BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004813
(729 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 170/666 (25%), Positives = 312/666 (46%), Gaps = 18/666 (2%)
Query: 54 IQSLR---HNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
+ SLR H ++P L ++L+ ++S+++++F W Q ++H+ D Y +I KLG G
Sbjct: 66 LDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANG 125
Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVF 169
+ ++ L M E IS++ + R+++ M N + + +
Sbjct: 126 EFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY 185
Query: 170 NVVLGAIVEEK-RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
NVVL +V A VF +M+ I P + T +++ N I+SAL R M
Sbjct: 186 NVVLEILVSGNCHKVAANVFY--DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
K GC PNS ++ +I L +RV++++ +L EMF +G + + +I LC+ +++
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
EA ++ M PD++TY L+N LC+ R+D A D+ + P +F +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359
Query: 349 VRGLCEVGKFDESVNFLEDK-CGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
+ G G+ D++ L D Y P +N+L+ G LA +L M ++
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
+ S+ I + C+ +I +AY +L M + P+ ++ + CK +A+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
+FR++ + D +++ L+ GLC+V++I A+ + M G ++ ++N LI
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
++ +A +L + G+ TY ++ GL + + +ML +G A
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
+ ILI + +++ F MV G PD T SL++GL ++ + K
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEE- 701
L ++ D+ +N L++ L K G A LLD + G+VP+ T +L+ S + +E
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719
Query: 702 IDSRRF 707
+D RRF
Sbjct: 720 LDRRRF 725
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 161/671 (23%), Positives = 300/671 (44%), Gaps = 41/671 (6%)
Query: 66 LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE 125
L+ L + D S+AL++F S + F Y +++L+LG +G+ ++M+ + ++M
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 126 RYPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEEKRGFA 184
R + L+ S+ + + V+ M + G K +N +L +V+
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLK 171
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
+ +M GI P+V T N L++ L +++ A+ M G P+ +TF V+
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD-L 303
+G I +D ++ I +M + G I+ C+E ++E+A+ + M D
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN 363
PD+ T+ L+N LC+ + A +I++ M+ G P + ++ GLC++G+ E+V
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEI 423
L+ SP+ ++N I LC+ ++
Sbjct: 352 VLDQMITRDCSPNTV------------------------------TYNTLISTLCKENQV 381
Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
+A EL + ++PD T+++ + G C N+ A+ +F ++ ++ D +Y+ L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
++ LC K+ EA+ + M +GC+ S ++N LI G C K +A + G
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
S + TY ++ GL K +R +D ++ QM++EG D Y L+ +K A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
M G PD T +L+ GL ++ + S + + L YN +I GL+
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 664 KEGLTSQASYLLDLMLGKGWV-PDATTHGLLV------GSSVGEEIDSRRFAFDSSSFPD 716
++ T++A L ML + PDA ++ ++ G + E +D + P+
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Query: 717 SVS-DILAEGL 726
S +LAEGL
Sbjct: 682 FSSLYMLAEGL 692
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 224/475 (47%), Gaps = 12/475 (2%)
Query: 132 EALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYK 191
+ +++ ++ ++GA+R+ M G S NV++ +E R F+ +
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
+ G P+ T N L+ L + ++ A++ M ++G P+ T+ VI GL
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
V ++V +L +M Y +I LC+EN++EEA L +++ + ++PD T+
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED---- 367
LI LC A ++ E+M G P + + ++ LC GK DE++N L+
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 368 KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
C +N L++ C A K A+ I ++M ++ + ++N I LC++ + A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
+L+ +M++ PD TY++ + C+ + + A + + +++ D ++Y L+ G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSY 545
LC+ ++ A ++ + G +L+ ++N +I GL RK +AI L R + +
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 546 TTSTYTKIMLGLV----KLQRAKDLLVVLAQ--MLVEGCALDVEAYCILIQSMSE 594
+Y + GL ++ A D LV L + + E +L + A +L SM E
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 173/668 (25%), Positives = 314/668 (47%), Gaps = 47/668 (7%)
Query: 69 VLDNTNDLSSALKIFKWV-SIQKRFQH-----TADTYCKMILKLGLAGNVEEMEGLCQNM 122
+L NTN+ A +IFK + S H T +++++ + ++E+ L +
Sbjct: 9 LLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSS 68
Query: 123 VKERYPNVREALISLV--FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
++ +L+S+V F+ NH LV K SV ++N++L + ++E+
Sbjct: 69 SIQK--TKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKER 126
Query: 181 RGFADFV-FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
R +FV ++YK+MV GI P T N L+ L +++ +++A + F M +KGC PN T
Sbjct: 127 R--VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
F I+++G D + +L M G+ Y I+ CRE + +++ ++ + MR
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244
Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIV---IGLT-PTDDVFVDIVRGLCEV 355
L+PD +T+ I+ LC+ ++ DA+ I DM + +GL P + +++G C+V
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 356 GKFDESVNFLE-----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC-DS 409
G +++ E D + S +N L+ GKF A+ +L++M D+ I S
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQS-YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 410 WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS 469
+NI + LC+ + A ++G M + V PD TY + G C + + A + +++
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 470 AQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD 529
+ + ++ + + L+ L ++ +I+EA E+ M++ G L + + NI++ GLC ++D
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483
Query: 530 KAIRL-------RSLAYSS-GTSYTT---------------STYTKIMLGLVKLQRAKDL 566
KAI + S A + G SY TY+ ++ GL K R +
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543
Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
+ A+M+ E D AY I I +Q K+ M K G ET SL+ G
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603
Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
L +Q+ + ++++ + YN I L + A+ LLD M+ K P+
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 687 ATTHGLLV 694
+ L+
Sbjct: 664 VFSFKYLI 671
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 142/613 (23%), Positives = 261/613 (42%), Gaps = 75/613 (12%)
Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
LV + + + +L M S G + ++N ++ + E R D + ++M +
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN-DDSEKMVEKMREE 246
Query: 197 GIVPNVDTLNYLLEVLFETNRIESA--------LDQFRRMHKKGCCPNSRTFEIVIKGLI 248
G+VP++ T N + L + ++ A LD++ + + PNS T+ +++KG
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR----PNSITYNLMLKGFC 302
Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
++D+ ++ + + L Y + L R K EA + K M + P
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
+Y L++ LC+ L DA I+ M G+ P + ++ G C VGK D + + L++
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 369 CGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
P+ N LL G+ A+ +L KM ++ D + NI + LC + E+
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 424 RKAYELLGRMVV-----------------------SSVVPDCATYSAFVLGKCKLCNYED 460
KA E++ M V ++ +PD TYS + G CK + +
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
A +F ++ + L DS++Y+ + C+ KI+ A V M K GC S ++N LI
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
GL + ++ + L G S TY + L + ++ +D +L +M+ + A
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 581 DVEAYCILIQS--------MSEQ----------NKLKDCALFFNVMVKAG---------- 612
+V ++ LI++ M+++ K +L FN ++ AG
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722
Query: 613 LVPDRETMLS------LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
V DR L L+ L +L + S ++K++ D + +I+GL K G
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Query: 667 LTSQASYLLDLML 679
+A+ D M+
Sbjct: 783 NKKEANSFADKMM 795
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 193/437 (44%), Gaps = 36/437 (8%)
Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL--DLMPDELTYEELINCLCENLRLDDA 326
+ +LS ++ + + N +++A F+++R+ + P Y L+ + R++
Sbjct: 72 KTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFV 131
Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
+ + +DM++ G+ P F ++R LC+ D + ++ + E C
Sbjct: 132 SWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDE-----------MPEKGCKP 180
Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
+F ++ I +R C+ K ELL M V+P+ Y+
Sbjct: 181 NEF-------------------TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYN 221
Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
V C+ +D+ ++ ++ + LV D ++++ + LC+ K+ +A +F M +
Sbjct: 222 TIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 507 ---GCSLSSS-SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
G +S ++N+++ G C + ++ A L + + +Y + GLV+ +
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
+ VL QM +G + +Y IL+ + + L D +M + G+ PD T
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGC 401
Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
LLHG ++ S + +++ ++ + ++ NIL++ LWK G S+A LL M KG
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 683 WVPDATTHGLLVGSSVG 699
+ D T ++V G
Sbjct: 462 YGLDTVTCNIIVDGLCG 478
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 153/642 (23%), Positives = 293/642 (45%), Gaps = 10/642 (1%)
Query: 61 LSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQ 120
L P H+ V+ D AL++F + + F+HT TY +I KLG G E ME +
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 121 NMVKERYPNVREAL-ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEE 179
+M + ++ E + + + ++ +V A+ V M+ + +V +N ++ +V+
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 124
Query: 180 KRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
G+ D VY M GI P+V + ++ +T+R +AL M +GC N
Sbjct: 125 --GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 182
Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
+ V+ G + + + G+M G+ L LS + ++ +LC++ ++E +L +
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
++P+ TY I LC+ LD A ++ +I G P + +++ GLC+ KF
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 359 DESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL-EKMADRKIADCDSWNIP 413
E+ +L P +N L+ C G LA+ I+ + + + + D ++
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
I LC E +A L + + P+ Y+ + G +A ++ ++S + L
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
+ + +++ LV GLC++ +++A + M G +FNILI+G K++ A+
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
+ + +G TY ++ GL K + +D++ M+ +GCA ++ + IL++S+
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
KL + M + PD T +L+ G L + K+ +V S+
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 654 -MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
YNI+I+ ++ + A L M+ + PD T+ L+V
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/554 (24%), Positives = 254/554 (45%), Gaps = 7/554 (1%)
Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIV 199
SF R + A+R+L NM+S G +++V + V+G EE A+ ++ +M+ +G+
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK-AEGYELFGKMLASGVS 213
Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
+ T N LL VL + ++ ++ K+G PN T+ + I+GL +D +V +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
+G + + G + ++ Y +I LC+ +K +EA M L PD TY LI C+
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
+ A I+ D + G P + ++ GLC G+ + ++ + G P
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 376 HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMV 434
+N L++ N G A + +M+++ I + ++NI + LC+ + A L+ M+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 435 VSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKIT 494
PD T++ + G E+AL + + + D +Y+ L+ GLC+ K
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 495 EAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIM 554
+ +E + M + GC+ + +FNIL+ LC RK+D+A+ L + + T+ ++
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 555 LGLVKLQRAKDLLVVLAQML-VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
G K + +M + Y I+I + +E+ + F MV L
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
PD T ++ G ++L + +++ + + + +IN L E +A+
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 674 LLDLMLGKGWVPDA 687
++ M+ KG VP+A
Sbjct: 694 IIHRMVQKGLVPEA 707
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 137/313 (43%), Gaps = 6/313 (1%)
Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
++++A + RM P +Y+A + ++ A +V+ ++ + + D S++
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
++ C+ + A+ + MS GC ++ ++ ++ G + L +S
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210
Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
G S ST+ K++ L K K+ +L +++ G ++ Y + IQ + ++ +L
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
+++ G PD T +L++GL S+ + K+V++ DS YN LI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS-- 719
K G+ A ++ + G+VPD T+ L+ E +R A + + +
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 720 ----DILAEGLGN 728
+ L +GL N
Sbjct: 391 VILYNTLIKGLSN 403
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 232/499 (46%), Gaps = 6/499 (1%)
Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
L+ F +++ A+ +L M G++ S+ + +L KR +D V + +MV+
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEM 109
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
G P+ T L+ LF N+ A+ RM ++GC PN T+ +V+ GL +D +
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
++L +M I+ ++ + II LC+ +++A+ LFK M + P+ +TY LI+C
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
LC R DA+ +L DMI + P F ++ + GKF E+ +D P
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
+N+L+ C + AK + E M + D D++N I+ C+++ + EL
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
M +V D TY+ + G + ++A +VF+Q+ + + D ++YS L++GLC
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
K+ +A+EVF M K+ L + +I G+C KVD L G TY
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
++ GL + ++ +L +M +G D Y LI++ A M
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Query: 612 GLVPDRETMLSLLHGLADG 630
V D T+ + + L DG
Sbjct: 530 RFVGDASTIGLVANMLHDG 548
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/535 (25%), Positives = 253/535 (47%), Gaps = 6/535 (1%)
Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
S+ FN +L AI + K+ F + + ++M + GI N+ T N L+ ++I AL
Sbjct: 9 SIFEFNKLLSAIAKMKK-FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
+M K G P+ T ++ G R+ D+V+++ +M ++G + + +T +I L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
NK EA+ L M P+ +TY ++N LC+ +D A ++L M + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
F I+ LC+ D+++N ++ P +++L+ C C+ G++ A +L M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
++KI + ++N I + + +A +L M+ S+ PD TY++ + G C +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
A ++F + ++ D +Y+ L++G C+ +++ + E+F MS G + ++ LI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
GL D A ++ S G TY+ ++ GL + + L V M
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
LD+ Y +I+ M + K+ D F + G+ P+ T +++ GL L +
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ K+ D + DS YN LI ++G + ++ L+ M +V DA+T GL+
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 542
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 203/500 (40%), Gaps = 10/500 (2%)
Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
M K P+ F ++ + + D +S+ +M LGI L Y +I CR ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
+ A+ L M L P +T L+N C R+ DA +++ M+ +G P F
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
++ GL K E+V ++ P + ++ C G LA +L KM K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
I AD +N I LC+ + A L M + P+ TYS+ + C + DA
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
++ + + + + ++++ L++ + K EA ++ M K ++N LI G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
C+ ++DKA ++ S TY ++ G K +R +D + +M G D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
Y LIQ + + F MV G+ PD T LL GL + +L +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
+ LD +Y +I G+ K G L + KG P+ T+ ++ + +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 703 DSRRFAF-----DSSSFPDS 717
+A + PDS
Sbjct: 481 LQEAYALLKKMKEDGPLPDS 500
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 105/251 (41%), Gaps = 3/251 (1%)
Query: 76 LSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALI 135
L A ++F+++ + F DTY +I + VE+ L + M
Sbjct: 306 LDKAKQMFEFMVSKDCFPDL-DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
+L+ + + A +V M S G + ++++L + + + V+ M K
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK-LEKALEVFDYMQK 423
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
+ I ++ ++E + + +++ D F + KG PN T+ +I GL + + +
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
+ ++L +M + G + Y +I R+ + L + MR+ + D T + N
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Query: 316 CLCENLRLDDA 326
L + RLD +
Sbjct: 544 MLHDG-RLDKS 553
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 230/498 (46%), Gaps = 34/498 (6%)
Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
L+ F +++ A+ +L M G++ S+ + +L KR +D V + +MV+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEM 184
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
G P+ T L+ LF N+ A+ RM ++GC PN T+ +V+ GL D +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
+++L +M I+ ++ + II LC+ +++A+ LFK M + P+ +TY LI+C
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
LC R DA+ +L DMI + P F
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTF------------------------------- 333
Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
NAL++ GKF A+ + + M R I D ++N + C ++ + KA ++ MV
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
PD TY+ + G CK ED +FR++S + LV D+++Y+ L++GL
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
A +VF M +G +++IL+ GLC K++KA+ + S YT ++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
G+ K + D + + ++G +V Y +I + + L++ M + G +P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 616 DRETMLSLLHG-LADGSQ 632
+ T +L+ L DG +
Sbjct: 574 NSGTYNTLIRAHLRDGDK 591
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 252/535 (47%), Gaps = 6/535 (1%)
Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
S+ FN +L AI + K+ F + + ++M + IV + T N L+ ++I AL
Sbjct: 84 SIVEFNKLLSAIAKMKK-FDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
+M K G P+ T ++ G R+ D+V+++ +M ++G + + +T +I L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
NK EA+ L M P+ +TY ++N LC+ D A ++L M + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
F I+ LC+ D+++N ++ P +++L+ C C+ G++ A +L M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
++KI + ++N I + + +A +L M+ S+ PD TY++ V G C +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
A ++F + ++ D ++Y+ L++G C+ +++ + E+F MS G + ++ LI
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
GL D A ++ S G TY+ ++ GL + + L V M
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
LD+ Y +I+ M + K+ D F + G+ P+ T +++ GL L +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ K+ D + +S YN LI ++G + ++ L+ M +V DA+T GL+
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 617
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 201/483 (41%), Gaps = 5/483 (1%)
Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
+++ A+ F M K P+ F ++ + + D +S+ +M L I L Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
+I CR +++ A+ L M L P +T L+N C R+ DA +++ M+ +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
G P F ++ GL K E+V ++ P + ++ C G LA
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
+L KM KI AD +N I LC+ + A L M + P+ TYS+ +
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
C + DA ++ + + + + ++++ L++ + K EA +++ M K
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
++N L+ G C+ ++DKA ++ S TY ++ G K +R +D +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
+M G D Y LIQ + + F MV G+ PD T LL GL +
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
+L + + LD +Y +I G+ K G L + KG P+ T+
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 692 LLV 694
++
Sbjct: 545 TMI 547
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 160/395 (40%), Gaps = 15/395 (3%)
Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD------ESVN 363
Y E++ +++LDDA + M+ P+ F ++ + ++ KFD E +
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 364 FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMA----DRKIADCDSWNIPIRWLCE 419
LE G T +N L+ C C + LA +L KM + I S + C
Sbjct: 113 RLEIVHGLYT--YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL---LNGYCH 167
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
+ I A L+ +MV PD T++ + G +A+ + ++ + + ++
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
Y +V GLC+ A+ + M FN +I LC R VD A+ L
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
+ G TY+ ++ L R D +L+ M+ + ++ + LI + ++ K
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
+ ++ M+K + PD T SL++G +L +VS D YN LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
G K + L M +G V D T+ L+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 36/173 (20%)
Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHK------------------ 230
V+K+MV G+ P++ T + LL+ L ++E AL+ F M K
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 231 -----------------KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS 273
KG PN T+ +I GL + + ++ ++L +M + G
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
Y +I R+ + L + MR+ + D T + N L + RLD +
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG-RLDKS 628
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 161/666 (24%), Positives = 294/666 (44%), Gaps = 62/666 (9%)
Query: 54 IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKL---GLAG 110
++S+ +SP H+ + D +AL W+S R++H+ +Y ++ L G G
Sbjct: 81 LKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 140
Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
V ++ L M+K +V +AL L ++N R + +KL + +N
Sbjct: 141 VVFKIRLL---MIKS-CDSVGDALYVLDLC----RKMNKDERFELK-----YKLIIGCYN 187
Query: 171 VVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
+L ++ + G D VY EM++ + PN+ T N ++ + +E A ++
Sbjct: 188 TLLNSLA--RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
+ G P+ T+ +I G +D + + EM G + YT +I LC +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
EA+ LF M+ + P TY LI LC + R +A +++++M G+ P + ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 350 RGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA 405
LC KF+++ L P +NAL+ C G A ++E M RK++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
+ ++N I+ C++ + KA +L +M+ V+PD TY++ + G+C+ N++ A R+
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCV 524
++ + LV D +Y+ +++ LC+ +++ EA ++F + + G + + + LI G C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 525 MRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEA 584
KVD+A ++L +ML + C +
Sbjct: 545 AGKVDEA-----------------------------------HLMLEKMLSKNCLPNSLT 569
Query: 585 YCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLV 644
+ LI + KLK+ L MVK GL P T L+H L S +++
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 645 SDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDS 704
S D+ Y I +EG A ++ M G PD T+ L+ ++
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY--GDLGQ 687
Query: 705 RRFAFD 710
FAFD
Sbjct: 688 TNFAFD 693
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 160/645 (24%), Positives = 285/645 (44%), Gaps = 29/645 (4%)
Query: 75 DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREA 133
DL SA K+F + + K + Y +I L +A ++E L M + +P VR
Sbjct: 268 DLDSAFKVFNEMPL-KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
+ L+ S R + A+ ++ M G K ++ + V++ ++ + + F + +M
Sbjct: 327 TV-LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK-FEKARELLGQM 384
Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRV 253
++ G++PNV T N L+ + IE A+D M + PN+RT+ +IKG S V
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNV 443
Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
++ +L +M + + ++ Y +I CR + A RL +M L+PD+ TY +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
I+ LC++ R+++A D+ + + G+ P ++ ++ G C+ GK DE+ LE
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 374 SPH----NALLECCCNAGKFFLAKCILEKMADRKIADCDSWN-IPIRWLCENEEIRKAYE 428
P+ NAL+ C GK A + EKM + S + I I L ++ + AY
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
+M+ S PD TY+ F+ C+ DA + ++ + D +YS L++G
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 489 QVEKITEAVEVFCCMSKNGCSLSSSSFNILI-------YG--------LCVMRKV---DK 530
+ + A +V M GC S +F LI YG LC M + D
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV-EGCALDVEAYCILI 589
+ L + +Y K++LG+ ++ + V M EG + + L+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 590 QSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV 649
+ K + A + M+ G +P E+ L+ GL + +S L+
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 650 LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
D + I+I+G+ K+GL L ++M G + T+ LL+
Sbjct: 864 EDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 200/492 (40%), Gaps = 63/492 (12%)
Query: 90 KRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVN 148
++ TY ++I K NV + G+ M++ + P+V SL+ +
Sbjct: 422 RKLSPNTRTYNELI-KGYCKSNVHKAMGVLNKMLERKVLPDVV-TYNSLIDGQCRSGNFD 479
Query: 149 GAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYL 208
A R+L MN G + ++ ++ + KR + ++ + + G+ PNV L
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR-VEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
++ + +++ A +M K C PNS TF +I GL A+ ++ ++ + +M +G+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
Q +S T +I L ++ + A F+ M + PD TY I C RL DA D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGK------------------------------- 357
++ M G++P + +++G ++G+
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 358 ----------------------FDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
FD V LE + +P + L+ C G +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 392 AKCILEKMA-DRKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
A+ + + M + I+ + +N + C+ ++ +A +++ M+ +P + +
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 450 LGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCS 509
G K E VF+ + D +++ +++G+ + + E+F M KNGC
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Query: 510 LSSSSFNILIYG 521
SS ++++LI G
Sbjct: 899 FSSQTYSLLIEG 910
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/619 (23%), Positives = 288/619 (46%), Gaps = 13/619 (2%)
Query: 81 KIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFS 140
++F S RF H + +L G G C V++ + VR + +
Sbjct: 3 RLFAISSTGNRFVH------RSLLGKGKCGTAPPSFSHCSFWVRD-FSGVRYDYRKISIN 55
Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
+N +++ A+ + +M S+ F+ +L AI + + F + + ++M GI
Sbjct: 56 RLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISH 114
Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
N+ T + L+ +++ AL +M K G P+ T ++ G +R+ D+VS++
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
G+M ++G Q + + +I L R N+ EA+ L M PD +TY ++N LC+
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----H 376
+D A +L+ M + P ++ I+ LC ++++N + P +
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
N+L+ C CN G++ A +L M +RKI + +++ I + ++ +A +L M+
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
S+ PD TYS+ + G C ++A +F + ++ + ++Y+ L++G C+ +++ E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
+E+F MS+ G ++ ++ LI+G R+ D A + S G TY+ ++
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
GL + + LVV + D+ Y I+I+ M + K++D F + G+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
+ T +++ G + ++ + + DS YN LI ++G + ++ L+
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 676 DLMLGKGWVPDATTHGLLV 694
M +V DA+T GL+
Sbjct: 595 REMRSCRFVGDASTIGLVT 613
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 132/561 (23%), Positives = 261/561 (46%), Gaps = 25/561 (4%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D V ++ +MVK+ P++ + LL + + N+ + + +M G N T+ I+I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
S++ ++++L +M LG + ++ ++ C N++ +A+ L M +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
PD T+ LI+ L + R +A +++ M+V G P + +V GLC+ G D +++
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
L+ P +N +++ CN A + +M ++ I + ++N IR LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
A LL M+ + P+ T+SA + K +A +++ ++ +S+ D +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
YS L+ G C +++ EA +F M C + ++N LI G C ++VD+ + L
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
G T TYT ++ G + + + +V QM+ +G D+ Y IL+ + K++
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDSSMY 655
+ F + ++ + PD T ++ G+ ++ L S K V + V Y
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV----TY 539
Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-----------EIDS 704
+++G ++GL +A L M +G +PD+ T+ L+ + + + E+ S
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Query: 705 RRFAFDSSSFPDSVSDILAEG 725
RF D+S+ V+++L +G
Sbjct: 600 CRFVGDASTI-GLVTNMLHDG 619
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 223/499 (44%), Gaps = 6/499 (1%)
Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
L+ F +++ A+ VL M G++ + N +L R +D V + +MV+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR-ISDAVSLVGQMVEM 180
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
G P+ T N L+ LF NR A+ RM KGC P+ T+ IV+ GL +D +
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
+S+L +M I+ + Y II LC + +A+ LF M + P+ +TY LI C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
LC R DA+ +L DMI + P F ++ + GK E+ ++ P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
+++L+ C + AK + E M + + ++N I+ C+ + + + EL
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
M +V + TY+ + G + ++A VF+Q+ + ++ D ++YS L++GLC
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
K+ A+ VF + ++ ++NI+I G+C KV+ L G TYT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
+M G + ++ + +M EG D Y LI++ A M
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 612 GLVPDRETMLSLLHGLADG 630
V D T+ + + L DG
Sbjct: 601 RFVGDASTIGLVTNMLHDG 619
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 175/422 (41%), Gaps = 13/422 (3%)
Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN-- 377
+L+LDDA ++ DM+ P+ F ++ + ++ KFD ++ E S HN
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLY 117
Query: 378 ---ALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRM 433
L+ C C + LA +L KM D + N + C I A L+G+M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKI 493
V PD T++ + G + +A+ + ++ + D ++Y +V GLC+ I
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 494 TEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
A+ + M + +N +I LC + V+ A+ L + + G TY +
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 554 MLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGL 613
+ L R D +L+ M+ +V + LI + ++ KL + ++ M+K +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 614 VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASY 673
PD T SL++G +L ++S + YN LI G K +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 674 LLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDS----SSFPDSVS-DILAEGLG 727
L M +G V + T+ L+ G E D+ + F PD ++ IL +GL
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 728 NT 729
N
Sbjct: 478 NN 479
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 161/648 (24%), Positives = 283/648 (43%), Gaps = 50/648 (7%)
Query: 91 RFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA 150
+F+ Y +I + + M L Q M + Y +L+ F RV+ A
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 151 MRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDTLNYLL 209
+ +L M S + ++NV + + K G D + + ++A G+ P+ T ++
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSF--GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
VL + NR++ A++ F + K P + + +I G + + D++ S+L G
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
+ Y CI+ L + K++EA+++F+ M+ D P+ TY LI+ LC +LD A ++
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHN----ALLECCCN 385
+ M GL P +V LC+ K DE+ E+ V +P +L++
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCEN--EEIRK--AYELLGRMVVSSVVPD 441
G+ A + EKM D +DC + +I L +N RK +++ M+ + PD
Sbjct: 460 VGRVDDAYKVYEKMLD---SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
+ ++ K E +F ++ A+ V D+ SYS L+ GL + E E+F
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
M + GC L + ++NI+I G C KV+KA +L + G T TY ++ GL K+
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
R + ++ + + L+V Y LI + ++ + L +++ GL P+ T
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 622 SLLHGLADGSQLH-----------------LVSSGI-----------NK-LVSDSEVLDS 652
SLL L +++ V+ GI NK V E+
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Query: 653 SM------YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
M Y +I+GL K G ++A L D G VPD+ + ++
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 164/709 (23%), Positives = 287/709 (40%), Gaps = 92/709 (12%)
Query: 51 EAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
E + +L P+ +I VL D++ A++ F+W + H ++Y ++L +
Sbjct: 53 ENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112
Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV-F 169
N + ++ ++L M+ GF SV+
Sbjct: 113 NFDALD-----------------------------------QILGEMSVAGFGPSVNTCI 137
Query: 170 NVVLGAIVEEK-RGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
+VLG + K R D V + M K P L+ N + L F++M
Sbjct: 138 EMVLGCVKANKLREGYDVV---QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
+ G P F +I+G RVD ++S+L EM + ++ Y I + K+
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
+ A + F + A L PDE+TY +I LC+ RLD+A ++ E + P + +
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI 404
+ G GKFDE+ + LE + + P +N +L C GK A + E+M
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 405 ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
+ ++NI I LC ++ A+EL M + + P+ T + V CK ++A +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI----- 519
F ++ + D I++ L++GL +V ++ +A +V+ M + C +S + LI
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 520 ----------------------------YGLCVM--------RKVDKAIRLRSLAYSSGT 543
Y C+ R + + I+ R +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA-- 552
Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
+Y+ ++ GL+K A + + M +GC LD AY I+I + K+
Sbjct: 553 ----RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
M G P T S++ GLA +L + S L+ +Y+ LI+G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV-GEEIDSRRFAFDS 711
K G +A +L+ ++ KG P+ T L+ + V EEI+ F S
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/581 (23%), Positives = 255/581 (43%), Gaps = 17/581 (2%)
Query: 59 HNLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
+ L PD +I VL N L A+++F+ + +R T Y MI+ G AG +
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFD 325
Query: 114 EMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVV 172
E L + K P+V A ++ +V+ A++V M ++ +N++
Sbjct: 326 EAYSLLERQRAKGSIPSVI-AYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNIL 383
Query: 173 LGAIVEEKRGFADFVFVYKE-MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK 231
+ + + G D F ++ M KAG+ PNV T+N +++ L ++ +++ A F M K
Sbjct: 384 IDMLC--RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 232 GCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEA 291
C P+ TF +I GL RVDD+ + +M D + YT +I + E+
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRG 351
+++K M + PD ++C+ + + + E++ P + ++ G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 352 LCEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-AD 406
L + G +E+ E C T +N +++ C GK A +LE+M +
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
++ I L + + + +AY L + + YS+ + G K+ ++A +
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 467 QVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMR 526
++ + L + +++ L++ L + E+I EA+ F M + C+ + ++ ILI GLC +R
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
K +KA G +T +YT ++ GL K + + + G D Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
+I+ +S N+ D F + GL +T + LL L
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/541 (21%), Positives = 247/541 (45%), Gaps = 9/541 (1%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
TY MI L A ++E + +++ K R A +++ + + + + A +L
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
+ G SV +N +L + K G D E +K PN+ T N L+++L +
Sbjct: 335 RAKGSIPSVIAYNCILTCL--RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM-FDLGIQLELSFYT 276
+++A + M K G PN RT I++ L + ++D++ ++ EM + + E++F +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
+I L + ++++A ++++ M D + + Y LI + R +D + I +DMI
Sbjct: 453 -LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
+P + + + + G+ ++ E+ P ++ L+ AG
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 393 KCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
+ M ++ + D ++NI I C+ ++ KAY+LL M P TY + + G
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
K+ ++A +F + ++ + L+ + YS L++G +V +I EA + + + G + +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
++N L+ L ++++A+ + TY ++ GL K+++ V
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
+M +G +Y +I +++ + + F+ G VPD +++ GL++G+
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 632 Q 632
+
Sbjct: 812 R 812
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 119/539 (22%), Positives = 227/539 (42%), Gaps = 53/539 (9%)
Query: 207 YLLEVLFETNRIESALDQFRRMHKK---GCCPNSRTFEIVIKGLIANSRVDDSV-SILGE 262
+++ VL + A++ FR ++ CP S +++ +A R D++ ILGE
Sbjct: 67 FVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV---MARCRNFDALDQILGE 123
Query: 263 MFDLGIQLELSFYTCIIPML--CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
M G ++ TCI +L + NKL E + +MMR P Y LI
Sbjct: 124 MSVAGFGPSVN--TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181
Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
D + + M +G PT +F ++RG + G+ D +++ L++ L
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241
Query: 381 ECCCNA----GKFFLA-KCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
C ++ GK +A K E A+ D ++ I LC+ + +A E+ +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
+ VP Y+ ++G +++A + + A+ + I+Y+ ++ L ++ K+ E
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
A++VF M K+ + S++NILI LC K+D A LR +G T ++
Sbjct: 362 ALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
L K Q+ + + +M + C D +C LI + + ++ D + M+ +
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 616 DRETMLSLL-----HGLA-DGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
+ SL+ HG DG +++ +++ + D + N ++ ++K G
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIY------KDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVSDILAEGLGN 728
+ G ++ EEI +RRF D+ S+ + ++ G N
Sbjct: 535 K------------------------GRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 151/612 (24%), Positives = 263/612 (42%), Gaps = 46/612 (7%)
Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
P+V + LI + ++ + ++ + M GF SV N +LG++V+ + +
Sbjct: 123 PSVYDILIRV---YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
F+ KEM+K I P+V T N L+ VL E + ++M K G P T+ V+
Sbjct: 180 FL-KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
R ++ +L M G+ ++ Y +I LCR N++ + L + MR + P+E
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVN--FL 365
+TY LIN ++ A+ +L +M+ GL+P F ++ G G F E++ ++
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 366 EDKCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEE 422
+ G S + LL+ C +F LA+ +M + ++ I LC+N
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 423 IRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY------------------------ 458
+ +A LL M + PD TYSA + G CK+ +
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 459 -----------EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
++A+R++ + + D +++ LV LC+ K+ EA E CM+ +G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
++ SF+ LI G + KA + G T TY ++ GL K ++
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
L + A+D Y L+ +M + L F MV+ ++PD T SL+ GL
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSS-MYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
+ + + + VL + MY ++G++K G Y + M G PD
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718
Query: 687 -ATTHGLLVGSS 697
TT+ ++ G S
Sbjct: 719 IVTTNAMIDGYS 730
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/535 (23%), Positives = 220/535 (41%), Gaps = 42/535 (7%)
Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV-SI 259
N + L+ V I+ +L+ FR M G P+ T ++ G + S D SV S
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL-GSVVKSGEDVSVWSF 180
Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
L EM I +++ + +I +LC E E++ L + M P +TY +++ C+
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
R A ++L+ M G+ + ++ LC + + L D + P
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 376 HNALLECCCNAGKFFLAKCILEKM---------------ADRKIADCD------------ 408
+N L+ N GK +A +L +M D I++ +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 409 ---------SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
S+ + + LC+N E A RM + V TY+ + G CK +
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
+A+ + ++S + D ++YS L+ G C+V + A E+ C + + G S + ++ LI
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
Y C M + +AIR+ G + T+ ++ L K + + + M +G
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
+ ++ LI + F+ M K G P T SLL GL G L
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ L + +D+ MYN L+ + K G ++A L M+ + +PD+ T+ L+
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 216/508 (42%), Gaps = 21/508 (4%)
Query: 233 CCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEE 290
C N ++I+I+ + + DS+ I M G S YTC I+ + + +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNP--SVYTCNAILGSVVKSGEDVS 176
Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
K M + PD T+ LIN LC + ++ +++ M G PT + ++
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 351 GLCEVGKFDESVNFLE---------DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD 401
C+ G+F ++ L+ D C Y N L+ C + + +L M
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTY-----NMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 402 RKIADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYED 460
R I + ++N I ++ A +LL M+ + P+ T++A + G N+++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
AL++F + A+ L +SY L++GLC+ + A + M +NG + ++ +I
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
GLC +D+A+ L + G TY+ ++ G K+ R K ++ ++ G +
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
+ Y LI + LK+ + M+ G D T L+ L ++ +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVGSSVG 699
+ SD + ++ ++ LING G +A + D M G P T+G LL G G
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 700 EEI-DSRRFAFDSSSFPDSVSDILAEGL 726
+ ++ +F + P +V ++ L
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/548 (21%), Positives = 239/548 (43%), Gaps = 29/548 (5%)
Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
M GI+PN + + L+ + A F M K G P T+ ++KGL
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593
Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
+ ++ L + + ++ Y ++ +C+ L +A+ LF M ++PD TY
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653
Query: 313 LINCLCENLRLDDANDILEDMIVIG-LTPTDDVFVDIVRGLCEVGKFDESVNFLE--DKC 369
LI+ LC + A ++ G + P ++ V G+ + G++ + F E D
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 370 GYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
G+ NA+++ GK +L +M ++ + ++NI + + +++ +
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
+ L ++++ ++PD T + VLG C+ E L++ + + + +D +++ L+
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833
Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
C +I A ++ M+ G SL + + ++ L + ++ + G S
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893
Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
+ Y ++ GL ++ K VV +M+ A +++++++ K + L
Sbjct: 894 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953
Query: 607 VMVKAGLVPDRETMLSLLH------GLADGSQLHLVSS--GINKLVSDSEVLDSSMYNIL 658
M+K LVP + +L+H + + +L +V S G+ LD YN+L
Sbjct: 954 FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK--------LDLVSYNVL 1005
Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSV 718
I GL +G + A L + M G G++ +ATT+ L+ + +R AF + +
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI-----RGLLARETAFSGADII--L 1058
Query: 719 SDILAEGL 726
D+LA G
Sbjct: 1059 KDLLARGF 1066
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 171/401 (42%), Gaps = 14/401 (3%)
Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG 246
+F + + ++PN ++ +F+ + ++ + +M G P+ T +I G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 247 LIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPD 306
+++ + +L EM + L+ Y ++ + + + L++ + ++PD
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
+LT L+ +CE+ L+ IL+ I G+ F ++ C G+ +N+
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE----INWAF 844
Query: 367 DKCGYVTSPHNALLECCCNA--------GKFFLAKCILEKMADRKIADCDSWNIP-IRWL 417
D +TS +L + C+A +F ++ +L +M+ + I+ I I L
Sbjct: 845 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
C +I+ A+ + M+ + P SA V K ++A + R + LV
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
S++ L+ C+ + EA+E+ MS G L S+N+LI GLC + A L
Sbjct: 965 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024
Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRA-KDLLVVLAQMLVEG 577
G +TY ++ GL+ + A ++L +L G
Sbjct: 1025 MKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1065
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 1/206 (0%)
Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
+N A ++ M S G L D + ++ + R F + V EM K GI P
Sbjct: 840 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR-FQESRMVLHEMSKQGISPESRKYI 898
Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
L+ L I++A M CP + +++ L + D++ +L M +
Sbjct: 899 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958
Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
+ ++ +T ++ + C+ + EA+ L +M L D ++Y LI LC + A
Sbjct: 959 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018
Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGL 352
++ E+M G + ++RGL
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGL 1044
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 246/548 (44%), Gaps = 25/548 (4%)
Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
++ A+ ++ + GF V +N VL A + KR + V+KEM+++ + PNV T N
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
L+ I+ AL F +M KGC PN T+ +I G ++DD +L M
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
G++ L Y +I LCRE +++E + M DE+TY LI C+ A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLEC 382
+ +M+ GLTP+ + ++ +C+ G + ++ FL+ P + L++
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 383 CCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPD 441
G A +L +M D + ++N I C ++ A +L M + PD
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 442 CATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFC 501
+YS + G C+ + ++ALRV R++ + + D+I+YS L++G C+ + EA +++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 502 CMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQ 561
M + G ++ LI C+ ++KA++L + G TY+ ++ GL K
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 562 RAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETML 621
R ++ +L ++ E Y LI++ S N+ K +++
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCS------------NIEFK--------SVV 609
Query: 622 SLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGK 681
SL+ G + ++ + D + YNI+I+G + G +A L M+
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 682 GWVPDATT 689
G++ T
Sbjct: 670 GFLLHTVT 677
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 209/485 (43%), Gaps = 46/485 (9%)
Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR-VDDSVSILGEMFDLGIQLELSFYT 276
I+ AL G P ++ V+ I + R + + ++ EM + + + Y
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
+I C ++ A+ LF M +P+ +TY LI+ C+ ++DD +L M +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCIL 396
GL P + ++ GLC G+ E V+F +L
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKE-VSF------------------------------VL 298
Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
+M R + D ++N I+ C+ +A + M+ + P TY++ + CK
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
N A+ Q+ + L + +Y+ LV+G Q + EA V M+ NG S S ++
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
N LI G CV K++ AI + G S +Y+ ++ G + + L V +M+
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG------LAD 629
+G D Y LIQ EQ + K+ + M++ GL PD T +L++ L
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP-DAT 688
QLH N++V + D Y++LINGL K+ T +A LL + + VP D T
Sbjct: 539 ALQLH------NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 689 THGLL 693
H L+
Sbjct: 593 YHTLI 597
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 159/355 (44%), Gaps = 22/355 (6%)
Query: 98 TYCKMILKLGLAGNVEE-MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
TY +I + AGN+ ME L Q V+ PN R +LV F +N A RVL
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER-TYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 157 MNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
MN GF SV +N ++ G V K D + V ++M + G+ P+V + + +L +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGK--MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
++ AL R M +KG P++ T+ +I+G R ++ + EM +G+ + Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
T +I C E LE+A++L M ++PD +TY LIN L + R +A +L +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
P+D + ++ C +F V +L++ C G A +
Sbjct: 584 EESVPSDVTYHTLIEN-CSNIEFKSVV---------------SLIKGFCMKGMMTEADQV 627
Query: 396 LEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFV 449
E M D ++NI I C +IRKAY L MV S + T A V
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 244/535 (45%), Gaps = 12/535 (2%)
Query: 140 SFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE-MVKAGI 198
+F +V A+++ M G +V FN V+ + G D F++KE MV+ G+
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL--GMCGRYDEAFMFKEKMVERGM 339
Query: 199 VPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVS 258
P + T + L++ L RI A + M KKG PN + +I I ++ ++
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 259 ILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLC 318
I M G+ L S Y +I C+ + + A RL K M ++ ++ ++ +I LC
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 319 ENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV----NFLEDKCGYV-- 372
+L D A + +M++ ++P + ++ GLC+ GK +++ FL G+V
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVD 517
Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
T NALL C AGK A I +++ R + D S+N I C +++ +A+ L
Sbjct: 518 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 577
Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
MV + PD TYS + G + E+A++ + ++ D +YS +++G C+ E
Sbjct: 578 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637
Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
+ E E F M ++ +N LI C ++ A+ LR G S ++TYT
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
++ G+ + R ++ ++ +M +EG +V Y LI + ++ M
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757
Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
+ P++ T ++ G A + S +N++ V DS Y I G K+G
Sbjct: 758 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 226/523 (43%), Gaps = 36/523 (6%)
Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
G VEE V ++ +M +AG+ PNV T N +++ L R + A +M ++G
Sbjct: 286 GGKVEEA------VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
P T+ I++KGL R+ D+ +L EM G + Y +I L +AI
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
+ +M + L TY LI C+N + D+A +L++M+ IG F ++ LC
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 354 EVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP 413
FD ++ F+ + SP LL
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTL------------------------------ 489
Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
I LC++ + KA EL + + V D T +A + G C+ ++A R+ +++ +
Sbjct: 490 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 549
Query: 474 VLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIR 533
V+D +SY+ L+ G C +K+ EA M K G + +++ILI GL M KV++AI+
Sbjct: 550 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 609
Query: 534 LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
+G TY+ ++ G K +R ++ +M+ + + Y LI++
Sbjct: 610 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 669
Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
+L M G+ P+ T SL+ G++ S++ ++ + +
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729
Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
Y LI+G K G + LL M K P+ T+ +++G
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 772
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 229/499 (45%), Gaps = 13/499 (2%)
Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL---GIQLELSFYTC 277
ALD F + KG P+ T I++ L+ + E FD+ G+ ++ +T
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCC----EAFDVVCKGVSPDVYLFTT 278
Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
I C+ K+EEA++LF M + P+ +T+ +I+ L R D+A E M+ G
Sbjct: 279 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 338
Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAK 393
+ PT + +V+GL + ++ L++ P +N L++ AG A
Sbjct: 339 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 398
Query: 394 CILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
I + M + ++ ++N I+ C+N + A LL M+ + ++++ +
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458
Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
C ++ ALR ++ +++ + L+ GLC+ K ++A+E++ G + +
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
+ N L++GLC K+D+A R++ G +Y ++ G ++ + + L +
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578
Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
M+ G D Y ILI + NK+++ F++ + G++PD T ++ G +
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH-G 691
++++S + ++ +YN LI + G S A L + M KG P++ T+
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 692 LLVGSSVGEEIDSRRFAFD 710
L+ G S+ ++ + F+
Sbjct: 699 LIKGMSIISRVEEAKLLFE 717
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 201/445 (45%), Gaps = 17/445 (3%)
Query: 64 DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
++LI L+ A++I K + + K T+ TY +I G + E L + M+
Sbjct: 382 NNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440
Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMR-----VLVNMNSGGFKLSVDVFNVVLGAIVE 178
+ + + S++ +H + A+R +L NM+ GG L+ ++ G
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT----LISGLCKH 496
Query: 179 EKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
K A + ++ + + G V + T N LL L E +++ A + + +GC +
Sbjct: 497 GKHSKA--LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 554
Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
++ +I G ++D++ L EM G++ + Y+ +I L NK+EEAI+ +
Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614
Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
+ ++PD TY +I+ C+ R ++ + ++M+ + P V+ ++R C G+
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 674
Query: 359 DESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIP 413
++ ED SP++A L++ + AK + E+M + + +
Sbjct: 675 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734
Query: 414 IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSL 473
I + ++ K LL M +V P+ TY+ + G + N +A R+ ++ + +
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794
Query: 474 VLDSISYSKLVEGLCQVEKITEAVE 498
V DSI+Y + + G + + EA +
Sbjct: 795 VPDSITYKEFIYGYLKQGGVLEAFK 819
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/653 (23%), Positives = 290/653 (44%), Gaps = 29/653 (4%)
Query: 61 LSPDHLIRVLDN-TNDLSSALKIFKWVSIQ-KRFQHTADTYCKMILKLGLAGNVEEMEGL 118
L+P ++ VL NDL+ + + F+HT+ + MI L +G + + +
Sbjct: 76 LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 135
Query: 119 CQNMVKERYPNVREALISL-----------------VFSFVNHYRVNGAMRVLVNMNSGG 161
M++ + E + SL + ++V ++ A + S G
Sbjct: 136 LLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 195
Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNVDTLNYLLEVLFETNRIES 220
F +S+D N ++G++V + G+ + + VY+E+ ++G+ NV TLN ++ L + ++E
Sbjct: 196 FTVSIDACNALIGSLV--RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 221 ALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIP 280
++ +KG P+ T+ +I + ++++ ++ M G + Y +I
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 281 MLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTP 340
LC+ K E A +F M L PD TY L+ C+ + + + DM + P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLAKCIL 396
F ++ G D+++ + P N L++ C G +A +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 397 EKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
+M + A D ++N + LC+ + + +A +L M ++ PD T + + G CKL
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
N ++A+ +F+++ + + LD ++Y+ L++G +V I A E++ M + S+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
+IL+ LC + +A R+ S T ++ G + A D L +M+
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 576 EGCALDVEAYCILIQS-MSEQNKLKDCALFFNVMV-KAGLVPDRETMLSLLHGLADGSQL 633
EG D +Y LI + E+N K L + + GLVPD T S+LHG +Q+
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
+ K++ D S Y +ING + ++A + D ML +G+ PD
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/510 (19%), Positives = 213/510 (41%), Gaps = 32/510 (6%)
Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
N + L+ + ++ A + F + KG + +I L+ V+ + +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
E+ G+ + + ++ LC++ K+E+ ++ + PD +TY LI+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
+++A +++ M G +P + ++ GLC+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK-------------------------- 317
Query: 381 ECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
GK+ AK + +M ++ D ++ + C+ ++ + ++ M VV
Sbjct: 318 -----HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV 372
Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
PD +S+ + + N + AL F V L+ D++ Y+ L++G C+ I+ A+ +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
M + GC++ ++N +++GLC + + +A +L + + T T ++ G K
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
L ++ + + +M + LDV Y L+ + + + MV ++P +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
L++ L L ++++S + + N +I G + G S L+ M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 680 GKGWVPDATTHGLLVGSSVGEEIDSRRFAF 709
+G+VPD ++ L+ V EE S+ F
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 6/236 (2%)
Query: 75 DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV-KERYPNVREA 133
+L +A+++F+ + +KR + TY ++ G G+++ + + +MV KE P
Sbjct: 495 NLQNAMELFQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEM 193
I LV + + + A RV M S K +V + N ++ F+ K M
Sbjct: 554 SI-LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK-M 611
Query: 194 VKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKK--GCCPNSRTFEIVIKGLIANS 251
+ G VP+ + N L+ + A ++M ++ G P+ T+ ++ G +
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
++ ++ +L +M + G+ + S YTC+I ++ L EA R+ M PD+
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 108/248 (43%), Gaps = 10/248 (4%)
Query: 97 DTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
D +CK+ GN++ L Q M ++R +L+ F ++ A + +
Sbjct: 488 DGHCKL-------GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
M S + +++++ A+ K A+ V+ EM+ I P V N +++ +
Sbjct: 541 MVSKEILPTPISYSILVNALCS-KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL--GIQLELSF 274
+M +G P+ ++ +I G + + + ++ +M + G+ ++
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
Y I+ CR+N+++EA + + M + PD TY +IN L +A I ++M+
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 335 VIGLTPTD 342
G +P D
Sbjct: 720 QRGFSPDD 727
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 75 DLSSALKIFKWVS-IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREA 133
D+ +A +I W + K T +Y ++ L G++ E + M+ + N++
Sbjct: 530 DIDTAKEI--WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK---NIKPT 584
Query: 134 LI---SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
++ S++ + + L M S GF +N ++ V E+ F V
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 191 K-EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
K E + G+VP+V T N +L N+++ A R+M ++G P+ T+ +I G ++
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 250 NSRVDDSVSILGEMFDLGIQLELSF 274
+ ++ I EM G + F
Sbjct: 705 QDNLTEAFRIHDEMLQRGFSPDDKF 729
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 256/536 (47%), Gaps = 8/536 (1%)
Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
S+ F+ +L AI + + F + + ++M GI N T + L+ +++ AL
Sbjct: 80 SIIEFSKLLSAIAKMNK-FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
+M K G PN T ++ G + R+ ++V+++ +MF G Q + +I L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
NK EA+ L M A PD +TY ++N LC+ D A ++L M L P +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
+ I+ GLC+ D+++N ++ P +++L+ C CN G++ A +L M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
+RKI D +++ I + ++ +A +L MV S+ P TYS+ + G C +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
+A ++F + ++ D ++Y+ L++G C+ +++ E +EVF MS+ G ++ ++NILI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
GL D A + S G TY ++ GL K + + +VV +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 580 LDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
+ Y I+I+ M + K++D LF N+ +K G+ PD +++ G +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
++ D + +S YN LI ++G ++ L+ M G+ DA+T GL+
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 204/483 (42%), Gaps = 5/483 (1%)
Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
+++ A+ F M K P+ F ++ + ++ D +S+ +M +LGI Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
+I CR ++L A+ + M L P+ +T L+N C + R+ +A +++ M V
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
G P F ++ GL K E++ ++ P + ++ C G LA
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
+L KM K+ +N I LC+ + + A L M + P+ TYS+ +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 452 KCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLS 511
C + DA R+ + + + D ++S L++ + K+ EA +++ M K S
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 512 SSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
+++ LI G C+ ++D+A ++ S TY ++ G K +R ++ + V
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
+M G + Y ILIQ + + F MV G+ P+ T +LL GL
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
+L L YNI+I G+ K G L + KG PD +
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 692 LLV 694
++
Sbjct: 541 TMI 543
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 145/325 (44%), Gaps = 5/325 (1%)
Query: 51 EAKIQSLRHNL-SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLA 109
E + + +R N+ + LI L N S A ++ + I+++ T+ +I
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKE 339
Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
G + E E L MVK SL+ F H R++ A ++ M S V +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
N ++ + KR + + V++EM + G+V N T N L++ LF+ + A + F+ M
Sbjct: 400 NTLIKGFCKYKR-VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
G PN T+ ++ GL N +++ ++ + + ++ + Y +I +C+ K+E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 290 EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIV 349
+ LF + + PD + Y +I+ C ++A+ + ++M G P + ++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 350 RGLCEVGKFDESVNFLED--KCGYV 372
R G + S +++ CG+
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFA 603
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 41/266 (15%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
TY +I + ++E + + + MV + +P+V +L+ F + RV M V
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV-VTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVF-VYKEMVKAGIVPNV------------- 202
M+ G + +N+++ + + G D ++KEMV G+ PN+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQA--GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 203 ----------------------DTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTF 240
T N ++E + + ++E D F + KG P+ +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
+I G +++ ++ EM + G Y +I R+ E + L K MR+
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 301 LDLMPDELTYEELINCLCENLRLDDA 326
D T + N L + RLD +
Sbjct: 600 CGFAGDASTIGLVTNMLHDG-RLDKS 624
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 149/643 (23%), Positives = 295/643 (45%), Gaps = 11/643 (1%)
Query: 60 NLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
+LSP H++++L + + +A +F + + H+A Y ++ +L V + +
Sbjct: 7 SLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV 66
Query: 120 QNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNS-GGFKLSVDVFNVVLGAIVE 178
+ + + + +S++ ++ + + A+ V M G + ++ +N +L A VE
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 179 EKRGF-ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNS 237
K+ + +F Y E AG+ PN+ T N L+++ + E A M K+G P+
Sbjct: 127 AKQWVKVESLFAYFET--AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-K 296
++ VI L ++DD++ + EM + G+ +++ Y +I +E + A+ L+ +
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
++ + P+ T+ +I+ L + R+DD I E M + ++ GLC+ G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 357 KFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNI 412
D++ + E K +N +L C GK + + M + + S+NI
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI 364
Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
I+ L EN +I +A + M D TY F+ G C AL V ++V +
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA- 531
LD +Y+ +++ LC+ +++ EA + MSK+G L+S N LI GL ++ +A
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
LR + +G T +Y ++ GL K + + + +ML G D++ Y IL+
Sbjct: 485 FFLREMG-KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
+ K+ ++ +++GL D L+HGL +L + + + + +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 652 SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
YN L+ G +K G +++A+ + M G PD ++ ++
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 202/461 (43%), Gaps = 32/461 (6%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
T+ MI L G V++ + + M + SL+ + V+ A V +
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
+ + V +N +LG + + + +++ M V N+ + N L++ L E +
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGK-IKESLELWRIMEHKNSV-NIVSYNILIKGLLENGK 374
Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
I+ A +R M KG + T+ I I GL N V+ ++ ++ E+ G L++ Y
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIG 337
II LC++ +LEEA L K M + + LI L + RL +A+ L +M G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILE 397
PT + ++ GLC+ GKF E+ F+++ +LE N K
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKE-----------MLE---NGWK--------- 531
Query: 398 KMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
D +++I + LC + +I A EL + + S + D ++ + G C +
Sbjct: 532 -------PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
+DA+ V + ++ + ++Y+ L+EG +V A ++ M K G S+N
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
++ GLC+ R V A+ A + G T T+ ++ +V
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 5/439 (1%)
Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
F D + ++ MV + +P++ LL V+ + NR + + F +M G P T I
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
V+ + +S+ + LG+M LG + +L +T ++ C N++E+AI LF + +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
P+ +TY LI CLC+N L+ A ++ M G P + +V GLCE+G++ ++
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 363 NFLEDKCGYVTSPH----NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
L D P+ AL++ GK AK + M + D ++ I L
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
C + +A ++ M + P+ Y+ + G CK ED +++F ++S + +V ++
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
I+Y+ L++G C V + A EVF MS ++N+L+ GLC KV+KA+ +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
TYT I+ G+ KL + +D + + +G +V Y +I +
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 598 LKDCALFFNVMVKAGLVPD 616
+ + F M + G +P+
Sbjct: 484 IHEADSLFKKMKEDGFLPN 502
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 192/456 (42%), Gaps = 30/456 (6%)
Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
++ +++ + N + +D++ + M + +T ++ ++ + N+ + I LF+ M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
+ L + P T +++C+C + + A+ L M+ +G P F ++ G C +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 359 DESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLC 418
++++ + G P + ++ IR LC
Sbjct: 170 EDAIALFDQILGMGFKP------------------------------NVVTYTTLIRCLC 199
Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
+N + A EL +M + P+ TY+A V G C++ + DA + R + + + + I
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
+++ L++ +V K+ EA E++ M + ++ LI GLC+ +D+A ++ L
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
+G YT ++ G K +R +D + + +M +G + Y +LIQ +
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
FN M PD T LL GL ++ + ++ Y I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
I G+ K G A L + KG P+ T+ ++
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 122/259 (47%), Gaps = 3/259 (1%)
Query: 88 IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVK-ERYPNVREALISLVFSFVNHYR 146
+++R + T+ +I G + E + L M++ YP+V SL+ +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV-FTYGSLINGLCMYGL 308
Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
++ A ++ M G + ++ ++ + KR D + ++ EM + G+V N T
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR-VEDGMKIFYEMSQKGVVANTITYT 367
Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
L++ R + A + F +M + P+ RT+ +++ GL N +V+ ++ I M
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
+ + + YT II +C+ K+E+A LF + + + P+ +TY +I+ C + +A
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 327 NDILEDMIVIGLTPTDDVF 345
+ + + M G P + V+
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 86 VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNH 144
V IQ TY +I L + G ++E + M + YPN +L+ F
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN-EVIYTTLIHGFCKS 341
Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAGIVPNVD 203
RV M++ M+ G + + V++ G + + A VF +M P++
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF--NQMSSRRAPPDIR 399
Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
T N LL+ L ++E AL F M K+ N T+ I+I+G+ +V+D+ + +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
F G++ + YT +I CR + EA LFK M+ +P+E Y+
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 257/536 (47%), Gaps = 8/536 (1%)
Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
S+ FN +L A+ + + F + + ++M GI ++ T + + +++ AL
Sbjct: 82 SIVEFNKLLSAVAKMNK-FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
+M K G P+ T ++ G + R+ D+V+++ +M ++G + + +T +I L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
NK EA+ L M PD +TY ++N LC+ +D A +L+ M + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
+ I+ GLC+ D+++N + P +++L+ C CN G++ A +L M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
+RKI + +++ I + ++ +A +L M+ S+ PD TYS+ + G C +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
+A +F + ++ + ++YS L++G C+ +++ E +E+F MS+ G ++ ++ LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
+G R D A + S G TY ++ GL K + +VV +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 580 LDVEAYCILIQSMSEQNKLKD-CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
D+ Y I+I+ M + K++D LF N+ +K G+ P+ +++ G S
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ K+ D + +S YN LI ++G ++ L+ M G+ DA+T GL+
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/605 (23%), Positives = 260/605 (42%), Gaps = 82/605 (13%)
Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
+R FA Y+E+++ N L +++ +++ A+D F M K P+
Sbjct: 40 ERSFASASGDYREILR----------NRLSDII----KVDDAVDLFGDMVKSRPFPSIVE 85
Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
F ++ + ++ + +S+ +M LGI +L Y+ I CR ++L A+ + M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
L PD +T L+N C + R+ DA +++ M+ +G P F ++ GL K
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPI 414
E+V ++ P + ++ C G LA +L+KM KI AD +N I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR----------- 463
LC+ + + A L M + PD TYS+ + C + DA R
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 464 ------------------------VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
++ ++ +S+ D +YS L+ G C +++ EA +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
F M C + +++ LI G C ++V++ + L G T TYT ++ G +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
+ + +V QM+ G ++ Y IL+ + + KL + F + ++ + PD T
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 620 MLSLLHGL------ADGSQL--HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
++ G+ DG +L +L G++ V YN +I+G ++G +A
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV--------IAYNTMISGFCRKGSKEEA 557
Query: 672 SYLLDLMLGKGWVPDATTHGLLVGSSVGE-----------EIDSRRFAFDSSSFPDSVSD 720
LL M G +P++ T+ L+ + + + E+ S FA D+S+ V++
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTN 616
Query: 721 ILAEG 725
+L +G
Sbjct: 617 MLHDG 621
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 2/229 (0%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
TY +I A VEE L + M + +L+ F + A V M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
S G ++ +N++L + + + A + V++ + ++ + P++ T N ++E + + +
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGK-LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTC 277
+E + F + KG PN + +I G +++ S+L +M + G Y
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 278 IIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
+I R+ E + L K MR+ D T + N L + RLD +
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG-RLDKS 626
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 219/485 (45%), Gaps = 34/485 (7%)
Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
A+ +L M G+ S+ N +L R ++ V + +MV+ G P+ T L+
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR-ISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
LF+ N+ A+ RM KGC P+ T+ VI GL D ++++L +M I+
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
++ Y+ +I LC+ +++A+ LF M + PD TY LI+CLC R DA+ +
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKF 389
L DM+ + P F N+L++ GK
Sbjct: 298 LSDMLERKINPNVVTF-------------------------------NSLIDAFAKEGKL 326
Query: 390 FLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
A+ + ++M R I + ++N I C ++ + +A ++ MV +PD TY+
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 449 VLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGC 508
+ G CK D + +FR +S + LV ++++Y+ L+ G Q A VF M +G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 509 SLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLV 568
+ ++N L+ GLC K++KA+ + S TY + G+ K + +D
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 569 VLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG-L 627
+ + ++G DV AY +I ++ ++ F M + G +PD T +L+ L
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 628 ADGSQ 632
DG +
Sbjct: 567 RDGDK 571
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 153/657 (23%), Positives = 296/657 (45%), Gaps = 71/657 (10%)
Query: 86 VSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHY 145
+S+ KRF H L+ G+ GL + +E+ R AL+ H
Sbjct: 1 MSLAKRFVHLRKASPSFCLR-GIY-----FSGLSYDGYREKLS--RNALL--------HL 44
Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA-GIVPNVDT 204
+++ A+ + M S+ F+ +L AI + K+ D V + E ++ G+ N+ T
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK--FDLVISFGEKMEILGVSHNLYT 102
Query: 205 LNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF 264
N ++ L +++ AL +M K G P+ T ++ G +R+ ++V+++ +M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 265 DLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLD 324
++G Q + +T ++ L + NK EA+ L + M PD +TY +IN LC+ D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 325 DANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALL 380
A ++L M + ++ ++ LC+ D+++N + P +++L+
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
C CN G++ A +L M +RKI + ++N I + ++ +A +L M+ S+
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
P+ TY++ + G C ++A ++F + ++ + D ++Y+ L+ G C+ +K+ + +E+
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
F MS+ G ++ ++ LI+G D A + S G TY ++ GL K
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
+ + +VV + D+ Y I+ + M + K++D F + G+ PD
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD--- 519
Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
YN +I+G K+GL +A L M
Sbjct: 520 --------------------------------VIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 680 GKGWVPDATTHGLLVGSSVGE-----------EIDSRRFAFDSSSFPDSVSDILAEG 725
G +PD+ T+ L+ + + + E+ S RFA D+S++ V+D+L +G
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDG 603
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/606 (23%), Positives = 260/606 (42%), Gaps = 47/606 (7%)
Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
R++ L N+ GF++ F +L + +KR V + M + G +PNV +
Sbjct: 102 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSY 161
Query: 206 NYLLEVLFETNRIESALDQFRRM---HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGE 262
N LL+ L + NR + AL+ M G P+ ++ VI G D + S E
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221
Query: 263 MFDLGIQLELSFYTCIIPMLCRENKLE--------------------------------- 289
M D GI ++ Y II LC+ ++
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 290 --EAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
EAI K MR+ + PD +TY L++ LC+N R +A I + M GL P +
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHN---ALLECC-CNAGKFFLAKCILEKMADRK 403
+++G G E L+ P + ++L C GK A + KM +
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 404 I-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
+ + ++ I LC++ + A +M+ + P Y++ + G C +E A
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGL 522
+ ++ + + L++I ++ +++ C+ ++ E+ ++F M + G + ++N LI G
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
C+ K+D+A++L S S G T TY+ ++ G K+ R +D LV+ +M G + D+
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581
Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
Y I++Q + + + + + ++G + T +LHGL
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641
Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL----VGSSV 698
L L++ +NI+I+ L K G +A L G VP+ T+ L+ +G +
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 699 GEEIDS 704
EE+D
Sbjct: 702 LEELDQ 707
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 234/518 (45%), Gaps = 40/518 (7%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC---CPNSRTFE 241
D V+ E+++ G ++ LN L + + +A+ ++ RM + G P+ T+
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADV-ARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRL-FKMMRA 300
I+I R+D + LG + G +++ +T ++ LC + + +A+ + + M
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMI--VIGLTPTDDV-FVDIVRGLCEVGK 357
L +P+ +Y L+ LC+ R +A ++L M G +P D V + ++ G + G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRW 416
D+ A +M DR I D ++N I
Sbjct: 212 SDK-------------------------------AYSTYHEMLDRGILPDVVTYNSIIAA 240
Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
LC+ + + KA E+L MV + V+PDC TY++ + G C ++A+ +++ + + D
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
++YS L++ LC+ + EA ++F M+K G +++ L+ G + + L
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
L +G ++ ++ K + ++V ++M +G + Y +I + +
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
+++D L+F M+ GL P SL+HGL ++ I +++ L++ +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+I+ KEG ++ L +LM+ G P+ T+ L+
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 185/370 (50%), Gaps = 8/370 (2%)
Query: 168 VFNVVLGAIVEEKRGFAD-FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
VF++++ A K+G D + V+ +M + G+ PN T ++ +L ++ R+E A+ F
Sbjct: 373 VFSILICAYA--KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
+M +G P + + +I GL ++ + + ++ EM D GI L F+ II C+E
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
++ E+ +LF++M + + P+ +TY LIN C ++D+A +L M+ +GL P +
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
++ G C++ + ++++ ++ SP +N +L+ + AK + ++ +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 403 KIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
+ ++NI + LC+N+ A ++ + + + + T++ + K+ ++A
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
+F S+ LV + +Y + E + + E ++F M NGC++ S N ++
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 730
Query: 522 LCVMRKVDKA 531
L ++ +A
Sbjct: 731 LLQRGEITRA 740
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/513 (21%), Positives = 214/513 (41%), Gaps = 41/513 (7%)
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
S++ + ++ AM VL M G +N +L + F+ K+M
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL-KKMRS 294
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
G+ P+V T + L++ L + R A F M K+G P T+ +++G + +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
+L M GI + ++ +I ++ K+++A+ +F MR L P+ +TY +I
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD---------------- 359
LC++ R++DA E MI GL+P + V+ ++ GLC K++
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 360 -------------------ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCIL 396
ES E P +N L+ C AGK A +L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 397 EKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
M + + +++ I C+ + A L M S V PD TY+ + G +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
A ++ +++ ++ +Y+ ++ GLC+ + +A+++F + L + +F
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
NI+I L + + D+A L S+G TY + ++ ++L + M
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVM 608
GC +D +++ + ++ ++ + +++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 232/508 (45%), Gaps = 40/508 (7%)
Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
+++K G P+ T + L+ L R+ AL+ RM + G P T ++ GL N
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
+V D+V ++ M + G Q Y ++ ++C+ + A+ L + M + D + Y
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
+I+ LC++ LD+A ++ +M + G ++ ++RG C G++D+ L D
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
+P +AL++C GK A+ + ++M R I+ D ++ I C+ ++ KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
+L MV P+ T++ + G CK +D L +FR++S + +V D+++Y+ L++G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
C++ K+ A E+F M S+ IL+ GLC + +KA+ + S
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
Y I+ G+ + D + + ++G DV+ Y I+I + ++ L + L F
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
M + G P+ T YNILI EG
Sbjct: 552 KMEEDGHSPNGCT-----------------------------------YNILIRAHLGEG 576
Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLV 694
++++ L++ + G+ DA+T ++V
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/513 (25%), Positives = 224/513 (43%), Gaps = 32/513 (6%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D V +++EM ++ P + + L V+ T + + LD ++M KG N T I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
++ + S +G++ LG + + ++ +I LC E ++ EA+ L M +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
P +T L+N LC N ++ DA +++ M+ G P +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE---------------------- 212
Query: 365 LEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEI 423
VT + +L+ C +G+ LA +L KM +RKI D ++I I LC++ +
Sbjct: 213 -------VT--YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
A+ L M + D Y+ + G C ++D ++ R + + + D +++S L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
++ + K+ EA E+ M + G S + ++ LI G C ++DKA + L S G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
T+ ++ G K D L + +M + G D Y LIQ E KL+
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 604 FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLW 663
F MV + PD + LL GL D + K+ LD +YNI+I+G+
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
A L + KG PD T+ +++G
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 242/519 (46%), Gaps = 42/519 (8%)
Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
K++ GI N+ TLN ++ + A ++ K G P++ TF +IKGL
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
+V ++V ++ M + G Q ++ Y I+ +CR A+ L + M ++ D TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
+I+ LC + +D A + ++M G+ + + +VRGLC+ GK+++ L+D
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 371 YVTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
P+ N LL+ GK A + ++M R I+ + ++N + C + +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
A +L MV + PD T+++ + G C + +D ++VFR +S + LV ++++YS LV+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
G CQ KI A E+F M +G ++ IL+ GLC K++KA+ +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI----------- 460
Query: 546 TTSTYTKIMLGLVKLQRAK-DLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
LQ++K DL +V+ Y +I+ M + K++D
Sbjct: 461 -----------FEDLQKSKMDLGIVM--------------YTTIIEGMCKGGKVEDAWNL 495
Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
F + G+ P+ T ++ GL L + + K+ D + YN LI +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
+G + ++ L++ M G+ DA++ +++ + E+D
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELD 594
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 199/411 (48%), Gaps = 8/411 (1%)
Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
A VL + G++ FN ++ + E + ++ V + MV+ G P+V T N ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK-VSEAVVLVDRMVENGCQPDVVTYNSIV 200
Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
+ + ALD R+M ++ + T+ +I L + +D ++S+ EM GI+
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
+ Y ++ LC+ K + L K M + +++P+ +T+ L++ + +L +AN++
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE----DKCGYVTSPHNALLECCCN 385
++MI G++P + ++ G C + E+ N L+ +KC +L++ C
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 386 AGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
+ + ++ R +A+ +++I ++ C++ +I+ A EL MV V+PD T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 445 YSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMS 504
Y + G C E AL +F + + L + Y+ ++EG+C+ K+ +A +FC +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 505 KNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRSLAYSSGTSYTTSTYTKIM 554
G + ++ ++I GLC + +A I LR + G + TY ++
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-EDGNAPNDCTYNTLI 550
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 218/519 (42%), Gaps = 22/519 (4%)
Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESAL------------DQFRRMHKKGCCPNSRTF 240
M+K I N+ L + L +T + + L F + C R
Sbjct: 2 MIKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRER-- 59
Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRA 300
++ I + + DD++++ EM L ++ + R + + K +
Sbjct: 60 ---LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL 116
Query: 301 LDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
+ + T +INC C + A +L ++ +G P F +++GL GK E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 361 SV----NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIR 415
+V +E+ C +N+++ C +G LA +L KM +R + AD +++ I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
LC + I A L M + TY++ V G CK + D + + + ++ +V
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
+ I+++ L++ + K+ EA E++ M G S + ++N L+ G C+ ++ +A +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
L + S T+T ++ G ++R D + V + G + Y IL+Q +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
K+K F MV G++PD T LL GL D +L L L MY
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+I G+ K G A L + KG P+ T+ +++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 231/507 (45%), Gaps = 27/507 (5%)
Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE-EKRGFADFVFVYKEMVKAGIV 199
FV R + A+ + M L++ FN+++ + K F+ + + ++ K G
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTKLGFQ 173
Query: 200 PNVDTLNYLLEVLFETNRIESALDQF---------------RRMHKKGCCPNSRTFEIVI 244
P+V T N LL L +RI AL F +M + G P TF +I
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
GL RV ++ +++ +M G+ +++ Y I+ +C+ + A+ L M +
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
PD + Y +I+ LC++ DA + +M+ G+ P + ++ G C G++ ++
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
L D +P NAL+ GK F A+ + ++M R I D ++N I C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
+ A + M PD T++ + C+ ++ +++ R++S + LV ++ +
Sbjct: 414 HNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
Y+ L+ G C+V+ + A ++F M +G + + NIL+YG C K+++A+ L +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
S T Y I+ G+ K + + + + + G DV+ Y ++I ++ +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHG 626
D + F+ M G PD T +L+ G
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/571 (21%), Positives = 243/571 (42%), Gaps = 59/571 (10%)
Query: 62 SPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEME-GLCQ 120
S H + LD+ A+ F ++ + F D C ++ + + N ++ L +
Sbjct: 79 SGSHYFKSLDD------AIDFFDYMVRSRPFYTAVD--CNKVIGVFVRMNRPDVAISLYR 130
Query: 121 NMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEK 180
M R P + L+ F + ++++ ++ + GF+ V FN +L + E
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 181 R--------------GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
R GF + V ++ +MV+ G+ P V T N L+ L R+ A
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
+M KG + T+ ++ G+ ++++L +M + I+ ++ Y+ II LC++
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT----- 341
+A LF M + P+ TY +I+ C R DA +L DMI + P
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 342 -------------------DD-----VFVDIVR------GLCEVGKFDESVNFLEDKCGY 371
D+ +F D V G C+ +FD++ + +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
N +++ C A + +L +++ R +A+ ++N I CE + + A +L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
M+ V PD T + + G C+ E+AL +F + + LD+++Y+ ++ G+C+
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
K+ EA ++FC + +G ++N++I G C + A L +G STY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
++ G +K + ++++M G + D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 22/252 (8%)
Query: 461 ALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIY 520
A+ ++R++ + + L+ S++ L++ C K++ ++ F ++K G +FN L++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
GLC+ ++ +A+ L Y T + + + + QM+ G
Sbjct: 185 GLCLEDRISEALAL--FGYMVETGFLEA------------------VALFDQMVEIGLTP 224
Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGI 640
V + LI + + ++ + A N MV GL D T ++++G+ + +
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 641 NKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS--SV 698
+K+ D +Y+ +I+ L K+G S A YL ML KG P+ T+ ++ S
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 699 GEEIDSRRFAFD 710
G D++R D
Sbjct: 345 GRWSDAQRLLRD 356
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 521 GLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL 580
G + +D AI S YT K++ V++ R + + +M + L
Sbjct: 80 GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139
Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL------- 633
++ ++ ILI+ + +KL F + K G PD T +LLHGL ++
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 634 -HLVSSG-------INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
++V +G +++V +N LINGL EG +A+ L++ M+GKG
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 686 DATTHGLLV 694
D T+G +V
Sbjct: 260 DVVTYGTIV 268
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 41/218 (18%)
Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI--VEEKRGFADFVFVYKEMVKAGIVPNVD 203
RV+ M++L ++ G + +N ++ V+ D +++EM+ G+ P+
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD---LFQEMISHGVCPDTI 503
Query: 204 TLNYLLEVLFETNRIESALDQFR--RMHK------------KGCC--------------- 234
T N LL E ++E AL+ F +M K G C
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 235 ------PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
P+ +T+ ++I G S + D+ + +M D G + + S Y +I + ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
+++I L MR+ D T + + + + + RLD +
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIKMVADLITDG-RLDKS 660
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 229/517 (44%), Gaps = 40/517 (7%)
Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
+++K G P+ N LL L R+ AL+ RM + G P T ++ GL N
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
+V D+V ++ M + G Q Y ++ ++C+ + A+ L + M ++ D + Y
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
+I+ LC++ LD+A ++ +M + G + ++ G C G++D+ L D
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 372 VTSPH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKA 426
SP+ + L++ GK A +L++M R IA + ++N I C+ + +A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
+++ M+ PD T++ + G CK +D L +FR++S + ++ ++++Y+ LV+G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
CQ K+ A ++F M S+ IL+ GLC +++KA+ + S
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
Y I+ G+ + D + + ++G LD AY I+I + ++ L + F
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
M + G PD T YNILI +
Sbjct: 568 KMTEEGHAPDELT-----------------------------------YNILIRAHLGDD 592
Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEID 703
+ A+ L++ M G+ D +T +++ E+D
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD 629
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/550 (23%), Positives = 252/550 (45%), Gaps = 17/550 (3%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D V ++++M+++ +P V N L + +T + E L ++M KG + T I+I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
++ + S +G++ LG + + + ++ LC E ++ EA+ L M +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
P +T L+N LC N ++ DA +++ M+ G P + + ++ +C+ G+ ++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 365 L----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
L E ++ +++ C G A + +M + AD ++N I C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
+LL M+ + P+ T+S + K +A ++ +++ + + ++I+
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
Y+ L++G C+ ++ EA+++ M GC +FNILI G C ++D + L
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 540 SSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
G T TY ++ G KL+ AK L +M+ D+ +Y IL+ + +
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKL---FQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
+L+ F + K+ + D + ++HG+ + S++ L LD+ YN
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFA-----FDS 711
I+I+ L ++ S+A L M +G PD T+ +L+ + +G++ D+ A S
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD-DATTAAELIEEMKS 606
Query: 712 SSFPDSVSDI 721
S FP VS +
Sbjct: 607 SGFPADVSTV 616
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 181/437 (41%), Gaps = 25/437 (5%)
Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF--- 364
L+Y + ++ ++ DDA D+ DMI PT F + + + +++ +
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 365 LEDKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
+E K G S + + ++ C C K A + K+ D +N + LC
Sbjct: 114 MESK-GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
+ +A EL+ RMV P T + V G C DA+ + ++ + ++Y
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
++ +C+ + A+E+ M + L + ++I+I GLC +D A L +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
G TY ++ G R D +L M+ + +V + +LI S ++ KL++
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
M++ G+ P+ T SL+ G ++L ++ ++S D +NILING
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLL-----------VGSSVGEEIDSRRFAFD 710
K L M +G + + T+ L V + +E+ SRR
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR-- 470
Query: 711 SSSFPDSVS-DILAEGL 726
PD VS IL +GL
Sbjct: 471 ----PDIVSYKILLDGL 483
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 88 IQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRV 147
I+++ T+ +I G + E + L + M++ SL+ F R+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 148 NGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNY 207
A++++ M S G + FN+++ + R D + +++EM G++ N T N
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANR-IDDGLELFREMSLRGVIANTVTYNT 443
Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM---- 263
L++ ++ ++E A F+ M + P+ +++I++ GL N ++ ++ I G++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 264 ------------------------FDL-------GIQLELSFYTCIIPMLCRENKLEEAI 292
+DL G++L+ Y +I LCR++ L +A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
LF+ M PDELTY LI + A +++E+M G P D V +V +
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINM 622
Query: 353 CEVGKFDES 361
G+ D+S
Sbjct: 623 LSSGELDKS 631
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 220/484 (45%), Gaps = 33/484 (6%)
Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
L+ F +++ A+ +L M G++ S+ + +L KR +D V + +MV+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEM 184
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
G P+ T L+ LF N+ A+ RM ++GC PN T+ +V+ GL +D +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
++L +M I+ + Y+ +I LC+ ++A+ LF M + P+ +TY LI+C
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH 376
LC R DA+ +L DMI + P F
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTF------------------------------- 333
Query: 377 NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
NAL++ GK A+ + ++M R I D +++ I C ++ + +A + M+
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
P+ TY+ + G CK ++ + +FR++S + LV ++++Y+ L+ G Q
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
A VF M +G + ++N L+ GLC K++KA+ + S T TY ++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
G+ K + +D + + ++G DV Y +I + ++ F M + G +P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 616 DRET 619
D T
Sbjct: 574 DSGT 577
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 232/510 (45%), Gaps = 5/510 (0%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D + ++ MVK+ +P++ N LL + + + + + +M + G N T+ I+I
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
S++ ++++LG+M LG + + + ++ C ++ +A+ L M +
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
PD +T+ LI+ L + + +A +++ M+ G P + +V GLC+ G D + N
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 365 LED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
L K ++ +++ C A + +M ++ + + +++ I LC
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
E A LL M+ + P+ T++A + K +A +++ ++ +S+ D +
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
YS L+ G C +++ EA +F M C + ++N LI G C +++D+ + L
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
G T TYT ++ G + + + +V QM+ +G ++ Y L+ + + KL+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
+ F + ++ + P T ++ G+ ++ L D +YN +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
+G ++GL +A L M G +PD+ T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 1/319 (0%)
Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
N LL KF L + EKM I+ + ++NI I C +I A LLG+M+
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
P T S+ + G C DA+ + Q+ D+I+++ L+ GL K +E
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIML 555
AV + M + GC + ++ +++ GLC +D A L + ++ Y+ ++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 556 GLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
L K + D L + +M +G +V Y LI + + D + + M++ + P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLL 675
+ T +L+ +L ++++ S D Y+ LING +A ++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 676 DLMLGKGWVPDATTHGLLV 694
+LM+ K P+ T+ L+
Sbjct: 389 ELMISKDCFPNVVTYNTLI 407
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
SL+ N+ R + A R+L +M +V FN ++ A V+E + + +Y EM+K
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK-LVEAEKLYDEMIK 358
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
I P++ T + L+ +R++ A F M K C PN T+ +I G R+D+
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
V + EM G+ YT +I + + A +FK M + + P+ +TY L++
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
LC+N +L+ A + E + + PT + ++ G+C+ GK ++
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 103/236 (43%)
Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
+DA+ +F + + ++KL+ + +++K + + M + G S + ++NIL
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
I C ++ A+ L G + T + ++ G +R D + ++ QM+ G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
D + LI + NK + + MV+ G P+ T +++GL + L +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 639 GINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+NK+ + + +Y+ +I+ L K A L M KG P+ T+ L+
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 144/649 (22%), Positives = 285/649 (43%), Gaps = 57/649 (8%)
Query: 102 MILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSF---VNHYRVNGAMR------ 152
MI K+ L V + L +VK R+ + L + + S + Y G +R
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241
Query: 153 -------VLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
++ +M + G +++ +NV++ + ++++ + + V + K++ + P+V T
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW-EAVGIKKDLAGKDLKPDVVTY 300
Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
L+ L + E L+ M P+ +++GL +++++++++ + D
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
G+ L Y +I LC+ K EA LF M + L P+++TY LI+ C +LD
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLE 381
A L +M+ GL + + ++ G C+ G + F+ + P + +L+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 382 CCCNAGKFFLAKCILEKMADRKIADC-DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
C+ GK A + +M + IA ++ + L IR A +L M +V P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
+ TY+ + G C+ + A ++++ + +V D+ SY L+ GLC + +EA
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
+ K C L+ + L++G C K+++A+ + G Y ++ G +K
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
+ K +L +M G D Y +I + S+ K+ +++M+ G VP+ T
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 621 LSLLHGLADG----------SQLHLVSSGINK--------LVSDSEV------------- 649
++++GL S++ VSS N+ +++ EV
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 650 ----LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+++ YN+LI G ++G +AS L+ M+G G PD T+ ++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 137/617 (22%), Positives = 261/617 (42%), Gaps = 83/617 (13%)
Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMV-KAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
F++++ V +R D V V+K M+ K ++P V TL+ LL L + A++ F
Sbjct: 159 FDLLIQHYVRSRR-VLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
M G P+ + VI+ L + + ++ M G + + Y +I LC++ K
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
+ EA+ + K + DL PD +TY L+ LC+ + +++++M+ + +P++
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRK 403
+V GL + GK +E++N ++ + SP +NAL++ C KF A+ + ++M
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 404 IADCD-SWNIPIRWLCENEEIRKAYELLGRMVVSSVV----------------------- 439
+ D +++I I C ++ A LG MV + +
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 440 ------------PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ---------------- 471
P TY++ + G C ALR++ +++ +
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 472 ---SLVLDS----------------ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
L+ D+ ++Y+ ++EG C+ +++A E M++ G +
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
S+ LI+GLC+ + +A + YT ++ G + + ++ L V +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNV---MVKAGLVPDRETMLSLLHGLAD 629
M+ G LD+ Y +LI K KD LFF + M GL PD S++ +
Sbjct: 638 MVQRGVDLDLVCYGVLIDG---SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
+ ++++ V + Y +INGL K G ++A L M VP+ T
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 690 HGLLVGSSVGEEIDSRR 706
+G + E+D ++
Sbjct: 755 YGCFLDILTKGEVDMQK 771
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/575 (21%), Positives = 251/575 (43%), Gaps = 53/575 (9%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
TYC ++ L E + M+ R+ A+ SLV ++ A+ ++ +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
G ++ V+N ++ ++ + R F + ++ M K G+ PN T + L+++ +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCK-GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 218 IESALDQFRRMHKKGC--------------C---------------------PNSRTFEI 242
+++AL M G C P T+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
++ G + +++ ++ + EM GI + +T ++ L R + +A++LF M +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
+ P+ +TY +I CE + A + L++M G+ P + ++ GLC G+ E+
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 363 NFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
F++ C + LL C GK A + ++M R + D + + I
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
++++ + + LL M + PD Y++ + K K ++++A ++ + + V +
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG--LCVMRK----VDKA 531
++Y+ ++ GLC+ + EA EV C + SS N + YG L ++ K + KA
Sbjct: 718 VTYTAVINGLCKAGFVNEA-EVLCSKMQP----VSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
+ L + A G T+TY ++ G + R ++ ++ +M+ +G + D Y +I
Sbjct: 773 VELHN-AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
+ +N +K +N M + G+ PDR +L+HG
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 209/454 (46%), Gaps = 18/454 (3%)
Query: 110 GNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVF 169
G++ EG M+ ++ SL+ + + ++N A+R+ M G S+ F
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 170 NVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
+L + D V ++ EM + + PN T N ++E E + A + + M
Sbjct: 511 TTLLSGLFRAGL-IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLE 289
+KG P++ ++ +I GL + ++ + + +L YT ++ CRE KLE
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 290 EAIRLFKMM--RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
EA+ + + M R +DL D + Y LI+ ++ +L++M GL P D ++
Sbjct: 630 EALSVCQEMVQRGVDL--DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 348 IVRGLCEVGKFDESVN----FLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD-R 402
++ + G F E+ + + C + A++ C AG A+ + KM
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 403 KIADCDSWNIPIRWLCENE-EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
+ + ++ + L + E +++KA EL ++ ++ + ATY+ + G C+ E+A
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEA 806
Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
+ ++ + D I+Y+ ++ LC+ + +A+E++ M++ G ++N LI+G
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 522 LCVMRKVDKAIRLRSLAYSSG------TSYTTST 549
CV ++ KA LR+ G TS TT++
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 163/660 (24%), Positives = 279/660 (42%), Gaps = 63/660 (9%)
Query: 62 SPDHL-IRVLDNTNDLSS------ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
SP+H I+ LD L AL FK ++ F+HT T+ MI KL + G V+
Sbjct: 35 SPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDS 94
Query: 115 MEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLG 174
++ L Q M + + + IS++ + A+ + + G SV ++N VL
Sbjct: 95 VQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLD 154
Query: 175 AIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCC 234
++ E R VY++M + G PNV T N LL+ L + N+++ A M KGCC
Sbjct: 155 TLLGENR-IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213
Query: 235 PNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLE--LSFYTCIIPMLCRENKLEEAI 292
P++ ++ VI + V ++ E +L + E +S Y +I LC+E+ + A
Sbjct: 214 PDAVSYTTVISSMC-------EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAF 266
Query: 293 RLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGL 352
L + M + P+ ++Y LIN LC + +++ A L M+ G P +V+G
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326
Query: 353 CEVGKFDESVNFLEDKC-GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWN 411
G ++++ G+ P + ++N
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQP------------------------------NVVAYN 356
Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
++ C + I KA + M P+ TY + + G K + + A+ ++ ++
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
+ + Y+ +VE LC+ K EA + MSK C+ S +FN I GLC ++D A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 532 IRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
++ R + TY +++ GL K R ++ + ++ + G Y L+
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 591 SMSEQNKLKDCAL-FFNVMVKAGLVPDRETMLSLL-----HGLAD--GSQLHLVSSGINK 642
S L AL M+ G PD TM ++ G A+ L LVS G K
Sbjct: 537 G-SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEI 702
D V+ Y +I GL + LL+ M+ G VP T +L+ + ++I
Sbjct: 596 WRPD--VIS---YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDI 650
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 215/441 (48%), Gaps = 5/441 (1%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D + ++ +MVK+ P++ N LL + + + + + ++M G + TF IVI
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
+V ++SILG+M LG + + ++ CR N++ +A+ L M +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
PD + Y +I+ LC+ R++DA D +++ G+ P + +V GLC ++ ++
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 365 LEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
L D +P ++ALL+ GK AK + E+M I D +++ I LC
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
++ I +A ++ MV + D +Y+ + G CK ED +++FR++S + LV ++++
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
Y+ L++G Q + +A E F M G S ++NIL+ GLC +++KA+ +
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
TYT ++ G+ K + ++ + + ++G D+ Y ++ + + L
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 600 DCALFFNVMVKAGLVPDRETM 620
+ + M + GL+ + T+
Sbjct: 488 EVEALYTKMKQEGLMKNDCTL 508
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 181/383 (47%), Gaps = 39/383 (10%)
Query: 145 YRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKEMVKAGIVPN 201
++V+ A+ +L M KL + V +G++V + +D V + +MV+ G P+
Sbjct: 134 FQVSLALSILGKM----LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 202 VDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
+ N +++ L +T R+ A D F+ + +KG PN T+ ++ GL +SR D+ +L
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
+M I + Y+ ++ + K+ EA LF+ M + + PD +TY LIN LC +
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 322 RLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLE 381
R+D+AN + + M+ G D+V +N L+
Sbjct: 310 RIDEANQMFDLMVSKG------CLADVV-------------------------SYNTLIN 338
Query: 382 CCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
C A + + +M+ R +++ ++N I+ + ++ KA E +M + P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
D TY+ + G C E AL +F + + + LD ++Y+ ++ G+C+ K+ EA +F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 501 CCMSKNGCSLSSSSFNILIYGLC 523
C +S G ++ ++ GLC
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLC 481
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 180/401 (44%), Gaps = 36/401 (8%)
Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
M+K Y R + SLV F RV+ A+ ++ M G+K + +N ++ ++ + KR
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 182 GFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFE 241
F F +KE+ + GI PNV T L+ L ++R A M KK PN T+
Sbjct: 206 VNDAFDF-FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 242 IVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRAL 301
++ + N +V ++ + EM + I ++ Y+ +I LC ++++EA ++F +M +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 302 DLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
+ D ++Y LIN C+ R++D + +M GL + +++G + G D++
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENE 421
F + SP D ++NI + LC+N
Sbjct: 385 QEFFSQMDFFGISP------------------------------DIWTYNILLGGLCDNG 414
Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
E+ KA + M + D TY+ + G CK E+A +F +S + L D ++Y+
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 482 KLVEGLCQVEKITEAVEVFCCMS-----KNGCSLSSSSFNI 517
++ GLC + E ++ M KN C+LS +
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL 515
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 175/420 (41%), Gaps = 40/420 (9%)
Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE--DK 368
E L +++L+DA D+ DM+ P+ F ++ + ++ K+D ++ + +
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 369 CGYVTSPH--NALLECCCNAGKFFLAKCILEKM------ADR--------------KIAD 406
G + N ++ C C + LA IL KM DR +++D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 407 CDS----------------WNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
S +N I LC+ + + A++ + + P+ TY+A V
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
G C + DA R+ + + + + I+YS L++ + K+ EA E+F M +
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
+++ LI GLC+ ++D+A ++ L S G +Y ++ G K +R +D + +
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
+M G + Y LIQ + + FF+ M G+ PD T LL GL D
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
+L + LD Y +I G+ K G +A L + KG PD T+
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 6/294 (2%)
Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
D ++NI I C ++ A +LG+M+ PD T + V G C+ DA+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
++ D ++Y+ +++ LC+ +++ +A + F + + G + ++ L+ GLC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCALDV 582
+ A RL S + TY+ ++ VK + AK+L + +M ++ D+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP---DI 295
Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
Y LI + +++ + F++MV G + D + +L++G ++ +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
+ V ++ YN LI G ++ G +A M G PD T+ +L+G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
D ++ LV G C+ ++++AV + M + G ++N +I LC ++V+ A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
G TYT ++ GL R D +L+ M+ + +V Y L+ + +
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
K+ + F MV+ + PD T SL++GL ++ + + +VS + D Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV-GSSVGEEIDSRRFAFDSSSF 714
N LING K L M +G V + T+ L+ G ++D + F F
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 715 PDSVSDI 721
DI
Sbjct: 394 FGISPDI 400
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 112/273 (41%)
Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
++ A +L MV S P ++ + KL Y+ + + +++ + D +++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
++ C +++ A+ + M K G + L+ G C +V A+ L
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
G Y I+ L K +R D ++ +G +V Y L+ + ++ D
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
A + M+K + P+ T +LL ++ ++V S D Y+ LING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
L +A+ + DLM+ KG + D ++ L+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 204/444 (45%), Gaps = 5/444 (1%)
Query: 195 KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVD 254
K G P+ T + L+ R+ A+ RM + P+ T +I GL RV
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 255 DSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELI 314
+++ ++ M + G Q + Y ++ LC+ A+ LF+ M ++ + Y +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 315 NCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS 374
+ LC++ DDA + +M + G+ + ++ GLC GK+D+ L + G
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 375 PH----NALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYEL 429
P +AL++ GK AK + +M R IA D ++N I C+ + +A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
MV PD TYS + CK +D +R+FR++S++ L+ ++I+Y+ LV G CQ
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
K+ A E+F M G S ++ IL+ GLC +++KA+ + S +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
Y I+ G+ + D + + +G DV Y ++I + ++ L + + F M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 610 KAGLVPDRETMLSLLHGLADGSQL 633
+ G PD T L+ GS L
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGL 576
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/548 (23%), Positives = 247/548 (45%), Gaps = 22/548 (4%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D + +++ M+++ +P N L + T + + L + M G + T I+I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
++ + S+LG + LG + + ++ ++ C E ++ EA+ L M +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
PD +T LIN LC R+ +A +++ M+ G P + + ++ LC+ G +++
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 365 L----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
E ++ +++ C G F A + +M + I AD +++ I LC
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
+ + ++L M+ +++PD T+SA + K +A ++ ++ + + D+I+
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
Y+ L++G C+ + EA ++F M GC +++ILI C ++VD +RL
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 540 SSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
S G T TY ++LG KL AK+L +M+ G V Y IL+ + +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELF---QEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
+L F M K+ + ++HG+ + S++ S L D YN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG-----------EEIDSR 705
++I GL K+G S+A L M G PD T+ +L+ + +G EE+
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 706 RFAFDSSS 713
F+ DSS+
Sbjct: 590 GFSADSST 597
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/512 (23%), Positives = 219/512 (42%), Gaps = 20/512 (3%)
Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
YKE ++ GIV ++ A+D F M + P F + +
Sbjct: 38 YKERLRNGIV---------------DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVAR 82
Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
+ D + M GI+ ++ T +I CR+ KL A + L PD +T
Sbjct: 83 TKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT 142
Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
+ L+N C R+ +A +++ M+ + P ++ GLC G+ E++ ++
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 370 GYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
Y P + +L C +G LA + KM +R I A ++I I LC++
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
A L M + + D TYS+ + G C ++D ++ R++ ++++ D +++S L+
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
+ + K+ EA E++ M G + + ++N LI G C + +A ++ L S G
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
TY+ ++ K +R D + + ++ +G + Y L+ + KL
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
F MV G+ P T LL GL D +L+ K+ L +YNI+I+G+
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
A L + KG PD T+ +++G
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 5/393 (1%)
Query: 307 ELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLE 366
+L+Y+E + +++++DA D+ E MI PT F + + ++D + F +
Sbjct: 35 KLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94
Query: 367 ----DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENE 421
+ + ++ C C K A +L + D +++ + C
Sbjct: 95 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154
Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
+ +A L+ RMV PD T S + G C +AL + ++ D ++Y
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 482 KLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS 541
++ LC+ A+++F M + S ++I+I LC D A+ L +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 542 GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC 601
G TY+ ++ GL + D +L +M+ DV + LI ++ KL +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 602 ALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILING 661
+N M+ G+ PD T SL+ G + LH + + +VS D Y+ILIN
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 662 LWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
K L + KG +P+ T+ LV
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 13/288 (4%)
Query: 162 FKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESA 221
F +DVF V G ++E K +Y EM+ GI P+ T N L++ + N + A
Sbjct: 318 FSALIDVF-VKEGKLLEAKE-------LYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 222 LDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPM 281
F M KGC P+ T+ I+I RVDD + + E+ G+ Y ++
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 282 LCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPT 341
C+ KL A LF+ M + + P +TY L++ LC+N L+ A +I E M +T
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 342 DDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILE 397
++ I+ G+C K D++ + P +N ++ C G A +
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 398 KMA-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
KM D D ++NI IR + + EL+ M V D +T
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 228/476 (47%), Gaps = 13/476 (2%)
Query: 109 AGNVEEMEGLCQNMVKERYPNVREAL--ISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSV 166
G +EE +NMV + NV + + +L+ F + A ++L + G V
Sbjct: 115 TGELEEGFKFLENMV--YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 167 DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFR 226
+NV++ + + + + + P+V T N +L L ++ +++ A++
Sbjct: 173 ITYNVMISGYCKA----GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 227 RMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCREN 286
RM ++ C P+ T+ I+I+ +S V ++ +L EM D G ++ Y ++ +C+E
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 287 KLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFV 346
+L+EAI+ M + P+ +T+ ++ +C R DA +L DM+ G +P+ F
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 347 DIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADR 402
++ LC G +++ LE + P +N LL C K A LE+M R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 403 K-IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDA 461
D ++N + LC++ ++ A E+L ++ P TY+ + G K A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 462 LRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYG 521
+++ ++ A+ L D+I+YS LV GL + K+ EA++ F + G ++ +FN ++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
LC R+ D+AI + G ++YT ++ GL AK+ L +L ++ +G
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 227/510 (44%), Gaps = 44/510 (8%)
Query: 186 FVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIK 245
F F+ + MV G VP++ L+ + A + G P+ T+ ++I
Sbjct: 122 FKFL-ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 246 GLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMP 305
G +++++S+L M + ++ Y I+ LC KL++A+ + M D P
Sbjct: 181 GYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 306 DELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL 365
D +TY LI C + + A +L++M G TP + +V G+C+ G+ DE++ FL
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 366 EDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCEN 420
D P HN +L C+ G++ A+ +L M + + ++NI I +LC
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 421 EEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISY 480
+ +A ++L +M P+ +Y+ + G CK + A+ ++ ++ D ++Y
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 481 SKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYS 540
+ ++ LC+ K+ +AVE+ +S GCS ++N +I GL K KAI+
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK------- 470
Query: 541 SGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKD 600
L+ RAKDL D Y L+ +S + K+ +
Sbjct: 471 ----------------LLDEMRAKDL------------KPDTITYSSLVGGLSREGKVDE 502
Query: 601 CALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILIN 660
FF+ + G+ P+ T S++ GL Q + +++ + + Y ILI
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
GL EG+ +A LL+ + KG + ++
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSSAE 592
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 183/383 (47%), Gaps = 16/383 (4%)
Query: 323 LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNA 378
L++ LE+M+ G P ++RG C +GK ++ LE G P +N
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 379 LLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSV 438
++ C AG+ A +L++M+ D ++N +R LC++ ++++A E+L RM+
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS--PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 439 VPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVE 498
PD TY+ + C+ A+++ ++ + D ++Y+ LV G+C+ ++ EA++
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 499 VFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLV 558
M +GC + + NI++ +C + A +L + G S + T+ ++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 559 K---LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVP 615
+ L RA D+L + Q GC + +Y L+ ++ K+ + MV G P
Sbjct: 356 RKGLLGRAIDILEKMPQ---HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 616 DRETMLSLLHGLADGSQLHLVSSGINKLVSD--SEVLDSSMYNILINGLWKEGLTSQASY 673
D T ++L L ++ +N+L S S VL + YN +I+GL K G T +A
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT--YNTVIDGLAKAGKTGKAIK 470
Query: 674 LLDLMLGKGWVPDATTHGLLVGS 696
LLD M K PD T+ LVG
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGG 493
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 210/456 (46%), Gaps = 8/456 (1%)
Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDL 303
++ ++ +++ L M G ++ T +I CR K +A ++ +++
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 304 MPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV- 362
+PD +TY +I+ C+ +++A +L+ M V +P + I+R LC+ GK +++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225
Query: 363 ---NFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLC 418
L+ C + L+E C A +L++M DR D ++N+ + +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 419 ENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSI 478
+ + +A + L M S P+ T++ + C + DA ++ + + +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
+++ L+ LC+ + A+++ M ++GC +S S+N L++G C +K+D+AI
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
S G TY ++ L K + +D + +L Q+ +GC+ + Y +I +++ K
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
+ M L PD T SL+ GL+ ++ ++ ++ +N +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ GL K T +A L M+ +G P+ T++ +L+
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 172/384 (44%), Gaps = 6/384 (1%)
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
+++ S + ++ AM VL M V + +++ A + G + + EM
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS-GVGHAMKLLDEMRD 267
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
G P+V T N L+ + + R++ A+ M GC PN T I+++ + + R D
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
+ +L +M G + + +I LCR+ L AI + + M P+ L+Y L++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED----KCGY 371
C+ ++D A + LE M+ G P + ++ LC+ GK +++V L C
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
V +N +++ AGK A +L++M + + D +++ + L ++ +A +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
+ P+ T+++ +LG CK + A+ + + + SY+ L+EGL
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 491 EKITEAVEVFCCMSKNGCSLSSSS 514
EA+E+ + G SS+
Sbjct: 568 GMAKEALELLNELCNKGLMKKSSA 591
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 16/318 (5%)
Query: 411 NIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSA 470
N +R + E+ + ++ L MV VPD + + G C+L A ++ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 471 QSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDK 530
V D I+Y+ ++ G C+ +I A+ V MS S ++N ++ LC K+ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222
Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
A+ + TYT ++ + + +L +M GC DV Y +L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL----HLVSSGINKLVSD 646
+ ++ +L + F N M +G P+ T +L + + L++ + K S
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 647 SEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT-----HGLLVGSSVGEE 701
S V +NILIN L ++GL +A +L+ M G P++ + HG +
Sbjct: 343 SVV----TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 702 IDSRRFAFDSSSFPDSVS 719
I+ +PD V+
Sbjct: 399 IEYLERMVSRGCYPDIVT 416
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
TY M+ L G VE+ + + + V +++ + A+++L M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 158 NSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNR 217
+ K ++ ++G + E + + + + E + GI PN T N ++ L ++ +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGK-VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 218 IESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
+ A+D M +GC PN ++ I+I+GL +++ +L E+ + G+
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/556 (24%), Positives = 241/556 (43%), Gaps = 73/556 (13%)
Query: 141 FVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVP 200
F +++ A+ VL M G++ + + +L KR +D V + +MV+ G P
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR-ISDAVALVDQMVEMGYKP 186
Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
+ T L+ LF N+ A+ +M ++GC P+ T+ V+ GL +D ++++L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
+M I+ + + II LC+ +E A+ LF M + P+ +TY LINCLC
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
R DA+ +L +M+ + P F NAL+
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTF-------------------------------NALI 335
Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
+ GK A+ + E+M R I D ++N+ I C + + +A ++ MV +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
P+ TY+ + G CK ED + +FR++S + LV ++++Y+ +++G Q A V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
F M N +++IL++GLC K+D A
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA---------------------------- 487
Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDC-ALFFNVMVKAGLVPDRE 618
LV+ + L++ Y +I+ M + K+ + LF ++ +K PD
Sbjct: 488 -------LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVV 536
Query: 619 TMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLM 678
T +++ GL L K+ D + +S YN LI ++ + ++ L+ M
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Query: 679 LGKGWVPDATTHGLLV 694
G+V DA+T L+
Sbjct: 597 RSSGFVGDASTISLVT 612
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/559 (22%), Positives = 247/559 (44%), Gaps = 24/559 (4%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D V ++ +MVK+ P++ N LL + + N+ E + +M G + T+ I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
S++ ++++L +M LG + ++ + ++ C ++ +A+ L M +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
PD T+ LI+ L + + +A +++ M+ G P + +V GLC+ G D ++N
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 365 LED------KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
L K V N +++ C +A + +M + I + ++N I L
Sbjct: 246 LNKMEAARIKANVVI--FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
C A LL M+ + P+ T++A + K +A ++ ++ +S+ D+
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSL 537
I+Y+ L+ G C ++ EA ++F M C + ++N LI G C ++V+ + L
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 538 AYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNK 597
G T TYT I+ G + +V QM+ D+ Y IL+ + K
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 598 LKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNI 657
L + F + K+ + + +++ G+ + V + S S D YN
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK---VGEAWDLFCSLSIKPDVVTYNT 540
Query: 658 LINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE-----------EIDSRR 706
+I+GL + L +A L M G +P++ T+ L+ +++ + E+ S
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 707 FAFDSSSFPDSVSDILAEG 725
F D+S+ V+++L +G
Sbjct: 601 FVGDASTI-SLVTNMLHDG 618
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 230/521 (44%), Gaps = 24/521 (4%)
Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRT 239
+R FA Y+E+++ N L +++ +++ A+D F M K P+
Sbjct: 40 ERSFASASGDYREILR----------NRLSDII----KVDDAVDLFGDMVKSRPFPSIVE 85
Query: 240 FEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR 299
F ++ + ++ + +S+ +M LGI +L Y+ I CR ++L A+ + M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
L PD +T L+N C + R+ DA +++ M+ +G P F ++ GL K
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 360 ESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPI 414
E+V ++ P + ++ C G LA +L KM A R A+ +N I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
LC+ + A +L M + P+ TY++ + C + DA R+ + + +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
+ ++++ L++ + K+ EA ++ M + + ++N+LI G C+ ++D+A ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
S TY ++ G K +R +D + + +M G + Y +IQ +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSS 653
+ F MV + D T LLHGL +L + I K + SE+ L+
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD-TALVIFKYLQKSEMELNIF 504
Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+YN +I G+ K G +A DL PD T+ ++
Sbjct: 505 IYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMI 542
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 34/346 (9%)
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
SL+ N+ R + A R+L NM +V FN ++ A +E + + +++EM++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK-LVEAEKLHEEMIQ 356
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
I P+ T N L+ NR++ A F+ M K C PN +T+ +I G RV+D
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
V + EM G+ YT II + + A +FK M + + D +TY L++
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP 375
LC +LD A I + + + ++ ++ G+C+ GK E+ + C P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKP 533
Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
D ++N I LC +++A +L +M
Sbjct: 534 ------------------------------DVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
+P+ TY+ + + C+ + + +++ + V D+ + S
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 79 ALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
+++F+ +S Q+ TY +I AG+ + + + + MV R P L+
Sbjct: 417 GVELFREMS-QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL-GAIVEEKRGFADFVFVYKEMVKAG 197
++ +++ A+ + + +L++ ++N ++ G K G A +F
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF-----CSLS 530
Query: 198 IVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSV 257
I P+V T N ++ L ++ A D FR+M + G PNS T+ +I+ + + S
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 258 SILGEMFDLGIQLELSFYTCIIPML 282
++ EM G + S + + ML
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTNML 615
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 138/562 (24%), Positives = 247/562 (43%), Gaps = 72/562 (12%)
Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
++GA ++ M + G + +V ++ ++ ++ R F D + V KEM + GI P++ N
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR-FGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
L+ L + R++ A M + G PN+ T+ I G I S + + EM +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 267 GIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
G+ T +I C++ K+ EA ++ M ++ D TY L+N L +N ++DDA
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 327 NDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNA 386
+I +M G+ P + ++ G ++G ++ + ++ +P+ +
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII------- 664
Query: 387 GKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
+N+ + C + EI KA ELL M V + P+ TY
Sbjct: 665 -----------------------YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
+ G CK + +A R+F ++ + LV DS Y+ LV+G C++ + A+ +F +K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKK 760
Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLG-LVKLQRAKD 565
GC+ S++ FN LI + K T T ++M G + + D
Sbjct: 761 GCASSTAPFNALINWVFKFGK---------------TELKTEVLNRLMDGSFDRFGKPND 805
Query: 566 LLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLH 625
+ Y I+I + ++ L+ F+ M A L+P T SLL+
Sbjct: 806 V-----------------TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 626 GLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVP 685
G + + ++ ++ D MY+++IN KEG+T++A L+D M K V
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 686 D------ATTHGLLVG-SSVGE 700
D +T LL G + VGE
Sbjct: 909 DGCKLSISTCRALLSGFAKVGE 930
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 219/509 (43%), Gaps = 40/509 (7%)
Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
+ M+ G+VP T + L++ L + R+E A M G ++ T+ ++I GL+
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
D + ++ EM GI ++ Y C I ++ +E +E+A LF M A L+P Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCG 370
LI C + ++L +M + + + +V+G+C G D + N +++
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 371 YVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRK 425
P + L++ +F A +L++M ++ IA D +N I L + + + +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
A L MV + + P+ TY AF+ G + + A + +++ ++ + + + L+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
C+ K+ EA + M G I G
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQG-----------ILG------------------------ 590
Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
TYT +M GL K + D + +M +G A DV +Y +LI S+ ++ + F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
+ MV+ GL P+ LL G ++ ++++ ++ Y +I+G K
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
G ++A L D M KG VPD+ + LV
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/541 (20%), Positives = 230/541 (42%), Gaps = 10/541 (1%)
Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
++ M+ +G++P L+E + + M K+ + T+ V+KG+
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
++ +D + +I+ EM G + + YT +I + ++ +A+R+ K M+ + PD
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
Y LI L + R+D+A L +M+ GL P + + G E +F + ++++
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 368 -KCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEI 423
+CG + + L+ C GK A M D+ I D ++ + + L +N+++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 424 RKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKL 483
A E+ M + PD +Y + G KL N + A +F ++ + L + I Y+ L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 484 VEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGT 543
+ G C+ +I +A E+ MS G ++ ++ +I G C + +A RL G
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 544 SYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCAL 603
+ YT ++ G +L + + + +GCA + LI + + K +
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 604 FFNVMVKAGL----VPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
N ++ P+ T ++ L L +++ + + + Y L+
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFDSSSFPDSVS 719
NG K G ++ + D + G PD + +++ + + E + ++ F +
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 720 D 720
D
Sbjct: 908 D 908
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 33/402 (8%)
Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
Y+ MV GI+ + T L+ LF+ ++++ A + FR M KG P+ ++ ++I G
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
+ + SI EM + G+ + Y ++ CR ++E+A L M L P+ +T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---E 366
Y +I+ C++ L +A + ++M + GL P V+ +V G C + + ++ +
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759
Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-----ADCDSWNIPIRWLCENE 421
C T+P NAL+ GK L +L ++ D + ++NI I +LC+
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 422 EIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYS 481
+ A EL +M ++++P TY++ + G K+ + VF + A + D I YS
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 482 KLVEGLCQVEKITEA-VEVFCCMSKN----GCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
++ + T+A V V +KN GC LS S+ L+ G + +++ A
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA----- 934
Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
K+M +V+LQ D V+ +++ E C
Sbjct: 935 --------------EKVMENMVRLQYIPDSATVI-ELINESC 961
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 104/512 (20%), Positives = 183/512 (35%), Gaps = 149/512 (29%)
Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
+EEA+ +F L+L+P + L++ L RLD +F D
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD-------------------LFWD 207
Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADC 407
+ +G+ +E + ++ L+ C AG L K +L K
Sbjct: 208 VYKGM------------VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE----- 250
Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
+ + A +L M+ +VP TY + G CK+ EDA + +
Sbjct: 251 --------FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302
Query: 468 VSAQSLVLDSISYSKLVEGLCQV-----------EKITEAVEV--------FCCMSKNGC 508
+ + + LD+ +YS L++GL + E ++ + + C MSK G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 509 S----------------LSSSSFNILIYGLCVMRKVDKAIRL------RSL--------- 537
+ ++ LI G C + V + L R++
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 538 -------------AY-------SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
AY +SG YT ++ ++ R D + VL +M +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH--- 634
A D+ Y LI +S+ ++ + F MV+ GL P+ T + + G + S+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 635 ----------------LVSSGINKLVSDSEVL----------------DSSMYNILINGL 662
L + IN+ +V+ D+ Y +L+NGL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 663 WKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+K A + M GKG PD ++G+L+
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/547 (25%), Positives = 257/547 (46%), Gaps = 22/547 (4%)
Query: 67 IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER 126
+ V++N + + K+FK F+ T MI +G+ + +E L + E
Sbjct: 48 MEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLEN 107
Query: 127 YPNVREALISLVFSFVNHYRVNGAMRVLVNM-NSGGFKLSVDVFNVVLGAIVEE---KRG 182
+ + I + ++ + + A+ + M + K SV FN VL I+ E RG
Sbjct: 108 RVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG 167
Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
+ +V + I PN + N +++ L + ++ A++ FR M ++ C P+ T+
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
++ GL R+D++V +L EM G Y +I LC++ L +L M
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
+P+E+TY LI+ LC +LD A +LE M+ P D + ++ GL + + ++V
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 363 NFLE--DKCGYVTSPH--NALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
L ++ GY + H + L+ GK A + KMA++ + +++ + L
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG--KCKLCNYEDALRVFRQVSAQSLVL 475
C + +A E+L RM+ S +P+ TYS+ + G K LC E+A++V++++
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC--EEAVQVWKEMDKTGCSR 465
Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
+ YS L++GLC V ++ EA+ V+ M G + +++ +I GLC + +D A++L
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 536 S---LAYSSGTSYTTSTYTKIMLGLV---KLQRAKDLLVVLAQMLVEGCALDVEAYCILI 589
+ TY ++ GL + RA DL L ML GC DV +
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL---LNSMLDRGCDPDVITCNTFL 582
Query: 590 QSMSEQN 596
++SE++
Sbjct: 583 NTLSEKS 589
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 219/479 (45%), Gaps = 38/479 (7%)
Query: 219 ESALDQFRRMHKKGCCPNS-RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELS---- 273
+ A+D F RM + C S ++F V+ +I + + + + + +S
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188
Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDM 333
+ +I LC+ ++ AI +F+ M +PD TY L++ LC+ R+D+A +L++M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 334 IVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAK 393
G +P+ ++ ++ GLC+ G +++ FL
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN---------------------MFLKG 287
Query: 394 CILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKC 453
C+ ++ ++N I LC ++ KA LL RMV S +P+ TY + G
Sbjct: 288 CVPNEV---------TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 454 KLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSS 513
K DA+R+ + + L+ YS L+ GL + K EA+ ++ M++ GC +
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
+++L+ GLC K ++A + + +SG TY+ +M G K ++ + V +M
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
GC+ + Y +LI + ++K+ + ++ M+ G+ PD S++ GL +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 634 HLVSSGINKLVSDSEV---LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
++++ E D YNIL++GL + S+A LL+ ML +G PD T
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/528 (21%), Positives = 215/528 (40%), Gaps = 105/528 (19%)
Query: 56 SLRHNLSPDHL-----IRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAG 110
++ N+SP+ L I+ L + A+++F+ + +++ TYC +
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTL-------- 228
Query: 111 NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFN 170
M+GLC+ R++ A+ +L M S G S ++N
Sbjct: 229 ----MDGLCK-----------------------EERIDEAVLLLDEMQSEGCSPSPVIYN 261
Query: 171 VVLGAIVEEKRGFADFVFVYK---EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
V++ + ++ D V K M G VPN T N L+ L +++ A+ R
Sbjct: 262 VLIDGLCKK----GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
M C PN T+ +I GL+ R D+V +L M + G L Y+ +I L +E K
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
EEA+ L++ M P+ + Y L++ LC + ++A +IL MI G P +
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 348 IVRGLCEVGKFDESVNFLE--DKCGYVTSP--HNALLECCCNAGKFFLAKCILEKM---- 399
+++G + G +E+V + DK G + ++ L++ C G+ A + KM
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 400 -----------------------------------ADRKIADCDSWNIPIRWLCENEEIR 424
+ D ++NI + LC ++I
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
+A +LL M+ PD T + F+ + N D R F + +LV
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE--------------ELV 603
Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
L + ++++ A + M + +S++ +++ +C +K++ AI
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
S+N+ I+ LC+ + +A E+ M +PD TY + G CK ++A+ + ++
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
++ + Y+ L++GLC+ +T ++ M GC + ++N LI+GLC+ K+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
DKA+ L SS TY ++ GLVK +RA D + +L+ M G L+ Y +L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSE 648
I + ++ K ++ + M + G P+
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPN-------------------------------- 396
Query: 649 VLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+Y++L++GL +EG ++A +L+ M+ G +P+A T+ L+
Sbjct: 397 ---IVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 144/365 (39%), Gaps = 97/365 (26%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
TY +I L L G +++ L + MV + +L+ V R A+R+L +M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 158 NSGGFKLSVDVFNVVLGAIVEE--------------KRGFADFVFVY------------- 190
G+ L+ +++V++ + +E ++G + VY
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 191 -------KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIV 243
M+ +G +PN T + L++ F+T E A+ ++ M K GC N + ++
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 244 IKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM----- 298
I GL RV +++ + +M +GI+ + Y+ II LC ++ A++L+ M
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 299 ------------------------RALDLM---------PDELT---------------- 309
RA+DL+ PD +T
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593
Query: 310 -----YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
EEL+ L + R+ A I+E M+ L P + IVR +C+ K + ++
Sbjct: 594 KGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI-- 651
Query: 365 LEDKC 369
DKC
Sbjct: 652 --DKC 654
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 35/188 (18%)
Query: 514 SFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
SFN++I LC +R VD+AI + TY +M GL K +R + +++L +M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
EGC+ Y +LI + ++ L + M G VP+ T
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT-------------- 294
Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
YN LI+GL +G +A LL+ M+ +P+ T+G L
Sbjct: 295 ---------------------YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 694 VGSSVGEE 701
+ V +
Sbjct: 334 INGLVKQR 341
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/535 (23%), Positives = 250/535 (46%), Gaps = 6/535 (1%)
Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
S+ FN +L AI + + F + + + M I ++ + N L+ +++ AL
Sbjct: 79 SIVEFNKLLSAIAKMNK-FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
+M K G P+ T ++ G R+ ++V+++ +MF + Q + +I L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
NK EA+ L M A PD TY ++N LC+ +D A +L+ M + +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMA 400
+ I+ LC ++++N + P +N+L+ C CN G++ A +L M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 401 DRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYE 459
+RKI + +++ I + ++ +A +L M+ S+ PD TYS+ + G C +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
+A +F + ++ + ++Y+ L++G C+ +++ E +E+F MS+ G ++ ++N LI
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 520 YGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCA 579
GL D A ++ S G TY+ ++ GL K + + LVV +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 580 LDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSG 639
D+ Y I+I+ M + K++D F + G+ P+ +++ G +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
++ D + +S YN LI ++G + ++ L+ M G+V DA+T +++
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 224/499 (44%), Gaps = 6/499 (1%)
Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
L+ F ++ A+ VL M G++ + + +L KR ++ V + +M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR-ISEAVALVDQMFVM 179
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
PN T N L+ LF N+ A+ RM +GC P+ T+ V+ GL +D +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
+S+L +M I+ ++ YT II LC + +A+ LF M + P+ +TY LI C
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP- 375
LC R DA+ +L DMI + P F ++ + GK E+ ++ P
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 376 ---HNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLG 431
+++L+ C + AK + E M + + ++N I+ C+ + + + EL
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
M +V + TY+ + G + + + A ++F+++ + + D I+YS L++GLC+
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
K+ +A+ VF + K+ ++NI+I G+C KV+ L G YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
++ G + ++ + +M +G + Y LI++ A M
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 612 GLVPDRETMLSLLHGLADG 630
G V D T+ +++ L DG
Sbjct: 600 GFVGDASTISMVINMLHDG 618
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/522 (22%), Positives = 221/522 (42%), Gaps = 48/522 (9%)
Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
+++ A+D F M + P+ F ++ + ++ D +S+ M +L I +L Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
+I CR ++L A+ + M L PD +T L+N C R+ +A +++ M V+
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA 392
P F ++ GL K E+V ++ P + ++ C G LA
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 393 KCILEKMADRKI------------ADCD------------------------SWNIPIRW 416
+L+KM KI A C+ ++N IR
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
LC A LL M+ + P+ T+SA + K +A +++ ++ +S+ D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
+YS L+ G C +++ EA +F M C + ++N LI G C ++V++ + L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
G T TY ++ GL + + +M+ +G D+ Y IL+ + +
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH----LVSSGINKLVSDSEVLDS 652
KL+ + F + K+ + PD T ++ G+ ++ L S K V + ++
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII-- 537
Query: 653 SMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
Y +I+G ++GL +A L M G +P++ T+ L+
Sbjct: 538 --YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 174/424 (41%), Gaps = 40/424 (9%)
Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--- 367
E+L + +L+LDDA D+ +M+ P+ F ++ + ++ KFD ++ E
Sbjct: 49 EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 108
Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMAD--------------------RKIAD 406
+ Y +N L+ C C + LA +L KM ++I++
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 407 C----------------DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
++N I L + + +A L+ RMV PD TY V
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
G CK + + AL + +++ + D + Y+ +++ LC + + +A+ +F M G
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
+ ++N LI LC + A RL S + T++ ++ VK + + +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
+M+ D+ Y LI ++L + F +M+ P+ T +L+ G
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
++ ++ V ++ YN LI GL++ G A + M+ G PD T+
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 691 GLLV 694
+L+
Sbjct: 469 SILL 472
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 221/504 (43%), Gaps = 40/504 (7%)
Query: 45 HQTTDYEAKIQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSI-QKRFQHTADTYCKMI 103
Q + I+ L P L+ ++ ++ AL+IF + F H DTY ++
Sbjct: 31 QQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSIL 90
Query: 104 LKLGLAGNVEEMEGLCQNMVKERYPNVR---EALISLVFSFVNHYRVNGAMRVLVNMNSG 160
KL A + +E L ++ + YP ++ I L+ ++ R +MR+ + +
Sbjct: 91 FKLSRARAFDPVESLMADL-RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF 149
Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA--GIVPNVDTLNYLLEVLFETNRI 218
G K SV N +L +++ +R D V + K GI PN+ T N L++ L + N I
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQR--FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
ESA + G PN T+ ++ G +A ++ + +L EM D G + + YT +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
+ C+ + EA + M ++ P+E+TY +I LC+ + +A ++ ++M+
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
P + ++ LCE K DE+ P NALL
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL--------------- 372
Query: 399 MADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
I WLC+ + +A +L S +P TY+ + G C+
Sbjct: 373 ---------------IHWLCKEGRVTEARKLFDEFEKGS-IPSLLTYNTLIAGMCEKGEL 416
Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
+A R++ + + ++ +Y+ L+EGL + + E V V M + GC + ++F IL
Sbjct: 417 TEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLIL 476
Query: 519 IYGLCVMRKVDKAIRLRSLAYSSG 542
GL + K + A+++ S+A +G
Sbjct: 477 FEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 204/454 (44%), Gaps = 18/454 (3%)
Query: 187 VFVYKEMVKAGIVPNVDTLNYLLEVLFETNR------IESALDQFRRMHKKGCCPNSRTF 240
+F+Y G N DT + +LF+ +R +ES + R + C F
Sbjct: 68 IFLYAGKSHPGFTHNYDTYH---SILFKLSRARAFDPVESLMADLRNSYPPIKC-GENLF 123
Query: 241 EIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMR- 299
+++ R + S+ I + D G++ + ++ +L + + + +FK +
Sbjct: 124 IDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKE 183
Query: 300 ALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD 359
+ + P+ T L+ LC+ ++ A +L+++ +GL P + I+ G G +
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 360 ESVNFLE---DKCGYV-TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD-SWNIPI 414
+ LE D+ Y + + L++ C G+F A +++ M +I + ++ + I
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
R LC+ ++ +A + M+ S +PD + + C+ ++A ++R++ + +
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
D+ S L+ LC+ ++TEA ++F K G S ++N LI G+C ++ +A RL
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRL 422
Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
Y TY ++ GL K K+ + VL +ML GC + + IL + + +
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Query: 595 QNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLA 628
K +D ++ V G V D+E+ L A
Sbjct: 483 LGKEEDAMKIVSMAVMNGKV-DKESWELFLKKFA 515
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 166/376 (44%), Gaps = 15/376 (3%)
Query: 342 DDVFVDIVRGLCEVGKFDESVN-FLE-DKCGYVTSPH--NALLECCCNAGKFFLAKCILE 397
+++F+D++R G+++ S+ FL G S N LL +F L + +
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 179
Query: 398 KMADR-----KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
+ I C N+ ++ LC+ +I AY++L + +VP+ TY+ + G
Sbjct: 180 NSKESFGITPNIFTC---NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
+ E A RV ++ + D+ +Y+ L++G C++ + +EA V M KN +
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 513 SSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQ 572
++ ++I LC +K +A + +S K++ L + + + + +
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356
Query: 573 MLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQ 632
ML C D LI + ++ ++ + F+ K G +P T +L+ G+ + +
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGE 415
Query: 633 LHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGL 692
L + + ++ YN+LI GL K G + +L+ ML G P+ TT +
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 693 LVG--SSVGEEIDSRR 706
L +G+E D+ +
Sbjct: 476 LFEGLQKLGKEEDAMK 491
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 239/516 (46%), Gaps = 6/516 (1%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D + ++ +MVK+ P++ + LL + + N+ + + +M G N T+ I I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
S++ +++ILG+M LG + ++ C N++ EA+ L M +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNF 364
PD +T+ L++ L ++ + +A ++E M+V G P + ++ GLC+ G+ D ++N
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 365 LED-KCGYVTSP---HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCE 419
L + G + + +N +++ C A + KM + I D ++N I LC
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSI 478
A LL M+ ++ PD ++A + K +A +++ + V ++ D +
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 479 SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLA 538
+Y+ L++G C+ +++ E +EVF MS+ G ++ ++ LI+G R D A +
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 539 YSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKL 598
S G TY ++ GL + LVV M LD+ Y +I+++ + K+
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 599 KDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNIL 658
+D F + G+ P+ T +++ G + ++ D + +S YN L
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Query: 659 INGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
I ++G + ++ L+ M G+ DA+T GL+
Sbjct: 538 IRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVT 573
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 184/393 (46%), Gaps = 11/393 (2%)
Query: 141 FVNHY----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
F+N++ +++ A+ +L M G+ S+ N +L R ++ V + +MV+
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR-ISEAVALVDQMVEM 174
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
G P+ T L+ LF+ N+ A+ RM KGC P+ T+ VI GL D +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
+++L +M I+ ++ Y II LC+ +++A LF M + PD TY LI+C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 317 LCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-----KCGY 371
LC R DA+ +L DM+ + P F ++ + GK E+ ++ C
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELL 430
+N L++ C + + +M+ R + + ++ I + + A +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
+MV V PD TY+ + G C N E AL VF + + + LD ++Y+ ++E LC+
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
K+ + ++FC +S G + ++ ++ G C
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 175/425 (41%), Gaps = 41/425 (9%)
Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--- 367
E L + ++L+LDDA + DM+ P+ F ++ + ++ KFD ++ E
Sbjct: 44 ENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103
Query: 368 ----------------------------------KCGYVTS--PHNALLECCCNAGKFFL 391
K GY S N+LL C+ +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
A ++++M + D ++ + L ++ + +A L+ RMVV PD TY A +
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
G CK + AL + ++ + D + Y+ +++GLC+ + + +A ++F M G
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
++N LI LC + A RL S + + ++ VK + + +
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 571 AQML-VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLAD 629
+M+ + C DV AY LI+ + ++++ F M + GLV + T +L+HG
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 630 GSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
++VSD D YNIL++GL G A + + M + D T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 690 HGLLV 694
+ ++
Sbjct: 464 YTTMI 468
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 2/287 (0%)
Query: 415 RWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
R + ++ ++ A L G MV S P +S + K+ ++ + + Q+ +
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 475 LDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
+ +YS + C+ +++ A+ + M K G S + N L+ G C ++ +A+ L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 535 RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE 594
G T T+T ++ GL + +A + + ++ +M+V+GC D+ Y +I + +
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 595 QNKLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
+ + D AL N M K + D +++ GL + NK+ + D
Sbjct: 228 RGE-PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
YN LI+ L G S AS LL ML K PD L+ + V E
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 152/647 (23%), Positives = 279/647 (43%), Gaps = 56/647 (8%)
Query: 61 LSPDHLIRVL-DNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLC 119
L+P + RVL + D A K FKW + F+H+ ++YC + L A + +
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165
Query: 120 QNMVKERYP-NVREALISLVFSFVNHYRVNGAM-RVLVNMNSGGFKLSVDVFNVVLGAIV 177
+ MV + +V + L S V + V A+ VL+++ G + ++ F+ + V
Sbjct: 166 KEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL--GMLEEAIQCFSKMKRFRV 223
Query: 178 EEK--------RGFA------DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
K FA D +K+M+ AG P V T N +++ + + +E+A
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLC 283
F M +G P++ T+ +I G R+DD+V EM D+ + ++ Y +I C
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
+ KL + ++ M+ L P+ ++Y L++ C+ + A DM +GL P +
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 344 VFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK 403
+ ++ C++G ++ F L +L+ +
Sbjct: 404 TYTSLIDANCKIGNLSDA---------------------------FRLGNEMLQVGVEWN 436
Query: 404 IADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
+ ++ I LC+ E +++A EL G+M + V+P+ A+Y+A + G K N + AL
Sbjct: 437 VV---TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
+ ++ + + D + Y + GLC +EKI A V M + G +S + L+
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK---LQRAKDLLVVLAQMLVEGCAL 580
+ + L T T+ ++ GL K + +A D ++ G
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF--GLQA 611
Query: 581 DVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG-LADGSQLHLVSSG 639
+ + +I + + N+++ F MV+ GLVPDR SL+ G G+ L ++
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 640 INKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
+K+ LD Y L+ GL +A L+ M+G+G PD
Sbjct: 672 -DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 239/541 (44%), Gaps = 27/541 (4%)
Query: 156 NMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFET 215
+M GFK SV+ + +V I+ R + D V KEMV + +V +VL+ T
Sbjct: 132 SMTRNGFKHSVESYCIV-AHILFCARMYYDANSVLKEMVLSKADCDV------FDVLWST 184
Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFY 275
+ C P F+ + LI +++++ +M + +
Sbjct: 185 RNV--------------CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230
Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
++ + K ++ R FK M P TY +I+C+C+ ++ A + E+M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
GL P + ++ G +VG+ D++V F E+ P +NAL+ C C GK +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
+M + + S++ + C+ +++A + M +VP+ TY++ +
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
CK+ N DA R+ ++ + + ++Y+ L++GLC E++ EA E+F M G
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
+ +S+N LI+G + +D+A+ L + G Y + GL L++ + VV+
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
+M G + Y L+ + + + + M + + T L+ GL
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 631 SQLHLVSSGINKLVSDSEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATT 689
+ N++ +D + +++++ +I+GL K+ A+ L + M+ KG VPD T
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650
Query: 690 H 690
+
Sbjct: 651 Y 651
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 111/262 (42%)
Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
M+ + P TY+ + CK + E A +F ++ + LV D+++Y+ +++G +V +
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
+ + V F M C ++N LI C K+ + +G +Y+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
++ K + + M G + Y LI + + L D N M++ G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 613 LVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQAS 672
+ + T +L+ GL D ++ K+ + + + + YN LI+G K +A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 673 YLLDLMLGKGWVPDATTHGLLV 694
LL+ + G+G PD +G +
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFI 514
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 122/302 (40%), Gaps = 39/302 (12%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRVNGAMRVLVN 156
TY +I L A ++E E L M PN+ + +L+ FV ++ A+ +L
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL-ASYNALIHGFVKAKNMDRALELLNE 497
Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN 216
+ G K + ++ + + ++ A V V EM + GI N L++ F++
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV-VMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQLELSFY 275
L M + TF ++I GL N V +V + D G+Q + +
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDE---------------------------- 307
T +I LC++N++E A LF+ M L+PD
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 308 -------LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDE 360
L Y L+ L +L A LE+MI G+ P + + + +++ E+G DE
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 736
Query: 361 SV 362
+V
Sbjct: 737 AV 738
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 6/255 (2%)
Query: 456 CNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
C+ D L R V + +S L++ + + EA++ F M + + S
Sbjct: 175 CDVFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSC 230
Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
N L++ + K D R +G T TY ++ + K + + +M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHL 635
G D Y +I + +L D FF M PD T +L++ +L +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 636 VSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVG 695
++ + + Y+ L++ KEG+ QA M G VP+ T+ L+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 696 SS--VGEEIDSRRFA 708
++ +G D+ R
Sbjct: 411 ANCKIGNLSDAFRLG 425
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 156/667 (23%), Positives = 285/667 (42%), Gaps = 70/667 (10%)
Query: 45 HQTTDYEA--KIQSLRHNLSP-------DHLIRVLDNTN-DLSSALKIFKWVSIQKRFQH 94
HQ T+ + + LR +L P DHLI VL D L F W + R
Sbjct: 60 HQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA--RSRRDS 117
Query: 95 TADTYCKMILKLGLAG-NVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGA-MR 152
++ C +++ L +A +++ + L + + NV ++ + V Y+ G+ R
Sbjct: 118 NLESLC-IVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPR 176
Query: 153 VLVNMNSGGFKLSVDVFNVVL---GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN-YL 208
V DVF VL G + E +R V+++M+ G+V +VD+ N YL
Sbjct: 177 VF------------DVFFQVLVDFGLLREARR-------VFEKMLNYGLVLSVDSCNVYL 217
Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
+ + + +A+ FR + G C N ++ IVI + R+ ++ +L M G
Sbjct: 218 TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
++ Y+ ++ CR +L++ +L ++M+ L P+ Y +I LC +L +A +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGK 388
+MI G+ P V+ ++ G C+ G A K
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA-------------------------ASK 372
Query: 389 FFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSA 447
FF +M R I D ++ I C+ ++ +A +L M + PD T++
Sbjct: 373 FFY------EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 448 FVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
+ G CK + +DA RV + + ++Y+ L++GLC+ + A E+ M K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
+ ++N ++ GLC +++A++L ++G + T TYT +M K
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
+L +ML +G + + +L+ L+D N M+ G+ P+ T SL+
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
+ L ++ + S D Y L+ G K +A +L M GKG+
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 688 TTHGLLV 694
+T+ +L+
Sbjct: 667 STYSVLI 673
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 205/477 (42%), Gaps = 17/477 (3%)
Query: 122 MVKERYPNVREALISLVFSFVNHY-----RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI 176
+V +P V ++ V H+ R+ A +L+ M G+ V ++ V+
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 177 VEEKRGFADFVFVYK---EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
F + V+K M + G+ PN ++ +L ++ A + F M ++G
Sbjct: 292 CR----FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
P++ + +I G + + EM I ++ YT II C+ + EA +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 294 LFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC 353
LF M L PD +T+ ELIN C+ + DA + MI G +P + ++ GLC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 354 EVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLA-KCILEKMADRKIADCD 408
+ G D + L + P +N+++ C +G A K + E A AD
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
++ + C++ E+ KA E+L M+ + P T++ + G C ED ++ +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
A+ + ++ +++ LV+ C + A ++ M G ++ L+ G C R +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
+A L G S + STY+ ++ G +K ++ + V QM EG A D E +
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 186/446 (41%), Gaps = 45/446 (10%)
Query: 81 KIFKWVSIQKR--FQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLV 138
K++K + + KR + + Y +I L + E E M+++ +L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 139 FSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL------GAIVEEKRGFADFVFVYKE 192
F + A + M+S V + ++ G +VE + ++ E
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK-------LFHE 411
Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
M G+ P+ T L+ + ++ A M + GC PN T+ +I GL
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
+D + +L EM+ +G+Q + Y I+ LC+ +EEA++L A L D +TY
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
L++ C++ +D A +IL++M+ GL PT F ++ G C G ++ L
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN------ 585
Query: 373 TSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGR 432
+ LAK I + ++N ++ C ++ A +
Sbjct: 586 ----------------WMLAKGI--------APNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 433 MVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK 492
M V PD TY V G CK N ++A +F+++ + + +YS L++G + +K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNIL 518
EA EVF M + G + F+
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFF 707
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 11/242 (4%)
Query: 98 TYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNM 157
TY ++ L +GN+EE L +L+ ++ ++ A +L M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 158 NSGGFKLSVDVFNVV-----LGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL 212
G + ++ FNV+ L ++E+ ++ M+ GI PN T N L++
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW------MLAKGIAPNATTFNSLVKQY 606
Query: 213 FETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLEL 272
N +++A ++ M +G P+ +T+E ++KG + ++ + EM G + +
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 273 SFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILED 332
S Y+ +I + K EA +F MR L D+ ++ + + R D D +++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDE 726
Query: 333 MI 334
+I
Sbjct: 727 II 728
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 146/600 (24%), Positives = 250/600 (41%), Gaps = 70/600 (11%)
Query: 180 KRGFADFV---FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
+RGF+ F Y+E +++G+V + + A+D FR M P
Sbjct: 43 ERGFSAFSDRNLSYRERLRSGLV---------------DIKADDAIDLFRDMIHSRPLPT 87
Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
F + + + D +++ +M GI L + +I CR KL A
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
+ L P+ +T+ LIN LC R+ +A ++++ M+ +G P +V GLC G
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 357 KFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWN 411
K E++ ++ Y P + +L C +G+ LA +L KM +R I D ++
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
I I LC++ + A+ L M + + + TY+ + G C ++D ++ R + +
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA 531
+ + +++S L++ + K+ EA E+ M G + + ++ LI G C +DKA
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 532 IRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQS 591
++ L S G T+ ++ G K R D L + +M + G D Y LIQ
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 592 MSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLD 651
E KL F MV + P+ T LL GL D + K+ LD
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 652 SSMYNILINGL---------W--------------------------KEGLTSQASYLLD 676
+YNI+I+G+ W K+G S+A L
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 677 LMLGKGWVPDATTHGLLVGSSVG-----------EEIDSRRFAFDSSSFPDSVSDILAEG 725
M G PD T+ +L+ + +G EE+ F+ D+S+ V D+L++G
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK-MVIDMLSDG 626
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 140/608 (23%), Positives = 273/608 (44%), Gaps = 37/608 (6%)
Query: 119 CQNMVKERYPNVRE-ALISLVFSFVNHYRVNGAMRVLVN-MNSGGFKLSV---------- 166
Q + E +P+ LIS+V S ++H++ A +LV+ + + LS+
Sbjct: 65 AQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLH 124
Query: 167 -------DVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFE---TN 216
+F++ L A + E + ++++M++ + PN+ T N LL L +
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQ-IFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF-DLGIQLELSFY 275
I SA + F M K G N +TF +++ G +++D++ +L M + + + Y
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 276 TCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIV 335
I+ + ++ +L + L M+ L+P+ +TY L+ C+ L +A I+E M
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 336 IGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAGKFFL 391
+ P + ++ GLC G E + ++ P +N L++ C G
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 392 AKCILEKMADRKI-ADCDSWNIPIRWLCENEE----IRKAYELLGRMVVSSVVPDCATYS 446
A+ ++E+M + + A+ + NI ++WLC+ E+ RK EL+ + PD TY
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD---MHGFSPDIVTYH 420
Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
+ K+ + AL + R++ + + +++I+ + +++ LC+ K+ EA + K
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
G + ++ LI G KV+KA+ + + T ST+ ++ GL + +
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 567 LVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
+ ++ G D + +I ++ +++ F+N +K PD T LL+G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 627 LADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD 686
L + N L+ + EV D+ YN +I+ K+ +A LL M KG PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 687 ATTHGLLV 694
T+ +
Sbjct: 660 RFTYNSFI 667
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 230/512 (44%), Gaps = 21/512 (4%)
Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI---ANSRVDDS 256
P+ + L + AL F++M + PN T ++ GL+ ++ + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELIN 315
+ +M +G+ L + + ++ C E KLE+A+ + +M+ + PD +TY ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES---------VNFLE 366
+ + RL D ++L DM GL P + ++V G C++G E+ N L
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
D C Y N L+ CNAG +++ M K+ D ++N I E +
Sbjct: 309 DLCTY-----NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ-VSAQSLVLDSISYSKLV 484
A +L+ +M V + T++ + CK E R ++ V D ++Y L+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
+ +V ++ A+E+ M + G +++ + N ++ LC RK+D+A L + A+ G
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
TY +++G + ++ + L + +M V + LI + K +
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWK 664
F+ + ++GL+PD T S++ G ++ N+ + S D+ NIL+NGL K
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 665 EGLTSQASYLLDLMLGKGWVPDATTHGLLVGS 696
EG+T +A + ++ + V D T+ ++ +
Sbjct: 604 EGMTEKALNFFNTLIEEREV-DTVTYNTMISA 634
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 173/374 (46%), Gaps = 29/374 (7%)
Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK-AGIVPNVDTLNYL 208
A +++ M + G K + N+ L + +E++ A KE+V G P++ T + L
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA-VTRKVKELVDMHGFSPDIVTYHTL 422
Query: 209 LEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGI 268
++ + + AL+ R M +KG N+ T ++ L ++D++ ++L G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 269 QLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND 328
++ Y +I RE K+E+A+ ++ M+ + + P T+ LI LC + + + A +
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 329 ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCC 384
+++ GL P D F I+ G C+ G+ +++ F + + P N LL C
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 385 NAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCAT 444
G A + + + D ++N I C+++++++AY+LL M + PD T
Sbjct: 603 KEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Query: 445 YSAFV---LGKCKLCNYEDALRVFR----------QV----------SAQSLVLDSISYS 481
Y++F+ + KL ++ L+ F QV S + L ++I+YS
Sbjct: 663 YNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYS 722
Query: 482 KLVEGLCQVEKITE 495
+++ LC ++ E
Sbjct: 723 DVIDELCSRGRLKE 736
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 204/459 (44%), Gaps = 16/459 (3%)
Query: 284 RENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE---NLRLDDANDILEDMIVIGLTP 340
E K A+++F+ M L L P+ LT L+ L + + A ++ +DM+ IG++
Sbjct: 143 HEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSL 202
Query: 341 TDDVFVDIVRGLCEVGKFDESVNFLEDKCG-YVTSP----HNALLECCCNAGKFF-LAKC 394
F +V G C GK ++++ LE + +P +N +L+ G+ L +
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
+L+ + + + ++N + C+ +++A++++ M ++V+PD TY+ + G C
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
+ + L + + + L D ++Y+ L++G ++ EA ++ M +G + +
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382
Query: 515 FNILIYGLCVMRKVDKAIR-LRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQM 573
NI + LC K + R ++ L G S TY ++ +K+ L ++ +M
Sbjct: 383 HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 574 LVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
+G ++ ++ ++ ++ KL + N K G + D T +L+ G ++
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKV 502
Query: 634 HLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
+++ S +N LI GL G T A D + G +PD +T +
Sbjct: 503 EKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Query: 694 VGSSVGEEIDSRRFAFDSSSF-----PDSVS-DILAEGL 726
+ E + F F + S PD+ + +IL GL
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 213/453 (47%), Gaps = 33/453 (7%)
Query: 165 SVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQ 224
S+ F+ +L AI + K+ + ++++++M GI N+ T N LL +++ AL
Sbjct: 80 SIADFSRLLSAISKMKK-YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
+M K G P+ TF ++ G RV D++ + +M +G + + Y II LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 285 ENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDV 344
+++ A+ L M + PD +TY LI+ LC + R DA ++ M + P DV
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP--DV 256
Query: 345 FVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI 404
F NAL++ C G+ A+ E+M R +
Sbjct: 257 FT-----------------------------FNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 405 -ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALR 463
D ++++ I LC + +A E+ G MV PD TYS + G CK E ++
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 464 VFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLC 523
+F ++S + +V ++++Y+ L++G C+ K+ A E+F M G + ++N+L++GLC
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVE 583
K++KA+ + + +G TY I+ G+ K D + + +G D+
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 584 AYCILIQSMSEQNKLKDCALFFNVMVKAGLVPD 616
Y ++ + ++ ++ F M + G++P+
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 205/443 (46%), Gaps = 20/443 (4%)
Query: 190 YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIA 249
Y+EM++ GI +++ +LD F M + P+ F ++ +
Sbjct: 49 YREMLRNGI---------------RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK 93
Query: 250 NSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELT 309
+ D + + +M LGI L ++ CR ++L A+ M L P +T
Sbjct: 94 MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT 153
Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL---- 365
+ L+N C R+ DA + + M+ +G P ++ I+ GLC+ + D +++ L
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 366 EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIR 424
+D G +N+L+ C++G++ A ++ M R+I D ++N I + +
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
+A E M+ S+ PD TYS + G C ++A +F + ++ D ++YS L+
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
G C+ +K+ +++FC MS+ G ++ ++ ILI G C K++ A + G
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
TY ++ GL + + LV+LA M G D+ Y I+I+ M + ++ D
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Query: 605 FNVMVKAGLVPDRETMLSLLHGL 627
+ + GL+PD T +++ GL
Sbjct: 454 YCSLNCQGLMPDIWTYTTMMLGL 476
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 197/455 (43%), Gaps = 30/455 (6%)
Query: 236 NSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF 295
N + +++ I ++DDS+ + M ++ ++ ++ + + K + I L+
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 296 KMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEV 355
+ M+ L + + T L+NC C +L A L MI +G P+ F ++ G C
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 356 GKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIR 415
+ +++ + G P+ + +N I
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVI------------------------------YNTIID 194
Query: 416 WLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
LC+++++ A +LL RM + PD TY++ + G C + DA R+ ++ + +
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
D +++ L++ + +++EA E + M + ++++LIYGLC+ ++D+A +
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
S G TY+ ++ G K ++ + + + +M G + Y ILIQ
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 596 NKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMY 655
KL F MV G+ P+ T LLHGL D ++ + + + D Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 656 NILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
NI+I G+ K G + A + + +G +PD T+
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 160/344 (46%), Gaps = 6/344 (1%)
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
SL+ F RV A+ + M G+K +V ++N ++ + + K+ + + + M K
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ-VDNALDLLNRMEK 214
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
GI P+V T N L+ L + R A M K+ P+ TF +I + RV +
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
+ EM + ++ Y+ +I LC ++L+EA +F M + PD +TY LIN
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 316 CLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK--CGYVT 373
C++ +++ + +M G+ + +++G C GK + + CG
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 374 S--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
+ +N LL C+ GK A IL M + AD ++NI IR +C+ E+ A+++
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLV 474
+ ++PD TY+ +LG K +A +FR++ ++
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 164/425 (38%), Gaps = 75/425 (17%)
Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKC 369
Y E++ ++LDD+ D+ M+ P+ F ++ + ++ K+D V +L ++
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD-VVIYLWEQM 107
Query: 370 GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYEL 429
+ PHN C CN I + C ++ A
Sbjct: 108 QMLGIPHNL---CTCN--------------------------ILLNCFCRCSQLSLALSF 138
Query: 430 LGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQ 489
LG+M+ P T+ + L+ G C+
Sbjct: 139 LGKMIKLGHEPSIVTFGS-----------------------------------LLNGFCR 163
Query: 490 VEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTST 549
+++ +A+ +F M G + +N +I GLC ++VD A+ L + G T
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 550 YTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMV 609
Y ++ GL R D +++ M DV + LI + ++ ++ + F+ M+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 610 KAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTS 669
+ L PD T L++GL S+L +VS D Y+ILING K
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 670 QASYLLDLMLGKGWVPDATTHGLLVGS-------SVGEEIDSRRFAFDSSSFPDSVS-DI 721
L M +G V + T+ +L+ +V EEI RR F P+ ++ ++
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI-FRRMVF-CGVHPNIITYNV 401
Query: 722 LAEGL 726
L GL
Sbjct: 402 LLHGL 406
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 111/234 (47%), Gaps = 3/234 (1%)
Query: 110 GNVEEMEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
G V E E + M++ P++ + L++ + R++ A + M S G V
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSL-LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
+++++ + K+ + ++ EM + G+V N T L++ ++ A + FRRM
Sbjct: 329 YSILINGYCKSKK-VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
G PN T+ +++ GL N +++ ++ IL +M G+ ++ Y II +C+ ++
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
+A ++ + LMPD TY ++ L + +A+ + M G+ P +
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 245/532 (46%), Gaps = 18/532 (3%)
Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLF--ETNRIESALDQFRRM-HK 230
++ EEK A+ + V ++ G P D+L Y L V +T + A R M K
Sbjct: 242 ASLREEKP--AEALEVLSRAIERGAEP--DSLLYSLAVQACCKTLDLAMANSLLREMKEK 297
Query: 231 KGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEE 290
K C P+ T+ VI + +DD++ + EM GI + + T +I C+ N L
Sbjct: 298 KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 291 AIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVR 350
A+ LF M P+ +T+ LI +N ++ A + + M V+GLTP+ I++
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 351 GLCEVGKFDESVNFLEDKCGYVTSPH-----NALLECCCNAGKFFLAKCILEKMADRKIA 405
G + K +E++ ++ + T N +L C GK A +L KM R I
Sbjct: 418 GWLKGQKHEEALKLFDE--SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 406 -DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRV 464
+ S+N + C + + A + ++ + P+ TYS + G + + ++AL V
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 465 FRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCM--SKNGCSLSSSSFNILIYGL 522
+++ ++ ++ + Y ++ GLC+V + ++A E+ M K C +S S+N +I G
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIIDGF 594
Query: 523 CVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV 582
++D A+ +G S TYT +M GL K R L + +M +G LD+
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 583 EAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINK 642
AY LI +++ ++ + F+ +++ GL P + SL+ G + + K
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 643 LVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
++ D D Y LI+GL K+G AS L M G VPD + ++V
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/573 (22%), Positives = 247/573 (43%), Gaps = 39/573 (6%)
Query: 131 REALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVY 190
+E S++ + V ++ A+R+ M S G ++V ++ + + V ++
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV-LF 362
Query: 191 KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIAN 250
+M K G PN T + L+E + +E AL+ +++M G P+ +I+G +
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 251 SRVDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
+ ++++ + E F+ G+ + + C I+ LC++ K +EA L M + + P+ +
Sbjct: 423 QKHEEALKLFDESFETGLA---NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDK 368
+Y ++ C +D A + +++ GL P + + + L D
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY-----------------SILIDG 522
Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
C NAL ++ M I + + I LC+ + KA
Sbjct: 523 CFRNHDEQNALE--------------VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 428 ELLGRMVVSS-VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
ELL M+ + C +Y++ + G K + A+ + ++ + + I+Y+ L+ G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
LC+ ++ +A+E+ M G L ++ LI G C ++ A L S G + +
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
Y ++ G L L + +ML +G D+ Y LI + + L + +
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 607 VMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEG 666
M GLVPD +++GL+ Q V ++ ++ + +YN +I G ++EG
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 667 LTSQASYLLDLMLGKGWVPDATTHGLLVGSSVG 699
+A L D ML KG +PD T +LV VG
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/540 (20%), Positives = 211/540 (39%), Gaps = 43/540 (7%)
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDS 256
G N NYLL + + + A+D +M + P + L+ + + ++
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 257 VSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINC 316
+ M +G+ + ++ RE K EA+ + PD L Y +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 317 LCENLRLDDANDILEDMIVIGL-TPTDDVFVDIVRGLCEVGKFDESVNF----LEDKCGY 371
C+ L L AN +L +M L P+ + + ++ + G D+++ L D
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELL 430
+L+ C A + +KM + + ++++ I W +N E+ KA E
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
+M V + P + G K +E+AL++F + S ++ + + + ++ LC+
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQ 456
Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVD-----------KAIRLRSLAY 539
K EA E+ M G + S+N ++ G C + +D K ++ + Y
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 540 S----------------SGTSYTTST--------YTKIMLGLVKLQRAKDLLVVLAQMLV 575
S ++ TS+ Y I+ GL K+ + +LA M+
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 576 EG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
E + +Y +I ++ ++ + M G+ P+ T SL++GL +++
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+++ + LD Y LI+G K AS L +L +G P + L+
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 115 MEGLCQNMVKERYPNVRE------------ALISLVFSFVNHYRVNGAMRVLVNMNSGGF 162
M GLC+N ++ +R+ A +L+ F + A + + G
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVF---VYKEMVKAGIVPNVDTLNYLLEVLFETNRIE 219
S ++N ++ R + V +YK+M+K G+ ++ T L++ L + +
Sbjct: 686 NPSQPIYNSLISGF----RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 220 SALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCII 279
A + + M G P+ + +++ GL + V + EM + + Y +I
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 280 PMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLR 322
RE L+EA RL M ++PD T++ L++ NL+
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQ 844
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 239/524 (45%), Gaps = 12/524 (2%)
Query: 180 KRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR- 238
+R + V +++ ++ G P+ + ++ +T + ALD R M K P S+
Sbjct: 252 ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQE 311
Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMM 298
T+ VI + ++++V ++ EM GI + + T ++ C+ N+L +A+ LF M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 299 RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKF 358
L PD++ + ++ C+N+ ++ A + M + + P+ + +++G +
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 359 DESVNFLEDKC------GYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWN 411
+ ++ D G++ N + C GK A L+ M + I + +N
Sbjct: 432 EAALEIFNDSFESWIAHGFMC---NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 412 IPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQ 471
+ C + + A + M+ + P+ TYS + G K + ++A V Q++A
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 472 SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG-CSLSSSSFNILIYGLCVMRKVDK 530
+ + + Y+ ++ GLC+V + ++A E+ + K S+S +S+N +I G + D
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608
Query: 531 AIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQ 590
A+ +G S T+T ++ G K R L + +M LD+ AY LI
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 591 SMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVL 650
++N +K F+ + + GL+P+ SL+ G + ++ K+V+D
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 651 DSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
D Y +I+GL K+G + AS L +L G VPD H +LV
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 143/639 (22%), Positives = 255/639 (39%), Gaps = 92/639 (14%)
Query: 73 TNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKERYPNVRE 132
T DL AL + + + + + +TY +I+ GN+EE + MV P
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346
Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
A SLV + + A+ D+FN
Sbjct: 347 AATSLVNGYCKGNELGKAL---------------DLFN---------------------R 370
Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
M + G+ P+ + ++E + +E A++ + RM P+S +I+G +
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 253 VDDSVSILGEMFDLGIQLELSFYTC--IIPMLCRENKLEEAIRLFKMMRALDLMPDELTY 310
+ ++ I + F+ I + C I + C++ K++ A KMM + P+ + Y
Sbjct: 431 PEAALEIFNDSFESWIA---HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487
Query: 311 EELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLC----EVGKFD-----ES 361
++ C +D A I +M+ GL P + + ++ G E +D +
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547
Query: 362 VNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKM--ADRKIADCDSWNIPIRWLCE 419
NF ++ Y N ++ C G+ AK +L+ + R C S+N I +
Sbjct: 548 SNFEANEVIY-----NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 420 NEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSIS 479
+ A E M + P+ T+++ + G CK + AL + ++ + L LD +
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662
Query: 480 YSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAY 539
Y L++G C+ + A +F + + G + S +N LI G + K+D AI L
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 540 SSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
+ G S TYT ++ GL+ KD + LA L
Sbjct: 723 NDGISCDLFTYTTMIDGLL-----KDGNINLASDL------------------------- 752
Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
++ ++ G+VPD + L++GL+ Q S + ++ + +Y+ +I
Sbjct: 753 -----YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSV 698
G +EG ++A L D ML KG V D T LLV V
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRV 846
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/533 (20%), Positives = 214/533 (40%), Gaps = 43/533 (8%)
Query: 204 TLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEM 263
NYLL R++ A+D F M + P V+ L+ ++ +D++ I +M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 264 FDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRL 323
+G+ + ++ RE K EEA+++F+ + + PD L + + C+ L
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 324 DDANDILEDMI-VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTS----PHNA 378
A D+L +M +G+ + + + ++ + G +E+V +++ G+ +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 379 LLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSS 437
L+ C + A + +M + +A D +++ + W C+N E+ KA E RM
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 438 VVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAV 497
+ P + G K + E AL +F S +S + +K+ C+ K+ A
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 498 EVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGL 557
M + G + +N ++ C M+ +D A + S G TY+ ++ G
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 558 VKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSE-----------QNKLKD------ 600
K + ++ V+ QM + Y +I + + QN +K+
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 601 CALF-------------------FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGIN 641
C + + M + G P+ T SL++G +++ L +
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 642 KLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
++ S LD Y LI+G K+ A L + G +P+ + + L+
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 186/469 (39%), Gaps = 18/469 (3%)
Query: 238 RTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKM 297
R F ++ I N R+D +V G M D + + + ++ L R N ++EA ++
Sbjct: 170 RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229
Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
M + + D +T + L+ + ++A I ++ G P +F V+ C+
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289
Query: 358 FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIP---- 413
+++ L + G + P A E + F+ + +E+ A R + + + IP
Sbjct: 290 LVMALDLLREMRGKLGVP--ASQETYTSVIVAFVKEGNMEE-AVRVMDEMVGFGIPMSVI 346
Query: 414 -----IRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
+ C+ E+ KA +L RM + PD +S V CK E A+ + ++
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF--NILIYGLCVMR 526
+ + S+ +++G + E A+E+F + + S + F N + C
Sbjct: 407 KSVRIAPSSVLVHTMIQGCLKAESPEAALEIF---NDSFESWIAHGFMCNKIFLLFCKQG 463
Query: 527 KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYC 586
KVD A + G Y +ML +++ + ++ML +G + Y
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 587 ILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
ILI + ++ N M + + ++++GL Q + L+ +
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 647 SEV-LDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ + YN +I+G K G T A M G P+ T L+
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 179/439 (40%), Gaps = 14/439 (3%)
Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
+I ++ N+ VD S G +L + ++ R +++ A+ F +M
Sbjct: 147 LIPNVMVNNLVDSSKR-------FGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRK 199
Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
++P +++ L + +D+A +I M++IG+ + ++R K +E+V
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAV 259
Query: 363 NFLEDKCGYVTSPHNAL----LECCCNAGKFFLAKCILEKMADR--KIADCDSWNIPIRW 416
P L ++ C +A +L +M + A +++ I
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
+ + +A ++ MV + ++ V G CK AL +F ++ + L D
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
+ +S +VE C+ ++ +A+E + M + SS + +I G + A+ + +
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439
Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
++ S ++ KI L K + L M +G +V Y ++ +
Sbjct: 440 DSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
+ F+ M++ GL P+ T L+ G IN++ + + + +YN
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558
Query: 657 ILINGLWKEGLTSQASYLL 675
+INGL K G TS+A +L
Sbjct: 559 TIINGLCKVGQTSKAKEML 577
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 77 SSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKE-RYPNVREALI 135
S A ++ + + +KR+ + +Y +I G+ + + M + + PNV
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV-TFT 629
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVE---EKRGFADFVFVYKE 192
SL+ F R++ A+ + M S KL + + GA+++ +K ++ E
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY----GALIDGFCKKNDMKTAYTLFSE 685
Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
+ + G++PNV N L+ ++++A+D +++M G + T+ +I GL+ +
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
++ + + E+ DLGI + + ++ L ++ + +A ++ + M+ D+ P+ L Y
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805
Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCE 354
+I L++A + ++M+ G+ D VF +V G E
Sbjct: 806 VIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 162/399 (40%), Gaps = 7/399 (1%)
Query: 180 KRGFADFVFVY-KEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSR 238
K+G D + K M + GI PNV N ++ ++ A F M +KG PN+
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 239 TFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK-M 297
T+ I+I G N ++ ++ +M + Y II LC+ + +A + + +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 298 MRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK 357
++ +Y +I+ + D A + +M G +P F ++ G C+ +
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 358 FDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNI 412
D ++ + + + AL++ C A + ++ + + + +N
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 413 PIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQS 472
I ++ A +L +MV + D TY+ + G K N A ++ ++
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 473 LVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAI 532
+V D I + LV GL + + +A ++ M K + + ++ +I G +++A
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820
Query: 533 RLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
RL G + + + ++ G V+ A + LA
Sbjct: 821 RLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLA 859
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 204/447 (45%), Gaps = 34/447 (7%)
Query: 169 FNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRM 228
F+ VL I + K + + ++ M GI ++ + N ++ L +R AL +M
Sbjct: 72 FSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 130
Query: 229 HKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKL 288
K G P+ T +I G +RV D++ ++ +M ++G + ++ Y II C+ +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 289 EEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDI 348
+A+ LF M + D +TY L+ LC + R DA ++ DM++ + P F +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 349 VRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCD 408
+ + GKF E++ E+ P D
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDP------------------------------DVF 280
Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
++N I LC + + +A ++L MV +PD TY+ + G CK ++ ++FR++
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
+ + LV D+I+Y+ +++G Q + A E+F S+ + +++IL+YGLC+ +V
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRV 397
Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCIL 588
+KA+ L S +TY ++ G+ K+ +D + + +G DV +Y +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 589 IQSMSEQNKLKDCALFFNVMVKAGLVP 615
I + + L + M + GL+P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 179/362 (49%), Gaps = 7/362 (1%)
Query: 150 AMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLL 209
A+ V+ M G++ V + ++ + R F D + + +M + G P+V N ++
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF-DAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 210 EVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQ 269
+ + + A++ F RM + G ++ T+ ++ GL + R D+ ++ +M I
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 270 LELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDI 329
+ +T +I + +E K EA++L++ M + PD TY LIN LC + R+D+A +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 330 LEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED--KCGYV--TSPHNALLECCCN 385
L+ M+ G P + ++ G C+ + DE + + G V T +N +++
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 386 AGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATY 445
AG+ A+ I +M R + +++I + LC N + KA L M S + D TY
Sbjct: 362 AGRPDAAQEIFSRMDSR--PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 446 SAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSK 505
+ + G CK+ N EDA +FR +S + L D +SY+ ++ G C+ + ++ ++ M +
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Query: 506 NG 507
+G
Sbjct: 480 DG 481
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 173/420 (41%), Gaps = 33/420 (7%)
Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMI 334
++ ++ + + + I LF M + D +Y +INCLC R A ++ M+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 335 VIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKC 394
G P ++ G C+ + ++++ +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK--------------------------- 164
Query: 395 ILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
+E+M R D +N I C+ + A EL RM V D TY++ V G C
Sbjct: 165 -MEEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
+ DA R+ R + + +V + I+++ +++ + K +EA++++ M++ +
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
+N LI GLC+ +VD+A ++ L + G TY ++ G K +R + + +M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLH 634
G D Y +IQ + + F+ M P+ T LL+GL ++
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 398
Query: 635 LVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ LD + YNI+I+G+ K G A L + KG PD ++ ++
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
SL+ H RV+ A ++L M + G V +N ++ + KR + +++EM +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR-VDEGTKLFREMAQ 342
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
G+V + T N +++ F+ R ++A + F RM + PN RT+ I++ GL N RV+
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEK 399
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELIN 315
++ + M I+L+++ Y +I +C+ +E+A LF+ + L PD ++Y +I+
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 316 CLCENLRLDDANDILEDMIVIGLTP 340
C + D ++ + M GL P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 37/274 (13%)
Query: 457 NYEDALRVFRQVSAQSLVLDSI-SYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSF 515
N E+ + +F ++ QS L SI +SK++ + + + + +F M G S+
Sbjct: 49 NLEEEIDLFCKM-IQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107
Query: 516 NILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLV 575
NI+I LC + A+ + G T + ++ G + R D + ++++M
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 576 EGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL------AD 629
G DV Y +I + + D F+ M + G+ D T SL+ GL +D
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 630 GSQLH-------------LVSSGINKLVSD---SEVL-------------DSSMYNILIN 660
++L ++ I+ V + SE + D YN LIN
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 661 GLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
GL G +A +LDLM+ KG +PD T+ L+
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 493 ITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTK 552
+ E +++FC M ++ S F+ ++ + + D I L G + +Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 553 IMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAG 612
++ L + R L V+ +M+ G DV LI + N++ D + M + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 613 LVPDRETMLSLLHGLADGS-QLHLVSSGI---NKLVSDSEVLDSSMYNILINGLWKEGLT 668
PD + + + + DGS ++ LV+ + +++ D D+ YN L+ GL G
Sbjct: 170 FRPD----VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 669 SQASYLLDLMLGKGWVPDATTHGLLVGSSVGE 700
S A+ L+ M+ + VP+ T ++ V E
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 222/499 (44%), Gaps = 47/499 (9%)
Query: 75 DLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMVKER-YPNVREA 133
+L ALK+F +S + + +Y +I L G +EE GL M ++ P+ R
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 134 LISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAI-----VEEKRGFADFVF 188
+ L+ + + ++ A + M G K +V + V++ + +EE G
Sbjct: 305 TV-LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG------ 357
Query: 189 VYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLI 248
V ++MVK I P+V T N L+ + R+ A + M K+ C PN RTF +++GL
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 249 ANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDEL 308
+ +V +L M D G+ ++ Y +I LCRE + A +L M D+ PD L
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 309 TYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED- 367
T+ +IN C+ + D A+ L M+ G++ + ++ G+C+VGK +++ LE
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 368 -KCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKA 426
K +T+PH S N+ + L + ++++
Sbjct: 538 VKMRILTTPH--------------------------------SLNVILDMLSKGCKVKEE 565
Query: 427 YELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEG 486
+LG++ +VP TY+ V G + + + R+ + + + Y+ ++ G
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
LCQ ++ EA ++ M +G S + ++ +++ G K+D+A+ G
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685
Query: 547 TSTYTKIMLGLVKLQRAKD 565
Y+ ++ G V Q+ D
Sbjct: 686 DRIYSSLLQGFVLSQKGID 704
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 217/481 (45%), Gaps = 8/481 (1%)
Query: 225 FRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCR 284
+RRM G + ++ L N + + + ++ +G L+ T ++ CR
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 285 ENKLEEAIRLFKMM-RALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDD 343
L +A+++F +M + + P+ ++Y LI+ LCE RL++A + + M G P+
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 344 VFVDIVRGLCEVGKFDESVNFLED----KCGYVTSPHNALLECCCNAGKFFLAKCILEKM 399
+ +++ LC+ G D++ N ++ C + L++ C GK A + KM
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 400 A-DRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNY 458
DR ++N I C++ + A+ELL M + P+ T++ + G C++
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 459 EDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNIL 518
A+ + +++ L D +SY+ L++GLC+ + A ++ M+ +F +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 519 IYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGC 578
I C K D A L G S T T ++ G+ K+ + +D L +L ++
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 579 ALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSS 638
+ +++ +S+ K+K+ + K GLVP T +L+ GL + S
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI-TGSF 601
Query: 639 GINKLVSDSEVLDSSM-YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSS 697
I +L+ S L + Y I+INGL + G +A LL M G P+ T+ ++V
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 698 V 698
V
Sbjct: 662 V 662
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 207/504 (41%), Gaps = 47/504 (9%)
Query: 238 RTFEIVIKGLIAN-SRVDDSVSILGEMFD-----LGIQLELSFYTCIIPMLCRENKLEEA 291
R VI LI SR + + L FD G +L Y+ ++ L + + A
Sbjct: 120 RVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179
Query: 292 IRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL------------- 338
++ M A + + Y ++N LC+N + A + ++ IG
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239
Query: 339 -----------------------TPTDDVFVDIVRGLCEVGKFDESVNFL----EDKCGY 371
P + ++ GLCEVG+ +E+ E C
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299
Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELL 430
T + L++ C+ G A + ++M R + ++ + I LC + +I +A +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 431 GRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQV 490
+MV + P TY+A + G CK A + + ++ + ++++L+EGLC+V
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 491 EKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTY 550
K +AV + M NG S S+N+LI GLC ++ A +L S T+
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 551 TKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVK 610
T I+ K +A L ML +G +LD LI + + K +D +VK
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 611 AGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQ 670
++ ++ +L L+ G ++ + + K+ V Y L++GL + G +
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 671 ASYLLDLMLGKGWVPDATTHGLLV 694
+ +L+LM G +P+ + +++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIII 623
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 2/309 (0%)
Query: 390 FLAKCILEKM-ADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAF 448
FLA +M AD + + + LC+N A + +++ V D ++
Sbjct: 177 FLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSL 236
Query: 449 VLGKCKLCNYEDALRVFRQVSAQ-SLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNG 507
+LG C+ N DAL+VF +S + + +S+SYS L+ GLC+V ++ EA + M + G
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 508 CSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLL 567
C S+ ++ +LI LC +DKA L G TYT ++ GL + + ++
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 568 VVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGL 627
V +M+ + V Y LI + ++ VM K P+ T L+ GL
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 628 ADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDA 687
+ + + +++ + D YN+LI+GL +EG + A LL M PD
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 688 TTHGLLVGS 696
T ++ +
Sbjct: 477 LTFTAIINA 485
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 149/337 (44%), Gaps = 22/337 (6%)
Query: 185 DFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVI 244
D +F+ + +VK I+ +LN +L++L + +++ L +++K G P+ T+ ++
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 245 KGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLM 304
GLI + + S IL M G + YT II LC+ ++EEA +L M+ +
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 305 PDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGK------- 357
P+ +TY ++ N +LD A + + M+ G D ++ +++G K
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 358 ---------------FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADR 402
+E ++ +E G ++ L+ C G+ + +++ + +R
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Query: 403 KIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDAL 462
+ + +I + C ++ K EL+ ++ S VP ++ + G K + E A
Sbjct: 769 GVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAR 828
Query: 463 RVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
+ ++ + V++ VE L + ++ + EV
Sbjct: 829 ELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEV 865
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 197/440 (44%), Gaps = 6/440 (1%)
Query: 192 EMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANS 251
+M G+ P+ T+N +LE+ E IE A + F M +G P+S ++++++ G +
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
++ ++ L M G + + T I+ LC + AI F+ M L P+ + +
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL-----E 366
LI+ LC+ + A ++LE+M+ G P ++ GLC+ G +++
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 367 DKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
D + +++ C K A+ + +M ++ + + +++ I C+ +
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
AYEL+ M +P+ TY+A + CK +A + + + L D ++Y+ L++
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
C+ I +A+ FC M+K G NILI C +K+ ++ RL L S G
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
T TYT ++ K L M GC D Y LI + +++ + + +
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 606 NVMVKAGLVPDRETMLSLLH 625
M+ GL P T ++L +
Sbjct: 592 EAMIDRGLSPPEVTRVTLAY 611
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 197/488 (40%), Gaps = 39/488 (7%)
Query: 208 LLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLG 267
+L E R+ A+ M +G P+S T V++ + ++ + ++ EM G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
+ + S Y ++ R+ K++EA R M +PD T ++ LCEN ++ A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 328 DILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECC 383
MI +G P F ++ GLC+ G ++ LE+ P H AL++
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 384 CNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV-PDC 442
C G W KA+ L ++V S P+
Sbjct: 333 CKRG----------------------WT------------EKAFRLFLKLVRSDTYKPNV 358
Query: 443 ATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCC 502
TY++ + G CK A +F ++ Q L + +Y+ L+ G C+ A E+
Sbjct: 359 HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL 418
Query: 503 MSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQR 562
M G + ++N I LC + +A L + A+S G TYT ++ K
Sbjct: 419 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 478
Query: 563 AKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLS 622
L +M G D+ ILI + Q K+K+ F ++V GL+P +ET S
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 623 LLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKG 682
++ + L + + V DS Y LI+GL K+ + +A L + M+ +G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 683 WVPDATTH 690
P T
Sbjct: 599 LSPPEVTR 606
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 208/461 (45%), Gaps = 19/461 (4%)
Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
M++ G +P+ T +L L E + A+ FR+M G PN F +I GL
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYE 311
+ + +L EM G + + +T +I LC+ E+A RLF K++R+ P+ TY
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFD---ESVNFLEDK 368
+I C+ +L+ A + M GL P + + ++ G C+ G F E +N + D+
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 369 CGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRK 425
G++ + +NA ++ C + A +L K + AD ++ I I+ C+ +I +
Sbjct: 423 -GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
A RM + D + + C+ +++ R+F+ V + L+ +Y+ ++
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
C+ I A++ F M ++GC S ++ LI GLC VD+A +L G S
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
T + K + + +++L + + L + L++ + + K+ ALFF
Sbjct: 602 PEVTRVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFF 658
Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSD 646
+++ DR T+ + ++ SG N LV+D
Sbjct: 659 QKLLEKDSSADRVTLAAFTTACSE--------SGKNNLVTD 691
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 175/424 (41%), Gaps = 6/424 (1%)
Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVI 336
C++ +L EA+ + M+ L P +T ++ E ++ A ++ ++M V
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 337 GLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNA----LLECCCNAGKFFLA 392
G+ P + +V G GK E+ +L P NA +L C G A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 393 KCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLG 451
KM D + ++ I LC+ I++A+E+L MV + P+ T++A + G
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 452 KCKLCNYEDALRVF-RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
CK E A R+F + V + + + +Y+ ++ G C+ +K+ A +F M + G
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
+ +++ LI G C +A L +L G TY + L K RA + +L
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Query: 571 AQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADG 630
+ G D Y ILIQ +QN + FF M K G D L+
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511
Query: 631 SQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTH 690
++ +VS + Y +I+ KEG A M G VPD+ T+
Sbjct: 512 KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 571
Query: 691 GLLV 694
G L+
Sbjct: 572 GSLI 575
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 153/365 (41%), Gaps = 6/365 (1%)
Query: 338 LTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPH----NALLECCCNAGKFFLAK 393
L +V ++R E+G+ +E+V + D +P N +LE G A+
Sbjct: 143 LQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAE 202
Query: 394 CILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGK 452
+ ++M+ R + D S+ + + + +I++A L M+ +PD AT + +
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 453 CKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSS 512
C+ A+ FR++ + I+++ L++GLC+ I +A E+ M +NG +
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 513 SSFNILIYGLCVMRKVDKAIRL-RSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLA 571
+ LI GLC +KA RL L S TYT ++ G K + ++ +
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382
Query: 572 QMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGS 631
+M +G +V Y LI + N+M G +P+ T + + L S
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 632 QLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG 691
+ +NK S D Y ILI K+ +QA M G+ D +
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 692 LLVGS 696
+L+ +
Sbjct: 503 ILIAA 507
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 128 PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFV 187
PNV S++ + ++N A + M G +V+ + ++ + F
Sbjct: 356 PNV-HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG-SFGRAY 413
Query: 188 FVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGL 247
+ M G +PN+ T N ++ L + +R A + + G + T+ I+I+
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 248 IANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE 307
+ ++ +++ M G + ++ +I CR+ K++E+ RLF+++ +L L+P +
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 308 LTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED 367
TY +I+C C+ +D A +M G P + ++ GLC+ DE+ E
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 593
Query: 368 KCGYVTSP 375
SP
Sbjct: 594 MIDRGLSP 601
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 147 VNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLN 206
+N A+ MN GF+ + + N+++ A +K+ + +++ +V G++P +T
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK-MKESERLFQLVVSLGLIPTKETYT 537
Query: 207 YLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDL 266
++ + I+ AL F M + GC P+S T+ +I GL S VD++ + M D
Sbjct: 538 SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 597
Query: 267 GI------QLELSFYTC--------------------------IIPMLCRENKLEEAIRL 294
G+ ++ L++ C ++ LC E K+ A
Sbjct: 598 GLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALF 657
Query: 295 FKMMRALDLMPDELTYEELINCLCENLRLDDANDILE 331
F+ + D D +T E+ + + D+ E
Sbjct: 658 FQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTE 694
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDV--EAYCILIQSMS 593
SLA SG S + +G K + L +V A L+ L E ++++ S
Sbjct: 100 SLASESG-SMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFS 158
Query: 594 EQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSS 653
E +L + M GL P TM +L + + + +++ V DSS
Sbjct: 159 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSS 218
Query: 654 MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
Y +++ G +++G +A L M+ +G++PD T L++
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL 259
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 159/724 (21%), Positives = 279/724 (38%), Gaps = 95/724 (13%)
Query: 54 IQSLRHNLSPDHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVE 113
++ R LS +I VL S+ + F W Q ++HTA Y ++ + + +
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182
Query: 114 EMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
E Q + + E L LV + + A+ L + F+ S +N ++
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 242
Query: 174 GAIVEEKR-------------------GFADFVFVYKEMVKAG----IVPNVDTLNYLLE 210
A ++ R GF F Y + K G + V+T N++ +
Sbjct: 243 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY-SLCKVGKWREALTLVETENFVPD 301
Query: 211 VLFETNRI---------ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILG 261
+F T I E A+D RM C PN T+ ++ G + ++ +L
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 262 EMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENL 321
M G + ++ C A +L K M MP + Y LI +C +
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 322 R------LDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV--- 372
LD A +M+ G+ R LC GK++++ + + + G
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 373 -TSPHNALLECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCEN---EEIRK-- 425
TS ++ +L CNA K LA + E+M +AD ++ I + C+ E+ RK
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 426 ------------------------------AYELLGRMVVSSVVPDCATYSAFVLGKCKL 455
A EL M+ +P+ TYSA + G CK
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 456 CNYEDALRVFRQVSAQSLVLDS----------------ISYSKLVEGLCQVEKITEAVEV 499
E A ++F ++ V D ++Y L++G C+ ++ EA ++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 500 FCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVK 559
MS GC + ++ LI GLC + K+D+A +++ G T TY+ ++ K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 560 LQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
++R VL++ML CA +V Y +I + + K + +M + G P+ T
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 620 MLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLML 679
+++ G ++ + ++ S + Y +LI+ K G A LL+ M
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 680 GKGW 683
W
Sbjct: 842 QTHW 845
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 249/578 (43%), Gaps = 57/578 (9%)
Query: 122 MVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKR 181
M++ YP+ + SLV ++ + A ++L M G V+N+++G+I +K
Sbjct: 364 MMEGCYPSPK-IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 182 GF-ADFVFV----YKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPN 236
D + + Y EM+ AG+V N ++ L + E A R M +G P+
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 237 SRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFK 296
+ T+ V+ L S+++ + + EM G+ ++ YT ++ C+ +E+A + F
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 297 MMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVG 356
MR + P+ +TY LI+ + ++ AN++ E M+ G P + ++ G C+ G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 357 KFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRW 416
+ +++ I E+M C S ++P
Sbjct: 603 QVEKACQ-------------------------------IFERM-------CGSKDVP--- 621
Query: 417 LCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLD 476
+ + K Y+ +S P+ TY A + G CK E+A ++ +S + +
Sbjct: 622 --DVDMYFKQYD------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 477 SISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRS 536
I Y L++GLC+V K+ EA EV MS++G + +++ LI +++ D A ++ S
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
+ + YT+++ GL K+ + + ++ M +GC +V Y +I
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 597 KLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYN 656
K++ C M G+ P+ T L+ L + + + ++ ++ Y
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 657 ILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+I G KE + S LLD + P + + LL+
Sbjct: 854 KVIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLI 889
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 233/511 (45%), Gaps = 26/511 (5%)
Query: 146 RVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTL 205
+ A V+ M GF ++ VL + + F+ +++EM + G+V +V T
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL-LFEEMKRGGLVADVYTY 521
Query: 206 NYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFD 265
+++ + IE A F M + GC PN T+ +I + +V + + M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDE----------------LT 309
G + Y+ +I C+ ++E+A ++F+ M +PD +T
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 310 YEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES--VNFLED 367
Y L++ C++ R+++A +L+ M + G P V+ ++ GLC+VGK DE+ V
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 368 KCGYVTS--PHNALLECCCNAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
+ G+ + +++L++ + LA +L KM + A + + I LC+ +
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
+AY+L+ M P+ TY+A + G + E L + ++ ++ + + ++Y L+
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
+ C+ + A + M + ++ + +I G ++ +++ L T+
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 879
Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCAL-DVEA-YCILIQSMSEQNKLKDCA 602
S Y ++ L+K QR + L +L ++ L D + Y LI+S+ NK++
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 603 LFFNVMVKAGLVPDRETMLSLLHGLADGSQL 633
F+ M K G++P+ ++ SL+ GL S++
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 133/635 (20%), Positives = 247/635 (38%), Gaps = 109/635 (17%)
Query: 161 GFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETN---- 216
G+K + V+N ++ IV + D V +E ++ + + L VL +
Sbjct: 160 GYKHTAPVYNALVDLIVRD-----DDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNG 214
Query: 217 RIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYT 276
AL++ R+ P+ T+ +I+ + R+D + I EM ++++
Sbjct: 215 SFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 274
Query: 277 CIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAND-------- 328
C LC+ K EA+ L + + +PD + Y +LI+ LCE ++A D
Sbjct: 275 CFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT 331
Query: 329 ---------------------------ILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDES 361
+L M++ G P+ +F +V C G +
Sbjct: 332 SCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391
Query: 362 VNFLED--KCGYVTS--PHNALL------------------------------------- 380
L+ KCG++ +N L+
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 381 ----ECCCNAGKFFLAKCILEKMADRK-IADCDSWNIPIRWLCENEEIRKAYELLGRMVV 435
C C+AGK+ A ++ +M + I D +++ + +LC ++ A+ L M
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 436 SSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITE 495
+V D TY+ V CK E A + F ++ + ++Y+ L+ + +K++
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 496 AVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSS-------------- 541
A E+F M GC + +++ LI G C +V+KA ++ S
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 542 --GTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLK 599
TY ++ G K R ++ +L M +EGC + Y LI + + KL
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 600 DCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILI 659
+ M + G T SL+ + L S ++K++ +S + +Y +I
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 660 NGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+GL K G T +A L+ +M KG P+ T+ ++
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 11/343 (3%)
Query: 200 PNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSI 259
PNV T LL+ +++R+E A M +GC PN ++ +I GL ++D++ +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 260 LGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE 319
EM + G L Y+ +I + + + A ++ M P+ + Y E+I+ LC+
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 320 NLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP---- 375
+ D+A +++ M G P + ++ G +GK + + LE +P
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 376 HNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCE--NEEIRKAYELLGRM 433
+ L++ CC G +A +LE+M K + R + E N+E ++ LL +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEM---KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Query: 434 VVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVS--AQSLVLDSISYSKLVEGLCQVE 491
P + Y + K E ALR+ +V+ + +LV S +Y+ L+E LC
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRL 534
K+ A ++F M+K G SF LI GL K+ +A+ L
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/525 (19%), Positives = 212/525 (40%), Gaps = 71/525 (13%)
Query: 109 AGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDV 168
AG E+ + + M+ + + ++ N ++ A + M GG V
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 169 FNVVL-----GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALD 223
+ +++ ++E+ R + + EM + G PNV T L+ + ++ A +
Sbjct: 521 YTIMVDSFCKAGLIEQARKW------FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 224 QFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMF----------------DLG 267
F M +GC PN T+ +I G +V+ + I M D
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 268 IQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDAN 327
+ + Y ++ C+ +++EEA +L M P+++ Y+ LI+ LC+ +LD+A
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 328 DILEDMIVIGL-----------------------------------TPTDDVFVDIVRGL 352
++ +M G P ++ +++ GL
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 353 CEVGKFDESVNFL----EDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKIA-DC 407
C+VGK DE+ + E C + A+++ GK +LE+M + +A +
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 408 DSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQ 467
++ + I C+N + A+ LL M + A Y + G K + ++L + +
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDE 872
Query: 468 VSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL--SSSSFNILIYGLCVM 525
+ Y L++ L + +++ A+ + ++ +L SS++N LI LC+
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 932
Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
KV+ A +L S G ++ ++ GL + + + L++L
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 44/211 (20%)
Query: 89 QKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNM-VKERYPNVREALISLVFSFVNHYRV 147
+K Q TY MI G+ G +E L + M K PN + ++H
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV-----LIDHCCK 826
Query: 148 NGAMRVLVNM-----------NSGGFKLSVDVFNV----VLGAIVE-EKRGFADFVFVYK 191
NGA+ V N+ ++ G++ ++ FN LG + E + A F+ VY+
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886
Query: 192 EMV----------------------KAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMH 229
++ A +V T N L+E L N++E+A F M
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 230 KKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
KKG P ++F +IKGL NS++ +++ +L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 11/233 (4%)
Query: 99 YCKMILKLGLAGNVEEMEGLCQNMVKER--YPNVREALISLVFSFVNHYRVNGAMRVLVN 156
Y +MI L G +E L Q M++E+ PNV +++ F ++ + +L
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQ-MMEEKGCQPNVV-TYTAMIDGFGMIGKIETCLELLER 804
Query: 157 MNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVL-FET 215
M S G + + V++ K G D E +K P T Y + F
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCC--KNGALDVAHNLLEEMKQTHWPT-HTAGYRKVIEGFNK 861
Query: 216 NRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL--ELS 273
IES L + + P + ++I LI R++ ++ +L E+ L S
Sbjct: 862 EFIES-LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 274 FYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDA 326
Y +I LC NK+E A +LF M ++P+ ++ LI L N ++ +A
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 206/440 (46%), Gaps = 8/440 (1%)
Query: 183 FADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEI 242
F D + ++ +M ++ +P++ + LL + + N+ E+ + FR + G + +F
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 243 VIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALD 302
+I +R+ ++S LG+M LG + + + ++ C N+ EA+ L + L
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 303 LMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESV 362
P+ + Y +I+ LCE +++ A D+L+ M +G+ P + ++ L G + S
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 363 NFLEDKCGYVTSP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWL 417
L D SP +AL++ G+ AK +M R + + ++N I L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 418 CENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDS 477
C + + +A ++L +V P+ TY+ + G CK +D +++ +S + D+
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 478 ISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKA-IRLRS 536
+Y+ L +G CQ K + A +V M G +FNIL+ GLC K+ KA +RL
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 537 LAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQN 596
L S T TY I+ GL K + +D + + ++G + DV Y ++ + +
Sbjct: 420 LQ-KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478
Query: 597 KLKDCALFFNVMVKA-GLVP 615
++ + M K GL+P
Sbjct: 479 LWREAHELYRKMQKEDGLMP 498
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 181/378 (47%), Gaps = 6/378 (1%)
Query: 133 ALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKE 192
+ +L+ F R++ A+ L M GF+ S+ F ++ R F + + + +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR-FYEAMSLVDQ 174
Query: 193 MVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSR 252
+V G PNV N +++ L E ++ +ALD + M K G P+ T+ +I L +
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 253 VDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEE 312
S IL +M +GI ++ ++ +I + +E +L EA + + M + P+ +TY
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294
Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFL----EDK 368
LIN LC + LD+A +L ++ G P + ++ G C+ + D+ + L D
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Query: 369 CGYVTSPHNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAY 427
T +N L + C AGKF A+ +L +M + D ++NI + LC++ +I KA
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGL 487
L + S V TY+ + G CK EDA +F ++ + + D I+Y ++ GL
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Query: 488 CQVEKITEAVEVFCCMSK 505
+ EA E++ M K
Sbjct: 475 RRKRLWREAHELYRKMQK 492
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 185/439 (42%), Gaps = 30/439 (6%)
Query: 252 RVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYE 311
+ +D++++ +M + + ++ ++ + + NK E I LF+ + L + D ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 312 ELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGY 371
LI+C C RL A L M+ +G P+ F +V G C V +F E+++ ++ G
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 372 VTSPHNALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLG 431
P+ + +N I LCE ++ A ++L
Sbjct: 179 GYEPNVVI------------------------------YNTIIDSLCEKGQVNTALDVLK 208
Query: 432 RMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVE 491
M + PD TY++ + + + R+ + + D I++S L++ +
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Query: 492 KITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYT 551
++ EA + + M + + + ++N LI GLC+ +D+A ++ ++ S G TY
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 552 KIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKA 611
++ G K +R D + +L M +G D Y L Q + K MV
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 612 GLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
G+ PD T LL GL D ++ + L V+ YNI+I GL K A
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 672 SYLLDLMLGKGWVPDATTH 690
YL + KG PD T+
Sbjct: 449 WYLFCSLALKGVSPDVITY 467
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%)
Query: 426 AYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVE 485
A L M S +P +S ++ KL YE + +FR + + D S++ L++
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 486 GLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSY 545
C+ +++ A+ M K G S +F L+ G C + + +A+ L G
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 546 TTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFF 605
Y I+ L + + L VL M G DV Y LI + A
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 606 NVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
+ M++ G+ PD T +L+ QL N+++ S + YN LINGL
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 666 GLTSQASYLLDLMLGKGWVPDATTHGLLV 694
GL +A +L++++ KG+ P+A T+ L+
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 35/288 (12%)
Query: 406 DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVF 465
D S+ I C + A LG+M+ P T+ + V G C + + +A+ +
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 466 RQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVM 525
Q+ + + Y+ +++ LC+ ++ A++V M K G ++N LI L
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL--- 229
Query: 526 RKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAY 585
+ SGT ++ +L+ M+ G + DV +
Sbjct: 230 -------------FHSGTWGVSAR-------------------ILSDMMRMGISPDVITF 257
Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
LI ++ +L + +N M++ + P+ T SL++GL L +N LVS
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Query: 646 DSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLL 693
++ YN LING K +L +M G D T+ L
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 210/466 (45%), Gaps = 27/466 (5%)
Query: 137 LVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKA 196
LV ++ N+ R G+KLS ++ A+++E R AD +VYKEM++
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRS-ADVEYVYKEMIRR 217
Query: 197 GIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKG---LIANSRV 253
I PNV T N ++ L +T ++ A D M GC PN ++ +I G L N ++
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 254 DDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEEL 313
+ ++L EM + + L+ + +I +++ L ++++FK M D+ P+ ++Y L
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 314 INCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVT 373
IN LC ++ +A + + M+ G+ P + ++ G C+ E+++ G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 374 SP----HNALLECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYE 428
P +N L++ C GK + E+M I D ++N I LC N I A +
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 429 LLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLC 488
L ++ S +PD T+ + G C+ A + +++S L ++Y+ +++G C
Sbjct: 458 LFDQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 489 QVEKITEAVEVFCCMSK-NGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTT 547
+ + A + M K ++ +S+N+L+ G K++ A L + G
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 548 STYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMS 593
TY +V +M+ +G D+E + + + S
Sbjct: 577 ITYE----------------IVKEEMVDQGFVPDIEGHLFNVSTKS 606
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 191/414 (46%), Gaps = 10/414 (2%)
Query: 215 TNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSF 274
+R E + F+R G ++ + + ++ L+ +R D + EM IQ +
Sbjct: 166 NSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFT 225
Query: 275 YTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCE---NLRLDDANDILE 331
+ +I LC+ K+ +A + + M+ P+ ++Y LI+ C+ N ++ A+ +L+
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 332 DMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSP----HNALLECCCNAG 387
+M+ ++P F ++ G + S+ ++ P +N+L+ CN G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 388 KFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYS 446
K A + +KM + + ++N I C+N+ +++A ++ G + VP Y+
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 447 AFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKN 506
+ CKL +D + ++ + +V D +Y+ L+ GLC+ I A ++F ++
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 507 GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDL 566
G +F+IL+ G C + KA L G TY +M G K K
Sbjct: 466 GLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 567 LVVLAQMLVEG-CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRET 619
+ QM E ++V +Y +L+Q S++ KL+D + N M++ GLVP+R T
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 193/407 (47%), Gaps = 16/407 (3%)
Query: 313 LINCLCENLRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYV 372
+I L EN R D + ++MI + P F ++ LC+ GK +++ + +ED Y
Sbjct: 195 MIALLKEN-RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 373 TSP----HNALLECCC---NAGKFFLAKCILEKMADRKIA-DCDSWNIPIRWLCENEEIR 424
SP +N L++ C GK + A +L++M + ++ + ++NI I +++ +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 425 KAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLV 484
+ ++ M+ V P+ +Y++ + G C +A+ + ++ + + + I+Y+ L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 485 EGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTS 544
G C+ + + EA+++F + G ++ +N+LI C + K+D L+ G
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 545 YTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALF 604
TY ++ GL + + + Q+ +G D+ + IL++ + + + A+
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAML 492
Query: 605 FNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEV-LDSSMYNILINGLW 663
M K GL P T ++ G L ++ ++ + + ++ + YN+L+ G
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 664 KEGLTSQASYLLDLMLGKGWVPDATTHGLLVGSSVGEEIDSRRFAFD 710
++G A+ LL+ ML KG VP+ T+ + V EE+ + F D
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEI-----VKEEMVDQGFVPD 594
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 460 DALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILI 519
D V++++ + + + +++ ++ LC+ K+ +A +V M GCS + S+N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 520 YGLCVMR---KVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVE 576
G C + K+ KA + + S +T+ ++ G K + V +ML +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 577 GCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLV 636
+V +Y LI + K+ + + MV AG+ P+ T +L++G L
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 637 SSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHG-LLVG 695
+ V + MYN+LI+ K G L + M +G VPD T+ L+ G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 696 SSVGEEIDSRRFAFD---SSSFPDSVS-DILAEG 725
I++ + FD S PD V+ IL EG
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEG 479
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 146/634 (23%), Positives = 261/634 (41%), Gaps = 40/634 (6%)
Query: 44 SHQTTDYEAKIQSLRHNLSPD-----HLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADT 98
S +++D+ + +R + PD + R L + D S+ FK V+ HT +T
Sbjct: 63 SMKSSDFSGSM--IRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTET 120
Query: 99 YCKMILKLGLAGNVEEMEGLCQNMVKERYPNVREALISLVFSFVNHYRVNGAMRVLVNMN 158
M+ L + G +EEM + M K +++ S + A L M
Sbjct: 121 CNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR 180
Query: 159 SGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRI 218
GF L+ +N ++ +++ R + + VY+ M+ G P++ T + L+ L + I
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKS-RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 219 ESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCI 278
+S + + M G PN TF I I+ L +++++ IL M D G ++ YT +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 279 IPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGL 338
I LC KL+ A +F+ M+ PD +TY L++ +N LD +M G
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 339 TPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEK 398
P F +V LC+ G F E+ + L+
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFD-------------------------------TLDV 388
Query: 399 MADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCN 457
M D+ I + ++N I L + A EL G M V P TY F+ K +
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 458 YEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNI 517
AL F ++ + + + ++ + + L + + EA ++F + G S ++N+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 518 LIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEG 577
++ + ++D+AI+L S +G ++ L K R + + +M
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 578 CALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVS 637
V Y L+ + + K+++ F MV+ G P+ T +L L ++ L
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 638 SGINKLVSDSEVLDSSMYNILINGLWKEGLTSQA 671
+ K++ V D YN +I GL K G +A
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/565 (21%), Positives = 245/565 (43%), Gaps = 12/565 (2%)
Query: 136 SLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVK 195
SL+ + RV+ A ++ + M K +V +N +L + + + + + +++ MV+
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK-IQEAIELFEGMVQ 601
Query: 196 AGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDD 255
G PN T N L + L + + + AL +M GC P+ T+ +I GL+ N +V +
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 256 SVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLF-KMMRALDLMPDELTYEELI 314
++ +M L + + ++P + + + +E+A ++ + P L +E+LI
Sbjct: 662 AMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Query: 315 NCLCENLRLDDANDILEDMIVIGL-TPTDDVFVDIVRGLCEVGKFDESVN----FLEDKC 369
+ +D+A E ++ G+ D + V I+R C+ + F +D
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 370 GYVTSP-HNALLECCCNAGKFFLAK-CILEKMADRKIADCDSWNIPIRWLCENEEIRKAY 427
P +N L+ A +A+ L+ + I D ++N + ++ +I + +
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 428 ELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV-SAQSLVLDSISYSKLVEG 486
EL M + T++ + G K N +DAL ++ + S + + +Y L++G
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 487 LCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYT 546
L + ++ EA ++F M GC + + +NILI G + D A L G
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 547 TSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFN 606
TY+ ++ L + R + L ++ G DV Y ++I + + ++L++ + FN
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 607 VM-VKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKE 665
M G+ PD T SL+ L + N++ + +N LI G
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 666 GLTSQASYLLDLMLGKGWVPDATTH 690
G A + M+ G+ P+ T+
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 148/687 (21%), Positives = 283/687 (41%), Gaps = 81/687 (11%)
Query: 53 KIQSLRHNLSPDHL--IRVLDNTNDLSSALKIFKWVSIQKRFQHTAD--TYCKMILKLGL 108
K+++ RH PD + I +LD +D + ++ S ++ H D T+ ++ L
Sbjct: 318 KMKTGRH--KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 109 AGNVEEMEGLCQNMVKER-YPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVD 167
AGN E M + PN+ +L+ + +R++ A+ + NM S G K +
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNL-HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 168 VFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR 227
+ V + + + +++M GI PN+ N L L + R A F
Sbjct: 435 TYIVFIDYYGKSGDSVSALE-TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 228 MHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENK 287
+ G P+S T+ +++K +D+++ +L EM + G + ++ +I L + ++
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 288 LEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTDDVFVD 347
++EA ++F M+ + L P +TY L+ L +N ++ +A ++ E M+ G P F
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF-- 611
Query: 348 IVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCILEKMADRK-IAD 406
N L +C C + LA +L KM D + D
Sbjct: 612 -----------------------------NTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Query: 407 CDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFR 466
++N I L +N ++++A +M V PD T + G K EDA ++
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 467 Q--------------------VSAQSLVLDSISYSK--LVEGLCQ-VEKITEAVEVFCCM 503
+ A++ + +++S+S+ + G+C+ + I + + C
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK 761
Query: 504 SKN---------------GCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTS 548
N G ++N+LI GL ++ A + S+G +
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 549 TYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCA-LFFNV 607
TY ++ K + +L + +M C + + I+I + + + D L++++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 608 MVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGL 667
M P T L+ GL+ +L+ ++ + ++YNILING K G
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 668 TSQASYLLDLMLGKGWVPDATTHGLLV 694
A L M+ +G PD T+ +LV
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLV 968
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 119/570 (20%), Positives = 223/570 (39%), Gaps = 83/570 (14%)
Query: 64 DHLIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEEMEGLCQNMV 123
+ LI L + + A K+F + + + + T TY ++ LG G ++E L + MV
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMK-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 124 KERYPNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVLGAIVEEKRGF 183
++ P +L + V A+++L M G V +N ++ +V K G
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV--KNGQ 658
Query: 184 ADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRR-MHKKGCCPNSRTFEI 242
+ +K + P+ TL LL + + + IE A ++ P + +E
Sbjct: 659 VKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWED 718
Query: 243 VIKGLIANSRVDDSVSI-----------------------------------LGEMF--D 265
+I ++A + +D++VS L E F D
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 266 LGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDD 325
LG+Q +L Y +I L + +E A +F +++ +PD TY L++ ++ ++D+
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 326 ANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLED-----KCGYVTSPHNALL 380
++ ++M ++ GL + G D++++ D + L+
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 381 ECCCNAGKFFLAKCILEKMADRKI-ADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVV 439
+ +G+ + AK + E M D +C +NI I + E A L RMV V
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 440 PDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEV 499
PD TYS V C + ++ L F+++ L D + Y+ ++ GL + ++ EA+ +
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 500 FCCM------------------------------------SKNGCSLSSSSFNILIYGLC 523
F M + G + +FN LI G
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 524 VMRKVDKAIRLRSLAYSSGTSYTTSTYTKI 553
+ K + A + + G S T TY ++
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 15/280 (5%)
Query: 421 EEIRKAYELLGRMVVSSVVPDCATY-----SAFVLGKCKLCNYEDALRVFRQVSAQSLVL 475
EE+ ++L+ + ++ D TY S V G K Y ALR R+ VL
Sbjct: 135 EEMAYVFDLMQKRIIKR---DTNTYLTIFKSLSVKGGLKQAPY--ALRKMREFG---FVL 186
Query: 476 DSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLR 535
++ SY+ L+ L + TEA+EV+ M G S +++ L+ GL R +D + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 536 SLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQ 595
+ G T+T + L + + + +L +M EGC DV Y +LI ++
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 596 NKLKDCAL-FFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSM 654
KL DCA F M PDR T ++LL +D L V +++ D V D
Sbjct: 307 RKL-DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 655 YNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
+ IL++ L K G +A LD+M +G +P+ T+ L+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 141/323 (43%), Gaps = 19/323 (5%)
Query: 409 SWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCKLCNYEDALRVFRQV 468
S+N I L ++ +A E+ RM++ P TYS+ ++G K + + + + +++
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 469 SAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSSFNILIYGLCVMRKV 528
L + +++ + L + KI EA E+ M GC ++ +LI LC RK+
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 529 DKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVV---LAQMLVEGCALDVEAY 585
D A + + TY + L + +DL V ++M +G DV +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITL---LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 586 CILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHGLADGSQLHLVSSGINKLVS 645
IL+ ++ + + +VM G++P+ T +L+ GL ++H + + +L
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL---RVHRLDDAL-ELFG 422
Query: 646 DSEVLD----SSMYNILINGLWKEGLTSQASYLLDLMLGKGWVPD--ATTHGLLVGSSVG 699
+ E L + Y + I+ K G + A + M KG P+ A L + G
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 700 EEIDSRRFAF---DSSSFPDSVS 719
+ ++++ + D PDSV+
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVT 505
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 217/472 (45%), Gaps = 15/472 (3%)
Query: 163 KLSVDVFNVVLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESAL 222
K S+ VF++++ +E F + ++V +EM P+ +L L R +S
Sbjct: 129 KFSIGVFSLLIMEFLEMGL-FEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVW 184
Query: 223 DQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPML 282
++ M +G P+ + ++ + +L EM LGI+ + YT I L
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244
Query: 283 CRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDILEDMIVIGLTPTD 342
CR+NK+EEA ++F++M+ ++P+ TY +I+ C+ + A + ++++V L P
Sbjct: 245 CRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 343 DVFVDIVRGLCEVGK-------FDESVNFLEDKCGYVTSPHNALLECCCNAGKFFLAKCI 395
VF +V G C+ + F V F D YV +N L+ C +G A +
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV---YNCLIHGHCKSGNMLEAVGL 361
Query: 396 LEKMADRKIA-DCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVLGKCK 454
L +M ++ D ++ I I LC +++ +A L +M + P ATY++ + G CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 455 LCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSLSSSS 514
N E AL + +++A + + I++S L++G C V I A+ ++ M+ G +
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 515 FNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQML 574
+ LI + +A+RL S +G T+ ++ G K R + +
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 575 VEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG 626
+ + + LI+ + + + + FF+ M G+ PD + +S+L G
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/501 (20%), Positives = 205/501 (40%), Gaps = 33/501 (6%)
Query: 201 NVDTLNYLLEVLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSIL 260
++ + L+ E E AL R M C P+S+ ++ GL+ R D
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDY 187
Query: 261 GEMFDLGIQLELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCEN 320
M G+ ++ Y + ++ + +L M +L + P+ Y I LC +
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 321 LRLDDANDILEDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALL 380
++++A + E M G+ P + ++ G C+ G ++ +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK-------------- 293
Query: 381 ECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVP 440
E + + + + + C+ E+ A L MV V P
Sbjct: 294 ----------------EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337
Query: 441 DCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVF 500
+ Y+ + G CK N +A+ + ++ + +L D +Y+ L+ GLC +++ EA +F
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 501 CCMSKNGCSLSSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKL 560
M SS+++N LI+G C +++A+ L S +SG T++ ++ G +
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457
Query: 561 QRAKDLLVVLAQMLVEGCALDVEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETM 620
+ K + + +M ++G DV Y LI + ++ +K+ ++ M++AG+ P+ T
Sbjct: 458 RDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Query: 621 LSLLHGLADGSQLHLVSSGINKLVSDSEVLDSSMYNILINGLWKEGLTSQASYLLDLMLG 680
L+ G +L + + + + LI GL + G +AS M
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 681 KGWVPDATTHGLLVGSSVGEE 701
G PD ++ ++ + E+
Sbjct: 578 CGITPDICSYVSMLKGHLQEK 598
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 186/427 (43%), Gaps = 33/427 (7%)
Query: 152 RVLVNMNSGGFKLSVDVFNV-VLGAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLE 210
++L M S G K +V ++ + +L + K A+ +F + M K G++PN+ T + +++
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF--ELMKKHGVLPNLYTYSAMID 277
Query: 211 VLFETNRIESALDQFRRMHKKGCCPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQL 270
+T + A ++ + PN F ++ G + + S+ M G+
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337
Query: 271 ELSFYTCIIPMLCRENKLEEAIRLFKMMRALDLMPDELTYEELINCLCENLRLDDANDIL 330
L Y C+I C+ + EA+ L M +L+L PD TY LIN LC ++ +AN +
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 331 EDMIVIGLTPTDDVFVDIVRGLCEVGKFDESVNFLEDKCGYVTSPHNALLECCCNAGKFF 390
+ M + P+ + ++ G C+ +++++ + P
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP--------------- 442
Query: 391 LAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVSSVVPDCATYSAFVL 450
+ +++ I C +I+ A L M + +VPD TY+A +
Sbjct: 443 ---------------NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 451 GKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEKITEAVEVFCCMSKNGCSL 510
K N ++ALR++ + + + +++ LV+G + +++ A++ + ++
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 511 SSSSFNILIYGLCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVL 570
+ F LI GLC + +A R S S G + +Y ++ G ++ +R D +++
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQ 607
Query: 571 AQMLVEG 577
M+ G
Sbjct: 608 CDMIKTG 614
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 60 NLSPDH-----LIRVLDNTNDLSSALKIFKWVSIQKRFQHTADTYCKMILKLGLAGNVEE 114
NLSPD LI L + ++ A ++F+ + ++ F +A TY +I N+E+
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA-TYNSLIHGYCKEYNMEQ 427
Query: 115 MEGLCQNMVKERY-PNVREALISLVFSFVNHYRVNGAMRVLVNMNSGGFKLSVDVFNVVL 173
LC M PN+ +L+ + N + AM + M G V + ++
Sbjct: 428 ALDLCSEMTASGVEPNII-TFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 174 GAIVEEKRGFADFVFVYKEMVKAGIVPNVDTLNYLLEVLFETNRIESALDQFRRMHKKGC 233
A +E + + +Y +M++AGI PN T L++ ++ R+ A+D ++ +++
Sbjct: 487 DAHFKEA-NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 234 CPNSRTFEIVIKGLIANSRVDDSVSILGEMFDLGIQLELSFYTCIIPMLCRENKLEEAIR 293
C N F +I+GL N + + +M GI ++ Y ++ +E ++ + +
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605
Query: 294 LFKMMRALDLMPDEL 308
L M ++P+ L
Sbjct: 606 LQCDMIKTGILPNLL 620
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 141/358 (39%), Gaps = 60/358 (16%)
Query: 377 NALLECCCNAGKFFLAKCILEKMADRKIADCDSWNIPIRWLCENEEIRKAYELLGRMVVS 436
+A++ A K+ LA+C+++ + +R + N+ R E+I+ +G
Sbjct: 79 SAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIG----- 133
Query: 437 SVVPDCATYSAFVLGKCKLCNYEDALRVFRQVSAQSLVLDSISYSKLVEGLCQVEK---- 492
+S ++ ++ +E+AL V R++ DS + ++ GL + +
Sbjct: 134 -------VFSLLIMEFLEMGLFEEALWVSREMKCSP---DSKACLSILNGLVRRRRFDSV 183
Query: 493 -----------ITEAVEVF-----CC---------------MSKNGCSLSSSSFNILIYG 521
+ V ++ CC M+ G + + I I
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILD 243
Query: 522 LCVMRKVDKAIRLRSLAYSSGTSYTTSTYTKIMLGLVKLQRAKDLLVVLAQMLVEGCALD 581
LC K+++A ++ L G TY+ ++ G K + + ++LV +
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 582 VEAYCILIQSMSEQNKLKDCALFFNVMVKAGLVPDRETMLSLLHG-LADGSQLHLVSSGI 640
V + L+ + +L F MVK G+ P+ L+HG G+ L V
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG--- 360
Query: 641 NKLVSDSEVLDSS----MYNILINGLWKEGLTSQASYLLDLMLGKGWVPDATTHGLLV 694
L+S+ E L+ S Y ILINGL E ++A+ L M + P + T+ L+
Sbjct: 361 --LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 249,259,093
Number of Sequences: 539616
Number of extensions: 10129043
Number of successful extensions: 32786
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 24468
Number of HSP's gapped (non-prelim): 2783
length of query: 729
length of database: 191,569,459
effective HSP length: 125
effective length of query: 604
effective length of database: 124,117,459
effective search space: 74966945236
effective search space used: 74966945236
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)