LM     +P+   +G ++ S   
Sbjct: 208 ERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCK 267

Query: 698 VGEEIDSRRFAF 709
           VG    + R  +
Sbjct: 268 VGRYHGAARIVY 279


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 207/460 (45%), Gaps = 15/460 (3%)

Query: 132 EALISLVFSFVNHYRVNG----AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
           EA  +   + V+ Y   G    A RV+  M +     S    N ++ A+ E  R  AD +
Sbjct: 125 EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGR-VADAL 183

Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
            V   M+  G  P+V T N LL+   +      AL+    M  +GC PN+ T+ ++I  +
Sbjct: 184 VVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAM 243

Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
                VD +  +L  +   G +     Y  ++   C   +  +A  +   M   +  P+E
Sbjct: 244 CREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNE 303

Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
            T   +IN LC    L      LE M   G T     +  ++ G+CE G  D ++  L +
Sbjct: 304 ATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSN 363

Query: 368 KCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA-DRKIADCDSWNIPIRWLCENEE 422
              +   P    +N +L+  C+A ++  A+ ++ KM+ + ++ D  ++N  I + C+   
Sbjct: 364 MQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGL 423

Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSK 482
           I +A+E+  +M      P+  TYS  + G  K    E AL +  +++ +    D + Y  
Sbjct: 424 ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRV 482

Query: 483 LVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSG 542
           L E L + +KI E V+V   +  +G S  +  +N ++ GLC   K D AI + +   S G
Sbjct: 483 LTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCG 542

Query: 543 TSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
                STY  ++ GL     +K+   +L+++    C+ DV
Sbjct: 543 CMPDESTYIILIEGLFYEGYSKEARELLSRL----CSRDV 578



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 192/438 (43%), Gaps = 41/438 (9%)

Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
           +I  L    RV D++ +L  M   G   ++  Y  ++   C+     +A+ L   MRA  
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG 228

Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
             P+ +TY  +I+ +C    +D A ++L  +   G  P    +  +++G C + ++ ++ 
Sbjct: 229 CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDAD 288

Query: 363 NFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWL 417
             L++     C    +  N ++   C  G        LEKM+     A+  ++N  I  +
Sbjct: 289 EILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348

Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
           CE   +  A ELL  M      PD  TY+  + G C    +EDA  +  ++S    + D+
Sbjct: 349 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
            +++ ++   CQ   I +A EVF  M + GC+ +S+                        
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNST------------------------ 444

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
                      TY+ I+ GL K  + +  L +L +M  +G   D + Y +L +S+++++K
Sbjct: 445 -----------TYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNKEDK 492

Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
           +++     + +  +G+ P      ++L GL    +       +  +VS   + D S Y I
Sbjct: 493 IEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYII 552

Query: 658 LINGLWKEGLTSQASYLL 675
           LI GL+ EG + +A  LL
Sbjct: 553 LIEGLFYEGYSKEARELL 570



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/465 (21%), Positives = 185/465 (39%), Gaps = 79/465 (16%)

Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
           PD      L+  LC   R  DA  ++E     G   T   +  +V G C  G  +++   
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 365 LEDKCGYVTS----PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCE 419
           +     +V +     HN L+   C  G+   A  +L+ M  R  A D  ++NI ++  C+
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
               R+A EL+  M      P+  TY+  +   C+  + + A  +   + ++    ++++
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 480 YSKLVEGLCQVEKITEAVEVF-------CC----------------------------MS 504
           Y+ +++G C +E+  +A E+        C                             MS
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR-- 562
           K+GC+ +  ++N +I G+C    VD A+ L S   S G      TY  ++ GL    R  
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 563 -AKDLLV--------------------------------VLAQMLVEGCALDVEAYCILI 589
            A++L++                                V  QM  +GC  +   Y  +I
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 450

Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
             +++  K++      N M   G   D+   + L   L    ++  V   ++KL      
Sbjct: 451 GGLTKAGKMEQALELLNEMANKGFNTDKMYRV-LTESLNKEDKIEEVVQVVHKLQDSGIS 509

Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
             + +YN ++ GL + G T  A  +L  M+  G +PD +T+ +L+
Sbjct: 510 PQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILI 554


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 204/479 (42%), Gaps = 44/479 (9%)

Query: 221 ALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYT 276
           A++ F RM     C  + ++F  V+  +I       +      +F     G Q  L  Y 
Sbjct: 143 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 202

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            II  LC+  +++ A+  F+ M   +  PD  TY  L+N LC+  R+D+A  +L++M   
Sbjct: 203 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 262

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G  P    F  ++  L + G    +   +++                      FL  C+ 
Sbjct: 263 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDN---------------------MFLKGCVP 301

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            ++         ++N  I  LC   ++ KA  LL +MV S  VP+  TY   + G  K  
Sbjct: 302 NEV---------TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQR 352

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ED + +   +  +    +   YS L+ GL +  K   AV ++  M++ GC  +   + 
Sbjct: 353 RAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYG 412

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
             I GLC   K D+A  +     S G      TY+ +M G  K   ++  ++V  +M+ +
Sbjct: 413 AFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ 472

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD-GSQLHL 635
               +V    +L+  + E  +L++    +  M+  GL PD     S++ GL D GS    
Sbjct: 473 DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS---- 528

Query: 636 VSSGIN-----KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           V  G+      +        D   YNIL N L ++   ++A  LL+ ML +G  PD+ T
Sbjct: 529 VDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 587



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/543 (23%), Positives = 236/543 (43%), Gaps = 53/543 (9%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWV--SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           + ++ V+    D S A K +  V  +  K FQ    TY  +I  L   G ++      + 
Sbjct: 164 NSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFRE 223

Query: 122 M-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           M +K   P+V     +L+       RV+ A+ +L  M + G   +   FNV++ A+   K
Sbjct: 224 MPLKNCNPDVF-TYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDAL--SK 280

Query: 181 RG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            G  +    +   M   G VPN  T N L+  L    +++ AL    +M    C PN  T
Sbjct: 281 NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 340

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  +I GL+   R +D V IL  M + G +     Y+ +I  L +E K E A+RL+K M 
Sbjct: 341 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 400

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                P+ + Y   I+ LC + + D+A DIL++M+  G  P    +  +++G  + G   
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 460

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
           +++   ++        HN +   CC+                          + +  LCE
Sbjct: 461 KAILVWKEMMSQDMR-HNVV---CCS--------------------------VLLNGLCE 490

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV--LDS 477
           +  +R+A  +   M+   + PD   YS+ + G C + + +  L++F ++  Q      D 
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L   LC+ + +T A+++   M   GC   S + NI +          + +R R  
Sbjct: 551 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL----------ETLRERIN 600

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G  +      ++++ L+K +R    L ++ +ML+     +   +  +IQ   +  +
Sbjct: 601 PPQDGRLF----LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKR 656

Query: 598 LKD 600
           +++
Sbjct: 657 IRE 659



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 171/372 (45%), Gaps = 9/372 (2%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
           T+  LI     +      + +L+ M   G   T+ +F+ I +   +     E+VNF    
Sbjct: 91  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 150

Query: 368 ----KCGYVTSPHNALLECCCNAGKFFLA-KCILEKM-ADRKIADCD--SWNIPIRWLCE 419
                C       N++L      G F  A K  L    A+ K    +  ++N+ I+ LC+
Sbjct: 151 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 210

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             +I +A +    M + +  PD  TYS  + G CK    ++A+ +  ++ A+  + + ++
Sbjct: 211 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVT 270

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           ++ L++ L +   ++ A ++   M   GC  +  ++N LI+GLC+  K+DKA+ L     
Sbjct: 271 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 330

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           SS       TY  I+ GLVK +RA+D + +L  M   G   +   Y  LI  + ++ K +
Sbjct: 331 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 390

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    +  M + G  P+     + + GL    +       + +++S   + ++  Y+ L+
Sbjct: 391 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 450

Query: 660 NGLWKEGLTSQA 671
            G +K+G + +A
Sbjct: 451 KGFFKKGDSQKA 462



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 24/255 (9%)

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ +++ LC++ +I  AV+ F  M    C+    +++ L+ GLC  R+VD+A+ L   
Sbjct: 199 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 258

Query: 538 AYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             + G      T+  ++  L K   L RA  L+     M ++GC  +   Y  LI  +  
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV---DNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE---VLD 651
           + KL         MV +  VP++ T  ++++GL    +      G++ L+S  E     +
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRR---AEDGVHILMSMEERGQKAN 372

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDS 711
             +Y+ LI+GL+KEG +  A  L   M  KG  P+   +G  +     +E          
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK--------- 423

Query: 712 SSFPDSVSDILAEGL 726
              PD   DIL E L
Sbjct: 424 ---PDEAEDILQEML 435



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 36/205 (17%)

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           + VF   SK G   +  ++N++I  LC + ++D+A+           +    TY+ +M G
Sbjct: 184 LHVFGANSK-GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 242

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K +R  + + +L +M  EGC  +   + +LI ++S+   L   A   + M   G VP+
Sbjct: 243 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPN 302

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T                                   YN LI+GL  +G   +A  LL+
Sbjct: 303 EVT-----------------------------------YNTLIHGLCLKGKLDKALSLLE 327

Query: 677 LMLGKGWVPDATTHGLLVGSSVGEE 701
            M+    VP+  T+G ++   V + 
Sbjct: 328 KMVSSKCVPNQVTYGTIINGLVKQR 352



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/391 (18%), Positives = 149/391 (38%), Gaps = 95/391 (24%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L    DLS A K+   + ++    +   TY  +I  L L G +++   L + MV  
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEV-TYNTLIHGLCLKGKLDKALSLLEKMVSS 332

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           +    +    +++   V   R    + +L++M   G K +  +++ ++  + +E +   +
Sbjct: 333 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS-EN 391

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE---- 241
            V ++KEM + G  PNV      ++ L    + + A D  + M  KG  PN+ T+     
Sbjct: 392 AVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMK 451

Query: 242 -------------------------------IVIKGLIANSRVDDSVSILGEMFDLGIQL 270
                                          +++ GL  + R+ +++++   M   G++ 
Sbjct: 452 GFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 511

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL--MPDELTYEELINCLCE--------- 319
           ++  Y+ +I  LC    +++ ++LF  M+  +    PD +TY  L N LC          
Sbjct: 512 DVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAID 571

Query: 320 --NLRLDDAND---------------------------------------------ILED 332
             N  LD+  D                                             I+E+
Sbjct: 572 LLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEE 631

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           M++  L P    +  +++  C+  +  E+++
Sbjct: 632 MLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 207/480 (43%), Gaps = 46/480 (9%)

Query: 221 ALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYT 276
           A++ F RM     C  + ++F  V+  +I       +      +F     G Q  L  Y 
Sbjct: 119 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 178

Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
            II  LC+  +++ A+  F+ M   +  PD  TY  L+N LC+  R+D+A  +L++M   
Sbjct: 179 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 238

Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
           G  P    F  ++  L + G    +   +++                      FL  C+ 
Sbjct: 239 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDN---------------------MFLKGCVP 277

Query: 397 EKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLC 456
            ++         ++N  I  LC   ++ KA  LL +MV S  VP+  TY   + G  K  
Sbjct: 278 NEV---------TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQR 328

Query: 457 NYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFN 516
             ED + +   +  +    +   YS L+ GL +  K   AV ++  M++ GC  +   + 
Sbjct: 329 RAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYG 388

Query: 517 ILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
             I GLC   K D+A  +     S G      TY+ +M G  K   ++  ++V  +M+ +
Sbjct: 389 AFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ 448

Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD-GSQLHL 635
               +V    +L+  + E  +L++    +  M+  GL PD     S++ GL D GS    
Sbjct: 449 DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS---- 504

Query: 636 VSSGINKLVSDSEV------LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
           V  G+ KL  + +        D   YNIL N L ++   ++A  LL+ ML +G  PD+ T
Sbjct: 505 VDKGL-KLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 563



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/543 (23%), Positives = 236/543 (43%), Gaps = 53/543 (9%)

Query: 64  DHLIRVLDNTNDLSSALKIFKWV--SIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQN 121
           + ++ V+    D S A K +  V  +  K FQ    TY  +I  L   G ++      + 
Sbjct: 140 NSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFRE 199

Query: 122 M-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
           M +K   P+V     +L+       RV+ A+ +L  M + G   +   FNV++ A+   K
Sbjct: 200 MPLKNCNPDVF-TYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDAL--SK 256

Query: 181 RG-FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
            G  +    +   M   G VPN  T N L+  L    +++ AL    +M    C PN  T
Sbjct: 257 NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 316

Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
           +  +I GL+   R +D V IL  M + G +     Y+ +I  L +E K E A+RL+K M 
Sbjct: 317 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 376

Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
                P+ + Y   I+ LC + + D+A DIL++M+  G  P    +  +++G  + G   
Sbjct: 377 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 436

Query: 360 ESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE 419
           +++   ++        HN +   CC+                          + +  LCE
Sbjct: 437 KAILVWKEMMSQDMR-HNVV---CCS--------------------------VLLNGLCE 466

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV--LDS 477
           +  +R+A  +   M+   + PD   YS+ + G C + + +  L++F ++  Q      D 
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ L   LC+ + +T A+++   M   GC   S + NI +          + +R R  
Sbjct: 527 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL----------ETLRERIN 576

Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
               G  +      ++++ L+K +R    L ++ +ML+     +   +  +IQ   +  +
Sbjct: 577 PPQDGRLF----LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKR 632

Query: 598 LKD 600
           +++
Sbjct: 633 IRE 635



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 171/372 (45%), Gaps = 9/372 (2%)

Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
           T+  LI     +      + +L+ M   G   T+ +F+ I +   +     E+VNF    
Sbjct: 67  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 126

Query: 368 ----KCGYVTSPHNALLECCCNAGKFFLA-KCILEKM-ADRKIADCD--SWNIPIRWLCE 419
                C       N++L      G F  A K  L    A+ K    +  ++N+ I+ LC+
Sbjct: 127 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 186

Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
             +I +A +    M + +  PD  TYS  + G CK    ++A+ +  ++ A+  + + ++
Sbjct: 187 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVT 246

Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
           ++ L++ L +   ++ A ++   M   GC  +  ++N LI+GLC+  K+DKA+ L     
Sbjct: 247 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 306

Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           SS       TY  I+ GLVK +RA+D + +L  M   G   +   Y  LI  + ++ K +
Sbjct: 307 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 366

Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
           +    +  M + G  P+     + + GL    +       + +++S   + ++  Y+ L+
Sbjct: 367 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 426

Query: 660 NGLWKEGLTSQA 671
            G +K+G + +A
Sbjct: 427 KGFFKKGDSQKA 438



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 24/255 (9%)

Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
           ++Y+ +++ LC++ +I  AV+ F  M    C+    +++ L+ GLC  R+VD+A+ L   
Sbjct: 175 LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDE 234

Query: 538 AYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
             + G      T+  ++  L K   L RA  L+     M ++GC  +   Y  LI  +  
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV---DNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE---VLD 651
           + KL         MV +  VP++ T  ++++GL    +      G++ L+S  E     +
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRR---AEDGVHILMSMEERGQKAN 348

Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDS 711
             +Y+ LI+GL+KEG +  A  L   M  KG  P+   +G  +     +E          
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK--------- 399

Query: 712 SSFPDSVSDILAEGL 726
              PD   DIL E L
Sbjct: 400 ---PDEAEDILQEML 411



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 36/204 (17%)

Query: 497 VEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG 556
           + VF   SK G   +  ++N++I  LC + ++D+A+           +    TY+ +M G
Sbjct: 160 LHVFGANSK-GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 218

Query: 557 LVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
           L K +R  + + +L +M  EGC  +   + +LI ++S+   L   A   + M   G VP+
Sbjct: 219 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPN 278

Query: 617 RETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLD 676
             T                                   YN LI+GL  +G   +A  LL+
Sbjct: 279 EVT-----------------------------------YNTLIHGLCLKGKLDKALSLLE 303

Query: 677 LMLGKGWVPDATTHGLLVGSSVGE 700
            M+    VP+  T+G ++   V +
Sbjct: 304 KMVSSKCVPNQVTYGTIINGLVKQ 327



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/391 (18%), Positives = 149/391 (38%), Gaps = 95/391 (24%)

Query: 66  LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
           LI  L    DLS A K+   + ++    +   TY  +I  L L G +++   L + MV  
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEV-TYNTLIHGLCLKGKLDKALSLLEKMVSS 308

Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFAD 185
           +    +    +++   V   R    + +L++M   G K +  +++ ++  + +E +   +
Sbjct: 309 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS-EN 367

Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE---- 241
            V ++KEM + G  PNV      ++ L    + + A D  + M  KG  PN+ T+     
Sbjct: 368 AVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMK 427

Query: 242 -------------------------------IVIKGLIANSRVDDSVSILGEMFDLGIQL 270
                                          +++ GL  + R+ +++++   M   G++ 
Sbjct: 428 GFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 487

Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL--MPDELTYEELINCLCE--------- 319
           ++  Y+ +I  LC    +++ ++LF  M+  +    PD +TY  L N LC          
Sbjct: 488 DVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAID 547

Query: 320 --NLRLDDAND---------------------------------------------ILED 332
             N  LD+  D                                             I+E+
Sbjct: 548 LLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEE 607

Query: 333 MIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
           M++  L P    +  +++  C+  +  E+++
Sbjct: 608 MLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 215/511 (42%), Gaps = 33/511 (6%)

Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
           N++L +++   R  AD    +  +V AG  P+    N  ++       ++ AL   RRM 
Sbjct: 127 NLLLESLLSVGR-HADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMG 185

Query: 230 KK--GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           +      P++ ++ +VI GL  + +  D++ +  EM D G+      Y  +I    +   
Sbjct: 186 RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGD 245

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
           LE   RL   M      P+ +TY  L++ LC   R+D+   ++++M    + P    +  
Sbjct: 246 LEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSI 305

Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
           +  GL   G     ++                                 E +    I   
Sbjct: 306 LFDGLTRTGDSRTMLSLFG------------------------------ESLKKGVIIGA 335

Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
            + +I +  LC++ ++ KA ++L  +V + +VP  A Y+  + G C++ + + A  +F Q
Sbjct: 336 YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQ 395

Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRK 527
           + ++ +  D I+Y+ L+ GLC++E ITEA ++   M K+G   S  +FN LI       +
Sbjct: 396 MKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQ 455

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           ++K   + S     G      ++  ++    K  +  + + +L  M+ +    + + Y  
Sbjct: 456 LEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNS 515

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           +I +  E    +   L    M  +G+     T   LL GL   SQ+      I  L +  
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG 575

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
              D   YN +I+    +G T +A  LL  M
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEM 606



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 200/448 (44%), Gaps = 45/448 (10%)

Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
           +NVV+  +    +G +D + V+ EMV  G+ PN  T N +++   +   +E+      +M
Sbjct: 198 YNVVIAGLWRSGKG-SDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQM 256

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM---------------FD-------- 265
            + G  PN  T+ +++ GL    R+D++ +++ EM               FD        
Sbjct: 257 LQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDS 316

Query: 266 ------LGIQLE----LSFYTCIIPM--LCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
                  G  L+    +  YTC I +  LC++ K+ +A ++ +M+    L+P    Y  L
Sbjct: 317 RTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTL 376

Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGY 371
           IN  C+   L  A  I E M    + P    +  ++ GLC++    E+ + + +  K G 
Sbjct: 377 INGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGV 436

Query: 372 VTS--PHNALLECCCNAGKFFLAKC--ILEKMADRKI-ADCDSWNIPIRWLCENEEIRKA 426
             S    N L++    AG+  L KC  +L  M D+ I ++  S+   ++  C+N +I +A
Sbjct: 437 DPSVETFNTLIDAYGRAGQ--LEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEA 494

Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
             +L  M+   VVP+   Y++ +    +    E A  +  ++ +  +     +Y+ L++G
Sbjct: 495 VAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKG 554

Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
           LC+  +I EA E+   ++  G      S+N +I   C     D+A+ L    +      T
Sbjct: 555 LCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPT 614

Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQML 574
             TY  ++  L    R  D+  +   M+
Sbjct: 615 LRTYHPLLSALGSAGRVHDMECLYQHMV 642



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/501 (20%), Positives = 201/501 (40%), Gaps = 34/501 (6%)

Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
           +P++ + N LLE L    R       F  +   G  P++  +   ++  +A   +D++++
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 259 ILGEMF-DLGIQLELSF-YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
           +L  M    G     +F Y  +I  L R  K  +A+++F  M    + P+++TY  +I+ 
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
             +   L+    + + M+  G  P                               VT  +
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPN-----------------------------VVT--Y 268

Query: 377 NALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N LL   C AG+    + ++++M     + D  +++I    L    + R    L G  + 
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLK 328

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
             V+    T S  + G CK      A +V   +    LV  +  Y+ L+ G CQV  +  
Sbjct: 329 KGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQG 388

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A  +F  M          ++N LI GLC M  + +A  L      SG   +  T+  ++ 
Sbjct: 389 AFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLID 448

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
              +  + +    VL+ M  +G   +V ++  ++++  +  K+ +     + M+   +VP
Sbjct: 449 AYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVP 508

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           + +   S++    +          + K+ S         YN+L+ GL K     +A  L+
Sbjct: 509 NAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELI 568

Query: 676 DLMLGKGWVPDATTHGLLVGS 696
             +  +G  PD  ++  ++ +
Sbjct: 569 YNLTNQGLRPDVVSYNTIISA 589



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 24/325 (7%)

Query: 115 MEGLCQNMVKERYPNVREALI--------SLVFSFVNHY----RVNGAMRVLVNMNSGGF 162
           + GLC++    +   V E L+        ++  + +N Y     + GA  +   M S   
Sbjct: 342 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHI 401

Query: 163 KLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
           +     +N ++  +  +E      D V    EM K+G+ P+V+T N L++      ++E 
Sbjct: 402 RPDHITYNALINGLCKMEMITEAEDLVM---EMEKSGVDPSVETFNTLIDAYGRAGQLEK 458

Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
                  M  KG   N  +F  V+K    N ++ ++V+IL +M    +      Y  II 
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518

Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
                   E+A  L + M++  +     TY  L+  LC+N ++D+A +++ ++   GL P
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRP 578

Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
               +  I+   C  G  D ++  L++   Y   P    ++ LL    +AG+    +C+ 
Sbjct: 579 DVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLY 638

Query: 397 EKMADRKIADCDSWNIPIRWLCENE 421
           + M  + +    S        CENE
Sbjct: 639 QHMVHKNVEPSSSI---YGTRCENE 660



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 58/321 (18%), Positives = 116/321 (36%), Gaps = 58/321 (18%)

Query: 452 KCKLCN---------------------------------------------YEDALRVFR 466
             +LC                                              + D    F 
Sbjct: 88  SARLCQPDGALRLLSLLASAGDGACAGSVRSPLPSLSSCNLLLESLLSVGRHADVRAAFG 147

Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM--SKNGCSLSSSSFNILIYGLCV 524
            + A     D+ +++K V+       + EA+ +   M  S+      + S+N++I GL  
Sbjct: 148 LLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWR 207

Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
             K   A+++       G +    TY  ++ G VK    +    +  QML +G   +V  
Sbjct: 208 SGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVT 267

Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
           Y +L+  +    ++ +     + M    ++PD  T   L  GL        + S   + +
Sbjct: 268 YNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESL 327

Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS-------- 696
               ++ +   +IL+NGL K+G  ++A  +L++++  G VP    +  L+          
Sbjct: 328 KKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQ 387

Query: 697 ---SVGEEIDSRRFAFDSSSF 714
              S+ E++ SR    D  ++
Sbjct: 388 GAFSIFEQMKSRHIRPDHITY 408


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/458 (21%), Positives = 212/458 (46%), Gaps = 18/458 (3%)

Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
           V+GA+ +  ++      L+   FN +LG++V+ K  +   + + ++M   GI PN  T N
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKH-YHTVLSLSQQMEFEGINPNFVTFN 107

Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
            L+    +   I  A     ++ K G  P+  T    IKG     ++  +++   ++  L
Sbjct: 108 ILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167

Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
           G  L+   Y  +I  LC+  +   A++L + +    +  + + Y  +I+ + ++  ++DA
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227

Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
            D+  +M+   ++P    +  ++RG   VGK  ++++           P     N L++ 
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 287

Query: 383 CCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
            C  G+   AK +L+ M  + I  +  ++N  +   C++ ++++   +   M+   + P+
Sbjct: 288 FCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347

Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
             TY + + G C +     A ++F  +S + +  +  SY+ ++ G C+++K+ +A+++F 
Sbjct: 348 VVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFI 407

Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
            M          ++N LI GLC   K+  A +L +  +  G      TY  I+  L  L 
Sbjct: 408 EMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL--LT 465

Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
           + KD          +G   ++    ILI+ + +  KL+
Sbjct: 466 KLKD----------QGIQPNMHTDTILIKGLCQSGKLE 493



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 191/427 (44%), Gaps = 23/427 (5%)

Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
           VD +VS+   +      L    +  I+  L +       + L + M    + P+ +T+  
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108

Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE------ 366
           LINC C+   +  A  +L  ++ +G  P        ++G C  G+  +++NF +      
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168

Query: 367 ---DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDS--WNIPIRWLCENE 421
              D+  Y T     L+   C  G+   A  +L ++ D K+   ++  +N  I  + +++
Sbjct: 169 FHLDQVSYGT-----LINGLCKVGETRAALQLLRRV-DGKLVQLNAVMYNTVIDGMSKDK 222

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A++L   MV   + PD  TYSA + G   +   +DA+ +F ++  +++  D  +++
Sbjct: 223 HVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 282

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
            LV+G C+  ++ +A  V   M       + S+FN L+ G C  RK+ +   + ++    
Sbjct: 283 ILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQ 342

Query: 542 GTSYTTSTYTKIMLG--LVK-LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
           G      TY  +M G  LVK + +AK +   ++Q    G   +V +Y I+I    +  K+
Sbjct: 343 GIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ---RGVTANVHSYNIMINGFCKIKKV 399

Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
                 F  M    ++PD  T  SL+ GL    ++      +N++    +  +   YN +
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSI 459

Query: 659 INGLWKE 665
           +N L  +
Sbjct: 460 LNALLTK 466



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 1/319 (0%)

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           N L+ C C  G    A  +L K+       D  + N  I+  C   +I +A     ++V 
Sbjct: 107 NILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVA 166

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
                D  +Y   + G CK+     AL++ R+V  + + L+++ Y+ +++G+ + + + +
Sbjct: 167 LGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A +++  M     S    +++ LI G  ++ K+  AI L +            T+  ++ 
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           G  K  R K    VL  M+++    +V  +  L+    +  K+K+    F +M+K G+ P
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 346

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
           +  T  SL+ G     Q++      N +       +   YNI+ING  K     +A  L 
Sbjct: 347 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLF 406

Query: 676 DLMLGKGWVPDATTHGLLV 694
             M  K  +PD  T+  L+
Sbjct: 407 IEMHHKHIIPDVVTYNSLI 425



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 203/480 (42%), Gaps = 46/480 (9%)

Query: 57  LRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME 116
           L+ N  P   I    ++ND+  A+ +F  + + +    TA  + K++  L  + +   + 
Sbjct: 30  LQKNFIPYSSISTTFHSNDVDGAVSLFNSL-LHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 117 GLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGA 175
            L Q M  E   PN     I L+  F     +  A  VL  +   G++  +   N  +  
Sbjct: 89  SLSQQMEFEGINPNFVTFNI-LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKG 147

Query: 176 I-----VEEKRGFADFVFVYKEMVKAGIVPNVDTLNY--LLEVLFETNRIESALDQFRRM 228
                 + +   F D      ++V  G   ++D ++Y  L+  L +     +AL   RR+
Sbjct: 148 FCLKGQIHQALNFHD------KLVALGF--HLDQVSYGTLINGLCKVGETRAALQLLRRV 199

Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
             K    N+  +  VI G+  +  V+D+  +  EM    I  ++  Y+ +I       KL
Sbjct: 200 DGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKL 259

Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
           ++AI LF  M   ++ PD  T+  L++  C+  RL  A ++L+ M++  + P    F  +
Sbjct: 260 KDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTL 319

Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
           V G C+  K  E              P    + +L++  C   +   AK I   M+ R +
Sbjct: 320 VDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGV 379

Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
            A+  S+NI I   C+ +++ KA +L   M    ++PD  TY++ + G CK      A +
Sbjct: 380 TANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQ 439

Query: 464 VFRQVSAQSLVLDSISYSK-----------------------LVEGLCQVEKITEAVEVF 500
           +  ++  +    + I+Y+                        L++GLCQ  K+  A +VF
Sbjct: 440 LVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVF 499



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 152/322 (47%), Gaps = 16/322 (4%)

Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
            A+++L  ++    +L+  ++N V+  + ++K    D   +Y EMV   I P+V T + L
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKH-VNDAFDLYSEMVAKRISPDVVTYSAL 249

Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
           +   F   +++ A+D F +M  +   P+  TF I++ G     R+  + ++L  M    I
Sbjct: 250 IRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDI 309

Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
           +  +S +  ++   C++ K++E   +F MM    + P+ +TY  L++  C   +++ A  
Sbjct: 310 KPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKK 369

Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN-FLEDKCGYVTS---PHNALLECCC 384
           I   M   G+T     +  ++ G C++ K D+++  F+E    ++      +N+L++  C
Sbjct: 370 IFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLC 429

Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
            +GK   A  ++ +M DR          P   +  N  +     LL ++    + P+  T
Sbjct: 430 KSGKISYAFQLVNEMHDR--------GQPPNIITYNSILN---ALLTKLKDQGIQPNMHT 478

Query: 445 YSAFVLGKCKLCNYEDALRVFR 466
            +  + G C+    E A +VF 
Sbjct: 479 DTILIKGLCQSGKLEAARKVFE 500



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 5/264 (1%)

Query: 436 SSVVPDCATYSAFVLGK-----CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
           +S++    T +AF   K      K  +Y   L + +Q+  + +  + ++++ L+   CQ+
Sbjct: 57  NSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQL 116

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
             I  A  V   + K G      + N  I G C+  ++ +A+       + G      +Y
Sbjct: 117 GLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSY 176

Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
             ++ GL K+   +  L +L ++  +   L+   Y  +I  MS+   + D    ++ MV 
Sbjct: 177 GTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVA 236

Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
             + PD  T  +L+ G     +L       NK++ ++   D   +NIL++G  KEG   +
Sbjct: 237 KRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKK 296

Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
           A  +LD+M+ +   P+ +T   LV
Sbjct: 297 AKNVLDMMMIQDIKPNVSTFNTLV 320



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 67/154 (43%)

Query: 528 VDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCI 587
           VD A+ L +       + T   + KI+  LVK +    +L +  QM  EG   +   + I
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108

Query: 588 LIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDS 647
           LI    +   +         ++K G  PD  T+ + + G     Q+H   +  +KLV+  
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168

Query: 648 EVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
             LD   Y  LINGL K G T  A  LL  + GK
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGK 202


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 204/457 (44%), Gaps = 18/457 (3%)

Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
            +N VL  +   K+ +     + +EM++    PN  T    +    +   ++ A+    R
Sbjct: 212 TYNTVLKGLCGAKQ-WEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLER 270

Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
           M + GC P+   +  ++ G     RVDD++ +L  M     +     Y   +  LC   +
Sbjct: 271 MPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAER 327

Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
            ++   L   M   D  P+E T+  L +CLC++  +D A +++E M   G  P   ++  
Sbjct: 328 WKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNT 387

Query: 348 IVRGLCEVGKFDESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIAD 406
           ++    E G+ D+++  L+   C   T   NA L+  C   +++  + ++ +M      D
Sbjct: 388 LINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLRE---D 444

Query: 407 CD----SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
           C     ++NI I  LC++  +  A E+  +M      PD  TYS+ + G  +    E A+
Sbjct: 445 CPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAI 504

Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
            +F+ +  +    D  SY+ +++GLC+  +  +A E+   M++  C  +  +FNILI  L
Sbjct: 505 ELFQSMPCKP---DIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSL 561

Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
           C     D+AI +       G++    TY  ++ G  +  R  D L +L+ M    C  D 
Sbjct: 562 CQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDA 618

Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
            +Y   ++ +    + K+       M++    P+  T
Sbjct: 619 ISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVT 655



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 174/385 (45%), Gaps = 18/385 (4%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           +LV  F    RV+ A   LV +N+   K +   +N  L  +   +R + D   +  EMV+
Sbjct: 285 TLVNGFSEQGRVDDA---LVLLNTMLCKPNTVCYNAALKGLCMAER-WKDVGELIAEMVR 340

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
               PN  T + L   L +   ++ A++   +M K GC P+   +  +I       RVDD
Sbjct: 341 KDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDD 400

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
           ++ +L  M       +   +   +  LCR  +  +   L   M   D    E+T+  LI+
Sbjct: 401 ALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILID 457

Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-KCGYVTS 374
            LC++  ++ A ++ E M     TP    +  ++ G  E G  + ++   +   C     
Sbjct: 458 SLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDIF 517

Query: 375 PHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRWLCENEEIRKAYELL 430
            +NA+L+  C A ++  A  ++  MA +   DC     ++NI I  LC+     +A E+ 
Sbjct: 518 SYNAVLKGLCRAARWEDAGELIANMARK---DCPPNEITFNILINSLCQKGFADRAIEVF 574

Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
            +M      PD  TY+A + G  +    +DAL +   +S +    D+ISY+  ++GLC+ 
Sbjct: 575 KQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCKP---DAISYNSTLKGLCRA 631

Query: 491 EKITEAVEVFCCMSKNGCSLSSSSF 515
           E+  EA E+   M +  C  +  +F
Sbjct: 632 ERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 202/491 (41%), Gaps = 54/491 (10%)

Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
           N  T+  +I G   + R+ D+++++  M    +  +   Y  ++  LC   + E+A  L 
Sbjct: 177 NVVTYTALINGYCRSGRLADALNLIASM---PVAPDTYTYNTVLKGLCGAKQWEKAEELM 233

Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
           + M   +  P+E+T+   I   C+N  LD A  +LE M   G TP   ++  +V G  E 
Sbjct: 234 EEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQ 293

Query: 356 GKFDESVNFLEDK-CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SW 410
           G+ D+++  L    C   T  +NA L+  C A ++   K + E +A+    DC     ++
Sbjct: 294 GRVDDALVLLNTMLCKPNTVCYNAALKGLCMAERW---KDVGELIAEMVRKDCPPNEATF 350

Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
           ++    LC++  +  A E++ +M      PD   Y+  +    +    +DAL +   +  
Sbjct: 351 SMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLC 410

Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
                D+IS++  ++ LC+ E+  +  E+   M +  C L   +FNILI  LC    V+ 
Sbjct: 411 NP---DTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNH 467

Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
           AI                                    V  QM    C  D+  Y  LI 
Sbjct: 468 AIE-----------------------------------VFEQMPKYRCTPDIVTYSSLIN 492

Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
             SEQ  ++     F  M      PD  +  ++L GL   ++       I  +       
Sbjct: 493 GFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549

Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFA 708
           +   +NILIN L ++G   +A  +   M   G  PD  T+  L+   S  G   D+    
Sbjct: 550 NEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLL 609

Query: 709 FDSSSFPDSVS 719
              S  PD++S
Sbjct: 610 STMSCKPDAIS 620



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 187/453 (41%), Gaps = 76/453 (16%)

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
           I+IK L A+ R+ D+  +L  + + G    +S  T ++   CR+ +L +A R+ +  + +
Sbjct: 115 ILIKKLCAHRRLADAERVLDALKESGSADAVSHNT-LVAGYCRDGRLADAERVLEAAK-V 172

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
               + +TY  LIN  C + RL DA +++  M V    P    +  +++GLC   +++++
Sbjct: 173 SGAANVVTYTALINGYCRSGRLADALNLIASMPV---APDTYTYNTVLKGLCGAKQWEKA 229

Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
              +E+           ++   C+  +   A                     IR  C+N 
Sbjct: 230 EELMEE-----------MIRNNCHPNEVTFA-------------------TQIRSFCQNG 259

Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
            +  A +LL RM      PD   YS  V G  +    +DAL +   +  +    +++ Y+
Sbjct: 260 LLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKP---NTVCYN 316

Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
             ++GLC  E+  +  E+   M +  C  + ++F++L   LC    VD A+         
Sbjct: 317 AALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAME-------- 368

Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
                                      V+ QM   GC  DV  Y  LI   SEQ ++ D 
Sbjct: 369 ---------------------------VVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDA 401

Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
            +  + M+     PD  +  + L  L    + + V   I +++ +   L    +NILI+ 
Sbjct: 402 LMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDS 458

Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
           L + GL + A  + + M      PD  T+  L+
Sbjct: 459 LCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLI 491



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 7/176 (3%)

Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
           SL+  F     V  A+ +  +M     K  +  +N VL  +    R + D   +   M +
Sbjct: 489 SLINGFSEQGLVESAIELFQSMPC---KPDIFSYNAVLKGLCRAAR-WEDAGELIANMAR 544

Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
               PN  T N L+  L +    + A++ F++M + G  P+  T+  +I G     R+DD
Sbjct: 545 KDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDD 604

Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
           ++++L  M     + +   Y   +  LCR  + +EA  +   M      P+E+T++
Sbjct: 605 ALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFK 657


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 203/459 (44%), Gaps = 47/459 (10%)

Query: 95  TADTYCKMILKLGLAG--NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMR 152
             DTY    + +GL G    E+ E L   MV+   P       + + +F  +  ++ A++
Sbjct: 209 APDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQ 268

Query: 153 VLVNMNSGGFKLSVDVFNVVLGAIVEEKR------------------------------- 181
           +L  M   G    V +++ ++    E+ R                               
Sbjct: 269 LLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQ 328

Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
            + D   +  EMV+   +PN  T + L   L +   ++ A++   +MHK GC P++  + 
Sbjct: 329 RWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYN 388

Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
            +I       RVDD++ +L  M       ++  +   +  LCR  + ++A  L   M   
Sbjct: 389 TLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLRE 445

Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
           D    E+T+  LI+ LC+N R+++A ++ E M   G TP    +  ++ GL E G  + +
Sbjct: 446 DCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESA 505

Query: 362 VNFLED-KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD----SWNIPIRW 416
           +   +   C      +NA+L+  C A ++  A  ++  MA +   DC     ++NI I  
Sbjct: 506 IELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARK---DCPPNEITFNILINS 562

Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
           LC+   + +A E+  +M      PD  TY+A + G  +    +DA R+   +S +    D
Sbjct: 563 LCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKP---D 619

Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
           ++SY+  ++GLC+ E+  EA EV   M +  C  +  +F
Sbjct: 620 AVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 198/479 (41%), Gaps = 73/479 (15%)

Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
           YT +I   CR  +L +A+ L   M    + PD  TY  ++  LC   + +DA  ++ +M+
Sbjct: 183 YTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWEDAEALMAEMV 239

Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
                P +  F   +R  C+ G  D +V  L+    Y  +P   +     N         
Sbjct: 240 RNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG-------- 291

Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
                                   E   +  A ELL  M+     P+   Y+A + G C 
Sbjct: 292 ----------------------FSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCI 326

Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
              +ED  ++  ++  +  + +  ++S L   LCQ   +  A+EV   M K GC   +  
Sbjct: 327 AQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVI 386

Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
           +N LIY      +VD A++L +   S   S    ++   + GL + +R  D   ++ QML
Sbjct: 387 YNTLIYSFSEQGRVDDALKLLN---SMPCSPDVISFNAALKGLCRAERWDDAEELIVQML 443

Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG---- 630
            E C L    + ILI S+ +  ++ +    F  M K G  PD  T  SL++GL++     
Sbjct: 444 REDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVE 503

Query: 631 SQLHLVSS--------GINKLVS---------DSEVLDSSM-----------YNILINGL 662
           S + L  S        G N ++          D+  L S+M           +NILIN L
Sbjct: 504 SAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSL 563

Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG--SSVGEEIDSRRFAFDSSSFPDSVS 719
            ++GL  +A  + + M   G  PD  T+  L+   S  G   D+RR     S  PD+VS
Sbjct: 564 CQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKPDAVS 622



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 204/476 (42%), Gaps = 25/476 (5%)

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           NV T   L+     + R+  AL     M      P++ T+  V+ GL    + +D+ +++
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
            EM           +   I   C+   L+ A++L   M      PD + Y  L+N   E 
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295

Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES----VNFLEDKCGYVTSPH 376
            R+DDA ++L  M+     P    +   ++GLC   ++++     V  +   C    +  
Sbjct: 296 GRVDDAIELLNGMLC---KPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
           + L  C C  G    A  +LE+M       D   +N  I    E   +  A +LL  M  
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPC 412

Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
           S   PD  +++A + G C+   ++DA  +  Q+  +   L  ++++ L++ LCQ  ++  
Sbjct: 413 S---PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469

Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
           A+EVF  M K GC+    +++ LI GL     V+ AI    L  S         Y  ++ 
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAI---ELFQSMPCKPDIFGYNAVLK 526

Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
           GL +  R +D   +++ M  + C  +   + ILI S+ ++  +      F  M K G  P
Sbjct: 527 GLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTP 586

Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGL-----WKEG 666
           D  T  +L++G ++  +L      ++ +       D+  YN  + GL     WKE 
Sbjct: 587 DIFTYNALINGFSEQGRLDDARRLLSTMSCKP---DAVSYNSALKGLCRAERWKEA 639



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 36/231 (15%)

Query: 113 EEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV------ 166
           ++ E L   M++E  P +      L+ S   + RVN A+ V   M   G    +      
Sbjct: 433 DDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSL 492

Query: 167 ------------------------DVF--NVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
                                   D+F  N VL  +    R + D   +   M +    P
Sbjct: 493 INGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAAR-WEDAGELISNMARKDCPP 551

Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
           N  T N L+  L +   ++ A++ F +M K G  P+  T+  +I G     R+DD+  +L
Sbjct: 552 NEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLL 611

Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
             M     + +   Y   +  LCR  + +EA  +   M  +   P+E+T++
Sbjct: 612 STM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFK 659


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.137    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,375,541,999
Number of Sequences: 23463169
Number of extensions: 414394449
Number of successful extensions: 1115776
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5047
Number of HSP's successfully gapped in prelim test: 3577
Number of HSP's that attempted gapping in prelim test: 954096
Number of HSP's gapped (non-prelim): 60971
length of query: 729
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 579
effective length of database: 8,839,720,017
effective search space: 5118197889843
effective search space used: 5118197889843
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)